MELO3C002022 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002022
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptiontRNA pseudouridine(55) synthase
Locationchr12 : 25687940 .. 25690445 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGAACCCCCCATGTCGAAGTTCAGCCATTTCCTCTAAAACTTCGTCTCTCAAGATTTCGGCTCTTTTTGGAGAAAACCATCTGGCAGTTCAGCCATGTCGAAGCACAGCAGCAAGTCATCGGCTGTTAGTTCCGACGAACAGCCGCCAAAGGAAGTTGCTGACTTTATGATCAAGCCTCAAAGTTTTACTCCTCCGGTCGACACCTCTCAATGGCCTATTCTTCTGAAAAACTACGACCGTCTTAATGTACGTACTGGTCATTACACTCCATTGCCGTCTGGTTATTTGCCTCTCAAACGGCCTCTTGCTGAGTATATCAGGTATGGCATTCTCAATCTTGATAAACCAGCGAATCCTTCTTCGCATGAAGTTGTGGCTTGGATTAAGCGGATTCTTCGGGTTGATAAAACCGGTCATAGTGGTACTCTCGATCCGAAGGTTACTGGGAACCTGATTGTGTGCATTGATCGAGCCACGCGGCTAGTGAAATCGCAACAGGGTGCAGGTAAAGAGTACGTGTGTGTTGCTCGGTTGCATTCTGCTGTGCCCGATGTTTCTAAGGTTGCTCGGGCTCTGGAGACGCTCACTGGGGCTGTGTTTCAGAGGCCACCGTTGATATCTGCTGTGAAAAGACAGCTTAGGATTAGAACTATATATGAAAGCAAGCTTCTTGAGTATGATGCTGAGAAACATTTGGTTGTGTTTTGGATTTCTTGTGAAGCGGGAACTTACGTTAGGACGTTATGCGTACACTTGGGTTTGATTCTTGGCGTTGGAGGGCATATGCAGGAGCTTAGAAGGGTGAGATCTGGGATTTTGGGTGAGAAGGATAACATGGTTACAATGCATGATGTGATGGATGCTCAATGGGTTTATGATAATTTCAAGGATGAAAGCTATCTGAGGAGGGTAATTATGCCTCTTGAGGTTGTTTTGACGAGCTATAAAAGATTGGTTGTCAAGGATTCTGCTGTTAATGCTATTTGTTATGGTGCGAAGTTGATGATTCCAGGGCTGTTGAGATTTGAAAACGATATTGGTGTTGGGGAAGAAGTTGTACTTATGACTACCAAAGGTGAAGCTATTGCTCTTGGTATTGCAGAGATGACTACTGCAGTGATGGCAACTTGTGACCATGGTGTTGTAGCGAAGATCAAAAGGGTTGTGATGGATCGAGATACTTACCCAAGAAAGTGGGGATTAGGTCCGAGGGCATCAATGAAGAAAAAACATTATTGGGGAAGGGAAGTTGGACAAGCATGGAAAACCAAATGAGAACACTCCTCAGGAATGGCTGAGGAATTTGGTTTTACCCACTGGTGGGGACTTTTTGGTTGCAAGTGCTTTCGCTACCGAATCCGCAACTGCTAAGCCTACTGCTGCAGAAGAGTCAGGAAAAGATGACGGAGGGCGGAAGCGAAAACTAGATGAAGATACTGAAGCTGCTCCAGCTAAGAAACTGAAGACTGAGGAAGTTGAAGAAGTCGGGAAGAAAGAAAAGAAGAAAAAGAAGAAAGACAAGGAGAAGGGTACAGCAGAAGAACCTTCTAATGAGGAGATTGTTGAGTATTCAGAGAAGAAGAAAAAGAAGAAGGACAAAGAAGCTAAAGAAGCAGGTACACCTGAGACACCGAAGTCCGAGAAGAAAAAGAAAAAGAAAGATAAGGAGTCTGGAAATGATGATTCTCAATTACCTGCTGCTGATGTTCAAAATGGTGAAGCACATGATCACGATGATGGAAGTGAGAAGAAAAAGAAGAAGAAAAAGAAGAAGAATAAAGAAGATGCTGAAGAATAAGATGATCACATTCTACTTTATATTTGGGTAACTCTGATTGTATGGCCATCTATTTCAGTTTCTAGATTTTGCGAGTTCTTTTATTATGTGCTTCCTGTAGAATTTTTGTTTCAACATTTCGACTAAAAAATGTAGGCTTTTCGATTCTCCAAATCTTCCTTCCTATACCTTATTTATTTATTTCAACTTTTGCAAGCTGATGATAATGTTAGTGATGATATGCACCATAGTTTCCCAAGGTAAAATTCCCAGCTCCAATTTTGACTTGCAAGTTGATGTAAATTTAAATTACACATTCTTTTGCAGATGAAAGTTGATGCATGGTGAGCGTACTTGGTAACACCTCTAGGCTCTATTAAGACTGTAATGTTTGTTATGTGCAACAATACTCCATTAAAGAACTGATAAGTGGAAGCAGTTGATATCCAATTAACGATCTGTTGAGTATCCAAATATAAATCCAATGGCCTTGACTTCAACGAGGACATTACTCTTGGAAAGTTGGATTATCCTAAAGGTCTCCACTGTTAGGTTGGTGATCGATTCGATCACCAAAAACAAATGACTATAAAAATTGAAGCATTGTTTTCTATGTCTTTCCTAGTAGATTTGAAGACTGGATATCCATTTTTAGAAGTTTTTGAGAATGTGTTCGATACTTTTTTTCCAAAAGAATAAACATGAAATTCTTTGTATAGCCTTTCA

mRNA sequence

ACTGAACCCCCCATGTCGAAGTTCAGCCATTTCCTCTAAAACTTCGTCTCTCAAGATTTCGGCTCTTTTTGGAGAAAACCATCTGGCAGTTCAGCCATGTCGAAGCACAGCAGCAAGTCATCGGCTGTTAGTTCCGACGAACAGCCGCCAAAGGAAGTTGCTGACTTTATGATCAAGCCTCAAAGTTTTACTCCTCCGGTCGACACCTCTCAATGGCCTATTCTTCTGAAAAACTACGACCGTCTTAATGTACGTACTGGTCATTACACTCCATTGCCGTCTGGTTATTTGCCTCTCAAACGGCCTCTTGCTGAGTATATCAGGTATGGCATTCTCAATCTTGATAAACCAGCGAATCCTTCTTCGCATGAAGTTGTGGCTTGGATTAAGCGGATTCTTCGGGTTGATAAAACCGGTCATAGTGGTACTCTCGATCCGAAGGTTACTGGGAACCTGATTGTGTGCATTGATCGAGCCACGCGGCTAGTGAAATCGCAACAGGGTGCAGGTAAAGAGTACGTGTGTGTTGCTCGGTTGCATTCTGCTGTGCCCGATGTTTCTAAGGTTGCTCGGGCTCTGGAGACGCTCACTGGGGCTGTGTTTCAGAGGCCACCGTTGATATCTGCTGTGAAAAGACAGCTTAGGATTAGAACTATATATGAAAGCAAGCTTCTTGAGTATGATGCTGAGAAACATTTGGTTGTGTTTTGGATTTCTTGTGAAGCGGGAACTTACGTTAGGACGTTATGCGTACACTTGGGTTTGATTCTTGGCGTTGGAGGGCATATGCAGGAGCTTAGAAGGGTGAGATCTGGGATTTTGGGTGAGAAGGATAACATGGTTACAATGCATGATGTGATGGATGCTCAATGGGTTTATGATAATTTCAAGGATGAAAGCTATCTGAGGAGGGTAATTATGCCTCTTGAGGTTGTTTTGACGAGCTATAAAAGATTGGTTGTCAAGGATTCTGCTGTTAATGCTATTTGTTATGGTGCGAAGTTGATGATTCCAGGGCTGTTGAGATTTGAAAACGATATTGGTGTTGGGGAAGAAGTTGTACTTATGACTACCAAAGGTGAAGCTATTGCTCTTGGTATTGCAGAGATGACTACTGCAGTGATGGCAACTTGTGACCATGGTGTTGTAGCGAAGATCAAAAGGGTTGTGATGGATCGAGATACTTACCCAAGAAAGTGGGGATTAGGTCCGAGGGCATCAATGAAGAAAAAACATTATTGGGGAAGGGAAGTTGGACAAGCATGGAAAACCAAATGAGAACACTCCTCAGGAATGGCTGAGGAATTTGGTTTTACCCACTGGTGGGGACTTTTTGGTTGCAAGTGCTTTCGCTACCGAATCCGCAACTGCTAAGCCTACTGCTGCAGAAGAGTCAGGAAAAGATGACGGAGGGCGGAAGCGAAAACTAGATGAAGATACTGAAGCTGCTCCAGCTAAGAAACTGAAGACTGAGGAAGTTGAAGAAGTCGGGAAGAAAGAAAAGAAGAAAAAGAAGAAAGACAAGGAGAAGGGTACAGCAGAAGAACCTTCTAATGAGGAGATTGTTGAGTATTCAGAGAAGAAGAAAAAGAAGAAGGACAAAGAAGCTAAAGAAGCAGGTACACCTGAGACACCGAAGTCCGAGAAGAAAAAGAAAAAGAAAGATAAGGAGTCTGGAAATGATGATTCTCAATTACCTGCTGCTGATGTTCAAAATGGTGAAGCACATGATCACGATGATGGAAGTGAGAAGAAAAAGAAGAAGAAAAAGAAGAAGAATAAAGAAGATGCTGAAGAATAAGATGATCACATTCTACTTTATATTTGGATGAAAGTTGATGCATGGTGAGCGTACTTGGTAACACCTCTAGGCTCTATTAAGACTGTAATGTTTGTTATGTGCAACAATACTCCATTAAAGAACTGATAAGTGGAAGCAGTTGATATCCAATTAACGATCTGTTGAGTATCCAAATATAAATCCAATGGCCTTGACTTCAACGAGGACATTACTCTTGGAAAGTTGGATTATCCTAAAGGTCTCCACTGTTAGGTTGGTGATCGATTCGATCACCAAAAACAAATGACTATAAAAATTGAAGCATTGTTTTCTATGTCTTTCCTAGTAGATTTGAAGACTGGATATCCATTTTTAGAAGTTTTTGAGAATGTGTTCGATACTTTTTTTCCAAAAGAATAAACATGAAATTCTTTGTATAGCCTTTCA

Coding sequence (CDS)

ATGTCGAAGCACAGCAGCAAGTCATCGGCTGTTAGTTCCGACGAACAGCCGCCAAAGGAAGTTGCTGACTTTATGATCAAGCCTCAAAGTTTTACTCCTCCGGTCGACACCTCTCAATGGCCTATTCTTCTGAAAAACTACGACCGTCTTAATGTACGTACTGGTCATTACACTCCATTGCCGTCTGGTTATTTGCCTCTCAAACGGCCTCTTGCTGAGTATATCAGGTATGGCATTCTCAATCTTGATAAACCAGCGAATCCTTCTTCGCATGAAGTTGTGGCTTGGATTAAGCGGATTCTTCGGGTTGATAAAACCGGTCATAGTGGTACTCTCGATCCGAAGGTTACTGGGAACCTGATTGTGTGCATTGATCGAGCCACGCGGCTAGTGAAATCGCAACAGGGTGCAGGTAAAGAGTACGTGTGTGTTGCTCGGTTGCATTCTGCTGTGCCCGATGTTTCTAAGGTTGCTCGGGCTCTGGAGACGCTCACTGGGGCTGTGTTTCAGAGGCCACCGTTGATATCTGCTGTGAAAAGACAGCTTAGGATTAGAACTATATATGAAAGCAAGCTTCTTGAGTATGATGCTGAGAAACATTTGGTTGTGTTTTGGATTTCTTGTGAAGCGGGAACTTACGTTAGGACGTTATGCGTACACTTGGGTTTGATTCTTGGCGTTGGAGGGCATATGCAGGAGCTTAGAAGGGTGAGATCTGGGATTTTGGGTGAGAAGGATAACATGGTTACAATGCATGATGTGATGGATGCTCAATGGGTTTATGATAATTTCAAGGATGAAAGCTATCTGAGGAGGGTAATTATGCCTCTTGAGGTTGTTTTGACGAGCTATAAAAGATTGGTTGTCAAGGATTCTGCTGTTAATGCTATTTGTTATGGTGCGAAGTTGATGATTCCAGGGCTGTTGAGATTTGAAAACGATATTGGTGTTGGGGAAGAAGTTGTACTTATGACTACCAAAGGTGAAGCTATTGCTCTTGGTATTGCAGAGATGACTACTGCAGTGATGGCAACTTGTGACCATGGTGTTGTAGCGAAGATCAAAAGGGTTGTGATGGATCGAGATACTTACCCAAGAAAGTGGGGATTAGGTCCGAGGGCATCAATGAAGAAAAAACATTATTGGGGAAGGGAAGTTGGACAAGCATGGAAAACCAAATGA

Protein sequence

MSKHSSKSSAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKHYWGREVGQAWKTK*
Homology
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BLAST of MELO3C002022 vs. Swiss-Prot
Match: CBF5_ARATH (H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana GN=CBF5 PE=1 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 5.5e-193
Identity = 329/374 (87.97%), Postives = 351/374 (93.85%), Query Frame = 1 

Query: 6   SKSSAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYL 65
           SK       E    +  D+MIKPQSFTP +DTSQWPILLKNYDRLNVRTGHYTP+ +G+ 
Sbjct: 9   SKKKKQDKTENDAADTGDYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHS 68

Query: 66  PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCID 125
           PLKRPL EYIRYG++NLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCID
Sbjct: 69  PLKRPLQEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 128

Query: 126 RATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIR 185
           RATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALE+LTGAVFQRPPLISAVKRQLRIR
Sbjct: 129 RATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQLRIR 188

Query: 186 TIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEK 245
           TIYESKLLEYDA++HLVVFW+SCEAGTY+RT+CVHLGL+LGVGGHMQELRRVRSGILGE 
Sbjct: 189 TIYESKLLEYDADRHLVVFWVSCEAGTYIRTMCVHLGLLLGVGGHMQELRRVRSGILGEN 248

Query: 246 DNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMI 305
           +NMVTMHDVMDAQ+VYDN +DESYLRRVIMPLE++LTSYKRLVVKDSAVNAICYGAKLMI
Sbjct: 249 NNMVTMHDVMDAQFVYDNSRDESYLRRVIMPLEMILTSYKRLVVKDSAVNAICYGAKLMI 308

Query: 306 PGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYP 365
           PGLLRFENDI VG EVVLMTTKGEAIA+GIAEMTT+VMATCDHGVVAKIKRVVMDRDTYP
Sbjct: 309 PGLLRFENDIDVGTEVVLMTTKGEAIAVGIAEMTTSVMATCDHGVVAKIKRVVMDRDTYP 368

Query: 366 RKWGLGPRASMKKK 380
           RKWGLGPRASMKKK
Sbjct: 369 RKWGLGPRASMKKK 382

[Close]
BLAST of MELO3C002022 vs. Swiss-Prot
Match: DKC1_MOUSE (H/ACA ribonucleoprotein complex subunit 4 OS=Mus musculus GN=Dkc1 PE=1 SV=4)

HSP 1 Score: 572.4 bits (1474), Expect = 3.8e-162
Identity = 272/379 (71.77%), Postives = 326/379 (86.02%), Query Frame = 1 

Query: 3   KHSSKSSAVSSDEQPPKEVA---DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTP 62
           KH  K       E    E+    +F+IKP+S    +DTSQWP+LLKN+D+LNVRT HYTP
Sbjct: 12  KHKKKKDRKPLQEDDVAEIQHAEEFLIKPESKVAQLDTSQWPLLLKNFDKLNVRTAHYTP 71

Query: 63  LPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGN 122
           LP G  PLKR + +YIR G +NLDKP+NPSSHEVVAWI+RILRV+KTGHSGTLDPKVTG 
Sbjct: 72  LPCGSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGC 131

Query: 123 LIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVK 182
           LIVCI+RATRLVKSQQ AGKEYV + RLH+A+   ++++RALETLTGA+FQRPPLI+AVK
Sbjct: 132 LIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALETLTGALFQRPPLIAAVK 191

Query: 183 RQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRS 242
           RQLR+RTIYESK++EYD E+ L +FW+SCEAGTY+RTLCVHLGL+LGVGG MQELRRVRS
Sbjct: 192 RQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRS 251

Query: 243 GILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICY 302
           G++ EKD+MVTMHDV+DAQW+YDN KDESYLRRV+ PLE +LTS+KRLV+KDSAVNAICY
Sbjct: 252 GVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICY 311

Query: 303 GAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVM 362
           GAK+M+PGLLR+E+ I V +E+V++TTKGEAI + IA MTTAV++TCDHG+VAKIKRV+M
Sbjct: 312 GAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIM 371

Query: 363 DRDTYPRKWGLGPRASMKK 379
           +RDTYPRKWGLGP+AS KK
Sbjct: 372 ERDTYPRKWGLGPKASQKK 390

[Close]
BLAST of MELO3C002022 vs. Swiss-Prot
Match: DKC1_CHICK (H/ACA ribonucleoprotein complex subunit 4 OS=Gallus gallus GN=DKC1 PE=2 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 6.5e-162
Identity = 273/376 (72.61%), Postives = 326/376 (86.70%), Query Frame = 1 

Query: 3   KHSSKSSAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPS 62
           +   K S    D    +   +F+IKP+S    +DTSQWP+LLKN+D+LNV T HYTPLPS
Sbjct: 13  RKKDKRSLPDEDVADIQHTEEFLIKPESRVAQLDTSQWPLLLKNFDKLNVLTTHYTPLPS 72

Query: 63  GYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIV 122
           G  PLKR +++Y+R G +NLDKP+NPSSHEVVAWI+RILRV+KTGHSGTLDPKVTG LIV
Sbjct: 73  GANPLKREISDYVRSGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 132

Query: 123 CIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQL 182
           CI+RATRLVKSQQ AGKEYV + RLH+A+   +++ARA+ETLTGA+FQRPPLI+AVKRQL
Sbjct: 133 CIERATRLVKSQQSAGKEYVGIVRLHNAIESEAQLARAIETLTGALFQRPPLIAAVKRQL 192

Query: 183 RIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGIL 242
           R+RTIYESKL+EYD E+ L +FW+SCEAGTY+RTLCVHLGL+LGVGG MQELRRVRSGIL
Sbjct: 193 RVRTIYESKLVEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGIL 252

Query: 243 GEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAK 302
           GE DNMVTMHDV+DAQW YDN KD+SYLRRVI+PLE +LTS+KRLV+KDSAVNAICYGAK
Sbjct: 253 GEMDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMKDSAVNAICYGAK 312

Query: 303 LMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRD 362
           +M+PG+LR+E+ I + +E+V++TTKGEAI L IA MTTAV++TCDHGVVAKIKRV+M+RD
Sbjct: 313 IMLPGVLRYEDGIELKQEIVVITTKGEAICLAIALMTTAVISTCDHGVVAKIKRVIMERD 372

Query: 363 TYPRKWGLGPRASMKK 379
           TYPRKWGLGP+AS KK
Sbjct: 373 TYPRKWGLGPKASQKK 388

[Close]
BLAST of MELO3C002022 vs. Swiss-Prot
Match: DKC1_HUMAN (H/ACA ribonucleoprotein complex subunit 4 OS=Homo sapiens GN=DKC1 PE=1 SV=3)

HSP 1 Score: 569.7 bits (1467), Expect = 2.5e-161
Identity = 271/379 (71.50%), Postives = 327/379 (86.28%), Query Frame = 1 

Query: 3   KHSSKSSAVSSDEQPPKEVA---DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTP 62
           KH  K    S  E+   E+    +F+IKP+S    +DTSQWP+LLKN+D+LNVRT HYTP
Sbjct: 12  KHKKKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTP 71

Query: 63  LPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGN 122
           L  G  PLKR + +YIR G +NLDKP+NPSSHEVVAWI+RILRV+KTGHSGTLDPKVTG 
Sbjct: 72  LACGSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGC 131

Query: 123 LIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVK 182
           LIVCI+RATRLVKSQQ AGKEYV + RLH+A+   ++++RALETLTGA+FQRPPLI+AVK
Sbjct: 132 LIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALETLTGALFQRPPLIAAVK 191

Query: 183 RQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRS 242
           RQLR+RTIYESK++EYD E+ L +FW+SCEAGTY+RTLCVHLGL+LGVGG MQELRRVRS
Sbjct: 192 RQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRS 251

Query: 243 GILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICY 302
           G++ EKD+MVTMHDV+DAQW+YDN KDESYLRRV+ PLE +LTS+KRLV+KDSAVNAICY
Sbjct: 252 GVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICY 311

Query: 303 GAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVM 362
           GAK+M+PG+LR+E+ I V +E+V++TTKGEAI + IA MTTAV++TCDHG+VAKIKRV+M
Sbjct: 312 GAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIM 371

Query: 363 DRDTYPRKWGLGPRASMKK 379
           +RDTYPRKWGLGP+AS KK
Sbjct: 372 ERDTYPRKWGLGPKASQKK 390

[Close]
BLAST of MELO3C002022 vs. Swiss-Prot
Match: DKC1_RAT (H/ACA ribonucleoprotein complex subunit 4 OS=Rattus norvegicus GN=Dkc1 PE=1 SV=4)

HSP 1 Score: 568.5 bits (1464), Expect = 5.5e-161
Identity = 272/380 (71.58%), Postives = 328/380 (86.32%), Query Frame = 1 

Query: 3   KHSSKSSAVSSDEQPPKEVA---DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTP 62
           KH  K       E    E+    DF+IKP+S    +DTSQWP+LLKN+DRLNVRT HYTP
Sbjct: 13  KHKKKKERKPLPEADVAEIQHAEDFLIKPESKAAQLDTSQWPLLLKNFDRLNVRTTHYTP 72

Query: 63  LPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGN 122
           +P G  PLKR + EY+R G +NLDKP+NPSSHEVVAWI+RILRV+KTGHSGTLDPKVTG 
Sbjct: 73  IPCGSNPLKREIGEYVRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGC 132

Query: 123 LIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVK 182
           LIVCI+RATRLVKSQQ AGKEYV V RLH+A+   ++++RALETLTGA+FQRPPLI+AVK
Sbjct: 133 LIVCIERATRLVKSQQSAGKEYVGVVRLHNAIEGTAQLSRALETLTGALFQRPPLIAAVK 192

Query: 183 RQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRS 242
           RQLR+RTIYES+++EYD E+ L VFW+SCEAGTY+RTLCVHLGL+LGVGG MQELRRVRS
Sbjct: 193 RQLRVRTIYESRVVEYDPERRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRS 252

Query: 243 GILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICY 302
           G++GE+D+MVTMHDV+DAQ++YD+ +DESYLRRV+ PLE +LTS+KRLV+KDSAVNAICY
Sbjct: 253 GVVGERDHMVTMHDVLDAQYLYDHHRDESYLRRVVFPLEKLLTSHKRLVMKDSAVNAICY 312

Query: 303 GAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVM 362
           GAK+M+PGLLR+E+ I V +EVV++TTKGEA+ + IA MTTAV++TCDHGVVAKIKRV+M
Sbjct: 313 GAKIMLPGLLRYEDGIEVNQEVVVITTKGEAVCVAIALMTTAVISTCDHGVVAKIKRVIM 372

Query: 363 DRDTYPRKWGLGPRASMKKK 380
           +RDTYPRKWGLGP+AS KK+
Sbjct: 373 ERDTYPRKWGLGPKASQKKQ 392

[Close]
BLAST of MELO3C002022 vs. TrEMBL
Match: A0A0K9RCP8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_086290 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 9.7e-197
Identity = 343/388 (88.40%), Postives = 363/388 (93.56%), Query Frame = 1 

Query: 2   SKHSSKSSAVSSDEQPPKEV----------ADFMIKPQSFTPPVDTSQWPILLKNYDRLN 61
           S    KS + ++D+  PK             DF+IKPQSFTP +DTS+WPILLKNYDRLN
Sbjct: 9   SDKKKKSKSAAADDGVPKTTDSHAQDDTNNTDFLIKPQSFTPTIDTSEWPILLKNYDRLN 68

Query: 62  VRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGT 121
           VRTGHYTPLPSG+ PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRV+KTGHSGT
Sbjct: 69  VRTGHYTPLPSGFSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGT 128

Query: 122 LDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQR 181
           LDPKVTGNLIVCI+RATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALETLTGAVFQR
Sbjct: 129 LDPKVTGNLIVCIERATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALETLTGAVFQR 188

Query: 182 PPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHM 241
           PPLISAVKRQLRIRTIYESKLLEYDA++HLVVFWISCEAGTYVRTLCVHLGL+LGVGGHM
Sbjct: 189 PPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHM 248

Query: 242 QELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKD 301
           QELRRVRSGILGEK NMVTMHDVMDAQW+YDN++DESYLRRVIMPLEVVLTSYKRLVVKD
Sbjct: 249 QELRRVRSGILGEKSNMVTMHDVMDAQWMYDNYRDESYLRRVIMPLEVVLTSYKRLVVKD 308

Query: 302 SAVNAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVV 361
           SAVNAICYGAKLMIPGLLRFENDI VGEE+VLMTTKGEAIALGIAEMTTAVMATCDHG+V
Sbjct: 309 SAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAIALGIAEMTTAVMATCDHGIV 368

Query: 362 AKIKRVVMDRDTYPRKWGLGPRASMKKK 380
           AKIKRV+MDRDTYPRKWGLGPRASMKKK
Sbjct: 369 AKIKRVIMDRDTYPRKWGLGPRASMKKK 396

[Close]
BLAST of MELO3C002022 vs. TrEMBL
Match: A0A0K9R974_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099290 PE=4 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 1.7e-196
Identity = 344/385 (89.35%), Postives = 364/385 (94.55%), Query Frame = 1 

Query: 3   KHSSKSSAV------SSDEQPPKEV--ADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRT 62
           K  SKS+A       ++D  P  +    DF+IKPQSFTP +DTS+WPILLKNYDRLNVRT
Sbjct: 13  KKKSKSTAEKNDTPKTTDSHPENDTNNTDFLIKPQSFTPTIDTSEWPILLKNYDRLNVRT 72

Query: 63  GHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDP 122
           GHYTPLPSG+ PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDP
Sbjct: 73  GHYTPLPSGFSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDP 132

Query: 123 KVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPL 182
           KVTGNLIVCI+RATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALETLTGAVFQRPPL
Sbjct: 133 KVTGNLIVCIERATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALETLTGAVFQRPPL 192

Query: 183 ISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQEL 242
           ISAVKRQLRIRTIYESKLLEYDA++HLVVFWISCEAGTYVRTLCVHLGL+LGVGGHMQEL
Sbjct: 193 ISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHMQEL 252

Query: 243 RRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAV 302
           RRVRSGILGEK NMVTMHDVMDAQW+YDN++DESYLRRVIMPLEVVLTSYKRLVVKDSAV
Sbjct: 253 RRVRSGILGEKSNMVTMHDVMDAQWMYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAV 312

Query: 303 NAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKI 362
           NAICYGAKLMIPGLLRFENDI VGEE+VLMTTKGEAIALGIAEMTTAVMATCDHG+VAKI
Sbjct: 313 NAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAIALGIAEMTTAVMATCDHGIVAKI 372

Query: 363 KRVVMDRDTYPRKWGLGPRASMKKK 380
           KRV+MDRDTYPRKWGLGPRASMKKK
Sbjct: 373 KRVIMDRDTYPRKWGLGPRASMKKK 397

[Close]
BLAST of MELO3C002022 vs. TrEMBL
Match: A0A0E0H7P8_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 3.2e-184
Identity = 316/378 (83.60%), Postives = 345/378 (91.27%), Query Frame = 1 

Query: 2   SKHSSKSSAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLP 61
           S  S   +A S DE    +   ++IKPQS  PP+DTS WP+LLKNYDRLNVRTGHYTPLP
Sbjct: 32  SSSSLAVAAASVDEAAEAKADGYLIKPQSVAPPLDTSAWPLLLKNYDRLNVRTGHYTPLP 91

Query: 62  SGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLI 121
           +G+ PLKRP+AEY+RYG++NLDKP+NPSSHEVVAWIKR+LRVDKTGHSGTLDPKVTGNLI
Sbjct: 92  AGHSPLKRPIAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVDKTGHSGTLDPKVTGNLI 151

Query: 122 VCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQ 181
           VC+DRATRLVKSQQGAGKEYVCVAR H+AVPD ++VARALE LTGAVFQRPPLISAVKRQ
Sbjct: 152 VCVDRATRLVKSQQGAGKEYVCVARFHAAVPDTARVARALEALTGAVFQRPPLISAVKRQ 211

Query: 182 LRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGI 241
           LR+ TIYESKLLE+DA++HL VFWISCEAGTYVRTLCVHLGL+LGVG HMQELRRVRSGI
Sbjct: 212 LRVSTIYESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGI 271

Query: 242 LGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGA 301
           LGE DNMVTMHDVMDA+W  DNF DESYLRR++MPLEV+LTSYKRLVVKDSAVNAICYGA
Sbjct: 272 LGETDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGA 331

Query: 302 KLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDR 361
           KLMIPGLLRFEN+I VGEEVVLMTTKGEAIA+GIAEMTTAVMATCDHG VAKIKRVVMDR
Sbjct: 332 KLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDR 391

Query: 362 DTYPRKWGLGPRASMKKK 380
           DTYPRKWGLGP A  KKK
Sbjct: 392 DTYPRKWGLGPVALKKKK 409

[Close]
BLAST of MELO3C002022 vs. TrEMBL
Match: A0A0E0NVL0_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 3.2e-184
Identity = 314/371 (84.64%), Postives = 344/371 (92.72%), Query Frame = 1 

Query: 9   SAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLK 68
           +A S DE    +   ++IKPQS  PP+DTS WP+LLKNYDRLNVRTGHYTPLP+G+ PLK
Sbjct: 39  AAASVDEAAEAKADGYLIKPQSVAPPLDTSAWPLLLKNYDRLNVRTGHYTPLPAGHSPLK 98

Query: 69  RPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRAT 128
           RP+AEY+RYG++NLDKP+NPSSHEVVAWIKR+LRV+KTGHSGTLDPKVTGNLIVC+DRAT
Sbjct: 99  RPIAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRAT 158

Query: 129 RLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIY 188
           RLVKSQQGAGKEYVCVAR H+AVPD ++VARALE LTGAVFQRPPLISAVKRQLR+RTIY
Sbjct: 159 RLVKSQQGAGKEYVCVARFHAAVPDTARVARALEALTGAVFQRPPLISAVKRQLRVRTIY 218

Query: 189 ESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNM 248
           ESKLLE+DA++HL VFWISCEAGTYVRTLCVHLGL+LGVG HMQELRRVRSGILGE DNM
Sbjct: 219 ESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGETDNM 278

Query: 249 VTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGL 308
           VTMHDVMDA+W  DNF DESYLRR++MPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGL
Sbjct: 279 VTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGL 338

Query: 309 LRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKW 368
           LRFEN+I VGEEVVLMTTKGEAIA+GIAEMTTAVMATCDHG VAKIKRVVMDRDTYPRKW
Sbjct: 339 LRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKW 398

Query: 369 GLGPRASMKKK 380
           GLGP A  KKK
Sbjct: 399 GLGPVALKKKK 409

[Close]
BLAST of MELO3C002022 vs. TrEMBL
Match: Q10KT9_ORYSJ (H/ACA ribonucleoprotein complex subunit 4, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g25450 PE=2 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 3.2e-184
Identity = 314/371 (84.64%), Postives = 344/371 (92.72%), Query Frame = 1 

Query: 9   SAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLK 68
           +A S DE    +   ++IKPQS  PP+DTS WP+LLKNYDRLNVRTGHYTPLP+G+ PLK
Sbjct: 39  AAASVDEAAEAKADGYLIKPQSVAPPLDTSAWPLLLKNYDRLNVRTGHYTPLPAGHSPLK 98

Query: 69  RPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRAT 128
           RP+AEY+RYG++NLDKP+NPSSHEVVAWIKR+LRV+KTGHSGTLDPKVTGNLIVC+DRAT
Sbjct: 99  RPIAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRAT 158

Query: 129 RLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIY 188
           RLVKSQQGAGKEYVCVAR H+AVPD ++VARALE LTGAVFQRPPLISAVKRQLR+RTIY
Sbjct: 159 RLVKSQQGAGKEYVCVARFHAAVPDTARVARALEALTGAVFQRPPLISAVKRQLRVRTIY 218

Query: 189 ESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNM 248
           ESKLLE+DA++HL VFWISCEAGTYVRTLCVHLGL+LGVG HMQELRRVRSGILGE DNM
Sbjct: 219 ESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGETDNM 278

Query: 249 VTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGL 308
           VTMHDVMDA+W  DNF DESYLRR++MPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGL
Sbjct: 279 VTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGL 338

Query: 309 LRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKW 368
           LRFEN+I VGEEVVLMTTKGEAIA+GIAEMTTAVMATCDHG VAKIKRVVMDRDTYPRKW
Sbjct: 339 LRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKW 398

Query: 369 GLGPRASMKKK 380
           GLGP A  KKK
Sbjct: 399 GLGPVALKKKK 409

[Close]
BLAST of MELO3C002022 vs. TAIR10
Match: AT3G57150.1 (AT3G57150.1 homologue of NAP57)

HSP 1 Score: 674.9 bits (1740), Expect = 3.1e-194
Identity = 329/374 (87.97%), Postives = 351/374 (93.85%), Query Frame = 1 

Query: 6   SKSSAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYL 65
           SK       E    +  D+MIKPQSFTP +DTSQWPILLKNYDRLNVRTGHYTP+ +G+ 
Sbjct: 9   SKKKKQDKTENDAADTGDYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHS 68

Query: 66  PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCID 125
           PLKRPL EYIRYG++NLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCID
Sbjct: 69  PLKRPLQEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 128

Query: 126 RATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIR 185
           RATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALE+LTGAVFQRPPLISAVKRQLRIR
Sbjct: 129 RATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQLRIR 188

Query: 186 TIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEK 245
           TIYESKLLEYDA++HLVVFW+SCEAGTY+RT+CVHLGL+LGVGGHMQELRRVRSGILGE 
Sbjct: 189 TIYESKLLEYDADRHLVVFWVSCEAGTYIRTMCVHLGLLLGVGGHMQELRRVRSGILGEN 248

Query: 246 DNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMI 305
           +NMVTMHDVMDAQ+VYDN +DESYLRRVIMPLE++LTSYKRLVVKDSAVNAICYGAKLMI
Sbjct: 249 NNMVTMHDVMDAQFVYDNSRDESYLRRVIMPLEMILTSYKRLVVKDSAVNAICYGAKLMI 308

Query: 306 PGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYP 365
           PGLLRFENDI VG EVVLMTTKGEAIA+GIAEMTT+VMATCDHGVVAKIKRVVMDRDTYP
Sbjct: 309 PGLLRFENDIDVGTEVVLMTTKGEAIAVGIAEMTTSVMATCDHGVVAKIKRVVMDRDTYP 368

Query: 366 RKWGLGPRASMKKK 380
           RKWGLGPRASMKKK
Sbjct: 369 RKWGLGPRASMKKK 382

[Close]
BLAST of MELO3C002022 vs. TAIR10
Match: AT5G14460.1 (AT5G14460.1 Pseudouridine synthase family protein)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-20
Identity = 64/202 (31.68%), Postives = 96/202 (47.52%), Query Frame = 1 

Query: 79  ILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAG 138
           +L ++KP   +S  V   ++R+++V K GH+GTLDP  TG LIVC+ +AT++V   QG  
Sbjct: 323 VLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMI 382

Query: 139 KEYVCVARLHSAVPDV-----------------SKVARALETLTGAVFQRPPLISAVK-- 198
           K Y  V RL  A   +                   + +AL +  G ++Q PP+ SA+K  
Sbjct: 383 KGYSGVFRLGEATSTLDADSPVIQRESWEHIKDDDIKKALTSFLGEIWQVPPMFSAIKVG 442

Query: 199 ------RQLRIRTIYES----KLLEYDAEKHL-----VVFWISCEAGTYVRTLCVHLGLI 247
                 +  R  T+  S     + ++D E+ L     ++F + C  GTY+R+LC  L   
Sbjct: 443 GEKMYEKARRGETVELSPRRISIFQFDIERSLDDRQNLIFRVICSKGTYIRSLCADLAKA 502

[Close]
BLAST of MELO3C002022 vs. NCBI nr
Match: gi|902211585|gb|KNA16764.1| (hypothetical protein SOVF_086290 [Spinacia oleracea])

HSP 1 Score: 694.1 bits (1790), Expect = 1.4e-196
Identity = 343/388 (88.40%), Postives = 363/388 (93.56%), Query Frame = 1 

Query: 2   SKHSSKSSAVSSDEQPPKEV----------ADFMIKPQSFTPPVDTSQWPILLKNYDRLN 61
           S    KS + ++D+  PK             DF+IKPQSFTP +DTS+WPILLKNYDRLN
Sbjct: 9   SDKKKKSKSAAADDGVPKTTDSHAQDDTNNTDFLIKPQSFTPTIDTSEWPILLKNYDRLN 68

Query: 62  VRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGT 121
           VRTGHYTPLPSG+ PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRV+KTGHSGT
Sbjct: 69  VRTGHYTPLPSGFSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGT 128

Query: 122 LDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQR 181
           LDPKVTGNLIVCI+RATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALETLTGAVFQR
Sbjct: 129 LDPKVTGNLIVCIERATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALETLTGAVFQR 188

Query: 182 PPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHM 241
           PPLISAVKRQLRIRTIYESKLLEYDA++HLVVFWISCEAGTYVRTLCVHLGL+LGVGGHM
Sbjct: 189 PPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHM 248

Query: 242 QELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKD 301
           QELRRVRSGILGEK NMVTMHDVMDAQW+YDN++DESYLRRVIMPLEVVLTSYKRLVVKD
Sbjct: 249 QELRRVRSGILGEKSNMVTMHDVMDAQWMYDNYRDESYLRRVIMPLEVVLTSYKRLVVKD 308

Query: 302 SAVNAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVV 361
           SAVNAICYGAKLMIPGLLRFENDI VGEE+VLMTTKGEAIALGIAEMTTAVMATCDHG+V
Sbjct: 309 SAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAIALGIAEMTTAVMATCDHGIV 368

Query: 362 AKIKRVVMDRDTYPRKWGLGPRASMKKK 380
           AKIKRV+MDRDTYPRKWGLGPRASMKKK
Sbjct: 369 AKIKRVIMDRDTYPRKWGLGPRASMKKK 396

[Close]
BLAST of MELO3C002022 vs. NCBI nr
Match: gi|902205913|gb|KNA15312.1| (hypothetical protein SOVF_099290 [Spinacia oleracea])

HSP 1 Score: 693.3 bits (1788), Expect = 2.4e-196
Identity = 344/385 (89.35%), Postives = 364/385 (94.55%), Query Frame = 1 

Query: 3   KHSSKSSAV------SSDEQPPKEV--ADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRT 62
           K  SKS+A       ++D  P  +    DF+IKPQSFTP +DTS+WPILLKNYDRLNVRT
Sbjct: 13  KKKSKSTAEKNDTPKTTDSHPENDTNNTDFLIKPQSFTPTIDTSEWPILLKNYDRLNVRT 72

Query: 63  GHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDP 122
           GHYTPLPSG+ PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDP
Sbjct: 73  GHYTPLPSGFSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDP 132

Query: 123 KVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPL 182
           KVTGNLIVCI+RATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALETLTGAVFQRPPL
Sbjct: 133 KVTGNLIVCIERATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALETLTGAVFQRPPL 192

Query: 183 ISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQEL 242
           ISAVKRQLRIRTIYESKLLEYDA++HLVVFWISCEAGTYVRTLCVHLGL+LGVGGHMQEL
Sbjct: 193 ISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHMQEL 252

Query: 243 RRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAV 302
           RRVRSGILGEK NMVTMHDVMDAQW+YDN++DESYLRRVIMPLEVVLTSYKRLVVKDSAV
Sbjct: 253 RRVRSGILGEKSNMVTMHDVMDAQWMYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAV 312

Query: 303 NAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKI 362
           NAICYGAKLMIPGLLRFENDI VGEE+VLMTTKGEAIALGIAEMTTAVMATCDHG+VAKI
Sbjct: 313 NAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAIALGIAEMTTAVMATCDHGIVAKI 372

Query: 363 KRVVMDRDTYPRKWGLGPRASMKKK 380
           KRV+MDRDTYPRKWGLGPRASMKKK
Sbjct: 373 KRVIMDRDTYPRKWGLGPRASMKKK 397

[Close]
BLAST of MELO3C002022 vs. NCBI nr
Match: gi|1002252952|ref|XP_015630709.1| (PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Oryza sativa Japonica Group])

HSP 1 Score: 652.5 bits (1682), Expect = 4.6e-184
Identity = 314/371 (84.64%), Postives = 344/371 (92.72%), Query Frame = 1 

Query: 9   SAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLK 68
           +A S DE    +   ++IKPQS  PP+DTS WP+LLKNYDRLNVRTGHYTPLP+G+ PLK
Sbjct: 39  AAASVDEAAEAKADGYLIKPQSVAPPLDTSAWPLLLKNYDRLNVRTGHYTPLPAGHSPLK 98

Query: 69  RPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRAT 128
           RP+AEY+RYG++NLDKP+NPSSHEVVAWIKR+LRV+KTGHSGTLDPKVTGNLIVC+DRAT
Sbjct: 99  RPIAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRAT 158

Query: 129 RLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIY 188
           RLVKSQQGAGKEYVCVAR H+AVPD ++VARALE LTGAVFQRPPLISAVKRQLR+RTIY
Sbjct: 159 RLVKSQQGAGKEYVCVARFHAAVPDTARVARALEALTGAVFQRPPLISAVKRQLRVRTIY 218

Query: 189 ESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNM 248
           ESKLLE+DA++HL VFWISCEAGTYVRTLCVHLGL+LGVG HMQELRRVRSGILGE DNM
Sbjct: 219 ESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGETDNM 278

Query: 249 VTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGL 308
           VTMHDVMDA+W  DNF DESYLRR++MPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGL
Sbjct: 279 VTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGL 338

Query: 309 LRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKW 368
           LRFEN+I VGEEVVLMTTKGEAIA+GIAEMTTAVMATCDHG VAKIKRVVMDRDTYPRKW
Sbjct: 339 LRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKW 398

Query: 369 GLGPRASMKKK 380
           GLGP A  KKK
Sbjct: 399 GLGPVALKKKK 409

[Close]
BLAST of MELO3C002022 vs. NCBI nr
Match: gi|573925148|ref|XP_006650126.1| (PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Oryza brachyantha])

HSP 1 Score: 648.7 bits (1672), Expect = 6.7e-183
Identity = 315/397 (79.35%), Postives = 348/397 (87.66%), Query Frame = 1 

Query: 1   MSKHSSKSSAVSSDEQPPKEVA------------------DFMIKPQSFTPPVDTSQWPI 60
           + K  SK  +    ++PP  +A                   ++IKPQS  PP+DTS WP+
Sbjct: 15  VGKTKSKKKSKKHQDEPPSSLAVAAPSPAEAEAEAAAKSDGYLIKPQSLVPPLDTSAWPL 74

Query: 61  LLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILR 120
           LLKNYDRLNVRTGHYTPLP+G+ PLKRP+AEY+RYG++NLDKP+NPSSHEVVAWIKR+LR
Sbjct: 75  LLKNYDRLNVRTGHYTPLPAGHSPLKRPIAEYLRYGVINLDKPSNPSSHEVVAWIKRLLR 134

Query: 121 VDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALE 180
           V+KTGHSGTLDPKVTGNLIVC++RA RLVKSQQGAGKEYVCVAR H+AVPD ++VARALE
Sbjct: 135 VEKTGHSGTLDPKVTGNLIVCVERAPRLVKSQQGAGKEYVCVARFHAAVPDTARVARALE 194

Query: 181 TLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLG 240
            LTGAVFQRPPLISAVKRQLR+RTIYESKLLE+DAE+HL VFWISCEAGTYVRTLCVHLG
Sbjct: 195 ALTGAVFQRPPLISAVKRQLRVRTIYESKLLEHDAERHLAVFWISCEAGTYVRTLCVHLG 254

Query: 241 LILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLT 300
           L+LGVG HMQELRRVRSGILGE DNMVTMHDVMDA+W  DNF DESYLRR++MPLEV+LT
Sbjct: 255 LLLGVGAHMQELRRVRSGILGESDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLT 314

Query: 301 SYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAV 360
           SYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+ VGEEVVLMTTKGEAIA+GIAEMTTAV
Sbjct: 315 SYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMTTKGEAIAIGIAEMTTAV 374

Query: 361 MATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK 380
           MATCDHG VAKIKRVVMDRDTYPRKWGLGP A  KKK
Sbjct: 375 MATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKK 411

[Close]
BLAST of MELO3C002022 vs. NCBI nr
Match: gi|971518220|dbj|GAQ79971.1| (Pseudouridine synthase family protein [Klebsormidium flaccidum])

HSP 1 Score: 639.8 bits (1649), Expect = 3.1e-180
Identity = 310/392 (79.08%), Postives = 350/392 (89.29%), Query Frame = 1 

Query: 3   KHSSKSSAVSSDEQPPKEV---------------ADFMIKPQSFTPPVDTSQWPILLKNY 62
           K   KS A S  E+   E                 DF+IKP++ T  +DTS+WPILLKNY
Sbjct: 9   KKKKKSKAKSEPEEAAPEANGVLADAAAGNAQLSTDFLIKPENITAKLDTSKWPILLKNY 68

Query: 63  DRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTG 122
           D+LNVRTGHYTP+P+G+ PLKRPL +Y+RYG++NLDKPANPSSHEVVAWI+RILRVDKTG
Sbjct: 69  DKLNVRTGHYTPIPTGFSPLKRPLYDYVRYGVINLDKPANPSSHEVVAWIRRILRVDKTG 128

Query: 123 HSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGA 182
           HSGTLDPKVTG+L+VCIDRATRLVK+QQGAGKEYVCVARLHSAV DV+KVARA+ETLTGA
Sbjct: 129 HSGTLDPKVTGSLVVCIDRATRLVKAQQGAGKEYVCVARLHSAVDDVAKVARAIETLTGA 188

Query: 183 VFQRPPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGV 242
           +FQRPPLISAVKRQLRIRTIY+SKLLEYDAE+ LVVFW+SCEAGTY+RTLCVHLGL+LGV
Sbjct: 189 LFQRPPLISAVKRQLRIRTIYKSKLLEYDAERQLVVFWVSCEAGTYIRTLCVHLGLLLGV 248

Query: 243 GGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRL 302
           GGHMQELRRVRSGILGE+DN+VTMHDV+DAQW YDN+KDE+YLRRVI PLE++LTSYKR+
Sbjct: 249 GGHMQELRRVRSGILGEQDNLVTMHDVLDAQWQYDNYKDEAYLRRVISPLEILLTSYKRI 308

Query: 303 VVKDSAVNAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCD 362
           VVKDSAVNAICYGAKLMIPGLLR+E+ I V EEVVLMTTKGEAIALG+A+MTTAVMATCD
Sbjct: 309 VVKDSAVNAICYGAKLMIPGLLRYESGIEVNEEVVLMTTKGEAIALGVAQMTTAVMATCD 368

Query: 363 HGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK 380
           HGVVAK+KRVVM+RDTYPRKWGLGP A  KKK
Sbjct: 369 HGVVAKVKRVVMERDTYPRKWGLGPTAQSKKK 400

The following BLAST results are available for this feature:
BLAST of MELO3C002022 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CBF5_ARATH5.5e-19387.97H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana GN=CBF5 PE=1 S... [more]
DKC1_MOUSE3.8e-16271.77H/ACA ribonucleoprotein complex subunit 4 OS=Mus musculus GN=Dkc1 PE=1 SV=4[more]
DKC1_CHICK6.5e-16272.61H/ACA ribonucleoprotein complex subunit 4 OS=Gallus gallus GN=DKC1 PE=2 SV=1[more]
DKC1_HUMAN2.5e-16171.50H/ACA ribonucleoprotein complex subunit 4 OS=Homo sapiens GN=DKC1 PE=1 SV=3[more]
DKC1_RAT5.5e-16171.58H/ACA ribonucleoprotein complex subunit 4 OS=Rattus norvegicus GN=Dkc1 PE=1 SV=4[more]
BLAST of MELO3C002022 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0K9RCP8_SPIOL9.7e-19788.40Uncharacterized protein OS=Spinacia oleracea GN=SOVF_086290 PE=4 SV=1[more]
A0A0K9R974_SPIOL1.7e-19689.35Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099290 PE=4 SV=1[more]
A0A0E0H7P8_ORYNI3.2e-18483.60Uncharacterized protein OS=Oryza nivara PE=4 SV=1[more]
A0A0E0NVL0_ORYRU3.2e-18484.64Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1[more]
Q10KT9_ORYSJ3.2e-18484.64H/ACA ribonucleoprotein complex subunit 4, putative, expressed OS=Oryza sativa s... [more]
BLAST of MELO3C002022 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57150.13.1e-19487.97 homologue of NAP57[more]
AT5G14460.15.9e-2031.68 Pseudouridine synthase family protein[more]
BLAST of MELO3C002022 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|902211585|gb|KNA16764.1|1.4e-19688.40hypothetical protein SOVF_086290 [Spinacia oleracea][more]
gi|902205913|gb|KNA15312.1|2.4e-19689.35hypothetical protein SOVF_099290 [Spinacia oleracea][more]
gi|1002252952|ref|XP_015630709.1|4.6e-18484.64PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Oryza sativa Japonica Grou... [more]
gi|573925148|ref|XP_006650126.1|6.7e-18379.35PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Oryza brachyantha][more]
gi|971518220|dbj|GAQ79971.1|3.1e-18079.08Pseudouridine synthase family protein [Klebsormidium flaccidum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR002501PsdUridine_synth_N
IPR004521Uncharacterised_CHP00451
IPR004802tRNA_PsdUridine_synth_B_fam
IPR012960Dyskerin-like
IPR015947PUA-like_sf
IPR020103PsdUridine_synth_cat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0009451 RNA modification
biological_process GO:0000495 box H/ACA snoRNA 3'-end processing
biological_process GO:1990481 mRNA pseudouridine synthesis
biological_process GO:0031118 rRNA pseudouridine synthesis
biological_process GO:0031120 snRNA pseudouridine synthesis
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU58427melon EST collection version 4.0transcribed_cluster
MU58440melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002022T1MELO3C002022T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU58440MU58440transcribed_cluster
MU58427MU58427transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002478PUA domainPFAMPF01472PUAcoord: 285..357
score: 6.6
IPR002478PUA domainSMARTSM00359pua_5coord: 285..359
score: 1.0
IPR002478PUA domainPROFILEPS50890PUAcoord: 284..359
score: 18
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 98..214
score: 1.2
IPR004521Uncharacterised domain CHP00451TIGRFAMsTIGR00451TIGR00451coord: 281..356
score: 2.
IPR004802tRNA pseudouridine synthase B familyPANTHERPTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5coord: 23..379
score:
IPR004802tRNA pseudouridine synthase B familyTIGRFAMsTIGR00425TIGR00425coord: 44..369
score: 5.0E
IPR012960Dyskerin-likePFAMPF08068DKCLDcoord: 37..94
score: 7.8
IPR012960Dyskerin-likeSMARTSM01136DKCLD_2coord: 36..94
score: 1.4
IPR015947PUA-like domainGENE3DG3DSA:2.30.130.10coord: 283..366
score: 7.3
IPR015947PUA-like domainunknownSSF88697PUA domain-likecoord: 284..365
score: 2.76
IPR020103Pseudouridine synthase, catalytic domainunknownSSF55120Pseudouridine synthasecoord: 37..282
score: 1.87
NoneNo IPR availablePANTHERPTHR23127:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 4coord: 23..379
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C002022Csa1G039120Cucumber (Chinese Long) v2cumeB027
MELO3C002022Cla018571Watermelon (97103) v1mewmB174
MELO3C002022ClCG04G011850Watermelon (Charleston Gray)mewcgB154
MELO3C002022Cla97C04G078760Watermelon (97103) v2mewmbB159
MELO3C002022Bhi08G000925Wax gourdmewgoB163
MELO3C002022CSPI01G06060Wild cucumber (PI 183967)cpimeB024
MELO3C002022Cucsa.113160Cucumber (Gy14) v1cgymeB156
MELO3C002022Lsi02G001140Bottle gourd (USVL1VR-Ls)lsimeB179
MELO3C002022CsGy1G005770Cucumber (Gy14) v2cgybmeB022
MELO3C002022CsaV3_1G005920Cucumber (Chinese Long) v3cucmeB024
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002022Cucumber (Gy14) v2cgybmeB332
MELO3C002022Cucumber (Gy14) v2cgybmeB333
MELO3C002022Silver-seed gourdcarmeB0102
MELO3C002022Silver-seed gourdcarmeB0247
MELO3C002022Silver-seed gourdcarmeB0393
MELO3C002022Silver-seed gourdcarmeB0598
MELO3C002022Cucumber (Chinese Long) v3cucmeB026
MELO3C002022Cucumber (Chinese Long) v3cucmeB396
MELO3C002022Cucumber (Chinese Long) v3cucmeB397
MELO3C002022Watermelon (97103) v2mewmbB161
MELO3C002022Watermelon (97103) v2mewmbB164
MELO3C002022Wax gourdmewgoB148
MELO3C002022Wax gourdmewgoB187
MELO3C002022Melon (DHL92) v3.5.1memeB011
MELO3C002022Melon (DHL92) v3.5.1memeB024
MELO3C002022Melon (DHL92) v3.5.1memeB066
MELO3C002022Melon (DHL92) v3.5.1memeB070
MELO3C002022Cucumber (Gy14) v1cgymeB267
MELO3C002022Cucumber (Gy14) v1cgymeB361
MELO3C002022Cucumber (Gy14) v1cgymeB475
MELO3C002022Cucumber (Gy14) v1cgymeB538
MELO3C002022Cucurbita maxima (Rimu)cmameB090
MELO3C002022Cucurbita maxima (Rimu)cmameB193
MELO3C002022Cucurbita maxima (Rimu)cmameB265
MELO3C002022Cucurbita maxima (Rimu)cmameB357
MELO3C002022Cucurbita maxima (Rimu)cmameB670
MELO3C002022Cucurbita maxima (Rimu)cmameB671
MELO3C002022Cucurbita moschata (Rifu)cmomeB084
MELO3C002022Cucurbita moschata (Rifu)cmomeB180
MELO3C002022Cucurbita moschata (Rifu)cmomeB351
MELO3C002022Cucurbita moschata (Rifu)cmomeB663
MELO3C002022Cucurbita moschata (Rifu)cmomeB664
MELO3C002022Wild cucumber (PI 183967)cpimeB026
MELO3C002022Wild cucumber (PI 183967)cpimeB383
MELO3C002022Wild cucumber (PI 183967)cpimeB384
MELO3C002022Cucumber (Chinese Long) v2cumeB030
MELO3C002022Cucumber (Chinese Long) v2cumeB388
MELO3C002022Cucumber (Chinese Long) v2cumeB389
MELO3C002022Watermelon (Charleston Gray)mewcgB156
MELO3C002022Watermelon (Charleston Gray)mewcgB159
MELO3C002022Watermelon (97103) v1mewmB153
MELO3C002022Watermelon (97103) v1mewmB180
MELO3C002022Cucurbita pepo (Zucchini)cpemeB029
MELO3C002022Cucurbita pepo (Zucchini)cpemeB391
MELO3C002022Cucurbita pepo (Zucchini)cpemeB392
MELO3C002022Cucurbita pepo (Zucchini)cpemeB478
MELO3C002022Cucurbita pepo (Zucchini)cpemeB602
MELO3C002022Bottle gourd (USVL1VR-Ls)lsimeB287
MELO3C002022Bottle gourd (USVL1VR-Ls)lsimeB391
MELO3C002022Cucumber (Gy14) v2cgybmeB024