Lsi11G016590 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACAGTCCAATATTCTTTATTATTTACTGGTATATCCCATGCCTAGGGCTTTCCTCTCTATAAAGCCATTTGACATTCAATTGAATAAAATATAGAAAACAAAGACGAAAGACTTTCTCCCAAAATCACAGCTCCATCTTCCTTATTTCTCACTCGTCACTCTTGGCGCTCGGCTAAATCGTACACAGTAGACTTCTTCCCTTCAATCAACGGCGACCGACCAACCACTGATACGAGGCTGACGACGTTCGACGGCGACTTGATGTATTACGGCGTTCGGCGGCGCGGGTTTTGACGGCTCTGGGTTCGACGGTGTTCGGCGTCCGGCGGCCTTGTGTTCGACAACTTACGGCTCCAGTTGAGGCGTCGGCTGAGTTGTGGTCGCAGTGCAAAACGCTTTATCCATAGTGAGACAAACGGCGTTAGATAAACCTAGCATCTCTAACTCACTAAGATCCCGATTTGAAATTTTGGTCGGTTCTTTGTCAAAGGTATTCTCTATTCTTTTCCTTATTTATTAATTTTTACCCCAAATTGCTTCTTTATTCTTTAATGGTTGTGAATAGATATGTTTTAGGCAACAAAATATCATGATTTGGAAAGAAAATCTGTGTATTTAGAAACTTATGCTGCTGAATTGTATATTATTATTAGAAATTGACAAACTTTATTATTTGATTTTTTATTTTAAAGATTGACAATTATGCAATAAACCATAGTTAGATAAACTAAGATAAGAGGGAGGGACGAAGACATGGCGTGATTGAACAATAGATGTTATTGGTGGAGGTTTGGGAATTACGATTGTTGGGTTTGGAGTTTTGGATATGGCGGAGTTTGTTTTTGCTTTTGAATTTTCTGGTTTGAAACCAATAAAAAACATTGGCATCACCCACTTGCCCATATTGTTTCAATTGAGAAATAAGGAAGATGGATTGCCCATATTGTTTCAATTGAGCTCTACTTTTACTGATTTCATCTATATAAAGATTTACCATCCCATAATTGAAAATTGCTTCAAGAATTCTTATTTGCTCGGGTTTTAAATTCCATCCTAGTTTTGGCTTTGGACTTCTCTCTTCACATCCCCCAATTGGAAAAAAAAAATCACAATTTGATCAAAAAGAGAAAAAGTAACAAAAGAACTAAATTGAATAAGTAGATTCAAGAAAGATTAGTGTTGATGTCATGTTGCCATTGGTGGTGAGAATTGCAAGGTTTGGACTTGAAGATGCTAGGCCAGTGTCTGTTTGATGAAGCCATGAATTGCCTTTTTGTTGCCTATGATATGATGATATTTGAATATGCCTGCTGCTGTATATTTGTTGATAGTTGTAAATATGTGGAATGAGTTTGACAATGTTGATTTTGAAGTGATTGTGGTTCGTATATGTGATATATATCTATTAGTTTATCAATATGGACCTGGATGAATCTAAGATTTTTTTTTTAAATTTTTTAACTTTTTTTTTAATTTTCTTTTATTTGATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATATATATATATATATTCTTTTATTTTTTAAAATTAGGTGAAATATAGGGAAGTTAAACCAATTCCAATTTTTAAAACTTAATCTTAGTTAATTTAAGTTAACCAATTCCAATTCTCATAACATTAGTGTAAAATTTATCCCCTACCCTAAAATCAAATCGTAATGGTTGAAAAATGGAATTTTTTTAATAAAAGAAAATTTATAAAATTACTGTAAAATTTCTTGTACTACTCCTAACAATCCTTATAGTAAGTACCAACAAATTTTTTAATAAGGAAAAATTGAAGGCAAATATGTGGAATAAGGAAAATTCAGAGGTTACCCAACATAGGATTGCTATCGGCTAAGCACATTCCTATAATTAAGCCATCGAAAAGGAATCACCTTCTTAGTATAATTAGTAACTTTCAATTTTTTTAAGCTTGCTCATTTATGTTTCCCTCCTGGAACTTGGGTTGTTACATCAAAATCCACAAGCATTATTAACGTTACTAATTCCGCAACATAAAATCTTCAAAACCAGAAAACAGGAATAAATTTCAGTACAAACAAATTCAAATCAATTTTATTCATAAAACAAAGGTCAATCAATCAAACCTAATAAAGATCATATTTCACATTGTTTTCTTTGTTGTTATTTTTGTTTGCTAACTCACCTAAATTTTAATTATAATTTAATATAACATGGATCTTTTTAAAATTTTATTAAAATTACAAGGATCAAAATGAAACCATTGTTAAAATATAGAAACTAAAATAATATTTTTACGTAAATTTAATCCGTAAATTTAATCCATGAAATTTGTATGATGTTTATGGCCAACTAGATATTGGCCTACAAAAGGGGGACACACTTTTGCTTGATACACTTCTTTAATCGATGAAAGCTATGAAGGCTTTGATTAGTACACAAAAAAAAAGACATGCGTTCCTGCTGCAGAAGCTTTATCTGTGACGGTTAAATAATTTGCTTCTTCGTCTCATTTAGGCGCTTTCACTTTCCGGCATGGACGTTTTGGGCGGAGGCAATGGCGGCCTCTGGGGCTGGAACTTCCTCCTTCCCGATTTCAAAACTTCTCAAAACAAGAAGAGAAGATTTGAGCCCAAATCCTCTAATTCCTTGCAGGCAACTGGTGGATCTGCTTACACTTTCCCTATAAAGCAGTACTCGACGGCCGGCTGTCTCGCTCTCACCGGCGACATTATTGCTCAGTCCATAAGCCGATGGCGTAAGGGAATCGCTTTGAATTCCACTTCTCTTTCTGATTCTGCCTCTGCCAATAAGGTTAGTTTCCGTCTTTTTTATTCTGGACTTCAATTAATTAATTTCCAGTAATTTTGAAATTGGAATTTTTCTGTAATCGGAGACTTAGGGTATGGTTGTTTCTTTGTTCTTATTTCGTAATGTACATGTTTGTGGCCGCTCAAGTTTTCTGGGCCAGTACTTTCAATTTTACCTGTTTGTACTTCAACATGCCAATTCTCTTGGACTGAACTGTAGAACTGTTGTCTGCAGTAGATAATTTTTTTAGGGCATTTGCTCTATGCATGCTGGATCTACCGCTTCTGGCCTACAATGCTTCTGTTTAAAACCTCATTGATGCATTTCTGATGTGGTCTTTAACTAAGTTTTTTGGATCAAAACTCTCTTTTCAGATGAACATATTTTCAGAACATGATTGGGTTCGGTCTTTGCGGATGGCTTCTTATGGGTTTCTACTTTATGGTCCAGGATCCTATGCATGGTACAACTATCTTGATCGCGTTTTGCCCAAGAAATCAGTGGAGAACCTTATTCTTAAGGTACCACTGGTTGTGAGTTTGGTGTTAATAATTCTTATCTCTTAGCTCTTGGCAGCTGAAGTTGAGGATCAAGCATATATAACAGTTCTATGAACTTTTTTCTTAATTGATTTTTCTTCAGGTTATCTTGAACCAAATTGTTCTTGGTCCATGCGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAAATCTCCCAGCTTCCTGACATGTATCGAAAAGATGCTCTTCCTACATTGTCATTTGGTAAGAAACGTCTCTGGCTAGGGCCTTTTGTTGCCTCAAAGACATAAGTGTAATGAAATTGCTTTTTGATCTCTTTGCAGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGTAATTGTTCATATTTAGTTACCCCCGTGGGGTTCTCTTCCAATTACTCAATAAACTATTTTTTTTTTAATAATAAAAAAAAGGCCAAGCTTTCATGAGGTTGAATGAAAGAACAATCAAAGAACATTTGAAGCCACTTAAGTTGTTGTACTTCGGAACAGTGCTTTTAGTCAGTTACAGTGTCCTGAATTTTGTTGATATAGTTAAACCTGTTGTTAATGAGTCGAAATAACTTGTAACACAATATCATCTTTTACTCTGCGATGTTTCTATATCTTTAAACCATAAAAGTATCTAATCTCGTTCCAATGTGCCCGATGAACCTGGTACATGTTTTATTCTCATGAAGAGTAGAAACTTAAGGATTTGAGAGTCAACCTTCTCTGTTTATAACTCTTGCAACTGCATATTCGTGTTATGAATTAGGGATTAGTGACTAAGGACATTATCCAGAATTTGACTGAACCACTTGTGTCATCTTACAGGGTTGTGCCTCTCCAAGCCCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAATGATTCAATCTAGGAATTTTAATAAGTTGTCATTTATCATCTGTAGTTCTATTTATGGACTCGATTCTCAGTATAAATAATAGTTGTGGTAGATCAGAAACACGTTAAATGGCAAATGCTATTATTTGGAACTGCTTTTGCATTTAATGGATTGTCCTTCAGATCTACTAAACAAAATTTTGATTTCCAAGTGTAAAATCAATTGCTTTGCTCTTGCTGAAGAGCATCACAAATATGTCTCCTCCTTCCCTCCCTCCTTTCTCTACCCCCTTCTTCCACCCCTTACATTGTAGCAATCTTCATTACCTGTAATAGTTGGACATTGTTTTGATGTAATATTATTATGATTTTGAAGTTACTGTGTTAGTACTCCAATTGGATGGCATTTTCAATCTATCAGCTTC TACAGTCCAATATTCTTTATTATTTACTGGTATATCCCATGCCTAGGGCTTTCCTCTCTATAAAGCCATTTGACATTCAATTGAATAAAATATAGAAAACAAAGACGAAAGACTTTCTCCCAAAATCACAGCTCCATCTTCCTTATTTCTCACTCGTCACTCTTGGCGCTCGGCTAAATCGTACACAGTAGACTTCTTCCCTTCAATCAACGGCGACCGACCAACCACTGATACGAGGCTGACGACGTTCGACGGCGACTTGATGTATTACGGCGTTCGGCGGCGCGGGTTTTGACGGCTCTGGGTTCGACGGTGTTCGGCGTCCGGCGGCCTTGTGTTCGACAACTTACGGCTCCAGTTGAGGCGTCGGCTGAGTTGTGGTCGCAGTGCAAAACGCTTTATCCATAGTGAGACAAACGGCGTTAGATAAACCTAGCATCTCTAACTCACTAAGATCCCGATTTGAAATTTTGGTCGGTTCTTTGTCAAAGGCGCTTTCACTTTCCGGCATGGACGTTTTGGGCGGAGGCAATGGCGGCCTCTGGGGCTGGAACTTCCTCCTTCCCGATTTCAAAACTTCTCAAAACAAGAAGAGAAGATTTGAGCCCAAATCCTCTAATTCCTTGCAGGCAACTGGTGGATCTGCTTACACTTTCCCTATAAAGCAGTACTCGACGGCCGGCTGTCTCGCTCTCACCGGCGACATTATTGCTCAGTCCATAAGCCGATGGCGTAAGGGAATCGCTTTGAATTCCACTTCTCTTTCTGATTCTGCCTCTGCCAATAAGATGAACATATTTTCAGAACATGATTGGGTTCGGTCTTTGCGGATGGCTTCTTATGGGTTTCTACTTTATGGTCCAGGATCCTATGCATGGTACAACTATCTTGATCGCGTTTTGCCCAAGAAATCAGTGGAGAACCTTATTCTTAAGGTTATCTTGAACCAAATTGTTCTTGGTCCATGCGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAAATCTCCCAGCTTCCTGACATGTATCGAAAAGATGCTCTTCCTACATTGTCATTTGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGGTTGTGCCTCTCCAAGCCCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAATGATTCAATCTAGGAATTTTAATAAGTTGTCATTTATCATCTGTAGTTCTATTTATGGACTCGATTCTCAGTATAAATAATAGTTGTGGTAGATCAGAAACACGTTAAATGGCAAATGCTATTATTTGGAACTGCTTTTGCATTTAATGGATTGTCCTTCAGATCTACTAAACAAAATTTTGATTTCCAAGTGTAAAATCAATTGCTTTGCTTTTGAAGTTACTGTGTTAGTACTCCAATTGGATGGCATTTTCAATCTATCAGCTTC ATGGACGTTTTGGGCGGAGGCAATGGCGGCCTCTGGGGCTGGAACTTCCTCCTTCCCGATTTCAAAACTTCTCAAAACAAGAAGAGAAGATTTGAGCCCAAATCCTCTAATTCCTTGCAGGCAACTGGTGGATCTGCTTACACTTTCCCTATAAAGCAGTACTCGACGGCCGGCTGTCTCGCTCTCACCGGCGACATTATTGCTCAGTCCATAAGCCGATGGCGTAAGGGAATCGCTTTGAATTCCACTTCTCTTTCTGATTCTGCCTCTGCCAATAAGATGAACATATTTTCAGAACATGATTGGGTTCGGTCTTTGCGGATGGCTTCTTATGGGTTTCTACTTTATGGTCCAGGATCCTATGCATGGTACAACTATCTTGATCGCGTTTTGCCCAAGAAATCAGTGGAGAACCTTATTCTTAAGGTTATCTTGAACCAAATTGTTCTTGGTCCATGCGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAAATCTCCCAGCTTCCTGACATGTATCGAAAAGATGCTCTTCCTACATTGTCATTTGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGGTTGTGCCTCTCCAAGCCCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAATGA MDVLGGGNGGLWGWNFLLPDFKTSQNKKRRFEPKSSNSLQATGGSAYTFPIKQYSTAGCLALTGDIIAQSISRWRKGIALNSTSLSDSASANKMNIFSEHDWVRSLRMASYGFLLYGPGSYAWYNYLDRVLPKKSVENLILKVILNQIVLGPCVIGVVFAWNSLWLGKISQLPDMYRKDALPTLSFGVRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK
BLAST of Lsi11G016590 vs. Swiss-Prot
Match: MPV17_DANRE (Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12 Identity = 48/177 (27.12%), Postives = 79/177 (44.63%), Query Frame = 1
BLAST of Lsi11G016590 vs. Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.5e-12 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 1
BLAST of Lsi11G016590 vs. Swiss-Prot
Match: SYM1_GIBZE (Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.1e-11 Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 1
BLAST of Lsi11G016590 vs. Swiss-Prot
Match: PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10 Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 1
BLAST of Lsi11G016590 vs. Swiss-Prot
Match: MP17L_BOVIN (Mpv17-like protein OS=Bos taurus GN=MPV17L PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09 Identity = 33/122 (27.05%), Postives = 61/122 (50.00%), Query Frame = 1
BLAST of Lsi11G016590 vs. TrEMBL
Match: A0A0A0KEM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421720 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.7e-108 Identity = 195/229 (85.15%), Postives = 210/229 (91.70%), Query Frame = 1
BLAST of Lsi11G016590 vs. TrEMBL
Match: W9RQG4_9ROSA (Protein Mpv17 OS=Morus notabilis GN=L484_021365 PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.3e-80 Identity = 157/232 (67.67%), Postives = 183/232 (78.88%), Query Frame = 1
BLAST of Lsi11G016590 vs. TrEMBL
Match: A0A0D2SY56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G099400 PE=3 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75 Identity = 148/229 (64.63%), Postives = 174/229 (75.98%), Query Frame = 1
BLAST of Lsi11G016590 vs. TrEMBL
Match: M1BGG0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017313 PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 4.2e-75 Identity = 147/232 (63.36%), Postives = 174/232 (75.00%), Query Frame = 1
BLAST of Lsi11G016590 vs. TrEMBL
Match: V4M9K7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017191mg PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74 Identity = 142/232 (61.21%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of Lsi11G016590 vs. TAIR10
Match: AT2G42770.1 (AT2G42770.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 281.2 bits (718), Expect = 5.7e-76 Identity = 141/233 (60.52%), Postives = 172/233 (73.82%), Query Frame = 1
BLAST of Lsi11G016590 vs. TAIR10
Match: AT5G43140.1 (AT5G43140.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16 Identity = 38/124 (30.65%), Postives = 69/124 (55.65%), Query Frame = 1
BLAST of Lsi11G016590 vs. TAIR10
Match: AT4G33905.1 (AT4G33905.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 37/130 (28.46%), Postives = 65/130 (50.00%), Query Frame = 1
BLAST of Lsi11G016590 vs. TAIR10
Match: AT2G14860.1 (AT2G14860.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11 Identity = 34/125 (27.20%), Postives = 62/125 (49.60%), Query Frame = 1
BLAST of Lsi11G016590 vs. NCBI nr
Match: gi|659097194|ref|XP_008449492.1| (PREDICTED: protein sym-1 [Cucumis melo]) HSP 1 Score: 407.1 bits (1045), Expect = 2.0e-110 Identity = 200/229 (87.34%), Postives = 212/229 (92.58%), Query Frame = 1
BLAST of Lsi11G016590 vs. NCBI nr
Match: gi|449444741|ref|XP_004140132.1| (PREDICTED: protein sym-1 [Cucumis sativus]) HSP 1 Score: 400.2 bits (1027), Expect = 2.4e-108 Identity = 195/229 (85.15%), Postives = 210/229 (91.70%), Query Frame = 1
BLAST of Lsi11G016590 vs. NCBI nr
Match: gi|703120576|ref|XP_010102131.1| (Protein Mpv17 [Morus notabilis]) HSP 1 Score: 306.2 bits (783), Expect = 4.7e-80 Identity = 157/232 (67.67%), Postives = 183/232 (78.88%), Query Frame = 1
BLAST of Lsi11G016590 vs. NCBI nr
Match: gi|658015485|ref|XP_008343081.1| (PREDICTED: peroxisomal membrane protein 2-like [Malus domestica]) HSP 1 Score: 302.0 bits (772), Expect = 8.9e-79 Identity = 152/227 (66.96%), Postives = 174/227 (76.65%), Query Frame = 1
BLAST of Lsi11G016590 vs. NCBI nr
Match: gi|694408540|ref|XP_009378948.1| (PREDICTED: protein Mpv17-like [Pyrus x bretschneideri]) HSP 1 Score: 300.4 bits (768), Expect = 2.6e-78 Identity = 150/227 (66.08%), Postives = 176/227 (77.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |