CsGy6G021960 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G021960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionProtein Mpv17
LocationChr6 : 22533461 .. 22536080 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGATAGTAAATATTTTGTGAAATTTGGGATTGAAATTGAAGCAAAAGGAATATTGTATTTGAACTAAAAATGGATAGTGTAAGATATTTTTGAGTAGCAAGTATTGATTGGGGTCACGTTTATCGATTAAAGGTTCGATGAGTTAGCTTAGTACACAAAAAAAACACATGCCTTGCCGCGGCACAAGAAAGCAGCCGGACTCTTCATCTCTGACGGTTAAATAGTTTCCTCCGTCCTCACATACTTGCTACCCTCTTTCCCTTTCCGGCATGGATGCTTTCAGCGGAGGCAATGGCGGCCTCTGGGCCTGGAACTTCCTCCTTTCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCAACTGGTGGATCTGGTTTTCGTTTCCCTCTTAAGCAGTACATCACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATCGCTCAGTTCATTGGCCGGTATCGTAAAGGAATCGCTTTGAATTCCACTGCTCTCTCTGATTCTGCCTCTGCCGACAAGGTTAGCTTCCCTCTCTTTGGTTCTTCACTCCAATTGATTGTTTTCTTGTAATTTTGAATTTCGAATTGTTCTGTATTTGGTAACTTAGGGCATGCTTGGTTCTTTGTTCGTAATTTGTATTGTGCATGTTTGTGGTGTCTGCTCAAGTTTTCTGGGCCGCCACTGTCAATTTTACCTGTTTGGACTTGAATGGGCCAATTTTCTTGGACTGAACGGTGGAACTGGAACTGTTGCTATTAAATATATTTGTTTTTCATTCTGTCTATAGTAGATTTTTTTTTTTTTTTTTTTTTTGTGATGCATTTCTGATGTGGTCTCTAACCGTTTATTTTTCTTGGATCAAAATTCTTTTTCCAGATGAACATATTTTCAGAACATGATTGGATCCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCAGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTACAGTTGATTGTGTGTTTAATTCTTATCTTAGTGTCTGAAGTTGAACATCAAGCATATACAACAAGTTCTATGAAATTTTTTCATAATTGTTTCTTCTTCAGGTTGTCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCGACATTGTCATATGGTAAAAAAAAAAACGTCTCTGATTAGGGCCTTTTGTTGCCTAAGAACACAAGTGTAATGAAATCACTTTTTTTTTTTAATCTCTTTTGCAGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGTAATTATTCTTATTTAGTTACCCCCATGTGGGTTCTCTTCCTATTACTCACGTTTTCATTATGAAAAATGGCTAACCTTAAAAAGATGGTCGTTTGTTCTAGTATTCTCTCTCATCTTTTGATAGACTTTTTGGATGTTGTTTTGTCTACTGCTTTTTCCGGAACAGGGCCTTCACTCAATTACATTGTCCAGAATTTTGTTAATATAGTTAACCTATAGTAAATGAGTCAAAACAGTAACACAATATCATCTTTTAAAAATCTGTGTATATAAGACAGACATCACTGATCTACAATGTTTCAAATCTTTGAACCACAAAATTATTCATCTGATCTCCTTCTGATGGGCCCGATGAACCTGGTATGTGTTCTATTCTCATGAAGAGTAAAAACTTGAGGATTTGAGAGTGAGCCATTCTCTGTTTATAACTCTTGCAATTGCATGTTCGTGTTTTGAATTAGTGAGGACATTATCCTGAATTTGACCGAACCATTTGTGACATCTTACAGGGTCGTGCCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGATTCAGTCTAGGAAAATTCTTAAGCTCCATGTGCAAGAGCAAGGCTGCACTTAGGAGATTTTACAATAAGTTGTGCGTTATGCCATTTATTATCTATAGTTCTAGTTATGAACTCAATTCCCAGTTAGCTGTGGTAGATCAGAAACACATTCAATAGCAAATGCTATCATTTCCAAATGCTTTTGCATTTAATGGATTGTGCTTCAGATCTACTAAACATAATTTTGTTTCCTAAATGTAGACAATAATTGCTTTGCTCTTGTTGAACAGCATTGCAAATATATTTCCTCTCTCCCTTTTTTACCTTCTTCCATCCCATTGTACCAATCTTCATTATCTGTAGTGATTGGATATTATTTTGATGTAATATTTTGGTTGTGAAGTTCTGTGTTAGTACTTCAATTTGAGGGTATTTTCTATCTATCAGCTTCAACACTAAGGTTTTCTTTTTGTCTTGGGATTAACATCTGACATCCTACCAAAAGCTTTTGCTGTTTAACTAGAACTGAATAATTAGATTGAATGTAGTAACATATATATAACCAAAAAAAATTAAAAGGCAAACAATTTTTTTTTCTAGAAATAGGTGCAAGTATA

mRNA sequence

GATGATAGTAAATATTTTGTGAAATTTGGGATTGAAATTGAAGCAAAAGGAATATTGTATTTGAACTAAAAATGGATAGTGTAAGATATTTTTGAGTAGCAAGTATTGATTGGGGTCACGTTTATCGATTAAAGGTTCGATGAGTTAGCTTAGTACACAAAAAAAACACATGCCTTGCCGCGGCACAAGAAAGCAGCCGGACTCTTCATCTCTGACGGTTAAATAGTTTCCTCCGTCCTCACATACTTGCTACCCTCTTTCCCTTTCCGGCATGGATGCTTTCAGCGGAGGCAATGGCGGCCTCTGGGCCTGGAACTTCCTCCTTTCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCAACTGGTGGATCTGGTTTTCGTTTCCCTCTTAAGCAGTACATCACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATCGCTCAGTTCATTGGCCGGTATCGTAAAGGAATCGCTTTGAATTCCACTGCTCTCTCTGATTCTGCCTCTGCCGACAAGATGAACATATTTTCAGAACATGATTGGATCCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCAGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTTGTCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCGACATTGTCATATGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGTAATTATTCTTATTTAGTTACCCCCATGTGGGTTCTCTTCCTATTACTCACGTTTTCATTATGAAAAATGGCTAACCTTAAAAAGATGGTCGTTTGTTCTAGTATTCTCTCTCATCTTTTGATAGACTTTTTGGATGTTGTTTTGTCTACTGCTTTTTCCGGAACAGGGCCTTCACTCAATTACATTGTCCAGAATTTTGTTAATATAGTTAACCTATAGTAAATGAGTCAAAACAGTAACACAATATCATCTTTTAAAAATCTGTGTATATAAGACAGACATCACTGATCTACAATGTTTCAAATCTTTGAACCACAAAATTATTCATCTGATCTCCTTCTGATGGGCCCGATGAACCTGGTATGTGTTCTATTCTCATGAAGAGTAAAAACTTGAGGATTTGAGAGTGAGCCATTCTCTGTTTATAACTCTTGCAATTGCATGTTCGTGTTTTGAATTAGTGAGGACATTATCCTGAATTTGACCGAACCATTTGTGACATCTTACAGGGTCGTGCCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGATTCAGTCTAGGAAAATTCTTAAGCTCCATGTGCAAGAGCAAGGCTGCACTTAGGAGATTTTACAATAAGTTGTGCGTTATGCCATTTATTATCTATAGTTCTAGTTATGAACTCAATTCCCAGTTAGCTGTGGTAGATCAGAAACACATTCAATAGCAAATGCTATCATTTCCAAATGCTTTTGCATTTAATGGATTGTGCTTCAGATCTACTAAACATAATTTTGTTTCCTAAATGTAGACAATAATTGCTTTGCTCTTGTTGAACAGCATTGCAAATATATTTCCTCTCTCCCTTTTTTACCTTCTTCCATCCCATTGTACCAATCTTCATTATCTGTAGTGATTGGATATTATTTTGATGTAATATTTTGGTTGTGAAGTTCTGTGTTAGTACTTCAATTTGAGGGTATTTTCTATCTATCAGCTTCAACACTAAGGTTTTCTTTTTGTCTTGGGATTAACATCTGACATCCTACCAAAAGCTTTTGCTGTTTAACTAGAACTGAATAATTAGATTGAATGTAGTAACATATATATAACCAAAAAAAATTAAAAGGCAAACAATTTTTTTTTCTAGAAATAGGTGCAAGTATA

Coding sequence (CDS)

ATGGATGCTTTCAGCGGAGGCAATGGCGGCCTCTGGGCCTGGAACTTCCTCCTTTCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCAACTGGTGGATCTGGTTTTCGTTTCCCTCTTAAGCAGTACATCACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATCGCTCAGTTCATTGGCCGGTATCGTAAAGGAATCGCTTTGAATTCCACTGCTCTCTCTGATTCTGCCTCTGCCGACAAGATGAACATATTTTCAGAACATGATTGGATCCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCAGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTTGTCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCGACATTGTCATATGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGTAA

Protein sequence

MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFW
Homology
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BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_004140132.1 (PREDICTED: protein sym-1 [Cucumis sativus] >KGN47978.1 hypothetical protein Csa_6G421720 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 1.4e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTLSYGVRFWIPVSILNFW
Sbjct: 181 ALPTLSYGVRFWIPVSILNFW 201

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BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_008449492.1 (PREDICTED: protein sym-1 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 3.5e-107
Identity = 191/201 (95.02%), Postives = 195/201 (97.01%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALNST+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTLSYGVRFWIPVSILNFW
Sbjct: 181 ALPTLSYGVRFWIPVSILNFW 201

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BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_022147925.1 (protein Mpv17 [Momordica charantia])

HSP 1 Score: 326.6 bits (836), Expect = 5.8e-86
Identity = 161/205 (78.54%), Postives = 178/205 (86.83%), Query Frame = 0 

Query: 1   MDAFSGG-NGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAG 60
           MD   GG +GGLW WNFLL   K+SR NKRR FEPKSSNSLEAT GSGFRFPLKQ + AG
Sbjct: 1   MDLLGGGSHGGLWGWNFLLPDPKTSR-NKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAG 60

Query: 61  CLTLSGDTIAQFIGRYRKGIALNSTALSDSASADK---MNIFSEHDWIRSLRMASYGFLL 120
           CL+LSGDTIAQFIGR+RKGIALNST+LS+SAS  +    NIFSEHDWIR+LRM SYGFLL
Sbjct: 61  CLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLSRDGFSNIFSEHDWIRALRMLSYGFLL 120

Query: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180
           YGPGSFAWYNYLDH LPK+SVENL+LKV+LNQ+VLGP VI VVFAWN++WLGK+SQLP+ 
Sbjct: 121 YGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDK 180

Query: 181 YRKDALPTLSYGVRFWIPVSILNFW 202
           YRKDALPTL YG RFWIPV ILNFW
Sbjct: 181 YRKDALPTLLYGFRFWIPVXILNFW 204

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BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_022930889.1 (protein Mpv17 isoform X2 [Cucurbita moschata])

HSP 1 Score: 317.0 bits (811), Expect = 4.6e-83
Identity = 153/201 (76.12%), Postives = 172/201 (85.57%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MD   GG+GGLW WNF L  S +SR NKRRSFE KSSNSL+ATGGSG++FPLKQ +TAGC
Sbjct: 1   MDLLGGGHGGLWGWNFFLPDSNTSR-NKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQ +GR+RK IALNS++L     +   NIFSEHDWIRSLRM SYG L+YGPG
Sbjct: 61  LTLSGDTIAQLVGRWRKEIALNSSSLEKDGVS---NIFSEHDWIRSLRMLSYGILIYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHV+PK+SV NL+LKV+LNQIVLGP VIG VFAWN++WLGK+SQLP MYRKD
Sbjct: 121 SFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTL YG RFWIPVSILNFW
Sbjct: 181 ALPTLLYGFRFWIPVSILNFW 197

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BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_022930888.1 (protein Mpv17 isoform X1 [Cucurbita moschata] >XP_023529297.1 protein Mpv17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.0 bits (811), Expect = 4.6e-83
Identity = 153/201 (76.12%), Postives = 172/201 (85.57%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MD   GG+GGLW WNF L  S +SR NKRRSFE KSSNSL+ATGGSG++FPLKQ +TAGC
Sbjct: 1   MDLLGGGHGGLWGWNFFLPDSNTSR-NKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQ +GR+RK IALNS++L     +   NIFSEHDWIRSLRM SYG L+YGPG
Sbjct: 61  LTLSGDTIAQLVGRWRKEIALNSSSLEKDGVS---NIFSEHDWIRSLRMLSYGILIYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHV+PK+SV NL+LKV+LNQIVLGP VIG VFAWN++WLGK+SQLP MYRKD
Sbjct: 121 SFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTL YG RFWIPVSILNFW
Sbjct: 181 ALPTLLYGFRFWIPVSILNFW 197

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BLAST of CsGy6G021960 vs. TAIR10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-60
Identity = 104/155 (67.10%), Postives = 128/155 (82.58%), Query Frame = 0 

Query: 47  GFRFPLKQYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRS 106
           G+RFPLKQ +TAG LT +GDTIAQ  GR++K  AL  ++ S+    +  NIFSEHDWIR+
Sbjct: 51  GYRFPLKQAVTAGALTFTGDTIAQLSGRWKKRTALKQSS-SELDEGELWNIFSEHDWIRA 110

Query: 107 LRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLW 166
           LRM+SYGFLLYGPGS+AWY +LDH LPK +  NL+LKV+LNQ++LGP+VI V+FAWN+LW
Sbjct: 111 LRMSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLW 170

Query: 167 LGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFW 202
           LGKLS+L   Y+KDALPTL YG RFW+PVSILNFW
Sbjct: 171 LGKLSELGNKYQKDALPTLLYGFRFWVPVSILNFW 204

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BLAST of CsGy6G021960 vs. TAIR10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 102 DWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFA 161
           D IR+ RMAS+G +  GP    W++YL  +LPK+ V     K+++ Q++ GP    V ++
Sbjct: 121 DLIRTARMASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYS 180

Query: 162 WNSLWLGKLS-QLPEMYRKDALPTLSYGVRFWIPVSILNF 201
           +N+   G+ S ++    ++D LPTL  G+ +W     + F
Sbjct: 181 YNAALQGENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTF 220

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BLAST of CsGy6G021960 vs. Swiss-Prot
Match: sp|Q54FR4|PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 0 

Query: 100 EHDWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVV 159
           ++D+ RS+RMA +GF + GP    W+ YLD   PKKS  +  +K+ ++Q+V  P    + 
Sbjct: 54  KYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLF 113

Query: 160 FAWNSLWLGK-LSQLPEMYRKDALPTLSYGVRFWIPVSILNF 201
           F+   +  GK    + E  +KD L T       W  ++ +NF
Sbjct: 114 FSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNF 155

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BLAST of CsGy6G021960 vs. Swiss-Prot
Match: sp|Q9NR77|PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 49.7 bits (117), Expect = 4.5e-05
Identity = 41/149 (27.52%), Postives = 66/149 (44.30%), Query Frame = 0 

Query: 52  LKQYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMAS 111
           L +  T+G L+  G+ +AQ I + RK    NS +L               D    LR A 
Sbjct: 35  LTKAATSGILSALGNFLAQMIEKKRK--KENSRSL---------------DVGGPLRYAV 94

Query: 112 YGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGK-L 171
           YGF   GP S  +Y +++H +P +     + +++L+++V  PA + + F   +   GK  
Sbjct: 95  YGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDA 154

Query: 172 SQLPEMYRKDALPTLSYGVRFWIPVSILN 200
           S      R    P L    R W P+  +N
Sbjct: 155 SAFAAKMRGGFWPALRMNWRVWTPLQFIN 166

[Close]
BLAST of CsGy6G021960 vs. Swiss-Prot
Match: sp|Q2KIK2|MP17L_BOVIN (Mpv17-like protein OS=Bos taurus OX=9913 GN=MPV17L PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 25/99 (25.25%), Postives = 48/99 (48.48%), Query Frame = 0 

Query: 102 DWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFA 161
           DW  +  +A+     +   ++ W N L+  LP ++   ++ KV+ +Q + GP  +   +A
Sbjct: 44  DWQHTRHVATVAVAFHANLNYVWLNLLERALPGRAPRTILAKVLCDQALGGPVYVSTFYA 103

Query: 162 WNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNF 201
             S+  GK     +M R+    T   G+ +W  V ++NF
Sbjct: 104 GMSILQGKDDIFLDM-RQKFWNTYKSGLMYWPFVQLINF 141

[Close]
BLAST of CsGy6G021960 vs. Swiss-Prot
Match: sp|Q2TXA2|SYM1_ASPOR (Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sym1 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 28/102 (27.45%), Postives = 50/102 (49.02%), Query Frame = 0 

Query: 100 EHDWIRSLRMASYGFLLYGPGSFAWYNYLD-HVLPKKSVENLILKVVLNQIVLGPAVIGV 159
           +HD+ R+ RMA YG  ++GP +  W+ +L  +V+ K S   ++ +V  +Q +  P  +  
Sbjct: 43  KHDFARTGRMALYGGAIFGPAATTWFGFLQRNVVLKNSKATIVARVAADQCLFTPTHLTC 102

Query: 160 VFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNF 201
                ++  G  S   E +R   LP+    +  W  V  +NF
Sbjct: 103 FLTSMAIMEG--SDPIEKWRNSFLPSYKANLTIWPLVQGVNF 142

[Close]
BLAST of CsGy6G021960 vs. Swiss-Prot
Match: sp|Q4IPX8|SYM1_GIBZE (Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 31/104 (29.81%), Postives = 51/104 (49.04%), Query Frame = 0 

Query: 100 EHDWIRSLRMASYGFLLYGPGSFAWYNYLD---HVLPKKSVENLILKVVLNQIVLGPAVI 159
           +HD +R+ RMA YG  ++GP +  W+ +L    +V   K  E ++ +V  +Q+   P +I
Sbjct: 46  KHDLVRTGRMALYGGFVFGPVATTWFAFLARRVNVRNNKKAE-VLARVACDQLGFAPVMI 105

Query: 160 GVVFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNF 201
           GV  +  +   GK   + E   K   P L      W  V ++NF
Sbjct: 106 GVFLSSMATMEGK--SVKERIDKTWWPALKANWMVWPAVQVINF 146

[Close]
BLAST of CsGy6G021960 vs. TrEMBL
Match: tr|A0A0A0KEM8|A0A0A0KEM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 9.1e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTLSYGVRFWIPVSILNFW
Sbjct: 181 ALPTLSYGVRFWIPVSILNFW 201

[Close]
BLAST of CsGy6G021960 vs. TrEMBL
Match: tr|A0A1S3BLI4|A0A1S3BLI4_CUCME (protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.3e-107
Identity = 191/201 (95.02%), Postives = 195/201 (97.01%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALNST+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTLSYGVRFWIPVSILNFW
Sbjct: 181 ALPTLSYGVRFWIPVSILNFW 201

[Close]
BLAST of CsGy6G021960 vs. TrEMBL
Match: tr|A0A2I4GHU0|A0A2I4GHU0_9ROSI (protein Mpv17 isoform X1 OS=Juglans regia OX=51240 GN=LOC109007999 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.4e-64
Identity = 128/206 (62.14%), Postives = 153/206 (74.27%), Query Frame = 0 

Query: 1   MDAFSGGNGGLWAWN--FLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITA 60
           MDA  GG GGLW  N  F       S++N       KSS+S+EATG +G+RFPLKQ +TA
Sbjct: 1   MDALGGGLGGLWGLNSPFRKRADTGSKSNS------KSSDSVEATGRAGYRFPLKQAVTA 60

Query: 61  GCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADK---MNIFSEHDWIRSLRMASYGFL 120
           G L L+GDTIAQ   R+RKG ALN  ++SDS    K     + S+HDW+R+LRM SYGFL
Sbjct: 61  GSLALAGDTIAQLSERWRKGKALNQNSVSDSHGFTKDAMSTLLSDHDWLRALRMISYGFL 120

Query: 121 LYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPE 180
            YGPGS+AWY YLDH +PK++VEN++LKV+LNQIVLGP+VI VVFAWN+LW GK  QLPE
Sbjct: 121 FYGPGSYAWYQYLDHCMPKQTVENVMLKVLLNQIVLGPSVIAVVFAWNNLWQGKFLQLPE 180

Query: 181 MYRKDALPTLSYGVRFWIPVSILNFW 202
            Y+KDALPTL YG RFWIPVS LNFW
Sbjct: 181 KYQKDALPTLLYGFRFWIPVSALNFW 200

[Close]
BLAST of CsGy6G021960 vs. TrEMBL
Match: tr|A0A2P6RV03|A0A2P6RV03_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0131101 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.4e-64
Identity = 121/198 (61.11%), Postives = 151/198 (76.26%), Query Frame = 0 

Query: 6   GGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGCLTLSG 65
           GG+GG W W+ L    K     +R+ F+ KSSNS+EA GG  FRFPLKQ +TAG L L+G
Sbjct: 7   GGHGGFWGWDSLPKKPK----QQRKRFDSKSSNSVEANGGPCFRFPLKQAVTAGSLALTG 66

Query: 66  DTIAQFIGRYRKGIALNSTALSDSASADKMN--IFSEHDWIRSLRMASYGFLLYGPGSFA 125
           DTIAQ   R+RK   L+  +   + ++  +   + S+HDW+R+LRM SYGF+LYGPGS+A
Sbjct: 67  DTIAQLRDRWRKANTLDQQSSGSTPTSQDVTQVLLSDHDWLRALRMTSYGFVLYGPGSYA 126

Query: 126 WYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKDALP 185
           WY YLDH LP+K+V NL+LKV+LNQ+VLGP+VI VVFAWN+LW GKLSQLP+ YRKDALP
Sbjct: 127 WYQYLDHALPEKTVVNLLLKVLLNQVVLGPSVIAVVFAWNNLWQGKLSQLPDKYRKDALP 186

Query: 186 TLSYGVRFWIPVSILNFW 202
           TL YG RFWIPVS+LNFW
Sbjct: 187 TLLYGFRFWIPVSLLNFW 200

[Close]
BLAST of CsGy6G021960 vs. TrEMBL
Match: tr|W9RQG4|W9RQG4_9ROSA (Protein Mpv17 OS=Morus notabilis OX=981085 GN=L484_021365 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.2e-64
Identity = 130/203 (64.04%), Postives = 158/203 (77.83%), Query Frame = 0 

Query: 6   GGNGGLWAWNFLLSHSKSSRNNKRRSFE---PKSSNSLEATGGSGFRFPLKQYITAGCLT 65
           GGNGGLW  N L    ++ RN+KR+  E    K S+S+EATGGSG+RFP KQ +TAG L 
Sbjct: 7   GGNGGLWGSN-LPPRKRNRRNSKRQGRERSDSKLSDSVEATGGSGYRFPFKQAVTAGSLA 66

Query: 66  LSGDTIAQFIGRYRKG-IALNSTALSDS--ASADKM-NIFSEHDWIRSLRMASYGFLLYG 125
           L+GDTIAQ   R+R+   A   ++L+DS  AS D M ++ S+HDW+R+LRMASYGFLLYG
Sbjct: 67  LTGDTIAQLTHRWRRSKAAKQDSSLTDSRGASQDVMQSLLSDHDWLRALRMASYGFLLYG 126

Query: 126 PGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYR 185
           PGS+AWY YLD  LPK +V NL+LKV+LNQIVLGP VI VVFAWN+LW GKL+QLP+ Y+
Sbjct: 127 PGSYAWYQYLDRSLPKPTVRNLMLKVLLNQIVLGPCVIAVVFAWNNLWQGKLAQLPDKYQ 186

Query: 186 KDALPTLSYGVRFWIPVSILNFW 202
           KDALPTL YG RFWIPVS+LNFW
Sbjct: 187 KDALPTLFYGFRFWIPVSVLNFW 208

The following BLAST results are available for this feature:
BLAST of CsGy6G021960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140132.11.4e-111100.00PREDICTED: protein sym-1 [Cucumis sativus] >KGN47978.1 hypothetical protein Csa_... [more]
XP_008449492.13.5e-10795.02PREDICTED: protein sym-1 [Cucumis melo][more]
XP_022147925.15.8e-8678.54protein Mpv17 [Momordica charantia][more]
XP_022930889.14.6e-8376.12protein Mpv17 isoform X2 [Cucurbita moschata][more]
XP_022930888.14.6e-8376.12protein Mpv17 isoform X1 [Cucurbita moschata] >XP_023529297.1 protein Mpv17 [Cuc... [more]
BLAST of CsGy6G021960 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42770.12.3e-6067.10Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein[more]
AT5G43140.11.6e-1333.00Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein[more]
BLAST of CsGy6G021960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q54FR4|PX24D_DICDI1.5e-0832.35PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE... [more]
sp|Q9NR77|PXMP2_HUMAN4.5e-0527.52Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3[more]
sp|Q2KIK2|MP17L_BOVIN1.3e-0425.25Mpv17-like protein OS=Bos taurus OX=9913 GN=MPV17L PE=2 SV=1[more]
sp|Q2TXA2|SYM1_ASPOR1.7e-0427.45Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sym... [more]
sp|Q4IPX8|SYM1_GIBZE1.7e-0429.81Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL ... [more]
BLAST of CsGy6G021960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KEM8|A0A0A0KEM8_CUCSA9.1e-112100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1[more]
tr|A0A1S3BLI4|A0A1S3BLI4_CUCME2.3e-10795.02protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1[more]
tr|A0A2I4GHU0|A0A2I4GHU0_9ROSI2.4e-6462.14protein Mpv17 isoform X1 OS=Juglans regia OX=51240 GN=LOC109007999 PE=3 SV=1[more]
tr|A0A2P6RV03|A0A2P6RV03_ROSCH2.4e-6461.11Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0131101 PE=3... [more]
tr|W9RQG4|W9RQG4_9ROSA9.2e-6464.04Protein Mpv17 OS=Morus notabilis OX=981085 GN=L484_021365 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G021960.1CsGy6G021960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 1..201
NoneNo IPR availablePANTHERPTHR11266:SF37EXPRESSED PROTEINcoord: 1..201

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G021960Cla003261Watermelon (97103) v1cgybwmB419
CsGy6G021960Csa6G421720Cucumber (Chinese Long) v2cgybcuB281
CsGy6G021960MELO3C014448Melon (DHL92) v3.5.1cgybmeB432
CsGy6G021960ClCG09G020820Watermelon (Charleston Gray)cgybwcgB389
CsGy6G021960CSPI06G22740Wild cucumber (PI 183967)cgybcpiB287
CsGy6G021960CmaCh11G019430Cucurbita maxima (Rimu)cgybcmaB707
CsGy6G021960CmoCh11G020230Cucurbita moschata (Rifu)cgybcmoB691
CsGy6G021960Lsi11G016590Bottle gourd (USVL1VR-Ls)cgyblsiB392
CsGy6G021960Cp4.1LG04g02510Cucurbita pepo (Zucchini)cgybcpeB838
CsGy6G021960MELO3C014448.2Melon (DHL92) v3.6.1cgybmedB427
CsGy6G021960CsaV3_6G037870Cucumber (Chinese Long) v3cgybcucB298
CsGy6G021960Cla97C09G182240Watermelon (97103) v2cgybwmbB487
CsGy6G021960Bhi05G001793Wax gourdcgybwgoB539
CsGy6G021960Carg04649Silver-seed gourdcarcgybB0398
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G021960Wax gourdcgybwgoB585
CsGy6G021960Cucumber (Gy14) v2cgybcgybB152
CsGy6G021960Cucurbita maxima (Rimu)cgybcmaB780
CsGy6G021960Cucurbita maxima (Rimu)cgybcmaB796
CsGy6G021960Cucurbita maxima (Rimu)cgybcmaB826
CsGy6G021960Cucurbita moschata (Rifu)cgybcmoB759
CsGy6G021960Cucurbita moschata (Rifu)cgybcmoB774
CsGy6G021960Cucurbita moschata (Rifu)cgybcmoB807
CsGy6G021960Cucurbita pepo (Zucchini)cgybcpeB748
CsGy6G021960Cucurbita pepo (Zucchini)cgybcpeB775
CsGy6G021960Cucurbita pepo (Zucchini)cgybcpeB852
CsGy6G021960Cucumber (Chinese Long) v2cgybcuB285
CsGy6G021960Bottle gourd (USVL1VR-Ls)cgyblsiB386
CsGy6G021960Melon (DHL92) v3.5.1cgybmeB391
CsGy6G021960Melon (DHL92) v3.6.1cgybmedB377
CsGy6G021960Watermelon (Charleston Gray)cgybwcgB412
CsGy6G021960Watermelon (97103) v1cgybwmB487
CsGy6G021960Wild cucumber (PI 183967)cgybcpiB292
CsGy6G021960Silver-seed gourdcarcgybB0029
CsGy6G021960Silver-seed gourdcarcgybB0538
CsGy6G021960Cucumber (Chinese Long) v3cgybcucB303
CsGy6G021960Watermelon (97103) v2cgybwmbB417