Lsi11G016040 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G016040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Stigma/style cell cycle inhibitor
Location	chr11 : 24382804 .. 24386020 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATCCATCATCGAATTACAATAATAAAACCGTATTTTTAGTAAAATAATAAAAACTTTTCTAAAAAACCCTTCTGTTAACCGGAATGCTACGGCGGTGGACCAAATCGGTCATCGAAGCTTGAATCACCCAATTCACGATCTTTGTTCAATTTTGCTATGGCCGGAAGCGAAAGAAAATCCAAGGAGAAGAGGAAGCATAGAAAAGCGGCTTCATCTTCTGAAGGTACCCATTCCTGTTCTCCTTTTTTGTATGCATTTCCCCTCCTTTAATCTGTTTTTACTCAACTATTTTCAAGGAGTTCTCCCAAATAGAAGCATTACTCCTAGAGAACTTTACATTTCTGCTTTTCTTGGAGTGTATTCTCCAGTAATCTATGGTGGATTGCGCTGTATGTTGTGTTAATGCTATTGCTTGTAAAAGTTCAGAGGAGAAGAGGAGCAAGAGACCAAGAGCTGCAGAAAATGAGGAAAGGGAAAGCAGGAGTGATAAGAGAGAGAAGCGGAAGGAGAAGAAATCTCACAAGCACTCTAAACGCCACTCAGGTAAACTCGAACGGGCAATTTGCAGAAATATGCATGTTACGGTTCTTGTTTGGTATTATTATGTTTTATCTCATAGGTGGTCGTTTTCTTCTTCGTTGGTTATTTTATTTTATTTGAATTTGAATTAGAATTAATGGTATTGTACAAATTGCTTCAATTCAAAATTTAGGTTTTCTGGTATTAAACTGGTGTCGATACTATGGCTAAGTTAATTGAAATCAAAACCCTTCTATTTTTATATATTCTTTAAATTTATTCTCTCTGCTACTTTTTCTGTCTTTTTCTCCAAATTCATGTTTGGAAGGAACTTGTGGTTTCAAGAAAGAATATTATCCTGTAAGTATTTGAATACATGAGTTTTTACTTTTCCAGTTTTTCTACAGCAGCCTCATTGCAGATGCAGATGTAAAGTTCTAGTTGTTTTACTTATGAATGGGATTGTGAAGAAGTACTTTATAAATAGTTTTCCAAAGTAAAGATTTGTCATGCCCTGCCTTTTTCTCTCAGAGAAGAAGTCAAAGGATATTCACAAAGGCAAGCATCACAAGGGCGATCACCTTTCAGTGAGTTCTTCTGTAGTGATAAAGCACGTGCATTAGTTTATGTTTTAATTATTCTACTTTTACATTCATATGCTGGATTGTGCTATTGAGCATCCCTGCACTTTTCCTGTTTATTATTCTTAGATGGGATTGGAAAGTACAGAAGTAGGAAATGGATTACAATGCTCTATATAGGAAATTTCGATTTATCATGTTTGTGTTATTGTTGTTTTTCCCCCCTACTTCACTGCCTCTTAATTATTAACAATATATCTTGAGGTATTCAAATCTAGTAAATTTAGTATTAGATTATCCTATTTGGAGATTATCTTAAGTGGCCTCGAGATATGGTTAACTCAAATATAGCGAAGATAGTTAAAATGTCTGGAAAATATTGGATTGTTTTTCACTCTTCACTTTTTTAATTCATGAATCTGTGCAGCTGAACTCAATTTATGGGATCACTGGATGTGAGAGAGATTACGCAAGAATATAGTGGAGGAGATTTGTTATAGATTAATCTATGGAAGACACCAGGTAACTATTGGTTACTGGTGTCTAAGGATTTGGTTCAGGTATTTAGAGGGCTAGAAATTACTAATATAAGTTGCACAAGGGGAAGGTGCTTGCAAATTTGCAACCTAAATTCAGCTTCTCATAACTTGGGATTTTCTATTCTTTATTATATTTCTTTTGCTTTTTCACGTGAAAGAACCATTTTTAATATCAAATTGTTTGGTGCTATGCCACGGCATTAGGCTACTTGAATGTAGAAGTTAATGTTAATTTAGTTGCAATGAGGTTGCCCTATCACCTGTTCTGAAGTATTTTAACTATGCACTCCATTCCTTTATCTTATACATAAAACAGAAGTACAATTATGATACATGGTCCTAGAAAAAGTGAATTATTTAGCAGTGAGGTGGTTACTCTGAAGAATTAAATCAACCAAATCCTTTTCAAAGTGAATTATGGTGTCTTGATTGGACCAATAGGAGAAAGATCTTGGTTTTATCCATATTTGTTAGTTATTTGTCGCTTCTACCAAACTTCCTGCTTCTACAAATTTCTTTCCTGCCTCATCAGATTGTTGTGAACCTTGTGATATACTACATAATTCAGCCAGCTAATTACTGGCATGAGGCTTTATTGGGAATTTAAAAAAATTTCTAGGACTAGCAATCATTGCTGAAATTCAACTTTGCATCATTGTTTCCCACTTAAGCCTTGATTTGTTAGCTACTTCTACAGAACTCCTTCCAATATTCGTTCATCGTAGTATGAGAGGAAGATTTGATGCGACTGTATTTTTCTATTGCTTTTTCAGCAATTAAATGTAATGCCCTAGTTTATTTTAGTTTTTTCATTTTGGAATTAGAGAGTATATACTATGTCCTATTTCTTGTTATGGGGCTGTGACCCTCTGGATCTCTGGGCTTAATACTACTTTTGTTGATTAGAGTGCCAAAATTCAAGAACTGTCCAAGGAAGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAGAATGTGTACTTTTCTGATCTCTCGTCGGAGTCTGCTCGCGAACTTTTTTCAGATTTCATTGAACTGTGGAATGATCGAAAGCTTGAATCTCGATATTATGAGGGTATTTCAAGTGGGCCTCGGACATCCCATAACTGGAAAATCAAGGGGTGAAAACTTTAGCAAGCATGGATTGAACAAACAAAGAAACGAATGAACAAAGGTTGTCTGAATTGTTGCATTTTCCTGCTCTACTAGTAGTTTCCAGCCAGCTTATTGAATCTTCTTGCCAACACCGCATGTATAAGAGAGTTCCATGTCCTCTGTAGAATTTTAGCTTATCCTTGCTTTTAATATGGCAGTAAACTTTTCTTTCTTTGATGTAATGGAAAACGCAGAAATCAATTTTAGTTTATAGACTAAAATTACTTAGAAAGTTGTATTTTTTTTTTATTACTGAATGATGTGTGGCAGTGGAACTCTTTTATGTTGTCCTTTAAGGTGGTGGTAAAGGGTTTTTGGTAGTGCCTTTAAAAAGGTGCTTCCTAGGTGAAGGACGATTTTAGTTATAAATGGAGATTGTGGATTTGTAGTTGCCTTTCTTCTA

mRNA sequence

AATTAATCCATCATCGAATTACAATAATAAAACCGTATTTTTAGTAAAATAATAAAAACTTTTCTAAAAAACCCTTCTGTTAACCGGAATGCTACGGCGGTGGACCAAATCGGTCATCGAAGCTTGAATCACCCAATTCACGATCTTTGTTCAATTTTGCTATGGCCGGAAGCGAAAGAAAATCCAAGGAGAAGAGGAAGCATAGAAAAGCGGCTTCATCTTCTGAAGAGGAGAAGAGGAGCAAGAGACCAAGAGCTGCAGAAAATGAGGAAAGGGAAAGCAGGAGTGATAAGAGAGAGAAGCGGAAGGAGAAGAAATCTCACAAGCACTCTAAACGCCACTCAGAGAAGAAGTCAAAGGATATTCACAAAGGCAAGCATCACAAGGGCGATCACCTTTCAAGTGCCAAAATTCAAGAACTGTCCAAGGAAGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAGAATGTGTACTTTTCTGATCTCTCGTCGGAGTCTGCTCGCGAACTTTTTTCAGATTTCATTGAACTGTGGAATGATCGAAAGCTTGAATCTCGATATTATGAGGGTATTTCAAGTGGGCCTCGGACATCCCATAACTGGAAAATCAAGGGGTGAAAACTTTAGCAAGCATGGATTGAACAAACAAAGAAACGAATGAACAAAGGTTGTCTGAATTGTTGCATTTTCCTGCTCTACTAGTAGTTTCCAGCCAGCTTATTGAATCTTCTTGCCAACACCGCATGTATAAGAGAGTTCCATGTCCTCTGTAGAATTTTAGCTTATCCTTGCTTTTAATATGGCAGTAAACTTTTCTTTCTTTGATGTAATGGAAAACGCAGAAATCAATTTTAGTTTATAGACTAAAATTACTTAGAAAGTTGTATTTTTTTTTTATTACTGAATGATGTGTGGCAGTGGAACTCTTTTATGTTGTCCTTTAAGGTGGTGGTAAAGGGTTTTTGGTAGTGCCTTTAAAAAGGTGCTTCCTAGGTGAAGGACGATTTTAGTTATAAATGGAGATTGTGGATTTGTAGTTGCCTTTCTTCTA

Coding sequence (CDS)

ATGGCCGGAAGCGAAAGAAAATCCAAGGAGAAGAGGAAGCATAGAAAAGCGGCTTCATCTTCTGAAGAGGAGAAGAGGAGCAAGAGACCAAGAGCTGCAGAAAATGAGGAAAGGGAAAGCAGGAGTGATAAGAGAGAGAAGCGGAAGGAGAAGAAATCTCACAAGCACTCTAAACGCCACTCAGAGAAGAAGTCAAAGGATATTCACAAAGGCAAGCATCACAAGGGCGATCACCTTTCAAGTGCCAAAATTCAAGAACTGTCCAAGGAAGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAGAATGTGTACTTTTCTGATCTCTCGTCGGAGTCTGCTCGCGAACTTTTTTCAGATTTCATTGAACTGTGGAATGATCGAAAGCTTGAATCTCGATATTATGAGGGTATTTCAAGTGGGCCTCGGACATCCCATAACTGGAAAATCAAGGGGTGA

Protein sequence

MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKRHSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG

Homology

[Close]

BLAST of Lsi11G016040 vs. TrEMBL
Match: A0A0A0K434_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238960 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 8.4e-67
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 1


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESR-SDKREKRKEKKSHKHSKR 60
           MAGSERKSKEKRKHRK+ SSS+++KRSKRPRAAE+EERESR SDKREKRKEKKSHKHSKR
Sbjct: 1   MAGSERKSKEKRKHRKSVSSSDDDKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS AKIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRAKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of Lsi11G016040 vs. TrEMBL
Match: M5WI24_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012587mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.7e-41
Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 1


Query: 3   GSERKSKEKRKHRKAASSS--EEEKRSKRPRAAENEERESR-SDKREKRKEKK-SHKHSK 62
           GS+RKS+EK+K RK ++SS  E+E++ KR R  E+EER+SR SDK+EK K+KK SHKHSK
Sbjct: 2   GSDRKSEEKKKSRKRSTSSDSEDERKGKRRRPVEDEERKSRRSDKKEKSKDKKRSHKHSK 61

Query: 63  RHS--EKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSS 122
            HS  EKK+KD HK KHHKGD     + QELS +DYFSKNNEF+TWLK+EK+V+FSDLSS
Sbjct: 62  HHSDKEKKTKDKHKSKHHKGDRHLKIEFQELSTDDYFSKNNEFSTWLKEEKDVFFSDLSS 121

Query: 123 ESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           ESAR+LFSDF+++WN +KLES+YYEGI+SGPR +H WKIKG
Sbjct: 122 ESARQLFSDFVKVWNKQKLESKYYEGIASGPRCAHTWKIKG 162

[Close]

BLAST of Lsi11G016040 vs. TrEMBL
Match: A0A0D2VFA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G142800 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-38
Identity = 103/159 (64.78%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 3   GSERKSKEKRKHRKAASS-SEEEKRSKRPRAAENEERE----SRSDKREKRKEKKSHKHS 62
           GS+RK K  +K    +SS SE+E R KR R  E EE E     ++DK+EKRK+KKSHKHS
Sbjct: 2   GSDRKEKRSKKRSNYSSSGSEDEGRDKRQRRGEEEEEERKIRKKNDKKEKRKDKKSHKHS 61

Query: 63  KRHSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSE 122
             H EKKSK+ HK KHHKGD  S    QELS +DYFSKNNEFATWLK+EK V+FSDLSSE
Sbjct: 62  S-HKEKKSKEKHKSKHHKGDRHSKHGFQELSNDDYFSKNNEFATWLKEEKRVFFSDLSSE 121

Query: 123 SARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           SAR+LF+DF++ WN++KL S+YYEGI+SGPRT+HNWKIK
Sbjct: 122 SARDLFADFVKDWNNQKLGSQYYEGIASGPRTAHNWKIK 159

[Close]

BLAST of Lsi11G016040 vs. TrEMBL
Match: A0A0B0PHK7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_29903 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.2e-38
Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 1


Query: 3   GSERKSKEKRKHRKAASS-SEEEKRSKRPRAAENEERESRS----DKREKRKEKKSHKHS 62
           GS+RK    +K  K +SS SE+E R KR R  E EE E +S    DK+EKRK++KSHKHS
Sbjct: 2   GSDRKEMRSKKRSKFSSSGSEDEGRDKRQRRGEEEEEERKSRKKNDKKEKRKDQKSHKHS 61

Query: 63  KRHSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSE 122
             H EKK K+ HK KHHKGD  S    QELS +DYFSKNNEFATWLK+EK V+FSDLSSE
Sbjct: 62  S-HKEKKLKEKHKSKHHKGDRHSKHGFQELSNDDYFSKNNEFATWLKEEKRVFFSDLSSE 121

Query: 123 SARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           SARELF+DF++ WN++KL S+YYEGI+SGPRT+HNWKIK
Sbjct: 122 SARELFADFVKDWNNQKLGSQYYEGIASGPRTAHNWKIK 159

[Close]

BLAST of Lsi11G016040 vs. TrEMBL
Match: W9R2W8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016229 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 97/160 (60.62%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 3   GSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESR-SDKREK---RKEKKSHKHSK 62
           GS+RKSK+K+  ++++SS  EE+  ++   +E+EER+SR SDK+EK   + +K SHKHSK
Sbjct: 2   GSDRKSKDKKNRKRSSSSDSEEEGRRKRHKSEDEERKSRKSDKKEKVRDKDKKSSHKHSK 61

Query: 63  RHSEK--KSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSS 122
           RHS+K  KSKD HKGKH KG   S  + QELSK+DYFSKNNEFATWLK+EK V+FS+LSS
Sbjct: 62  RHSDKERKSKDKHKGKHRKGVRDSKHEFQELSKDDYFSKNNEFATWLKEEKRVFFSELSS 121

Query: 123 ESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           ESA E+FSDF++ WN++ LES+YYEGI++GPR++H W+IK
Sbjct: 122 ESAHEMFSDFVKAWNEQTLESKYYEGIATGPRSAHKWRIK 161

[Close]

BLAST of Lsi11G016040 vs. TAIR10
Match: AT1G79200.1 (AT1G79200.1 unknown protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 4   SERKSKEKRKHR---KAASSSEEEKRSKRPRAAENEERESRSDKREKRKEKKSHKHSKRH 63
           SER SKEK++ R   + +SSS+ E++ KR R  E ++   R  +R  +K+KKSHKH K  
Sbjct: 3   SERSSKEKKRSRARSEDSSSSDYEEKVKRHRGTEKDDE--RRSRRSDKKDKKSHKHHKSS 62

Query: 64  SEKKSKDIH-KGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 123
           + KKSKD   K KH + DH     I ELS EDYFSKNNEFATWLK+EK  YF+DL++E+A
Sbjct: 63  TSKKSKDDKPKKKHTESDHKLKEGIPELSMEDYFSKNNEFATWLKEEKRTYFNDLTTEAA 122

Query: 124 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIK 157
           R LFS F++ WN  KLESRYYEGIS+ PRT+H+W IK
Sbjct: 123 RGLFSRFVKRWNRGKLESRYYEGISTAPRTAHDWMIK 157

[Close]

BLAST of Lsi11G016040 vs. NCBI nr
Match: gi|449444142|ref|XP_004139834.1| (PREDICTED: protein FAM133B [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 1.2e-66
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 1


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESR-SDKREKRKEKKSHKHSKR 60
           MAGSERKSKEKRKHRK+ SSS+++KRSKRPRAAE+EERESR SDKREKRKEKKSHKHSKR
Sbjct: 1   MAGSERKSKEKRKHRKSVSSSDDDKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKR 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS AKIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRAKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of Lsi11G016040 vs. NCBI nr
Match: gi|659092525|ref|XP_008447104.1| (PREDICTED: protein PXR1 isoform X2 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 3.5e-66
Identity = 147/158 (93.04%), Postives = 152/158 (96.20%), Query Frame = 1


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESR-SDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRKHRK+ASSSE+EKRSKRPRAAE+EERESR SDKREKRKEKKSHKHSK 
Sbjct: 1   MGGSERKSKEKRKHRKSASSSEDEKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKS 60

Query: 61  HSEKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESA 120
           HSEKKSKD+HKGKHHKGDHLS  KIQELSKEDYFSKNNEFATWLKD KNVYFSDLSSESA
Sbjct: 61  HSEKKSKDLHKGKHHKGDHLSRTKIQELSKEDYFSKNNEFATWLKDVKNVYFSDLSSESA 120

Query: 121 RELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           RELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 RELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 158

[Close]

BLAST of Lsi11G016040 vs. NCBI nr
Match: gi|659092523|ref|XP_008447103.1| (PREDICTED: protein FAM133A isoform X1 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 132/168 (78.57%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 1   MAGSERKSKEKRKHRKAASSSEEEKRSKRPRAAENEERESR-SDKREKRKEKKSHKHSKR 60
           M GSERKSKEKRKHRK+ASSSE+EKRSKRPRAAE+EERESR SDKREKRKEKKSHKHSK 
Sbjct: 1   MGGSERKSKEKRKHRKSASSSEDEKRSKRPRAAEDEERESRRSDKREKRKEKKSHKHSKS 60

Query: 61  HSEKKSKDIH----------KGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNV 120
           HS  +SK +           +    K       KIQELSKEDYFSKNNEFATWLKD KNV
Sbjct: 61  HSGFQSKVLSCPAFFSQRRSRRIFTKASITRRTKIQELSKEDYFSKNNEFATWLKDVKNV 120

Query: 121 YFSDLSSESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           YFSDLSSESARELFSDF+ELWNDRKLESRYYEGISSGPRTSHNWKIKG
Sbjct: 121 YFSDLSSESARELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIKG 168

[Close]

BLAST of Lsi11G016040 vs. NCBI nr
Match: gi|595875362|ref|XP_007212175.1| (hypothetical protein PRUPE_ppa012587mg [Prunus persica])

HSP 1 Score: 176.4 bits (446), Expect = 3.9e-41
Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 1


Query: 3   GSERKSKEKRKHRKAASSS--EEEKRSKRPRAAENEERESR-SDKREKRKEKK-SHKHSK 62
           GS+RKS+EK+K RK ++SS  E+E++ KR R  E+EER+SR SDK+EK K+KK SHKHSK
Sbjct: 2   GSDRKSEEKKKSRKRSTSSDSEDERKGKRRRPVEDEERKSRRSDKKEKSKDKKRSHKHSK 61

Query: 63  RHS--EKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSS 122
            HS  EKK+KD HK KHHKGD     + QELS +DYFSKNNEF+TWLK+EK+V+FSDLSS
Sbjct: 62  HHSDKEKKTKDKHKSKHHKGDRHLKIEFQELSTDDYFSKNNEFSTWLKEEKDVFFSDLSS 121

Query: 123 ESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           ESAR+LFSDF+++WN +KLES+YYEGI+SGPR +H WKIKG
Sbjct: 122 ESARQLFSDFVKVWNKQKLESKYYEGIASGPRCAHTWKIKG 162

[Close]

BLAST of Lsi11G016040 vs. NCBI nr
Match: gi|645239419|ref|XP_008226116.1| (PREDICTED: protein PXR1 [Prunus mume])

HSP 1 Score: 175.6 bits (444), Expect = 6.6e-41
Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 1


Query: 3   GSERKSKEKRKHRKAASSS--EEEKRSKRPRAAENEERESR-SDKREKRKEKK-SHKHSK 62
           GS+RKS+EK+K RK ++SS  E+E++ KR R  E+EER+SR SDK+EK K+KK SHKHSK
Sbjct: 2   GSDRKSEEKKKSRKRSTSSDSEDERKGKRHRPVEDEERKSRRSDKKEKSKDKKRSHKHSK 61

Query: 63  RHS--EKKSKDIHKGKHHKGDHLSSAKIQELSKEDYFSKNNEFATWLKDEKNVYFSDLSS 122
            HS  EKK+KD HK KHHKGD     + QELS +DYFSKNNEF+TWLK+EK+V+FSDLSS
Sbjct: 62  HHSDKEKKTKDKHKSKHHKGDRHLKIEFQELSTDDYFSKNNEFSTWLKEEKDVFFSDLSS 121

Query: 123 ESARELFSDFIELWNDRKLESRYYEGISSGPRTSHNWKIKG 158
           ESAR+LFSDF+++WN +KLES+YYEGI+SGPR +H WKIKG
Sbjct: 122 ESARQLFSDFVKVWNKQKLESKYYEGIASGPRCAHMWKIKG 162

The following BLAST results are available for this feature:

BLAST of Lsi11G016040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G016040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K434_CUCSA	8.4e-67	93.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238960 PE=4 SV=1	[more]
M5WI24_PRUPE	2.7e-41	67.08	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012587mg PE=4 SV=1	[more]
A0A0D2VFA7_GOSRA	1.6e-38	64.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G142800 PE=4 SV=1	[more]
A0A0B0PHK7_GOSAR	8.2e-38	64.78	Uncharacterized protein OS=Gossypium arboreum GN=F383_29903 PE=4 SV=1	[more]
W9R2W8_9ROSA	1.2e-36	60.63	Uncharacterized protein OS=Morus notabilis GN=L484_016229 PE=4 SV=1	[more]

BLAST of Lsi11G016040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79200.1	1.5e-30	56.05	unknown protein	[more]

BLAST of Lsi11G016040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444142\|ref\|XP_004139834.1\|	1.2e-66	93.04	PREDICTED: protein FAM133B [Cucumis sativus]	[more]
gi\|659092525\|ref\|XP_008447104.1\|	3.5e-66	93.04	PREDICTED: protein PXR1 isoform X2 [Cucumis melo]	[more]
gi\|659092523\|ref\|XP_008447103.1\|	3.2e-51	78.57	PREDICTED: protein FAM133A isoform X1 [Cucumis melo]	[more]
gi\|595875362\|ref\|XP_007212175.1\|	3.9e-41	67.08	hypothetical protein PRUPE_ppa012587mg [Prunus persica]	[more]
gi\|645239419\|ref\|XP_008226116.1\|	6.6e-41	67.08	PREDICTED: protein PXR1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G016040.1	Lsi11G016040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34117	FAMILY NOT NAMED	coord: 3..156 score: 1.2
None	No IPR available	PANTHER	PTHR34117:SF1	SUBFAMILY NOT NAMED	coord: 3..156 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G016040	Csa7G238960	Cucumber (Chinese Long) v2	culsiB499
Lsi11G016040	CSPI07G10900	Wild cucumber (PI 183967)	cpilsiB511
Lsi11G016040	Cucsa.239790	Cucumber (Gy14) v1	cgylsiB392
Lsi11G016040	CmaCh19G011050	Cucurbita maxima (Rimu)	cmalsiB474
Lsi11G016040	CmoCh19G011320	Cucurbita moschata (Rifu)	cmolsiB459
Lsi11G016040	Cla005496	Watermelon (97103) v1	lsiwmB089
Lsi11G016040	MELO3C012609	Melon (DHL92) v3.5.1	lsimeB091
Lsi11G016040	ClCG09G022690	Watermelon (Charleston Gray)	lsiwcgB076
Lsi11G016040	Cla97C09G184250	Watermelon (97103) v2	lsiwmbB109
Lsi11G016040	Bhi05G001727	Wax gourd	lsiwgoB114
Lsi11G016040	Carg15658	Silver-seed gourd	carlsiB484
Lsi11G016040	CsaV3_7G022890	Cucumber (Chinese Long) v3	cuclsiB533

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G016040	Wax gourd	lsiwgoB126
Lsi11G016040	Bottle gourd (USVL1VR-Ls)	lsilsiB023
Lsi11G016040	Cucumber (Gy14) v1	cgylsiB180
Lsi11G016040	Cucurbita maxima (Rimu)	cmalsiB101
Lsi11G016040	Cucurbita maxima (Rimu)	cmalsiB516
Lsi11G016040	Cucurbita moschata (Rifu)	cmolsiB087
Lsi11G016040	Cucurbita moschata (Rifu)	cmolsiB497
Lsi11G016040	Cucurbita pepo (Zucchini)	cpelsiB201
Lsi11G016040	Cucurbita pepo (Zucchini)	cpelsiB234
Lsi11G016040	Cucurbita pepo (Zucchini)	cpelsiB531
Lsi11G016040	Wild cucumber (PI 183967)	cpilsiB429
Lsi11G016040	Cucumber (Chinese Long) v2	culsiB426
Lsi11G016040	Melon (DHL92) v3.5.1	lsimeB085
Lsi11G016040	Watermelon (Charleston Gray)	lsiwcgB099
Lsi11G016040	Watermelon (97103) v1	lsiwmB108
Lsi11G016040	Cucumber (Gy14) v2	cgyblsiB390
Lsi11G016040	Cucumber (Gy14) v2	cgyblsiB468
Lsi11G016040	Melon (DHL92) v3.6.1	lsimedB092
Lsi11G016040	Melon (DHL92) v3.6.1	lsimedB097
Lsi11G016040	Silver-seed gourd	carlsiB306
Lsi11G016040	Silver-seed gourd	carlsiB352
Lsi11G016040	Cucumber (Chinese Long) v3	cuclsiB452
Lsi11G016040	Watermelon (97103) v2	lsiwmbB088