Lsi11G015800 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G015800
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionZinc finger CCCH domain-containing protein 44
Locationchr11 : 24135238 .. 24140437 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGAAAATTAGGTCCAAGAGATATGAATTCGTCGGTTGGGGATCAAGACCACTTATTGAATTTCTTGAATCAATTGGTAAGGATATCAAGGAGAAGATTTCTCGACACGACGTTACCTCCATTATAAATGAATATGTCAATATTAACAATCTTCTTCATCCCTCTAGAAAGAAACGAATCCTTTGCGATGATAGGCTCCATTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAACCACACTTTGCCGAGAATCAAGATGAATCAGATGATGACTTTTCTTACAGCTCTGACGAGACTGAAAATCTTTTCAATACCCTCAAACGGGAGAATGGTATAATCCCAGGAAGAAAGCTCAGTCAGAAGACGAGAGTGGTTGTGAACCCAAACAGCTCTTTTGCTGCCGTGGTTCCTGGAAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGCTTAAGGATCATGAAACCTTTGAGGGCAAGTTGATTGGTAGTTTTGTCAGGATTAAATCTGATCCCCATGACTATCTTCAGAAAAATACTCATCAGCTCGTGCAAGTTATAGGTAACTAAACTATCTCTTTTTATTCATGAACAGGGAAAACGCTACCTGAAATAATTTATCTCTACAGATAAACTTTGATGTAATCTGAGTTGTCTTCGTTTTATTTACATCCTTCATGGAAATAACTGCAAATTATCGTCATGAAAAAAATTGAAAGAATGTTACTAAAGTTAAATAGGTCCTACTGTGAATGCTTCTAAAAGTTAGCTTGGTCAGTTGTTATGGTGGAAAAAGAACAGAAGAAAGTAAAGAGAACTCGAAAATTTGAAATGAGGTGTCCTAGCAGATGGTATACTTCAAATTGGTAAATTTGATTACAGATACTTTGAAGACAGCTCATTAGTTCAACAGATTAATTATAATTAGTTTTCTCTTAGTTGTCTTAGTGTCCTCATGGTGTCCTCTTTCTATGCTATATGTTAATTTCTCTATCGTAGTTGTCTTAGTGAGAGTCAGAGAGATCAGAGATGTTATGCATCTGTTATTCAAACGGTAGTTCTATATATGACCTTGTATCAGTACTTTACAGATGGTGAATATTATTCTGATATTTCTCTCGTACACAGTCTCTCTCTCTCTATTACACTTCTTATTTGAATGCACATTTTTCCCCTCTAGTTTCCATCGTTGTCATAATGTCCCAGAGTCAATTTTCAAGTTTAAATCTTGCTTGGTATAGTAAATATACCATTGGAGAAGTTCAATTAATGAAACGACAATGAGCCTCTTGGCTCTTGAAGCCATCTTTGAAGGTGTTGTATTGCTTAAGTTTCTTCTTTTTCTTCTTTCAAGGTTCCTCCACCATGCCTTTTGTTTCGTCTATCTCTACAAATTGTTATATGCTTACCGTCCAACCATATGTCATCTCAGATAATCAATTCAATGATCTTATTTTTTGATATCCTTCAGGGGTGAAGAAAATTTCTATATCTGGCGATTTGGGTACAGGATTCCTTCTTCATGTTTCCAATGTGGTGAAAGACGTCAGCATCTGCATGCTTTCAGATGAAAATTTTTCTGAGGTAATTTCACCCTTGTTATTATTATTATAGATCAATATACTTTTTTCCCCTCTAGGCAACATTTTTCTTTTTCGTTTTTGTAACAACAACAATATGAAAAAATACAAGGGCATACAAAAAATCAATCCCACAAAAATCCGACTAAAGGAAGGGGGTCCAACTAAGAACAATGTTTCCTAGAATCTCAAAGAGAAACATGAAATCTCACCAAGGATCGAACTTCACTAGGGTCTTGTTCAAGACCTCTAAACACTTTGTTGTTCCTCTCCCCCAAAGATCTCATAATAAAGCACACACCCTAATAAACTACAAAAACAACCTTTCTCTTTGAAAGGCAGATGGAGGAGGAATTCTCAGATCGTTGCACATATATCCTTTTGATGAGCTAACACAAGATCAAACATCTCAAAGAAGCAATCCCAAAAAAACTTCGCAAATTGACAGCTACAGAGAATGTGATCCCCAAAAAGTTCAACTCAAGGCTTGTTGTCGGTTGAAGAAACTTCTGGAGATGTGCAACTTTTAATGACTTCCATCGCGGCCTAGCTAGAGTGGATCAAACTGAAATTGGGGCAACCACAGTTGAGAGATCATTAATCAAGTCCATCCACCAAGATAAGATCAATGAACGGCGATAAATCAAGAATTCGATTCTTTGAGTAAAGAAGAAGATTTTCTACACCACCGATTATACCAGCTTTAGGAAACCAAGTGTTCTGCAGGCATCCGAATTGGAACACAAATGACTGATATGAAGATTGATTTGGCGAGCTTTAGTGGGAATTTGTCATGTAAGGGCTTTTTAGGGATTCTTTCCTTGTTTTGTTTGTTTTAATCAACAAATACAAGCCCATGGGAGAAGGTTGTTCATTTGGCATACGGCTGGCAAAGTTAATTTAAGCCTCCGAAGTTCTTGGATAAGTATTTCAAGAACTTGGATGAAGGTGGGGTCCTTGGCTGTTTACAAGGTGGGAAGAGGAAGTCGAGTAGCTTTTTGGTTTGATCCTTGGGTTGACAAAACTGCATTGCAAACATTTTTCCTGAGGCTTTTTAGAATTTCTCTAAAGCCCCATGGTTCGGTCTCGGATCATTGGGATTCAAACCATTCCTCTTGGGCCATATTTTTTAGAAGATTTTTAAAAGAAGAAGAAATAGTTGATTTTCAAATGCTCCTAGATACTTTAGCAAGGAAGAAGGTTACTGACCACCCTGATAAACGAGTTTGGTCCAATGAAGACAATGGAAATTATTCGGTGAAGTCTCTAGTCACTCATCTTTCAAGAGCTTATCCTTTAGAAACAAACTTGAAGAAAGCGCTTTGGAGTTCCAATAGTCCTCAACGGGTTAATATCACAATTTGAATTATGTTAAATGGACATTTGAATCTGTGCCTCGGTTCTACAAAGGAAACTGCCATTGCATTGCCTCTCGCCCAACATTTGCTCCCTCTGTTTGGCTGGATTTGAAGACTTACAGCACCTGTTTTTTTAATGTGTTTTTGCTAAAAACTGCTGGCATAGTTTATTCTCTTTTTTCAATTTATGTTGGGTGTTTGGGACTTCTTTTAGGGATAATATTTTGCCGCTTTTGGTGAGACCCAAGCTCAAGTCAGCCCCTAAAATATTGTGGAATAATGTGGTCAAAGCATTGCTAGTGGAATTATGGTTCCCCAACCGTTTTGAGATTGCTAGGTTAAATGCCTCTTCCTAGAGCACTCTTACCGAAGAATATGTTGATTACTCCATCCAAGACTTGAGCCTAAACTGGAAAGCATTTATATTTTCAGCACCTTAGAGATTAGATAGTTCTTAAAGGATTTTGTGTATTTTTTTCCAGATTCATGACTTTTAGTTCTTTTGTCTTTGCCCCATGTATTCGGGTTTCTCCTTTCTTCGGATTGAACTAATATTGGTTATTTATTTTGTTTGCAATTAGTTTGGATATGGTGAGAGTGCTAAGGAAGTGTCAACCTCGTTGAGATGTCCGGGTGCATTCCCTGATCCTTAGGATATTTTGATATAGTTTCCTATTATGTATATTGGGCTTTTGTCTCAATTCATTATATCAATGAAAGAGACTCGTTTCTTTTAAAAAAAAATCAACAAATACAAGCCCTTCCAGTTGCTGGTTGGCTATACTAGGCTTGTAGATGATAATTCAATTCATTCAATAATATTTTGAGGTTTATTCAAGAACTCTCCAAGAAAGTAGCCTCATCAATTTGGATGTTGAAGATCTGCTCGATTGGATCAAGAATGTGAGGAGTGAATATCTGCTTATCAAATAACTATGAATGTATCCTTAAAAGTCAAAGGGGGAGTATTTGCTTGGTGGGACCAACTCCAAAGGCGAGCTTGCAGGAAGAGAACTGACAAGACCAGGCCAAGAATGTTGAAGCTCTTAAAAGGAAACTTCTTATCAAATAACTATGAACATATCCTTTTCAATCAATACCATCACTGCAAACAAGGGTAAAGAACAGTGGGAGATCATACTGAAGAATTCAACTGCCTAGGCGAGCAGCTCAACCTTGCTGAAGGAGGACAACTCCAAATAACTCGATTTACCTTTGGACTAAGGCAAGATATCCAAGAAAAGGTGGAAGGCCAGCCTTTAATACGATTAACAGAGGCAGTATCATGGAGGGGAAAAAAAAAGCAATTGGATAAGGGGAAAAACTGCCCGAAAGGAAAATCATGGGAGGCATTTCACCCATCTCAGACATTTTCCTTGCTTTCTATCCCTCTCTCTTATATTTTTTAATCAAGTTTTCTCTTTTCTTAAGTCTACTTTTTGTAGGGGTTTTTATATATCTTTTATGCCTGCCTGATTATTAATAAATTATTGTTTCCTTTTCAAAAAAAAGTTGTTGCCACTCGGTGTTAATTCTAGATTTTCTTTATTGAACAAGGGAAAGTATCACTGTCTATCTACCATTTTATTAAATTCTCGCCACCCACATTGTCACTAAGAAAATGTTTTTCAACTTATTTATTTTTTTTGAAACGGAAACAACACCTTTTATTGATGAAATGAAAAGAGACTAATACTCAAAATACATTATAGTAAAGCTATATAGGAAATATAAATCCAATAAGACTAGGGATTAGTAAGCGCACCCAGATATCTCAACTAGGTTGATATACCCATAGTGCCCTCATCACATCCCAAAAGAGAGAAATCTACTAAAATTGTATTAACAAGATGACATAATTCTCAACAATACAAGAATAAGATCAAATTAGACCAAAACAACGATGTGCCAATCGAAAACAATTAAGAGGAAATAAACGCATTCCAATTTAAGCTAATGTCATTGTTAGAGCCTTTTTTCTCCCACAAGCCAAAATTTACTGTTTATATTGAATTAAATTTTTTTGCGTATGCATCTACTTTGATGCTTGTATTTGTTGGATAGGAGTTATCTTATTATGATTATTACTGGAAGTTTTATTGCCATTGCTATGTTGCAGGAGGAATGCAAAGATCTGGATCTGAGAATAAAAAATGGCTTGGTCAAGAGATTAACTATTGTAAGTTTTTCTTTTGTCGCTCAGATGGTCCTCTTGTTTTATCTTAA

mRNA sequence

ATGAAAAGGAAAATTAGGTCCAAGAGATATGAATTCGTCGGTTGGGGATCAAGACCACTTATTGAATTTCTTGAATCAATTGGTAAGGATATCAAGGAGAAGATTTCTCGACACGACGTTACCTCCATTATAAATGAATATGTCAATATTAACAATCTTCTTCATCCCTCTAGAAAGAAACGAATCCTTTGCGATGATAGGCTCCATTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAACCACACTTTGCCGAGAATCAAGATGAATCAGATGATGACTTTTCTTACAGCTCTGACGAGACTGAAAATCTTTTCAATACCCTCAAACGGGAGAATGGTATAATCCCAGGAAGAAAGCTCAGTCAGAAGACGAGAGTGGTTGTGAACCCAAACAGCTCTTTTGCTGCCGTGGTTCCTGGAAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGCTTAAGGATCATGAAACCTTTGAGGGCAAGTTGATTGGTAGTTTTGTCAGGATTAAATCTGATCCCCATGACTATCTTCAGAAAAATACTCATCAGCTCGTGCAAGTTATAGGGGTGAAGAAAATTTCTATATCTGGCGATTTGGGTACAGGATTCCTTCTTCATGTTTCCAATGTGGTGAAAGACGTCAGCATCTGCATGCTTTCAGATGAAAATTTTTCTGAGGAGTTATCTTATTATGATTATTACTGGAAGTTTTATTGCCATTGCTATGTTGCAGGAGGAATGCAAAGATCTGGATCTGAGAATAAAAAATGGCTTGGTCAAGAGATTAACTATTGTAAGTTTTTCTTTTGTCGCTCAGATGGTCCTCTTGTTTTATCTTAA

Coding sequence (CDS)

ATGAAAAGGAAAATTAGGTCCAAGAGATATGAATTCGTCGGTTGGGGATCAAGACCACTTATTGAATTTCTTGAATCAATTGGTAAGGATATCAAGGAGAAGATTTCTCGACACGACGTTACCTCCATTATAAATGAATATGTCAATATTAACAATCTTCTTCATCCCTCTAGAAAGAAACGAATCCTTTGCGATGATAGGCTCCATTCCATTTTCGGAAGGAAAACAATTGGCCGTATTAAAATCCATGACATGCTAGAACCACACTTTGCCGAGAATCAAGATGAATCAGATGATGACTTTTCTTACAGCTCTGACGAGACTGAAAATCTTTTCAATACCCTCAAACGGGAGAATGGTATAATCCCAGGAAGAAAGCTCAGTCAGAAGACGAGAGTGGTTGTGAACCCAAACAGCTCTTTTGCTGCCGTGGTTCCTGGAAATATTAATCTTGTCTACTTGAGAAAGAGTTTAGTAGAGGATCTGCTTAAGGATCATGAAACCTTTGAGGGCAAGTTGATTGGTAGTTTTGTCAGGATTAAATCTGATCCCCATGACTATCTTCAGAAAAATACTCATCAGCTCGTGCAAGTTATAGGGGTGAAGAAAATTTCTATATCTGGCGATTTGGGTACAGGATTCCTTCTTCATGTTTCCAATGTGGTGAAAGACGTCAGCATCTGCATGCTTTCAGATGAAAATTTTTCTGAGGAGTTATCTTATTATGATTATTACTGGAAGTTTTATTGCCATTGCTATGTTGCAGGAGGAATGCAAAGATCTGGATCTGAGAATAAAAAATGGCTTGGTCAAGAGATTAACTATTGTAAGTTTTTCTTTTGTCGCTCAGATGGTCCTCTTGTTTTATCTTAA

Protein sequence

MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENGIIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEELSYYDYYWKFYCHCYVAGGMQRSGSENKKWLGQEINYCKFFFCRSDGPLVLS
Homology
[Close]
BLAST of Lsi11G015800 vs. Swiss-Prot
Match: Y5843_ARATH (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 247.7 bits (631), Expect = 1.6e-64
Identity = 132/238 (55.46%), Postives = 174/238 (73.11%), Query Frame = 1 

Query: 2   KRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKR 61
           KRK R KR+EFVGWGSR LIEFL S+GKD  E ISR+DV+  I +Y++   LL PS KK+
Sbjct: 19  KRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKK 78

Query: 62  ILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENGI 121
           ++CD RL  +FG +TI R+K++D+LE H+ ENQD+SD DF Y  DE + + ++       
Sbjct: 79  VVCDKRLVLLFGTRTIFRMKVYDLLEKHYKENQDDSDFDFLY-EDEPQIICHS------- 138

Query: 122 IPGRKLSQKT-RVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 181
               K++++T +VV  P  +FAA+V  NI L+YLRKSLV++LLK  +TFEGK++GSFVRI
Sbjct: 139 ---EKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVRI 198

Query: 182 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDP+DYLQK  +QLVQV GVKK   + D    FLL V+N VKDVSI +LSD+NFS+E
Sbjct: 199 KSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSISVLSDDNFSQE 241

[Close]
BLAST of Lsi11G015800 vs. Swiss-Prot
Match: C3H19_ARATH (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE=1 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 7.2e-25
Identity = 72/242 (29.75%), Postives = 130/242 (53.72%), Query Frame = 1 

Query: 11   EFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKRILCDDRLHS 70
            E + W S+ L++ +  + +  +  +   +V +++  Y+   NL  P RK +++CD RL +
Sbjct: 803  ETMEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQN 862

Query: 71   IFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENGIIPGRKLSQK 130
            +FG+  +G  ++ ++L+ HF + +    DD      +TE   +    EN   P +    K
Sbjct: 863  LFGKSHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDK 922

Query: 131  TRVVVNPN---------SSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRIK 190
             R     N           FAAV   NINL+YLR+SLVEDLL+D   FE K+  +FVR++
Sbjct: 923  KRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLR 982

Query: 191  SDPHDYLQKNTHQLVQVIGVKKISISGDLG---TGFLLHVSNVVKD--VSICMLSDENFS 239
               +   +++ ++LVQV+G  K      +G   T ++L + N+ K   +SI ++S+++F+
Sbjct: 983  ISGNQ--KQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFT 1042

[Close]
BLAST of Lsi11G015800 vs. Swiss-Prot
Match: C3H44_ARATH (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 106.3 bits (264), Expect = 5.7e-22
Identity = 72/239 (30.13%), Postives = 125/239 (52.30%), Query Frame = 1 

Query: 15  WGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKRILCDDRLHSIFGR 74
           W ++ L+EF+  +       +S+ DV  ++ +Y+   NL  P +K ++LCD  L  +FG+
Sbjct: 319 WATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGK 378

Query: 75  KTIGRIKIHDMLEPHF--------AENQDESDDDFSYSSDETENLFNTLKRENGIIPGRK 134
           + +G  ++  +LE H         A+  +        S  E +++ + + R+      RK
Sbjct: 379 QRVGHFEMLKLLESHVLIQEKPKGAKTTNGETTHAVPSQIEEDSVHDPMVRDR----RRK 438

Query: 135 LSQKT--RVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRIKSDP 194
           + +KT  RV      ++AA+   NINL+YLR+  +E LL D    + K++G+ +RIK   
Sbjct: 439 MRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSG 498

Query: 195 HDYLQKNTHQLVQVIGVKKISISGDLG---TGFLLHVSNVVKD--VSICMLSDENFSEE 239
            D  + + H+LVQV+G  K   S  LG   T  +L + N+ K   +SI  LSD+N +E+
Sbjct: 499 SDQ-KLDIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSDQNITED 552

[Close]
BLAST of Lsi11G015800 vs. TrEMBL
Match: A0A0A0K3N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G252670 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 6.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           MKRKIRSKRYEFVGWGSRPLIEFLES+GKDIKEKISRHDVTSIINEYVNINNLLHPS+KK
Sbjct: 20  MKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVTSIINEYVNINNLLHPSKKK 79

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQ ESDDDFSYSSDETENLF+ LKR+NG
Sbjct: 80  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQHESDDDFSYSSDETENLFSVLKRDNG 139

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           I PGRKLSQKTRV VNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFE KLIGSFVRI
Sbjct: 140 ITPGRKLSQKTRVHVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFESKLIGSFVRI 199

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDPHDYLQKNTHQLVQVIG+KKISISGDLG GFLLHVSNV+KDVSI MLSDENFSEE
Sbjct: 200 KSDPHDYLQKNTHQLVQVIGLKKISISGDLGPGFLLHVSNVMKDVSISMLSDENFSEE 257

[Close]
BLAST of Lsi11G015800 vs. TrEMBL
Match: A0A061DK51_THECC (Binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_001638 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 9.7e-77
Identity = 146/238 (61.34%), Postives = 187/238 (78.57%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           +KRK+RS++ EFVGWGS+PLIEFLESIGKD  ++IS+HDVT II +YVN NNL+HP++KK
Sbjct: 24  LKRKVRSRKLEFVGWGSKPLIEFLESIGKDTTKQISQHDVTDIIRKYVNDNNLVHPAKKK 83

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCD+RL+SIFGRK IGR+K++D+LE H+AENQD   D FS  SDE +      + +  
Sbjct: 84  RILCDERLYSIFGRKAIGRMKVYDLLETHYAENQDAWSDGFSSMSDEDD----VGEEQKS 143

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           +I  RK  QK +V+  P S FAA+V  NI LVYL+KSLV+DLLKD E FE K++GSFVRI
Sbjct: 144 VISERKAYQKKKVIETPKSCFAAIVQDNIKLVYLKKSLVQDLLKDPERFEAKVVGSFVRI 203

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDP+ YLQ+N+HQLV V G+KK S + D+ T  LL VSN VKDV++ MLSD+NF++E
Sbjct: 204 KSDPNYYLQQNSHQLVLVKGLKKASGNNDINTDILLQVSNFVKDVNLSMLSDDNFAQE 257

[Close]
BLAST of Lsi11G015800 vs. TrEMBL
Match: A0A061DJC6_THECC (Binding protein, putative isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_001638 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 9.7e-77
Identity = 146/238 (61.34%), Postives = 187/238 (78.57%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           +KRK+RS++ EFVGWGS+PLIEFLESIGKD  ++IS+HDVT II +YVN NNL+HP++KK
Sbjct: 24  LKRKVRSRKLEFVGWGSKPLIEFLESIGKDTTKQISQHDVTDIIRKYVNDNNLVHPAKKK 83

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCD+RL+SIFGRK IGR+K++D+LE H+AENQD   D FS  SDE +      + +  
Sbjct: 84  RILCDERLYSIFGRKAIGRMKVYDLLETHYAENQDAWSDGFSSMSDEDD----VGEEQKS 143

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           +I  RK  QK +V+  P S FAA+V  NI LVYL+KSLV+DLLKD E FE K++GSFVRI
Sbjct: 144 VISERKAYQKKKVIETPKSCFAAIVQDNIKLVYLKKSLVQDLLKDPERFEAKVVGSFVRI 203

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDP+ YLQ+N+HQLV V G+KK S + D+ T  LL VSN VKDV++ MLSD+NF++E
Sbjct: 204 KSDPNYYLQQNSHQLVLVKGLKKASGNNDINTDILLQVSNFVKDVNLSMLSDDNFAQE 257

[Close]
BLAST of Lsi11G015800 vs. TrEMBL
Match: A0A067DW11_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019902mg PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 7.7e-74
Identity = 143/238 (60.08%), Postives = 188/238 (78.99%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           +KR+ RSK+ +F GWGS PLIEFL+S+GKD  ++ISR+DVT IIN+YVN N L+H  +KK
Sbjct: 27  LKRRGRSKKVKFDGWGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKK 86

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           R++ D+RL S+FG+K+  RIKI+D+LE H+AENQ ESDDDF +SSDE  NLF++ K+++ 
Sbjct: 87  RVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQFESDDDFLFSSDEENNLFSSEKQKSR 146

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
            +P +KL  +T     P S +AA+VP NI LVYL++SLV+DLLKD ETFE K++GSFVR+
Sbjct: 147 KVPLKKLCLET-----PKSCWAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRV 206

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDP+DYLQKN+HQL+QVIG KK+  + D  T  LL VSN VKD+ I  LSD+NFSEE
Sbjct: 207 KSDPNDYLQKNSHQLLQVIGTKKVPGTDDKSTEILLKVSNFVKDIRIATLSDDNFSEE 259

[Close]
BLAST of Lsi11G015800 vs. TrEMBL
Match: A0A067DJP7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019902mg PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 7.7e-74
Identity = 143/238 (60.08%), Postives = 188/238 (78.99%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           +KR+ RSK+ +F GWGS PLIEFL+S+GKD  ++ISR+DVT IIN+YVN N L+H  +KK
Sbjct: 27  LKRRGRSKKVKFDGWGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKK 86

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           R++ D+RL S+FG+K+  RIKI+D+LE H+AENQ ESDDDF +SSDE  NLF++ K+++ 
Sbjct: 87  RVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQFESDDDFLFSSDEENNLFSSEKQKSR 146

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
            +P +KL  +T     P S +AA+VP NI LVYL++SLV+DLLKD ETFE K++GSFVR+
Sbjct: 147 KVPLKKLCLET-----PKSCWAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRV 206

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDP+DYLQKN+HQL+QVIG KK+  + D  T  LL VSN VKD+ I  LSD+NFSEE
Sbjct: 207 KSDPNDYLQKNSHQLLQVIGTKKVPGTDDKSTEILLKVSNFVKDIRIATLSDDNFSEE 259

[Close]
BLAST of Lsi11G015800 vs. TAIR10
Match: AT5G08430.1 (AT5G08430.1 SWIB/MDM2 domain;Plus-3;GYF)

HSP 1 Score: 247.7 bits (631), Expect = 9.0e-66
Identity = 132/238 (55.46%), Postives = 174/238 (73.11%), Query Frame = 1 

Query: 2   KRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKR 61
           KRK R KR+EFVGWGSR LIEFL S+GKD  E ISR+DV+  I +Y++   LL PS KK+
Sbjct: 19  KRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKK 78

Query: 62  ILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENGI 121
           ++CD RL  +FG +TI R+K++D+LE H+ ENQD+SD DF Y  DE + + ++       
Sbjct: 79  VVCDKRLVLLFGTRTIFRMKVYDLLEKHYKENQDDSDFDFLY-EDEPQIICHS------- 138

Query: 122 IPGRKLSQKT-RVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 181
               K++++T +VV  P  +FAA+V  NI L+YLRKSLV++LLK  +TFEGK++GSFVRI
Sbjct: 139 ---EKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEGKMLGSFVRI 198

Query: 182 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDP+DYLQK  +QLVQV GVKK   + D    FLL V+N VKDVSI +LSD+NFS+E
Sbjct: 199 KSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSISVLSDDNFSQE 241

[Close]
BLAST of Lsi11G015800 vs. TAIR10
Match: AT5G63700.1 (AT5G63700.1 zinc ion binding;DNA binding)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 89/248 (35.89%), Postives = 146/248 (58.87%), Query Frame = 1 

Query: 2   KRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKR 61
           K+  ++KR EF+ WGS+PLI+FL SIG+D +E +S+H V S+I  Y+   NLL   +KK+
Sbjct: 249 KKVGKNKRMEFIRWGSKPLIDFLTSIGEDTREAMSQHSVESVIRRYIREKNLLDREKKKK 308

Query: 62  ILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDE-----------SDDDFSYSSDETEN 121
           + CD++L+SIF +K+I + +I+ +L  H  EN D+            + +    S++ + 
Sbjct: 309 VHCDEKLYSIFRKKSINQKRIYTLLNTHLKENLDQVEYFTPLELGFIEKNEKRFSEKNDK 368

Query: 122 LFNTLKRENGIIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFE 181
           +    K++       ++ +K        + FA +   N+ LVYLRKSLV +LLK +++F 
Sbjct: 369 VMMPCKKQKTESSDDEICEKEVQPEMRATGFATINADNLKLVYLRKSLVLELLKQNDSFV 428

Query: 182 GKLIGSFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICML 239
            K++GSFV++K+ P D++    +Q++QV G+K    + D   G LLHVS +   VSI  L
Sbjct: 429 DKVVGSFVKVKNGPRDFM---AYQILQVTGIKN---ADDQSEGVLLHVSGMASGVSISKL 488

[Close]
BLAST of Lsi11G015800 vs. TAIR10
Match: AT5G23480.1 (AT5G23480.1 SWIB/MDM2 domain;Plus-3;GYF)

HSP 1 Score: 162.9 bits (411), Expect = 2.9e-40
Identity = 103/246 (41.87%), Postives = 142/246 (57.72%), Query Frame = 1 

Query: 2   KRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINN----LLHPS 61
           KR  + K  EFVGWGSR LIEFLES+G+D   KIS +DVT+II  Y+   +    L    
Sbjct: 14  KRLRKPKSLEFVGWGSRNLIEFLESLGRDTTNKISENDVTAIIMNYIREKSRETPLKSKK 73

Query: 62  RKKRILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDES--DDDFSYSSDETENLFNTL 121
           R+K + CD++L  +FG   I  IK+ D++E H+ ENQ+E    DD   S D+        
Sbjct: 74  RRKTVACDEKLRLLFGAGKINVIKVPDLVEKHYVENQEEDLFYDDLYASEDD-------- 133

Query: 122 KRENGIIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIG 181
           K++   +  +   Q  +VV  P  +FAA+V   + L+YLRKSLV++L K  ETFE K++ 
Sbjct: 134 KQQRLSLSDKVAKQTKQVVSKPRGTFAAIVRDTVKLLYLRKSLVQELAKTPETFESKVVR 193

Query: 182 SFVRIKSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSN---VVKDVSICMLSD 239
           +FVRI         KN  QLV V GVK+    GD   G L  V+N    +KDV+   LSD
Sbjct: 194 TFVRI---------KNPCQLVHVTGVKE----GDPIDGNLFQVTNYSYYLKDVTTSSLSD 238

[Close]
BLAST of Lsi11G015800 vs. TAIR10
Match: AT2G16485.1 (AT2G16485.1 nucleic acid binding;zinc ion binding;DNA binding)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-26
Identity = 72/242 (29.75%), Postives = 130/242 (53.72%), Query Frame = 1 

Query: 11   EFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKRILCDDRLHS 70
            E + W S+ L++ +  + +  +  +   +V +++  Y+   NL  P RK +++CD RL +
Sbjct: 803  ETMEWASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQN 862

Query: 71   IFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENGIIPGRKLSQK 130
            +FG+  +G  ++ ++L+ HF + +    DD      +TE   +    EN   P +    K
Sbjct: 863  LFGKSHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDK 922

Query: 131  TRVVVNPN---------SSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRIK 190
             R     N           FAAV   NINL+YLR+SLVEDLL+D   FE K+  +FVR++
Sbjct: 923  KRKTRKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLR 982

Query: 191  SDPHDYLQKNTHQLVQVIGVKKISISGDLG---TGFLLHVSNVVKD--VSICMLSDENFS 239
               +   +++ ++LVQV+G  K      +G   T ++L + N+ K   +SI ++S+++F+
Sbjct: 983  ISGNQ--KQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFT 1042

[Close]
BLAST of Lsi11G015800 vs. TAIR10
Match: AT3G51120.1 (AT3G51120.1 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-23
Identity = 72/239 (30.13%), Postives = 125/239 (52.30%), Query Frame = 1 

Query: 15  WGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKKRILCDDRLHSIFGR 74
           W ++ L+EF+  +       +S+ DV  ++ +Y+   NL  P +K ++LCD  L  +FG+
Sbjct: 319 WATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGK 378

Query: 75  KTIGRIKIHDMLEPHF--------AENQDESDDDFSYSSDETENLFNTLKRENGIIPGRK 134
           + +G  ++  +LE H         A+  +        S  E +++ + + R+      RK
Sbjct: 379 QRVGHFEMLKLLESHVLIQEKPKGAKTTNGETTHAVPSQIEEDSVHDPMVRDR----RRK 438

Query: 135 LSQKT--RVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRIKSDP 194
           + +KT  RV      ++AA+   NINL+YLR+  +E LL D    + K++G+ +RIK   
Sbjct: 439 MRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSG 498

Query: 195 HDYLQKNTHQLVQVIGVKKISISGDLG---TGFLLHVSNVVKD--VSICMLSDENFSEE 239
            D  + + H+LVQV+G  K   S  LG   T  +L + N+ K   +SI  LSD+N +E+
Sbjct: 499 SDQ-KLDIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSDQNITED 552

[Close]
BLAST of Lsi11G015800 vs. NCBI nr
Match: gi|659092443|ref|XP_008447064.1| (PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 5.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           MKRKIRSKRYEFVGWGSRPLIEFLES+GKDIKEKISRHDVTSIINEYVNINNLLHPS+KK
Sbjct: 20  MKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVTSIINEYVNINNLLHPSKKK 79

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLF+ LKR+NG
Sbjct: 80  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFSVLKRDNG 139

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           I PGRKLS KTRV VNPNSSFAAVVPGNINL+YLRKSLVEDLLKDHETFE KLIGSFVRI
Sbjct: 140 ITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVEDLLKDHETFESKLIGSFVRI 199

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDPHDYLQKNTHQLVQVIGVKKISISGDLG GFLLHVSNV+KDVSI MLSDENFSEE
Sbjct: 200 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNVMKDVSISMLSDENFSEE 257

[Close]
BLAST of Lsi11G015800 vs. NCBI nr
Match: gi|659092447|ref|XP_008447066.1| (PREDICTED: uncharacterized protein At5g08430 isoform X4 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 5.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           MKRKIRSKRYEFVGWGSRPLIEFLES+GKDIKEKISRHDVTSIINEYVNINNLLHPS+KK
Sbjct: 20  MKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVTSIINEYVNINNLLHPSKKK 79

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLF+ LKR+NG
Sbjct: 80  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFSVLKRDNG 139

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           I PGRKLS KTRV VNPNSSFAAVVPGNINL+YLRKSLVEDLLKDHETFE KLIGSFVRI
Sbjct: 140 ITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVEDLLKDHETFESKLIGSFVRI 199

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDPHDYLQKNTHQLVQVIGVKKISISGDLG GFLLHVSNV+KDVSI MLSDENFSEE
Sbjct: 200 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNVMKDVSISMLSDENFSEE 257

[Close]
BLAST of Lsi11G015800 vs. NCBI nr
Match: gi|659092441|ref|XP_008447063.1| (PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 5.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           MKRKIRSKRYEFVGWGSRPLIEFLES+GKDIKEKISRHDVTSIINEYVNINNLLHPS+KK
Sbjct: 20  MKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVTSIINEYVNINNLLHPSKKK 79

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLF+ LKR+NG
Sbjct: 80  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFSVLKRDNG 139

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           I PGRKLS KTRV VNPNSSFAAVVPGNINL+YLRKSLVEDLLKDHETFE KLIGSFVRI
Sbjct: 140 ITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVEDLLKDHETFESKLIGSFVRI 199

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDPHDYLQKNTHQLVQVIGVKKISISGDLG GFLLHVSNV+KDVSI MLSDENFSEE
Sbjct: 200 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNVMKDVSISMLSDENFSEE 257

[Close]
BLAST of Lsi11G015800 vs. NCBI nr
Match: gi|659092445|ref|XP_008447065.1| (PREDICTED: uncharacterized protein At5g08430 isoform X3 [Cucumis melo])

HSP 1 Score: 452.2 bits (1162), Expect = 6.8e-124
Identity = 234/281 (83.27%), Postives = 246/281 (87.54%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           MKRKIRSKRYEFVGWGSRPLIEFLES+GKDIKEKISRHDVTSIINEYVNINNLLHPS+KK
Sbjct: 20  MKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVTSIINEYVNINNLLHPSKKK 79

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLF+ LKR+NG
Sbjct: 80  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFSVLKRDNG 139

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           I PGRKLS KTRV VNPNSSFAAVVPGNINL+YLRKSLVEDLLKDHETFE KLIGSFVRI
Sbjct: 140 ITPGRKLSLKTRVFVNPNSSFAAVVPGNINLLYLRKSLVEDLLKDHETFESKLIGSFVRI 199

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSE--- 240
           KSDPHDYLQKNTHQLVQVIGVKKISISGDLG GFLLHVSNV+KDVSI MLSDENFSE   
Sbjct: 200 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGPGFLLHVSNVMKDVSISMLSDENFSEAEV 259

Query: 241 ----ELSYYDYYWKFYCHCYVAGGMQRSGSENKKWLGQEIN 275
               E+ + D       HCYV          + +WL +EI+
Sbjct: 260 QRKVEVLHVD----ITKHCYV----------SFQWLSREIS 286

[Close]
BLAST of Lsi11G015800 vs. NCBI nr
Match: gi|449461126|ref|XP_004148294.1| (PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 8.9e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1 

Query: 1   MKRKIRSKRYEFVGWGSRPLIEFLESIGKDIKEKISRHDVTSIINEYVNINNLLHPSRKK 60
           MKRKIRSKRYEFVGWGSRPLIEFLES+GKDIKEKISRHDVTSIINEYVNINNLLHPS+KK
Sbjct: 20  MKRKIRSKRYEFVGWGSRPLIEFLESVGKDIKEKISRHDVTSIINEYVNINNLLHPSKKK 79

Query: 61  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQDESDDDFSYSSDETENLFNTLKRENG 120
           RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQ ESDDDFSYSSDETENLF+ LKR+NG
Sbjct: 80  RILCDDRLHSIFGRKTIGRIKIHDMLEPHFAENQHESDDDFSYSSDETENLFSVLKRDNG 139

Query: 121 IIPGRKLSQKTRVVVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFEGKLIGSFVRI 180
           I PGRKLSQKTRV VNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFE KLIGSFVRI
Sbjct: 140 ITPGRKLSQKTRVHVNPNSSFAAVVPGNINLVYLRKSLVEDLLKDHETFESKLIGSFVRI 199

Query: 181 KSDPHDYLQKNTHQLVQVIGVKKISISGDLGTGFLLHVSNVVKDVSICMLSDENFSEE 239
           KSDPHDYLQKNTHQLVQVIG+KKISISGDLG GFLLHVSNV+KDVSI MLSDENFSEE
Sbjct: 200 KSDPHDYLQKNTHQLVQVIGLKKISISGDLGPGFLLHVSNVMKDVSISMLSDENFSEE 257

The following BLAST results are available for this feature:
BLAST of Lsi11G015800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5843_ARATH1.6e-6455.46Uncharacterized protein At5g08430 OS=Arabidopsis thaliana GN=At5g08430 PE=1 SV=2[more]
C3H19_ARATH7.2e-2529.75Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana GN=NERD PE... [more]
C3H44_ARATH5.7e-2230.13Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g511... [more]
BLAST of Lsi11G015800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3N2_CUCSA6.2e-12494.54Uncharacterized protein OS=Cucumis sativus GN=Csa_7G252670 PE=4 SV=1[more]
A0A061DK51_THECC9.7e-7761.34Binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_001638 PE=4 SV=1[more]
A0A061DJC6_THECC9.7e-7761.34Binding protein, putative isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_001638 ... [more]
A0A067DW11_CITSI7.7e-7460.08Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019902mg PE=4 SV=1[more]
A0A067DJP7_CITSI7.7e-7460.08Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019902mg PE=4 SV=1[more]
BLAST of Lsi11G015800 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08430.19.0e-6655.46 SWIB/MDM2 domain;Plus-3;GYF[more]
AT5G63700.12.2e-4035.89 zinc ion binding;DNA binding[more]
AT5G23480.12.9e-4041.87 SWIB/MDM2 domain;Plus-3;GYF[more]
AT2G16485.14.1e-2629.75 nucleic acid binding;zinc ion binding;DNA binding[more]
AT3G51120.13.2e-2330.13 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid bindi... [more]
BLAST of Lsi11G015800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092443|ref|XP_008447064.1|5.2e-12494.54PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis melo][more]
gi|659092447|ref|XP_008447066.1|5.2e-12494.54PREDICTED: uncharacterized protein At5g08430 isoform X4 [Cucumis melo][more]
gi|659092441|ref|XP_008447063.1|5.2e-12494.54PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo][more]
gi|659092445|ref|XP_008447065.1|6.8e-12483.27PREDICTED: uncharacterized protein At5g08430 isoform X3 [Cucumis melo][more]
gi|449461126|ref|XP_004148294.1|8.9e-12494.54PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR019835SWIB_domain
IPR004343Plus-3_dom
IPR003121SWIB_MDM2_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016570 histone modification
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G015800.1Lsi11G015800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003121SWIB/MDM2 domainGENE3DG3DSA:1.10.245.10coord: 3..99
score: 9.5
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 18..90
score: 1.1
IPR003121SWIB/MDM2 domainunknownSSF47592SWIB/MDM2 domaincoord: 5..95
score: 8.5
IPR004343Plus-3 domainPFAMPF03126Plus-3coord: 148..238
score: 1.7
IPR004343Plus-3 domainSMARTSM00719rtf1coord: 143..250
score: 1.2
IPR004343Plus-3 domainPROFILEPS51360PLUS3coord: 143..290
score: 10
IPR004343Plus-3 domainunknownSSF159042Plus3-likecoord: 145..238
score: 6.41
IPR019835SWIB domainSMARTSM00151swib_2coord: 17..95
score: 0.
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 2..106
score: 2.0E-53coord: 149..238
score: 2.0
NoneNo IPR availablePANTHERPTHR14445:SF39SWIB/MDM2, PLUS-3 AND GYF DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 2..106
score: 2.0E-53coord: 149..238
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G015800Csa7G252670Cucumber (Chinese Long) v2culsiB499
Lsi11G015800CSPI07G11180Wild cucumber (PI 183967)cpilsiB511
Lsi11G015800Cla005474Watermelon (97103) v1lsiwmB089
Lsi11G015800ClCG09G022920Watermelon (Charleston Gray)lsiwcgB076
Lsi11G015800Cla97C09G184490Watermelon (97103) v2lsiwmbB109
Lsi11G015800Bhi05G001699Wax gourdlsiwgoB114
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G015800Cucumber (Chinese Long) v3cuclsiB533
Lsi11G015800Cucumber (Gy14) v1cgylsiB397
Lsi11G015800Cucurbita maxima (Rimu)cmalsiB474
Lsi11G015800Cucurbita maxima (Rimu)cmalsiB516
Lsi11G015800Cucurbita moschata (Rifu)cmolsiB459
Lsi11G015800Cucurbita pepo (Zucchini)cpelsiB201
Lsi11G015800Cucurbita pepo (Zucchini)cpelsiB606
Lsi11G015800Melon (DHL92) v3.5.1lsimeB091
Lsi11G015800Cucumber (Gy14) v2cgyblsiB468
Lsi11G015800Melon (DHL92) v3.6.1lsimedB097
Lsi11G015800Silver-seed gourdcarlsiB484