Lsi11G013160 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAACTCCTCTTTTTAGTATTCAAATACAAATCAAACTGACCCTTCTTATCCTCATCCATTTATAAAACTATATCTCTTCTTGTTGTTGTTCTTGTAAATTTTCTAAACAAATCAAGAGGTAGCAAAAAACAATGAAGATTGAAAGAGAGATGTTTCACCCTATTCATCCATGGCATAAGCTTAAGCTGAATCACACTGATATCCCTTTCAACTGTGGTGGTTGCCATGAAGCTGGTATTGGCTTCAATTACCAATGCTTTCAATGTGACTTCACCTTGCACAAGCTTTGTGCCATGGCACTTCCCAAAATTACTCACCCTTTCTACTCGAAATGTGCTTTCGAATTCTTCTATTCCCCGCCCGGTGCATCCGCCAGGTACTGTCACTACAAGAAAAAGACTATCTCTCGATGTTGACAATTGTTGGTAGAGACCCAAAAACATGTCGGGAGTTAAACTCCCGACATCGTATATGTTGTTCGGGAGAAACCCGTCGGGAGACTATCTCCCGATGCTGAAATACACCCCGTCAGGAGTTAAAGTTACTCCCAACGTAGTAAATACTGAAATATGCGTCAGGAGTGGATGTCTCCCACGACGCTTGGTCTATGTCCTTGGCAATGCTAGTACTCCTGACGTGTTTGTATACATGTCGGGAGTTGTCCCCGTCTCTTGACGGCTTATTGACGTGTCGTGAGTTTTCATGAGTTGAGGTACCTTCTGAGTGGTTCTCACTCCCGACGCCACGTGTCGTGGCGTCAAAAATATACTATCTGTGGACGCTCACGTCGGAAAATAGAGTGTCTTAATTCATTTATTTATCTTTTTATTGAAATTAAATTTGAAATTTCAACAATGATAACTGATAGTCTGGTGCATGTGCCAGGTACTGTGACGCTTGTCGAAATGATGTTTCAGGGTTTGTTTACCATTGCAAACGTTGCGGTTTCGATCTCCACCCTTGTTGTGCAAACCTGCCTCAAGTGCTTGATGATGGCGAACGCAACCTTTCCCTTAGTATGAAGCTCTCGGGGCCGTGCCACCGCTGCGGAGGCAGGGGACCTGGATGGTCTTACAAGTCTAAATGCAGGGCTTATAACCTTCATTTGTCATGTGTGAAGGAATTGCTAGTAGAGAGTTGGCAAGCTATGTACCTAAAAGTAGACAAGAACAAAGTCATTGAGGTTCAAACAAGGATTCCAAGCCTTAAGGGGACACTCCAAAGTAATCAAAGGGAAAGAGGAAAGGTTGAGCAAGGCTTTCAAATGGCCGGTCGTGCCGTTCGGTGCATCGTCTCCGCTATGCTCGGGGACCCGACAGCCATGATTGCTGCAGTTGTTGGTAGCCTCATATCCAAGTAGAAAGGAGGCAAAAACAACAGAACCAAATTCATGTGTAGTTTTATGTTGTCTTGGTTCTTGTTTGGTCTGTGTGTAAAGTTTATAAGATAATGTTGGTTAAAAAAGTTGTTTCTTTTTTTTTTATTAAATTGTTTGATATATGTTTCATTTAAAAATTCTCCCCCAACTTTTTGGC AAAAAAAACTCCTCTTTTTAGTATTCAAATACAAATCAAACTGACCCTTCTTATCCTCATCCATTTATAAAACTATATCTCTTCTTGTTGTTGTTCTTGTAAATTTTCTAAACAAATCAAGAGGTAGCAAAAAACAATGAAGATTGAAAGAGAGATGTTTCACCCTATTCATCCATGGCATAAGCTTAAGCTGAATCACACTGATATCCCTTTCAACTGTGGTGGTTGCCATGAAGCTGGTATTGGCTTCAATTACCAATGCTTTCAATGTGACTTCACCTTGCACAAGCTTTGTGCCATGGCACTTCCCAAAATTACTCACCCTTTCTACTCGAAATGTGCTTTCGAATTCTTCTATTCCCCGCCCGGTGCATCCGCCAGGTACTGTGACGCTTGTCGAAATGATGTTTCAGGGTTTGTTTACCATTGCAAACGTTGCGGTTTCGATCTCCACCCTTGTTGTGCAAACCTGCCTCAAGTGCTTGATGATGGCGAACGCAACCTTTCCCTTAGTATGAAGCTCTCGGGGCCGTGCCACCGCTGCGGAGGCAGGGGACCTGGATGGTCTTACAAGTCTAAATGCAGGGCTTATAACCTTCATTTGTCATGTGTGAAGGAATTGCTAGTAGAGAGTTGGCAAGCTATGTACCTAAAAGTAGACAAGAACAAAGTCATTGAGGTTCAAACAAGGATTCCAAGCCTTAAGGGGACACTCCAAAGTAATCAAAGGGAAAGAGGAAAGGTTGAGCAAGGCTTTCAAATGGCCGGTCGTGCCGTTCGGTGCATCGTCTCCGCTATGCTCGGGGACCCGACAGCCATGATTGCTGCAGTTGTTGGTAGCCTCATATCCAAGTAGAAAGGAGGCAAAAACAACAGAACCAAATTCATGTGTAGTTTTATGTTGTCTTGGTTCTTGTTTGGTCTGTGTGTAAAGTTTATAAGATAATGTTGGTTAAAAAAGTTGTTTCTTTTTTTTTTATTAAATTGTTTGATATATGTTTCATTTAAAAATTCTCCCCCAACTTTTTGGC ATGAAGATTGAAAGAGAGATGTTTCACCCTATTCATCCATGGCATAAGCTTAAGCTGAATCACACTGATATCCCTTTCAACTGTGGTGGTTGCCATGAAGCTGGTATTGGCTTCAATTACCAATGCTTTCAATGTGACTTCACCTTGCACAAGCTTTGTGCCATGGCACTTCCCAAAATTACTCACCCTTTCTACTCGAAATGTGCTTTCGAATTCTTCTATTCCCCGCCCGGTGCATCCGCCAGGTACTGTGACGCTTGTCGAAATGATGTTTCAGGGTTTGTTTACCATTGCAAACGTTGCGGTTTCGATCTCCACCCTTGTTGTGCAAACCTGCCTCAAGTGCTTGATGATGGCGAACGCAACCTTTCCCTTAGTATGAAGCTCTCGGGGCCGTGCCACCGCTGCGGAGGCAGGGGACCTGGATGGTCTTACAAGTCTAAATGCAGGGCTTATAACCTTCATTTGTCATGTGTGAAGGAATTGCTAGTAGAGAGTTGGCAAGCTATGTACCTAAAAGTAGACAAGAACAAAGTCATTGAGGTTCAAACAAGGATTCCAAGCCTTAAGGGGACACTCCAAAGTAATCAAAGGGAAAGAGGAAAGGTTGAGCAAGGCTTTCAAATGGCCGGTCGTGCCGTTCGGTGCATCGTCTCCGCTATGCTCGGGGACCCGACAGCCATGATTGCTGCAGTTGTTGGTAGCCTCATATCCAAGTAG MKIEREMFHPIHPWHKLKLNHTDIPFNCGGCHEAGIGFNYQCFQCDFTLHKLCAMALPKITHPFYSKCAFEFFYSPPGASARYCDACRNDVSGFVYHCKRCGFDLHPCCANLPQVLDDGERNLSLSMKLSGPCHRCGGRGPGWSYKSKCRAYNLHLSCVKELLVESWQAMYLKVDKNKVIEVQTRIPSLKGTLQSNQRERGKVEQGFQMAGRAVRCIVSAMLGDPTAMIAAVVGSLISK
BLAST of Lsi11G013160 vs. TrEMBL
Match: A0A0A0K1P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G029430 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 2.7e-133 Identity = 221/239 (92.47%), Postives = 227/239 (94.98%), Query Frame = 1
BLAST of Lsi11G013160 vs. TrEMBL
Match: A0A061E3L9_THECC (Cysteine/Histidine-rich C1 domain family protein OS=Theobroma cacao GN=TCM_007611 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 3.3e-99 Identity = 170/240 (70.83%), Postives = 194/240 (80.83%), Query Frame = 1
BLAST of Lsi11G013160 vs. TrEMBL
Match: M5VKD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010622mg PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.4e-97 Identity = 167/242 (69.01%), Postives = 195/242 (80.58%), Query Frame = 1
BLAST of Lsi11G013160 vs. TrEMBL
Match: W9QLH1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013752 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 4.1e-97 Identity = 167/242 (69.01%), Postives = 196/242 (80.99%), Query Frame = 1
BLAST of Lsi11G013160 vs. TrEMBL
Match: A0A0D2SSW8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G012900 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 5.0e-95 Identity = 163/239 (68.20%), Postives = 188/239 (78.66%), Query Frame = 1
BLAST of Lsi11G013160 vs. TAIR10
Match: AT2G16050.1 (AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 274.6 bits (701), Expect = 5.6e-74 Identity = 129/241 (53.53%), Postives = 167/241 (69.29%), Query Frame = 1
BLAST of Lsi11G013160 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 88.2 bits (217), Expect = 7.5e-18 Identity = 45/141 (31.91%), Postives = 62/141 (43.97%), Query Frame = 1
BLAST of Lsi11G013160 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16 Identity = 44/141 (31.21%), Postives = 59/141 (41.84%), Query Frame = 1
BLAST of Lsi11G013160 vs. TAIR10
Match: AT2G37810.1 (AT2G37810.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-16 Identity = 48/141 (34.04%), Postives = 58/141 (41.13%), Query Frame = 1
BLAST of Lsi11G013160 vs. TAIR10
Match: AT2G43220.1 (AT2G43220.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14 Identity = 49/157 (31.21%), Postives = 64/157 (40.76%), Query Frame = 1
BLAST of Lsi11G013160 vs. NCBI nr
Match: gi|449453648|ref|XP_004144568.1| (PREDICTED: uncharacterized protein LOC101218937 [Cucumis sativus]) HSP 1 Score: 482.6 bits (1241), Expect = 3.9e-133 Identity = 221/239 (92.47%), Postives = 227/239 (94.98%), Query Frame = 1
BLAST of Lsi11G013160 vs. NCBI nr
Match: gi|659100601|ref|XP_008451176.1| (PREDICTED: uncharacterized protein LOC103492553 [Cucumis melo]) HSP 1 Score: 478.8 bits (1231), Expect = 5.6e-132 Identity = 220/239 (92.05%), Postives = 228/239 (95.40%), Query Frame = 1
BLAST of Lsi11G013160 vs. NCBI nr
Match: gi|590689055|ref|XP_007043120.1| (Cysteine/Histidine-rich C1 domain family protein [Theobroma cacao]) HSP 1 Score: 369.4 bits (947), Expect = 4.8e-99 Identity = 170/240 (70.83%), Postives = 194/240 (80.83%), Query Frame = 1
BLAST of Lsi11G013160 vs. NCBI nr
Match: gi|595793229|ref|XP_007200363.1| (hypothetical protein PRUPE_ppa010622mg [Prunus persica]) HSP 1 Score: 363.2 bits (931), Expect = 3.4e-97 Identity = 167/242 (69.01%), Postives = 195/242 (80.58%), Query Frame = 1
BLAST of Lsi11G013160 vs. NCBI nr
Match: gi|703077966|ref|XP_010090730.1| (hypothetical protein L484_013752 [Morus notabilis]) HSP 1 Score: 362.5 bits (929), Expect = 5.8e-97 Identity = 167/242 (69.01%), Postives = 196/242 (80.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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