Carg16126 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGCACCTCCCAACTCACCTTCATATAAGCACAATTCGAACAACAACAACAACATCAATAACATGAAGATCGAGAAAGAGCTAACCCACCCGATCCACCCGCGCCACAAGCTACGTCTCGAGTACACTGAAACCCCTTACAATTGCGACGGGTGCAAGGAAGCTGGCATTGGCTACAAATACAAATGTCACCAATGTGCCTTCACCTTACACAAGGCGTGCGCCATTGCCACGCCACGAACCACCCATCCGTTCTACCAAAAATGCGAGTTCAAATTATACTACCATCCCCCCGGCAAATGCAAGCGCGTATGCGATGCATGTAGAACCTACGTGCATGGATTTGTGTACCATTGCGATAGCTGTGACTTTGATTTACATCCTTGTTGCGCGAACCTCCCGCAAGTCCTCGACGATGGGAAGCGCGATCTTTACCTTTGTAGCAAGCTATCTAGCTCGTGTCACGGCTGCGGTGGAACGGGGCTCGGTTGGTCTTATAGGTCGCAGTGCGGGGCGTATAATCTTCATCTTTCGTGTGTGAAGGAGATGCTGGTGGAGAGCTGGTTGGCTGTGTATTTGAATGTGGATAAGAATAGGGTTAGGCAAATGGTTACGAGTATTCCAAGGCTTAAGGGGTCGCTGCAAAACCGTCCTGTGGTAAGAGGGTCAGTTGGGAAGTATGGTCAGATGGCTGGTGCTGCAGCTCGTGCTGTTGTCTCGGCTGTTTTGGGGGACCCTACGGCTATGGTTGCAGCTGTGGTTAGTGGCATCGTGTCGAAGTGA ATGCTTGCACCTCCCAACTCACCTTCATATAAGCACAATTCGAACAACAACAACAACATCAATAACATGAAGATCGAGAAAGAGCTAACCCACCCGATCCACCCGCGCCACAAGCTACGTCTCGAGTACACTGAAACCCCTTACAATTGCGACGGGTGCAAGGAAGCTGGCATTGGCTACAAATACAAATGTCACCAATGTGCCTTCACCTTACACAAGGCGTGCGCCATTGCCACGCCACGAACCACCCATCCGTTCTACCAAAAATGCGAGTTCAAATTATACTACCATCCCCCCGGCAAATGCAAGCGCGTATGCGATGCATGTAGAACCTACGTGCATGGATTTGTGTACCATTGCGATAGCTGTGACTTTGATTTACATCCTTGTTGCGCGAACCTCCCGCAAGTCCTCGACGATGGGAAGCGCGATCTTTACCTTTGTAGCAAGCTATCTAGCTCGTGTCACGGCTGCGGTGGAACGGGGCTCGGTTGGTCTTATAGGTCGCAGTGCGGGGCGTATAATCTTCATCTTTCGTGTGTGAAGGAGATGCTGGTGGAGAGCTGGTTGGCTGTGTATTTGAATGTGGATAAGAATAGGGTTAGGCAAATGGTTACGAGTATTCCAAGGCTTAAGGGGTCGCTGCAAAACCGTCCTGTGGTAAGAGGGTCAGTTGGGAAGTATGGTCAGATGGCTGGTGCTGCAGCTCGTGCTGTTGTCTCGGCTGTTTTGGGGGACCCTACGGCTATGGTTGCAGCTGTGGTTAGTGGCATCGTGTCGAAGTGA ATGCTTGCACCTCCCAACTCACCTTCATATAAGCACAATTCGAACAACAACAACAACATCAATAACATGAAGATCGAGAAAGAGCTAACCCACCCGATCCACCCGCGCCACAAGCTACGTCTCGAGTACACTGAAACCCCTTACAATTGCGACGGGTGCAAGGAAGCTGGCATTGGCTACAAATACAAATGTCACCAATGTGCCTTCACCTTACACAAGGCGTGCGCCATTGCCACGCCACGAACCACCCATCCGTTCTACCAAAAATGCGAGTTCAAATTATACTACCATCCCCCCGGCAAATGCAAGCGCGTATGCGATGCATGTAGAACCTACGTGCATGGATTTGTGTACCATTGCGATAGCTGTGACTTTGATTTACATCCTTGTTGCGCGAACCTCCCGCAAGTCCTCGACGATGGGAAGCGCGATCTTTACCTTTGTAGCAAGCTATCTAGCTCGTGTCACGGCTGCGGTGGAACGGGGCTCGGTTGGTCTTATAGGTCGCAGTGCGGGGCGTATAATCTTCATCTTTCGTGTGTGAAGGAGATGCTGGTGGAGAGCTGGTTGGCTGTGTATTTGAATGTGGATAAGAATAGGGTTAGGCAAATGGTTACGAGTATTCCAAGGCTTAAGGGGTCGCTGCAAAACCGTCCTGTGGTAAGAGGGTCAGTTGGGAAGTATGGTCAGATGGCTGGTGCTGCAGCTCGTGCTGTTGTCTCGGCTGTTTTGGGGGACCCTACGGCTATGGTTGCAGCTGTGGTTAGTGGCATCGTGTCGAAGTGA MLAPPNSPSYKHNSNNNNNINNMKIEKELTHPIHPRHKLRLEYTETPYNCDGCKEAGIGYKYKCHQCAFTLHKACAIATPRTTHPFYQKCEFKLYYHPPGKCKRVCDACRTYVHGFVYHCDSCDFDLHPCCANLPQVLDDGKRDLYLCSKLSSSCHGCGGTGLGWSYRSQCGAYNLHLSCVKEMLVESWLAVYLNVDKNRVRQMVTSIPRLKGSLQNRPVVRGSVGKYGQMAGAAARAVVSAVLGDPTAMVAAVVSGIVSK
BLAST of Carg16126 vs. NCBI nr
Match: XP_022944065.1 (uncharacterized protein LOC111448615 [Cucurbita moschata]) HSP 1 Score: 474.2 bits (1219), Expect = 2.9e-130 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg16126 vs. NCBI nr
Match: XP_023512247.1 (uncharacterized protein LOC111777035 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 474.2 bits (1219), Expect = 2.9e-130 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg16126 vs. NCBI nr
Match: XP_022986196.1 (uncharacterized protein LOC111484011 [Cucurbita maxima]) HSP 1 Score: 466.5 bits (1199), Expect = 6.1e-128 Identity = 219/224 (97.77%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of Carg16126 vs. NCBI nr
Match: XP_004139981.1 (PREDICTED: uncharacterized protein LOC101214474 [Cucumis sativus] >KGN46638.1 hypothetical protein Csa_6G117200 [Cucumis sativus]) HSP 1 Score: 409.8 bits (1052), Expect = 6.8e-111 Identity = 186/224 (83.04%), Postives = 201/224 (89.73%), Query Frame = 0
BLAST of Carg16126 vs. NCBI nr
Match: XP_008448154.1 (PREDICTED: uncharacterized protein LOC103490439 [Cucumis melo]) HSP 1 Score: 407.9 bits (1047), Expect = 2.6e-110 Identity = 185/224 (82.59%), Postives = 201/224 (89.73%), Query Frame = 0
BLAST of Carg16126 vs. TAIR10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 229.6 bits (584), Expect = 2.3e-60 Identity = 111/230 (48.26%), Postives = 147/230 (63.91%), Query Frame = 0
BLAST of Carg16126 vs. TAIR10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 88.6 bits (218), Expect = 6.3e-18 Identity = 44/141 (31.21%), Postives = 63/141 (44.68%), Query Frame = 0
BLAST of Carg16126 vs. TAIR10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17 Identity = 46/139 (33.09%), Postives = 63/139 (45.32%), Query Frame = 0
BLAST of Carg16126 vs. TAIR10
Match: AT2G37810.1 (Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 79.7 bits (195), Expect = 2.9e-15 Identity = 43/144 (29.86%), Postives = 65/144 (45.14%), Query Frame = 0
BLAST of Carg16126 vs. TAIR10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12 Identity = 34/110 (30.91%), Postives = 50/110 (45.45%), Query Frame = 0
BLAST of Carg16126 vs. Swiss-Prot
Match: sp|Q7Y0E8|NRX11_ORYSJ (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 8.4e-04 Identity = 16/32 (50.00%), Postives = 20/32 (62.50%), Query Frame = 0
BLAST of Carg16126 vs. TrEMBL
Match: tr|A0A0A0KAV5|A0A0A0KAV5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117200 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 4.5e-111 Identity = 186/224 (83.04%), Postives = 201/224 (89.73%), Query Frame = 0
BLAST of Carg16126 vs. TrEMBL
Match: tr|A0A1S3BJX3|A0A1S3BJX3_CUCME (uncharacterized protein LOC103490439 OS=Cucumis melo OX=3656 GN=LOC103490439 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 1.7e-110 Identity = 185/224 (82.59%), Postives = 201/224 (89.73%), Query Frame = 0
BLAST of Carg16126 vs. TrEMBL
Match: tr|A0A061E3L9|A0A061E3L9_THECC (Cysteine/Histidine-rich C1 domain family protein OS=Theobroma cacao OX=3641 GN=TCM_007611 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 5.7e-90 Identity = 157/225 (69.78%), Postives = 184/225 (81.78%), Query Frame = 0
BLAST of Carg16126 vs. TrEMBL
Match: tr|A0A2N9I7Q2|A0A2N9I7Q2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48320 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87 Identity = 155/228 (67.98%), Postives = 179/228 (78.51%), Query Frame = 0
BLAST of Carg16126 vs. TrEMBL
Match: tr|A0A2G5EMJ9|A0A2G5EMJ9_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700973v1 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 7.7e-87 Identity = 153/225 (68.00%), Postives = 178/225 (79.11%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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