Lsi11G011580 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G011580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr11 : 20137523 .. 20140640 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTCGCTTGCCTAGTATCATTCATGCTAAGCAAAGTTTTCGGCGATCTTCGTCAACAGGAAATGGAGCATCTCCAAAAGCTTTAGATGTTCCAAAGGGCTACTTTACTGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTGCTTGAACCAACCCTTATTTCAAGATTTATTGAGTCAATCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAACTTTTCTCAGTCTCACAAAGCTGAACAACTCATTAACCAGAAGGATCAATTTAGAAAACTAGGCAGCACAGAAAAAGGATTAGAATAGCACAGAATGTAAACTATAACATATATACATATTTTTTTAATGAAATAGCTTGATTCTTTAAATTGAAACAGTGTTGTACAGTGTTCATAATTCTTTTTATCTTTCTCTTCTCCTCCACATTTGCTGCTTAGCGTTATGCAGTTCAAGATCAGTAAAGAGACCTCTTAATTTTTCTTCACAAGAAATCGAGTAGTACTCGTCATTCGACACAACGTTTTAAGCTAACTCATTAATTTTTACTTGAATTTTTAATCAAACGATGATGAAAAACATTGTGATTTCCATGTAACTAACTGTTTTAAGATCCTTAAGATGTTTTACACAAGATCTAAGCAAGGTGAGTATCAAATTAAGAGTCTTTTAGTTGAAGGTCAGTATGAAATTGGAACATTAATTAGATGATGAGACTAATTACTGTGGTTAACAAAGTTCTGAGGATGTCTTATCAAGAAGCTGGATTGATATTAGATTATGCACTTGATTCAAGTGAGGTTAATACTCAGAAACATACCATAGATTATGTGGGATCCATCTAGAATATTTCACCAAGCAATGTGTAGATTGTACACCTACCAATGAGAACCATATTAATGATAATAAGTTAGAAAGCAAAACCATGTGATATCCATAAATGACTCTAATGCACTGTCCTATCTTTTCCCTAGCTTTATTTGAAAATGGGGTTCTCATTCTGGAATGGTTGTGAACATTATGCATCTCAAAAACGAAGAAGAAGACAAAGAGGAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGAAGAAGAAGACAAAGAAAAAAAAAAAAAAAAAAAAAAGGAAGAAAAAGGTAGTCACAATCACTACTAATCTCTATTAATCAGCTTGAAGGTACAGAGAAAATTGGATTGTATACCCACTTTTGAAAGATTCACAAAGAAAGTGATTCCAAGATCCATTTGACTATTTTCTTTTTCTTCTTTTAAAAAAGGAAATATGACTTTTCATTGATAAAATGAAAAGAGACTAATGCTCAAAGATACAGTAACCTTTAAAAGATAGAGAAATTGCAATAAAAAGAAAGAAGAAAAAAAACTTGGGATACAAAGAGGAGAAGACATCAAAAAGCAAATTCTTAAAATCTATTTGACTACTTAAATCCCAAGTTCGAACCTTCAGATGAGCTTAATACTAGTAATTGGATGGGTTTGAATTCTAATGTAATCCAAAATTCATATTTGAATTGAACGTTTTATACTGGATTTGTAATACTGAACTCATTCTGTTCTCACAATTTTCAATCCGACCCTCTTTCTTACCGTTTTCATGCTTCATGATCTCATTTTCGTTCCGTCATTAATTCCTCACACATCCCAACACTCCTCAGATTCTCAGTAATCTAGTTACATTCTAACCCCCCAAACAACCCCTTATTGTCTCCTAGGTTCGGACCTTGGAGCAGTAGTGGGTGCCCCAAGTATAAAATACGTTGAGTTCACCATTATTTGTAAAAACTCACTGAATGAGATTAAACATCAATAGCTTTTAGTGCTAACAAAACGCTGCCTCCATTTCCTCTTCTTTTTCTCTTAATGTTTTAAATGTTTTTCTTTTTTTAAACAAGAAACAACTTTTTGTTAATAGAGGGAAAGGAAATTGTTCAACGATAGAAGCTCCCAAAAGAGAACAAAAAAGAAAACAAGAGAAAACATGGAAGAAACAGAAACAAGAACAAAGTTCAAAATAACAAAACTAAAGGCCTTTCAATTTGAAGTGGTCTTGCTATCATCAAGAGAGAAGCAGGAAGGGTCTTTCAAGACTTCTGCAAGAAGCTTGCTTCTGAATTCCTCTATAAGGGTTGAACGAGCTTCAATTAACTTCATCTTATATTGAAGATGGATCTCTAGAGTCCTTTTAGAGTAAGACTCTTTACAAAGGATCTTTTCTCGTTGCGGAGAGAAACCAACTCCGCGTCAAGCTGATCAATCAAACAGCTTTAGACTCCATAATATAACCATAGAAAAGTTGATGCAGGAAGGAAGCTTGCTGAGCCAATGTTTTGAAAGCAATGATCCTCAACCAGCTGAAAAATTAGGTTCAGTCCTTTGTTAAAAAAAAAAAAAAAAAAACCCAAATCTTTCATTTATGATAAAGAAACTAATACCTTGAGGTTATTCATCAACAACTTGTGTGAAAGTTGTTTGACTTTCCTCTGGCTACTTGACACAAATAACTAAATGGTTTCCTTTAAAGAAAGAAAAAAAGATAATTTCATTGATGAAATGAAATTACAAAAAGAGGGGGGAGGAAAGCCAAAAACCCCAAGCCAAGGAAATTACAAAAAGGTCTTCCAATTGGCACAAAGATAAAATAGAATAAGTGTTGAAAGGAGCATAATATTTACACCATGAGAGAGCAACCAAAAATATATGATCCATGAAGCTTCCTTCATGCATAGTTCAATTATCAAAAAAATTTCCAACTTTTGAACCTTTTAGAATCTCATACTGCTTAAGAAATACCATATCACAATGGGTTTCCATTTGCCTAGTATTGTTTATGCTAAGCAAAGTCTTCAACGATCTACATTAACAGGAAATGGGGCATCTTCAAAAGCGGTAGCTGTTCCAAAAGGCTACTTCACAGTTTATATTGACAAGGAACAAAAGATGCATTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTTCCAGACTTGTAG

mRNA sequence

ATGGGTTTTCGCTTGCCTAGTATCATTCATGCTAAGCAAAGTTTTCGGCGATCTTCGTCAACAGGAAATGGAGCATCTCCAAAAGCTTTAGATGTTCCAAAGGGCTACTTTACTGTTTATGTTGGTGAGAATCTCATACTGCTTAAGAAATACCATATCACAATGGGTTTCCATTTGCCTAGTATTGTTTATGCTAAGCAAAGTCTTCAACGATCTACATTAACAGGAAATGGGGCATCTTCAAAAGCGGTAGCTGTTCCAAAAGGCTACTTCACAGTTTATATTGACAAGGAACAAAAGATGCATTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTTCCAGACTTGTAG

Coding sequence (CDS)

ATGGGTTTTCGCTTGCCTAGTATCATTCATGCTAAGCAAAGTTTTCGGCGATCTTCGTCAACAGGAAATGGAGCATCTCCAAAAGCTTTAGATGTTCCAAAGGGCTACTTTACTGTTTATGTTGGTGAGAATCTCATACTGCTTAAGAAATACCATATCACAATGGGTTTCCATTTGCCTAGTATTGTTTATGCTAAGCAAAGTCTTCAACGATCTACATTAACAGGAAATGGGGCATCTTCAAAAGCGGTAGCTGTTCCAAAAGGCTACTTCACAGTTTATATTGACAAGGAACAAAAGATGCATTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTTCCAGACTTGTAG

Protein sequence

MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGENLILLKKYHITMGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL

Homology

[Close]

BLAST of Lsi11G011580 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-09
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP I       +++++  N ASSK+V VPKGY  VY+  + +  F+IP+SYLNQPS
Sbjct: 1   MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGDKMR-RFLIPVSYLNQPS 56

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 56

[Close]

BLAST of Lsi11G011580 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP I       ++++ + N ASSKAV V KGY  VY+ ++ +  FVIP+SYLN+PS
Sbjct: 1   MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVGEKMR-RFVIPVSYLNKPS 56

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 56

[Close]

BLAST of Lsi11G011580 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.2e-07
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTG-NGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQP 114
           MGF LP I        R TL+  N ASSK +  PKGY  VY+ +  K  FVIP+S+LNQP
Sbjct: 1   MGFRLPGI--------RKTLSARNEASSKVLDAPKGYLAVYVGENMK-RFVIPVSHLNQP 56

Query: 115 SFPDL 119
            F DL
Sbjct: 61  LFQDL 56

[Close]

BLAST of Lsi11G011580 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST  G+ A       PKG+  VY+ + QK  +++PLSYL+QPSF  L
Sbjct: 6   SLLGAKKILSRSTAAGSAA-------PKGFLAVYVGESQKKRYLVPLSYLSQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-06
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST  G+ A       PKG+  VY+ + QK  +++P+SYLNQPSF  L
Sbjct: 6   SLLGAKKILSRSTGAGSAA-------PKGFLAVYVGESQKKRYLVPVSYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TrEMBL
Match: A0A0A0K4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008980 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18
Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS KAV VPKGYF VYI +EQK  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. TrEMBL
Match: A0A0A0K160_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008990 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-18
Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV +KQSLQRS+ TGNG S KAV VPKGYFTVY+ +EQK  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTSKQSLQRSSSTGNGESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. TrEMBL
Match: A0A0A0K5T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009020 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.1e-18
Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS K V VPKGYFTVY+ +E K  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKVVDVPKGYFTVYVGEEHKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. TrEMBL
Match: A0A118K2C1_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017564 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-16
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 1


Query: 1   MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGEN-----LILLKKYHI-T 60
           M   +P II AKQ  RRS S  NG++   + +PKGYF VYVGE      +      H   
Sbjct: 1   MAILMPRIIQAKQILRRSLS--NGSNNTYMAIPKGYFAVYVGEQDKKRFVNATNSAHFGK 60

Query: 61  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 119
           M   +P I+ AKQ L+RS    NG+S+  +A+PKGYF VY+ +++K  FV+P++ L QP+
Sbjct: 61  MAIFMPRIIQAKQILRRS--LSNGSSNIYMAIPKGYFVVYVGEQEKKRFVVPIALLGQPA 120

[Close]

BLAST of Lsi11G011580 vs. TrEMBL
Match: A0A0A0K0H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009010 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.6e-16
Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AK SLQRS+ TGNGAS K++ VPKGYFTVY+ + +K  FVIPLSYLNQ S
Sbjct: 1   MGFRLPRIVTAKPSLQRSSSTGNGASPKSIDVPKGYFTVYVGEVEKKRFVIPLSYLNQSS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1


Query: 55  MGFHLPSIVYA-KQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQP 114
           M   +P ++ + KQ L+++ L  + +SS ++ VPKGY  VY+ ++    FV+P+SYL+QP
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 115 SFPDL 119
           SF DL
Sbjct: 61  SFQDL 65

[Close]

BLAST of Lsi11G011580 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST  G+ A       PKG+  VY+ + QK  +++PLSYL+QPSF  L
Sbjct: 6   SLLGAKKILSRSTAAGSAA-------PKGFLAVYVGESQKKRYLVPLSYLSQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 52.0 bits (123), Expect = 2.9e-07
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST  G+ A       PKG+  VY+ + QK  +++P+SYLNQPSF  L
Sbjct: 6   SLLGAKKILSRSTGAGSAA-------PKGFLAVYVGESQKKRYLVPVSYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 51.6 bits (122), Expect = 3.8e-07
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST       + A A PKG+  VY+ + QK  +++P+SYLNQPSF  L
Sbjct: 6   SLLGAKKILSRST-------TAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 50.8 bits (120), Expect = 6.5e-07
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 61  SIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPSFPDL 119
           S++ AK+ L RST       +   A PKG+  VY+ + QK  +++PLSYLNQPSF  L
Sbjct: 6   SLLGAKKILSRST-------AAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQAL 56

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: gi|778722823|ref|XP_011658575.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-18
Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS KAV VPKGYF VYI +EQK  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: gi|659094352|ref|XP_008448014.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-18
Identity = 50/64 (78.12%), Postives = 53/64 (82.81%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS KA+ VPKGYF VYI +EQK  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAIDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: gi|778722820|ref|XP_011658574.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 4.5e-18
Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV +KQSLQRS+ TGNG S KAV VPKGYFTVY+ +EQK  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTSKQSLQRSSSTGNGESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: gi|778722830|ref|XP_004144905.2| (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-18
Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 1


Query: 55  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 114
           MGF LP IV AKQSLQRS+ TGNGAS K V VPKGYFTVY+ +E K  FVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKVVDVPKGYFTVYVGEEHKKRFVIPLSYLNQPS 60

Query: 115 FPDL 119
           F DL
Sbjct: 61  FQDL 64

[Close]

BLAST of Lsi11G011580 vs. NCBI nr
Match: gi|976918995|gb|KVI04141.1| (Auxin responsive SAUR protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 1


Query: 1   MGFRLPSIIHAKQSFRRSSSTGNGASPKALDVPKGYFTVYVGEN-----LILLKKYHI-T 60
           M   +P II AKQ  RRS S  NG++   + +PKGYF VYVGE      +      H   
Sbjct: 1   MAILMPRIIQAKQILRRSLS--NGSNNTYMAIPKGYFAVYVGEQDKKRFVNATNSAHFGK 60

Query: 61  MGFHLPSIVYAKQSLQRSTLTGNGASSKAVAVPKGYFTVYIDKEQKMHFVIPLSYLNQPS 119
           M   +P I+ AKQ L+RS    NG+S+  +A+PKGYF VY+ +++K  FV+P++ L QP+
Sbjct: 61  MAIFMPRIIQAKQILRRS--LSNGSSNIYMAIPKGYFVVYVGEQEKKRFVVPIALLGQPA 120

The following BLAST results are available for this feature:

BLAST of Lsi11G011580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AX10A_SOYBN	5.0e-09	50.00	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]
AX6B_SOYBN	2.5e-08	50.00	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
ARG7_VIGRR	6.2e-07	50.77	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
SAU19_ARATH	4.0e-06	44.83	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU24_ARATH	5.2e-06	44.83	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]

BLAST of Lsi11G011580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4J0_CUCSA	1.1e-18	79.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008980 PE=4 SV=1	[more]
A0A0A0K160_CUCSA	3.2e-18	76.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008990 PE=4 SV=1	[more]
A0A0A0K5T8_CUCSA	4.1e-18	76.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009020 PE=4 SV=1	[more]
A0A118K2C1_CYNCS	1.0e-16	42.74	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017564...	[more]
A0A0A0K0H9_CUCSA	6.6e-16	70.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009010 PE=4 SV=1	[more]

BLAST of Lsi11G011580 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.4e-09	41.54	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	2.2e-07	44.83	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.9e-07	44.83	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.8e-07	44.83	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	6.5e-07	44.83	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi11G011580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722823\|ref\|XP_011658575.1\|	1.6e-18	79.69	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659094352\|ref\|XP_008448014.1\|	2.0e-18	78.13	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778722820\|ref\|XP_011658574.1\|	4.5e-18	76.56	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778722830\|ref\|XP_004144905.2\|	5.9e-18	76.56	PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]	[more]
gi\|976918995\|gb\|KVI04141.1\|	1.5e-16	42.74	Auxin responsive SAUR protein [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011580.1	Lsi11G011580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 71..118 score: 6.
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 55..118 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G011580	MELO3C013394.2	Melon (DHL92) v3.6.1	lsimedB102
Lsi11G011580	Bhi05G001519	Wax gourd	lsiwgoB118
Lsi11G011580	CsaV3_7G000590	Cucumber (Chinese Long) v3	cuclsiB529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G011580	Watermelon (97103) v2	lsiwmbB080
Lsi11G011580	Watermelon (97103) v2	lsiwmbB086
Lsi11G011580	Watermelon (97103) v2	lsiwmbB104
Lsi11G011580	Wax gourd	lsiwgoB123
Lsi11G011580	Wax gourd	lsiwgoB128
Lsi11G011580	Cucumber (Gy14) v1	cgylsiB258
Lsi11G011580	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi11G011580	Cucumber (Gy14) v1	cgylsiB618
Lsi11G011580	Cucurbita maxima (Rimu)	cmalsiB100
Lsi11G011580	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G011580	Cucurbita maxima (Rimu)	cmalsiB514
Lsi11G011580	Cucurbita maxima (Rimu)	cmalsiB562
Lsi11G011580	Cucurbita maxima (Rimu)	cmalsiB711
Lsi11G011580	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G011580	Cucurbita moschata (Rifu)	cmolsiB151
Lsi11G011580	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G011580	Cucurbita moschata (Rifu)	cmolsiB500
Lsi11G011580	Cucurbita moschata (Rifu)	cmolsiB705
Lsi11G011580	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G011580	Cucurbita pepo (Zucchini)	cpelsiB231
Lsi11G011580	Cucurbita pepo (Zucchini)	cpelsiB605
Lsi11G011580	Cucurbita pepo (Zucchini)	cpelsiB662
Lsi11G011580	Wild cucumber (PI 183967)	cpilsiB097
Lsi11G011580	Wild cucumber (PI 183967)	cpilsiB101
Lsi11G011580	Wild cucumber (PI 183967)	cpilsiB506
Lsi11G011580	Cucumber (Chinese Long) v2	culsiB103
Lsi11G011580	Cucumber (Chinese Long) v2	culsiB104
Lsi11G011580	Cucumber (Chinese Long) v2	culsiB494
Lsi11G011580	Melon (DHL92) v3.5.1	lsimeB096
Lsi11G011580	Melon (DHL92) v3.5.1	lsimeB108
Lsi11G011580	Watermelon (Charleston Gray)	lsiwcgB097
Lsi11G011580	Watermelon (Charleston Gray)	lsiwcgB116
Lsi11G011580	Watermelon (97103) v1	lsiwmB091
Lsi11G011580	Watermelon (97103) v1	lsiwmB106
Lsi11G011580	Watermelon (97103) v1	lsiwmB111
Lsi11G011580	Cucumber (Gy14) v2	cgyblsiB090
Lsi11G011580	Cucumber (Gy14) v2	cgyblsiB093
Lsi11G011580	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G011580	Melon (DHL92) v3.6.1	lsimedB093
Lsi11G011580	Melon (DHL92) v3.6.1	lsimedB116
Lsi11G011580	Silver-seed gourd	carlsiB124
Lsi11G011580	Silver-seed gourd	carlsiB290
Lsi11G011580	Cucumber (Chinese Long) v3	cuclsiB109
Lsi11G011580	Cucumber (Chinese Long) v3	cuclsiB112