CsaV3_7G000590 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGCTTGCCTAGTATTGTTCATGCTAAGCAAAGTTTTCAGCGTTCTTCAACAATGAGAAATGGAGCATCTCCAACGGTTGTAGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGACACAGAAGAGGCGTTTCGTCATCCCGCTATCTTGCTTGAACCAACCTTCATTTCAAGATTTATTAAGTCAAGCAGAAGAAGAGTTTGGATATGATCATTCAATGGGTGGCATCACAATTCCTTGCAGTGAAGCAATTTTTCTCAGTCTCACACAAAGCTGA ATGGGTTTCCGCTTGCCTAGTATTGTTCATGCTAAGCAAAGTTTTCAGCGTTCTTCAACAATGAGAAATGGAGCATCTCCAACGGTTGTAGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGACACAGAAGAGGCGTTTCGTCATCCCGCTATCTTGCTTGAACCAACCTTCATTTCAAGATTTATTAAGTCAAGCAGAAGAAGAGTTTGGATATGATCATTCAATGGGTGGCATCACAATTCCTTGCAGTGAAGCAATTTTTCTCAGTCTCACACAAAGCTGA ATGGGTTTCCGCTTGCCTAGTATTGTTCATGCTAAGCAAAGTTTTCAGCGTTCTTCAACAATGAGAAATGGAGCATCTCCAACGGTTGTAGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGACACAGAAGAGGCGTTTCGTCATCCCGCTATCTTGCTTGAACCAACCTTCATTTCAAGATTTATTAAGTCAAGCAGAAGAAGAGTTTGGATATGATCATTCAATGGGTGGCATCACAATTCCTTGCAGTGAAGCAATTTTTCTCAGTCTCACACAAAGCTGA MGFRLPSIVHAKQSFQRSSTMRNGASPTVVDVPKGYFTVYVGETQKRRFVIPLSCLNQPSFQDLLSQAEEEFGYDHSMGGITIPCSEAIFLSLTQS
BLAST of CsaV3_7G000590 vs. NCBI nr
Match: KGN43199.1 (hypothetical protein Csa_7G008460 [Cucumis sativus]) HSP 1 Score: 199.9 bits (507), Expect = 3.9e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. NCBI nr
Match: XP_022989153.1 (auxin-induced protein 15A-like [Cucurbita maxima]) HSP 1 Score: 169.5 bits (428), Expect = 5.7e-39 Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. NCBI nr
Match: XP_022989148.1 (auxin-induced protein 15A-like [Cucurbita maxima]) HSP 1 Score: 169.5 bits (428), Expect = 5.7e-39 Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. NCBI nr
Match: XP_022135743.1 (auxin-induced protein 15A-like [Momordica charantia]) HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38 Identity = 80/96 (83.33%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. NCBI nr
Match: XP_022135742.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37 Identity = 77/95 (81.05%), Postives = 84/95 (88.42%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TAIR10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TAIR10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 103.6 bits (257), Expect = 7.0e-23 Identity = 47/88 (53.41%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TAIR10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.5 bits (249), Expect = 5.9e-22 Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TAIR10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.5 bits (249), Expect = 5.9e-22 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TAIR10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.1 bits (248), Expect = 7.7e-22 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.8e-26 Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. Swiss-Prot
Match: sp|P33080|AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.2e-25 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.6e-24 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. Swiss-Prot
Match: sp|P33082|AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23 Identity = 56/94 (59.57%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. Swiss-Prot
Match: sp|P33079|A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23 Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TrEMBL
Match: tr|A0A0A0K2F0|A0A0A0K2F0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008460 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.6e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TrEMBL
Match: tr|A0A0A0K4J0|A0A0A0K4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-36 Identity = 77/96 (80.21%), Postives = 83/96 (86.46%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TrEMBL
Match: tr|A0A0A0K5T8|A0A0A0K5T8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009020 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.3e-36 Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TrEMBL
Match: tr|A0A1S3BIR8|A0A1S3BIR8_CUCME (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490323 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 6.7e-36 Identity = 77/96 (80.21%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of CsaV3_7G000590 vs. TrEMBL
Match: tr|A0A1S3BIR0|A0A1S3BIR0_CUCME (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490324 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.3e-35 Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |