Lsi11G010650 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G010650
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMitochondrial transcription termination factor family protein
Locationchr11 : 18579831 .. 18580661 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTGGAGCTGCAACTTCATTCACCACCGTCTCTTCCTTCTCTCCCTCGAACGCTCCCACTCCCAGATCTCGCCTTCATCTTCCTCCTCCATTCATCAACTTTCGCACTCCACATCATCAAAACCTCCGTTACCTCAAATCCCTCCGCATCATCGATTCCCGAACCAGATTCCATTCTCCCGACGCCGTCGATCAAATCCTCACCACCGTCCATTTCCTCAAATCCAAGGGCTTCTCCGACTCCGATTTCCCCAGACTCGCCTTCCTCTGCCCTCAACTCTTCACTCCCAACTTCGATCCCACCGACATTGCCCCCATCTTCCACTTCCTCGCCGCCGATCTATCCGCTTCCGTCCAAGAATCGCGCGGATTAATCCTCCAGTGCCCTAGGATTCTGTTATCCGACGTGGAGTTGTGTCTCCGGCCTACGTATAGATTCCTGAAGCAATTAGGGATTGAGAATCTGAAATCGCCAAGCAATTTGAATTCACACCTGCTGAACACTCGGGTGGAGAAGCTAAGAAGCAAAATGAGATTCTTACAGGAGATCGGATTGTCGCACGAGGAGGCAGCGAAGGTTTGCGGGAGAATGCCGGCGATGTTCGGGTACAGTGTGGAGGAGAATTTGAAGCCAAAATATGAGTATTTGGTGACGGAGATGGAGAGAGATTTGGAGGAATTAAAAGAGTTTCCTCAGTATTTTGGGTTCAGTTTGGAAGGACGAATTATACCTCGACATTTGCATTTGAAACAAAGGAATTGCCGAATTCCTCTTAATAGAATGCTGTTGTGGAGTGACAATAGGTTTTACTCTAAATGGAAATGA

mRNA sequence

ATGGCGGTTGGAGCTGCAACTTCATTCACCACCGTCTCTTCCTTCTCTCCCTCGAACGCTCCCACTCCCAGATCTCGCCTTCATCTTCCTCCTCCATTCATCAACTTTCGCACTCCACATCATCAAAACCTCCGTTACCTCAAATCCCTCCGCATCATCGATTCCCGAACCAGATTCCATTCTCCCGACGCCGTCGATCAAATCCTCACCACCGTCCATTTCCTCAAATCCAAGGGCTTCTCCGACTCCGATTTCCCCAGACTCGCCTTCCTCTGCCCTCAACTCTTCACTCCCAACTTCGATCCCACCGACATTGCCCCCATCTTCCACTTCCTCGCCGCCGATCTATCCGCTTCCGTCCAAGAATCGCGCGGATTAATCCTCCAGTGCCCTAGGATTCTGTTATCCGACGTGGAGTTGTGTCTCCGGCCTACGTATAGATTCCTGAAGCAATTAGGGATTGAGAATCTGAAATCGCCAAGCAATTTGAATTCACACCTGCTGAACACTCGGGTGGAGAAGCTAAGAAGCAAAATGAGATTCTTACAGGAGATCGGATTGTCGCACGAGGAGGCAGCGAAGGTTTGCGGGAGAATGCCGGCGATGTTCGGGTACAGTGTGGAGGAGAATTTGAAGCCAAAATATGAGTATTTGGTGACGGAGATGGAGAGAGATTTGGAGGAATTAAAAGAGTTTCCTCAGTATTTTGGGTTCAGTTTGGAAGGACGAATTATACCTCGACATTTGCATTTGAAACAAAGGAATTGCCGAATTCCTCTTAATAGAATGCTGTTGTGGAGTGACAATAGGTTTTACTCTAAATGGAAATGA

Coding sequence (CDS)

ATGGCGGTTGGAGCTGCAACTTCATTCACCACCGTCTCTTCCTTCTCTCCCTCGAACGCTCCCACTCCCAGATCTCGCCTTCATCTTCCTCCTCCATTCATCAACTTTCGCACTCCACATCATCAAAACCTCCGTTACCTCAAATCCCTCCGCATCATCGATTCCCGAACCAGATTCCATTCTCCCGACGCCGTCGATCAAATCCTCACCACCGTCCATTTCCTCAAATCCAAGGGCTTCTCCGACTCCGATTTCCCCAGACTCGCCTTCCTCTGCCCTCAACTCTTCACTCCCAACTTCGATCCCACCGACATTGCCCCCATCTTCCACTTCCTCGCCGCCGATCTATCCGCTTCCGTCCAAGAATCGCGCGGATTAATCCTCCAGTGCCCTAGGATTCTGTTATCCGACGTGGAGTTGTGTCTCCGGCCTACGTATAGATTCCTGAAGCAATTAGGGATTGAGAATCTGAAATCGCCAAGCAATTTGAATTCACACCTGCTGAACACTCGGGTGGAGAAGCTAAGAAGCAAAATGAGATTCTTACAGGAGATCGGATTGTCGCACGAGGAGGCAGCGAAGGTTTGCGGGAGAATGCCGGCGATGTTCGGGTACAGTGTGGAGGAGAATTTGAAGCCAAAATATGAGTATTTGGTGACGGAGATGGAGAGAGATTTGGAGGAATTAAAAGAGTTTCCTCAGTATTTTGGGTTCAGTTTGGAAGGACGAATTATACCTCGACATTTGCATTTGAAACAAAGGAATTGCCGAATTCCTCTTAATAGAATGCTGTTGTGGAGTGACAATAGGTTTTACTCTAAATGGAAATGA

Protein sequence

MAVGAATSFTTVSSFSPSNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRTRFHSPDAVDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRFYSKWK
Homology
[Close]
BLAST of Lsi11G010650 vs. Swiss-Prot
Match: MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33
Identity = 90/237 (37.97%), Postives = 135/237 (56.96%), Query Frame = 1 

Query: 42  QNLRYLKSLRIIDSRTRFHSPDA----VDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFT 101
           + L YL+ L +   +    +P      +  +++    L S G S     R+  + P L T
Sbjct: 35  EKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLT 94

Query: 102 PNFDP-TDIAPIFHFLAADLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIEN 161
              DP ++I P+  FL+ ++S S Q+    I +CPR+L+S V+  LRP   FLK LG   
Sbjct: 95  S--DPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 154

Query: 162 LKSPSNLNSHLLNTRVEK-LRSKMRFLQE-IGLSHEEAAKVCGRMPAMFGYSVEENLKPK 221
             + ++ N+ LL + VE+ L  K+ +L+E +G + EE AK+  R PA+  YSV+ NL PK
Sbjct: 155 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 214

Query: 222 YEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRF 272
            E+ + EM  D++ELK FPQYF FSLE +I PRH  LK+    +PL+ ML  SD +F
Sbjct: 215 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 269

[Close]
BLAST of Lsi11G010650 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.4e-15
Identity = 58/212 (27.36%), Postives = 102/212 (48.11%), Query Frame = 1 

Query: 72  VHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQCP 131
           + FL   G  +S   ++    P LF+ + +   + P   +L  ++     +   ++   P
Sbjct: 259 ISFLMGLGIPNSKIGQIVAATPSLFSYSVE-NSLRPTIRYLIEEVGIKETDVGKVVQLSP 318

Query: 132 RILLSDVELCLRPTYRFL-KQLGIENLKSPSNLNSH--LLNTRVEK-LRSKMRFLQEIGL 191
           +IL+  +++     Y FL K+LG         +  H  LL+  ++     ++ FL+ IG+
Sbjct: 319 QILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGM 378

Query: 192 SHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPR 251
            + +  KV   +  +   S+E+NLKPKY YLV E+  ++  L ++P Y   SL+ RI PR
Sbjct: 379 CNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPR 438

Query: 252 HLHL----KQRNCRIPLNRMLLWSDNRFYSKW 276
           H  L    K R    PL+  L+ +D  F  +W
Sbjct: 439 HRFLVELKKVRKGPFPLS-SLVPNDESFCQQW 468

[Close]
BLAST of Lsi11G010650 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.5e-14
Identity = 59/221 (26.70%), Postives = 105/221 (47.51%), Query Frame = 1 

Query: 52  IIDSRTRFHSPDAVDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHF 111
           I+  R +       D +  T+ FL++ G   + + ++    P + T  +    +     F
Sbjct: 252 ILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT--YSRQKLTSTVEF 311

Query: 112 LAADLSASVQESRGLIL-QCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNT 171
           L+   +   +E  G IL +CP I+   VE  LRPT  + + L ++              +
Sbjct: 312 LSQ--TGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLS 371

Query: 172 RVEKLRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELK 231
               L+    F  E G   +E   +  R  A++ +S++EN+ PK++Y  T M+    EL 
Sbjct: 372 IESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELV 431

Query: 232 EFPQYFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRF 272
           +FPQ+FG+SL+ RI PR+  +++   R+ LN++L  S   F
Sbjct: 432 KFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]
BLAST of Lsi11G010650 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.5e-13
Identity = 56/197 (28.43%), Postives = 98/197 (49.75%), Query Frame = 1 

Query: 79  GFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQCPRILLSDV 138
           G       R+  + P L+  + + T IAP   FL  ++    +    ++++ P +L + +
Sbjct: 399 GIPKEGMKRILVVKPILYCIDLEKT-IAPKVRFLQ-EMGIPNEAIGNMLVKFPSLLTNSL 458

Query: 139 ELCLRPTYRFL-KQLGI--ENLKSPSNLNSHLLNTRV-EKLRSKMRFLQEIGLSHEEAAK 198
              +RP   FL  + G+  +++     ++  LL   +  KL   MR+   +G+   +  +
Sbjct: 459 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 518

Query: 199 VCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQR 258
           +    P +  Y+V +NL+PKY YL   M R L++L EFP++F +SLE RIIPRH  + + 
Sbjct: 519 MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVEN 578

Query: 259 NCRIPLNRMLLWSDNRF 272
                L  ML  +D  F
Sbjct: 579 RVNFKLRYMLACTDEEF 592

[Close]
BLAST of Lsi11G010650 vs. TrEMBL
Match: A0A0A0K870_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075660 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.2e-123
Identity = 226/282 (80.14%), Postives = 242/282 (85.82%), Query Frame = 1 

Query: 1   MAVGAAT---SFTTVSSFSPSNAPTPRSRL---HLPPPFINFRTPHHQNLRYLKSLRIID 60
           MAVG      SF  + SFS    PTP +R    HL PP INFRT HHQN+RYLKSL +ID
Sbjct: 1   MAVGPPVLSHSFLALYSFSHFTTPTPTTRSRHPHLHPPSINFRTSHHQNIRYLKSLNVID 60

Query: 61  SRTRFHSPDAVDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAA 120
            +TRFHSPDAV QILTTVHFLKSKGFSDSDFPRLAFLCP LFT NFD TDIAP+F FLA 
Sbjct: 61  PQTRFHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLAT 120

Query: 121 DLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEK 180
           D+SAS+QESRGLIL+CP+IL SDVELCL+PT+RFLKQLGIENLKSPSNLNSHLLNTRVEK
Sbjct: 121 DISASLQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEK 180

Query: 181 LRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQ 240
           LRSK+RF QEIG SHEEA+KVCGRMPAMFGYSV+ENLKPKYEY V EMERDLEELK FPQ
Sbjct: 181 LRSKIRFFQEIGFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERDLEELKGFPQ 240

Query: 241 YFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRFYSKWK 277
           YFGFSLEGRI+PRHLHLKQR   IPLN MLLWS NRFYSKWK
Sbjct: 241 YFGFSLEGRIMPRHLHLKQRGLHIPLNSMLLWSHNRFYSKWK 282

[Close]
BLAST of Lsi11G010650 vs. TrEMBL
Match: M5VJL2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021045mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 176/264 (66.67%), Postives = 211/264 (79.92%), Query Frame = 1 

Query: 16  SPSNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRT---RFHSPDAVDQILTTV 75
           S S++    S  H P  FI FRT + +NLRYLK+LRII   T   +   PDA DQIL+TV
Sbjct: 12  SSSSSSLTTSNPHPPSHFIKFRTSYRENLRYLKTLRIISPETNPKKLPLPDATDQILSTV 71

Query: 76  HFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQCPR 135
           +FLKSKGFSD DFPRLAFL P+LF+P  DPTDIAP+F FLAA+L A    S GLIL+CP 
Sbjct: 72  NFLKSKGFSDPDFPRLAFLSPKLFSPTLDPTDIAPVFDFLAAELPADPSSSCGLILRCPD 131

Query: 136 ILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGLSHEEA 195
           +L SDVE CLRPT  +LKQLG++ L +P+NLN+HLLNTRVEKL+ KMRFL+ + LS+EEA
Sbjct: 132 LLFSDVEFCLRPTLHYLKQLGLDKLGAPTNLNAHLLNTRVEKLKRKMRFLRSLTLSYEEA 191

Query: 196 AKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLK 255
           A VC R+PA+FGYSVE+NL+PKYEYLV EM R ++ELK+FPQYFGFSLE RI+PRHLHLK
Sbjct: 192 ANVCVRLPAIFGYSVEDNLRPKYEYLVKEMGRSVDELKKFPQYFGFSLEKRIVPRHLHLK 251

Query: 256 QRNCRIPLNRMLLWSDNRFYSKWK 277
           +RN  IPLNRMLLWSD +FY+KWK
Sbjct: 252 ERNVEIPLNRMLLWSDQKFYAKWK 275

[Close]
BLAST of Lsi11G010650 vs. TrEMBL
Match: D7TQ07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02460 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.1e-93
Identity = 171/269 (63.57%), Postives = 216/269 (80.30%), Query Frame = 1 

Query: 11  TVSSFSPSNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRTRFH---SPDAVDQ 70
           T+SS    ++ +  S  H PP  + FRT H +NLRYLK+L IID  T+ H   SP+AVDQ
Sbjct: 9   TISSIKSPSSQSLSSSEH-PPYLLRFRTSHRENLRYLKTLGIIDPSTKPHKFPSPEAVDQ 68

Query: 71  ILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLI 130
           +L+TV+FLKSKGFS+ DFPRL+FLCP+LF+ + DPTDI P+F FL  DL+AS QES  LI
Sbjct: 69  VLSTVNFLKSKGFSEPDFPRLSFLCPKLFSSDSDPTDIEPVFDFLTLDLAASDQESCSLI 128

Query: 131 LQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGL 190
           L+CP+ILLSDVE CLRPT  +L++LG+E L  P++LN+HLLNTRVE+L +K+RFL+ +GL
Sbjct: 129 LRCPQILLSDVEYCLRPTLLYLRKLGVEKLNVPTSLNAHLLNTRVERLVAKIRFLRSVGL 188

Query: 191 SHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPR 250
           S+EE+A+ CGR PA+FGYS+E NLKPK+ YLV EM+R +EELK FPQYF FSLE RI+PR
Sbjct: 189 SYEESARACGRFPAVFGYSIENNLKPKFNYLVREMKRSVEELKVFPQYFAFSLENRIMPR 248

Query: 251 HLHLKQRNCRIPLNRMLLWSDNRFYSKWK 277
           HLHL+QRN RI L RMLLWSD +FY+KWK
Sbjct: 249 HLHLEQRNVRISLKRMLLWSDQKFYAKWK 276

[Close]
BLAST of Lsi11G010650 vs. TrEMBL
Match: W9R114_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026956 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.6e-90
Identity = 168/271 (61.99%), Postives = 214/271 (78.97%), Query Frame = 1 

Query: 10  TTVSSFSP-SNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRII---DSRTRFHSPDAV 69
           ++VSS +P S++ +P +    P  FI FRT H +NLRYLK+L I+   D       PD V
Sbjct: 20  SSVSSINPHSSSSSPPT--FTPSRFIKFRTSHRENLRYLKTLGIVTADDKPKNLPLPDDV 79

Query: 70  DQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRG 129
           ++IL  V FLKSKGFS++DFPRLAFL P LF+P FDP  IAP+F FLA+D++A  +ES  
Sbjct: 80  ERILAAVDFLKSKGFSNADFPRLAFLSPNLFSPGFDPAGIAPVFDFLASDVAALPEESCR 139

Query: 130 LILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEI 189
           LIL+CP +L S+VE CLRPT  +L++LG+E L SP+ LN+HLLNTRVEKL+ KM+FL+ I
Sbjct: 140 LILRCPALLFSNVEYCLRPTLDYLRKLGLERLNSPTTLNAHLLNTRVEKLQKKMKFLRSI 199

Query: 190 GLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRII 249
           GLS++E+A++C R+PA+FGYSVE+NL+PKYEYLV EMER L+ELK FPQYF FSL+ RI+
Sbjct: 200 GLSYDESARICARIPAIFGYSVEDNLRPKYEYLVWEMERSLDELKRFPQYFAFSLKKRIV 259

Query: 250 PRHLHLKQRNCRIPLNRMLLWSDNRFYSKWK 277
           PRHLHLKQRN RIPLNRMLLW D +FY+KWK
Sbjct: 260 PRHLHLKQRNVRIPLNRMLLWGDQKFYAKWK 288

[Close]
BLAST of Lsi11G010650 vs. TrEMBL
Match: A0A059BAH6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00475 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-89
Identity = 156/249 (62.65%), Postives = 200/249 (80.32%), Query Frame = 1 

Query: 31  PPFINFRTPHHQNLRYLKSLRIIDSRTRFH---SPDAVDQILTTVHFLKSKGFSDSDFPR 90
           P ++ FRT H +N+RYL++L +ID  +R     SPD +D++L  V+FLKSKGFS+SDFPR
Sbjct: 34  PLYLRFRTSHVENVRYLRTLGVIDPVSRHRKLPSPDTIDRVLNIVNFLKSKGFSESDFPR 93

Query: 91  LAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQCPRILLSDVELCLRPTYR 150
           LA+LCP LF    DPTDIAP+F FL  ++SAS QES  LI +CP+IL SDVE CL+PT  
Sbjct: 94  LAYLCPGLFASELDPTDIAPVFEFLTVEVSASAQESCSLINKCPQILFSDVEYCLKPTLN 153

Query: 151 FLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSV 210
           +L+QLGI  L  PS LN+HLLNTRVEKL  K++FL+ IGL+H+E A++C R+P++FGYS+
Sbjct: 154 YLRQLGIGRLNFPSTLNAHLLNTRVEKLHGKVKFLRSIGLTHQEIARICARLPSIFGYSI 213

Query: 211 EENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWS 270
           + NL+PKY+YLV +MER+LEELK+FPQYF FSLE RI PRHLHLK+RN +IPLNRMLLW 
Sbjct: 214 DNNLRPKYDYLVEDMERNLEELKKFPQYFAFSLEKRIAPRHLHLKRRNVKIPLNRMLLWG 273

Query: 271 DNRFYSKWK 277
           D +FY+KWK
Sbjct: 274 DEKFYAKWK 282

[Close]
BLAST of Lsi11G010650 vs. TAIR10
Match: AT3G18870.1 (AT3G18870.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 321.2 bits (822), Expect = 6.1e-88
Identity = 158/266 (59.40%), Postives = 201/266 (75.56%), Query Frame = 1 

Query: 12  VSSFSPSNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRTRFHSP-DAVDQILT 71
           +SSFS  + P+P S     P ++ F+T H +NLR+L SL I+    R   P + +  IL+
Sbjct: 13  LSSFS--SPPSPSSS---KPLYLKFQTSHRENLRHLSSLGIVPQNPRLAPPANDLSVILS 72

Query: 72  TVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQC 131
            V+ LKSKG SD DFPRL FLCPQLF+P FD + + P+F FL  +L AS +ESRGLI+ C
Sbjct: 73  AVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNC 132

Query: 132 PRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGLSHE 191
           P IL SDVE CLRPT  +LK+LG+ NL   S  N+H+LNTRVEKLR+KMRFL+ IG  HE
Sbjct: 133 PNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHE 192

Query: 192 EAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLH 251
           EAA+VCGR+PA+FGYSVE+NL+PK+E+LV +MER+LEELK+FPQYF FSL  RI PRH H
Sbjct: 193 EAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWH 252

Query: 252 LKQRNCRIPLNRMLLWSDNRFYSKWK 277
           LK++N R+ L+RML+W D +FYSKWK
Sbjct: 253 LKKKNVRVSLSRMLMWGDQKFYSKWK 273

[Close]
BLAST of Lsi11G010650 vs. TAIR10
Match: AT2G34620.1 (AT2G34620.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-41
Identity = 89/208 (42.79%), Postives = 134/208 (64.42%), Query Frame = 1 

Query: 65  VDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESR 124
           +D I + +HFL+SKG   +D PR+  +CP++ T +   T++ P+F FL+ DL       R
Sbjct: 84  LDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVR-TELYPVFMFLSNDLHVPENAFR 143

Query: 125 GLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEK-LRSKMRFLQ 184
            +I +CPR+L+S VE  L+P   +L++LG+++L++ +  +  LL + VE  L  K+RFL+
Sbjct: 144 RVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRFLE 203

Query: 185 EIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGR 244
            IG S  EA  +  R PA+F +S+E N KPK +Y ++E++  LE LKEFPQYF FSLE R
Sbjct: 204 SIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKR 263

Query: 245 IIPRHLHLKQRNCRIPLNRMLLWSDNRF 272
           I PRHL   +R   +PL+ ML  +D  F
Sbjct: 264 IKPRHLESMERGLELPLSLMLKSTDEEF 290

[Close]
BLAST of Lsi11G010650 vs. TAIR10
Match: AT2G03050.1 (AT2G03050.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 145.2 bits (365), Expect = 6.0e-35
Identity = 90/237 (37.97%), Postives = 135/237 (56.96%), Query Frame = 1 

Query: 42  QNLRYLKSLRIIDSRTRFHSPDA----VDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFT 101
           + L YL+ L +   +    +P      +  +++    L S G S     R+  + P L T
Sbjct: 34  EKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLT 93

Query: 102 PNFDP-TDIAPIFHFLAADLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIEN 161
              DP ++I P+  FL+ ++S S Q+    I +CPR+L+S V+  LRP   FLK LG   
Sbjct: 94  S--DPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 153

Query: 162 LKSPSNLNSHLLNTRVEK-LRSKMRFLQE-IGLSHEEAAKVCGRMPAMFGYSVEENLKPK 221
             + ++ N+ LL + VE+ L  K+ +L+E +G + EE AK+  R PA+  YSV+ NL PK
Sbjct: 154 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 213

Query: 222 YEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRF 272
            E+ + EM  D++ELK FPQYF FSLE +I PRH  LK+    +PL+ ML  SD +F
Sbjct: 214 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268

[Close]
BLAST of Lsi11G010650 vs. TAIR10
Match: AT2G36000.1 (AT2G36000.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 91/274 (33.21%), Postives = 142/274 (51.82%), Query Frame = 1 

Query: 7   TSFTTVSSFSPSNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRTRF--HSP-- 66
           TS ++ S F   + P+  S            +  H+ L YL SL I D  T    H P  
Sbjct: 40  TSSSSSSFFKSPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGI-DFLTLINRHPPLL 99

Query: 67  -DAVDQILTTVHFLKSK--GFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSA- 126
             A+  + + V ++ +    F+  DF RL  +CP+L T       I P+  FL  ++   
Sbjct: 100 STALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTI-PVITFLLREVGVD 159

Query: 127 SVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVE-KLRS 186
           S+ + R  + + PR+L   V+  LRPT  FL+++GI +     + +++LL+  V+ KL  
Sbjct: 160 SIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILD----PHKHTYLLSCSVDNKLVP 219

Query: 187 KMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFG 246
           ++ + +++G S   A  +  R P +F YS+ EN +PK +YL+ EM RD+ E+ EFPQYF 
Sbjct: 220 RIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFS 279

Query: 247 FSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRF 272
           FSLE RI PRH     +  R PL  ML  ++  F
Sbjct: 280 FSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]
BLAST of Lsi11G010650 vs. TAIR10
Match: AT1G78930.1 (AT1G78930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 54/173 (31.21%), Postives = 90/173 (52.02%), Query Frame = 1 

Query: 102 PTDIAPIFHFLAADLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPS 161
           P +   +  FL  DL    +    ++ +CP I    +E  L+    FL + G+     P 
Sbjct: 403 PQEFLKVVCFLE-DLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPR 462

Query: 162 NLNSH---LLNTRVEKLRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYL 221
            +  +   L+    + +  ++++L EIG+S  E A +  +   + GYS+++ L+PK+E+L
Sbjct: 463 IIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFL 522

Query: 222 VTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRF 272
           V  ME+ + E+ E+P+YF +SLE RI PR   LK RN    L  ML  +D  F
Sbjct: 523 VNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]
BLAST of Lsi11G010650 vs. NCBI nr
Match: gi|659109777|ref|XP_008454873.1| (PREDICTED: uncharacterized protein LOC103495186 [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 1.9e-123
Identity = 228/282 (80.85%), Postives = 245/282 (86.88%), Query Frame = 1 

Query: 1   MAVGAAT---SFTTVSSFSPSNAPTPRSRL---HLPPPFINFRTPHHQNLRYLKSLRIID 60
           MAVGA     SF  VSSFS    PTP +R    HL PP INFRT H QNLRYLKSL IID
Sbjct: 1   MAVGAPVLSHSFPIVSSFSHFTTPTPTTRSRHPHLHPPSINFRTSHQQNLRYLKSLNIID 60

Query: 61  SRTRFHSPDAVDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAA 120
            +TRF SPDAVDQILTTVHFLKSKGFSDSDFPRLAF CP LFT NFD TDIAP+FHFLAA
Sbjct: 61  PQTRFRSPDAVDQILTTVHFLKSKGFSDSDFPRLAFFCPNLFTSNFDTTDIAPVFHFLAA 120

Query: 121 DLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEK 180
           D+SAS+QESRGLIL+CP+IL SDVELCL+PT+RFLKQLGIENLKSPSNLNSHLLNTRVEK
Sbjct: 121 DISASIQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEK 180

Query: 181 LRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQ 240
           LR+K+RFLQEIG S+EEA+KVCGRMPA+FGYSV+ENL+PKYEYLV  MERDLEELK FPQ
Sbjct: 181 LRNKIRFLQEIGFSYEEASKVCGRMPAIFGYSVKENLRPKYEYLVKVMERDLEELKGFPQ 240

Query: 241 YFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRFYSKWK 277
           YFGFSLEGRI+PRHLHLKQR   IPLN MLLWS NRFYSKWK
Sbjct: 241 YFGFSLEGRIMPRHLHLKQRGLHIPLNSMLLWSHNRFYSKWK 282

[Close]
BLAST of Lsi11G010650 vs. NCBI nr
Match: gi|778725293|ref|XP_011658929.1| (PREDICTED: uncharacterized protein LOC101203623 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 3.2e-123
Identity = 226/282 (80.14%), Postives = 242/282 (85.82%), Query Frame = 1 

Query: 1   MAVGAAT---SFTTVSSFSPSNAPTPRSRL---HLPPPFINFRTPHHQNLRYLKSLRIID 60
           MAVG      SF  + SFS    PTP +R    HL PP INFRT HHQN+RYLKSL +ID
Sbjct: 1   MAVGPPVLSHSFLALYSFSHFTTPTPTTRSRHPHLHPPSINFRTSHHQNIRYLKSLNVID 60

Query: 61  SRTRFHSPDAVDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAA 120
            +TRFHSPDAV QILTTVHFLKSKGFSDSDFPRLAFLCP LFT NFD TDIAP+F FLA 
Sbjct: 61  PQTRFHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLAT 120

Query: 121 DLSASVQESRGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEK 180
           D+SAS+QESRGLIL+CP+IL SDVELCL+PT+RFLKQLGIENLKSPSNLNSHLLNTRVEK
Sbjct: 121 DISASLQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEK 180

Query: 181 LRSKMRFLQEIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQ 240
           LRSK+RF QEIG SHEEA+KVCGRMPAMFGYSV+ENLKPKYEY V EMERDLEELK FPQ
Sbjct: 181 LRSKIRFFQEIGFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERDLEELKGFPQ 240

Query: 241 YFGFSLEGRIIPRHLHLKQRNCRIPLNRMLLWSDNRFYSKWK 277
           YFGFSLEGRI+PRHLHLKQR   IPLN MLLWS NRFYSKWK
Sbjct: 241 YFGFSLEGRIMPRHLHLKQRGLHIPLNSMLLWSHNRFYSKWK 282

[Close]
BLAST of Lsi11G010650 vs. NCBI nr
Match: gi|1009165028|ref|XP_015900819.1| (PREDICTED: uncharacterized protein LOC107433934 [Ziziphus jujuba])

HSP 1 Score: 369.0 bits (946), Expect = 7.2e-99
Identity = 185/273 (67.77%), Postives = 225/273 (82.42%), Query Frame = 1 

Query: 8   SFTTVSSFSPSNAP-TPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRTRFHS---PD 67
           S ++ SSF+ +  P T     + PP FI FRT H +NLRYLK+L +ID +T+ ++   PD
Sbjct: 11  SSSSSSSFTKTTKPKTLYPTPNQPPHFIKFRTSHRENLRYLKTLGVIDPQTKPNNLPLPD 70

Query: 68  AVDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQES 127
            VDQIL TV FLKSKGFSDSDFPRLAFL P+LF+ N DPTDIAP+F FLAADLSASV+++
Sbjct: 71  DVDQILLTVDFLKSKGFSDSDFPRLAFLSPELFSSNLDPTDIAPVFDFLAADLSASVEDT 130

Query: 128 RGLILQCPRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQ 187
           R LILQCP IL SDVE CLRPT  +L++LG+E L  P++LN+HLLNTRVEKLR K+ FL+
Sbjct: 131 RRLILQCPPILFSDVEYCLRPTLHYLRKLGLERLDRPTSLNAHLLNTRVEKLRMKIGFLR 190

Query: 188 EIGLSHEEAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGR 247
            IGLS++E+++VC R+PA+FGYS+EENLKPKYEYLV EMER+LEELK+FPQYF FSLE +
Sbjct: 191 RIGLSYDESSRVCARVPAIFGYSIEENLKPKYEYLVMEMERNLEELKKFPQYFAFSLEKK 250

Query: 248 IIPRHLHLKQRNCRIPLNRMLLWSDNRFYSKWK 277
           I PRHLHLKQRN RIPLNRML+WSD RFY+KWK
Sbjct: 251 IKPRHLHLKQRNVRIPLNRMLIWSDQRFYAKWK 283

[Close]
BLAST of Lsi11G010650 vs. NCBI nr
Match: gi|1009164985|ref|XP_015900794.1| (PREDICTED: uncharacterized protein LOC107433911 [Ziziphus jujuba])

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 181/259 (69.88%), Postives = 217/259 (83.78%), Query Frame = 1 

Query: 21  PTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRTRFHS---PDAVDQILTTVHFLKS 80
           PTP      PP FI FRT H +NLRYLK+L +ID +T+ ++   PD VDQIL TV FLKS
Sbjct: 30  PTPNQ----PPHFIKFRTSHRENLRYLKTLGVIDPQTKPNNLPLPDDVDQILLTVDFLKS 89

Query: 81  KGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQCPRILLSD 140
           KGFSDSDFPRLAFL P+LF+ N DPTDIAP+F FLAADLSASV+++R LILQCP IL SD
Sbjct: 90  KGFSDSDFPRLAFLSPELFSSNLDPTDIAPVFDFLAADLSASVEDTRRLILQCPPILFSD 149

Query: 141 VELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGLSHEEAAKVCG 200
           VE CLRPT  +L++LG+E L  P++LN+HLLNTRVEKLR K+ FL+ IGLS++E+++VC 
Sbjct: 150 VEYCLRPTLHYLRKLGLERLDRPTSLNAHLLNTRVEKLRMKIGFLRRIGLSYDESSRVCA 209

Query: 201 RMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLHLKQRNCR 260
           R+PA+FGYS+EENLKPKYEYLV EMER+LEELK+FPQYF FSLE +I PRHLHLKQR+ R
Sbjct: 210 RVPAIFGYSIEENLKPKYEYLVMEMERNLEELKKFPQYFAFSLEKKIKPRHLHLKQRSVR 269

Query: 261 IPLNRMLLWSDNRFYSKWK 277
           IPLNRML+WSD RFY+KWK
Sbjct: 270 IPLNRMLIWSDQRFYAKWK 284

[Close]
BLAST of Lsi11G010650 vs. NCBI nr
Match: gi|658042746|ref|XP_008356998.1| (PREDICTED: uncharacterized protein LOC103420736 [Malus domestica])

HSP 1 Score: 362.8 bits (930), Expect = 5.2e-97
Identity = 180/266 (67.67%), Postives = 213/266 (80.08%), Query Frame = 1 

Query: 14  SFSPSNAPTPRSRLHLPPPFINFRTPHHQNLRYLKSLRIIDSRT---RFHSPDAVDQILT 73
           S S S+  T     H P  FI FRT + +NLRYLK+LRII   T   +   PDA DQIL 
Sbjct: 16  SSSSSSIATLNPNPHPPSHFIKFRTSYRENLRYLKTLRIISPETSPKKLPLPDATDQILA 75

Query: 74  TVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPIFHFLAADLSASVQESRGLILQC 133
           TV FLKSKGF+DSDFPRLAFL P+LF+P+ DPTDIAP+F FLA+DLSA    S GLIL+C
Sbjct: 76  TVGFLKSKGFTDSDFPRLAFLSPKLFSPSLDPTDIAPVFDFLASDLSADPAFSCGLILRC 135

Query: 134 PRILLSDVELCLRPTYRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKMRFLQEIGLSHE 193
           P +L +DVE CLRPT  +L+QLGI+  KSPSNLN+HLLNTRVEKL+ KMRFL+ +GLS+E
Sbjct: 136 PDLLFADVEFCLRPTLHYLEQLGIDKPKSPSNLNAHLLNTRVEKLKKKMRFLRSLGLSYE 195

Query: 194 EAAKVCGRMPAMFGYSVEENLKPKYEYLVTEMERDLEELKEFPQYFGFSLEGRIIPRHLH 253
           EAA VC R+PA+FGYSVE+NL+PKYEYLV +M R +EELK+FPQYFGFSLE RI+PRHLH
Sbjct: 196 EAANVCARLPAIFGYSVEDNLRPKYEYLVKDMGRSVEELKKFPQYFGFSLEKRIVPRHLH 255

Query: 254 LKQRNCRIPLNRMLLWSDNRFYSKWK 277
           LK+RN  IPLNRMLLWSD +FY+KWK
Sbjct: 256 LKERNVEIPLNRMLLWSDQKFYTKWK 281

The following BLAST results are available for this feature:
BLAST of Lsi11G010650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF1_ARATH1.1e-3337.97Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN... [more]
MTEF9_ARATH6.4e-1527.36Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF5_ARATH5.5e-1426.70Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF2_ARATH3.5e-1328.43Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of Lsi11G010650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K870_CUCSA2.2e-12380.14Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075660 PE=4 SV=1[more]
M5VJL2_PRUPE1.5e-9566.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021045mg PE=4 SV=1[more]
D7TQ07_VITVI4.1e-9363.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02460 PE=4 SV=... [more]
W9R114_9ROSA5.6e-9061.99Uncharacterized protein OS=Morus notabilis GN=L484_026956 PE=4 SV=1[more]
A0A059BAH6_EUCGR2.1e-8962.65Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00475 PE=4 SV=1[more]
BLAST of Lsi11G010650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18870.16.1e-8859.40 Mitochondrial transcription termination factor family protein[more]
AT2G34620.13.3e-4142.79 Mitochondrial transcription termination factor family protein[more]
AT2G03050.16.0e-3537.97 Mitochondrial transcription termination factor family protein[more]
AT2G36000.11.2e-2733.21 Mitochondrial transcription termination factor family protein[more]
AT1G78930.11.3e-1831.21 Mitochondrial transcription termination factor family protein[more]
BLAST of Lsi11G010650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109777|ref|XP_008454873.1|1.9e-12380.85PREDICTED: uncharacterized protein LOC103495186 [Cucumis melo][more]
gi|778725293|ref|XP_011658929.1|3.2e-12380.14PREDICTED: uncharacterized protein LOC101203623 [Cucumis sativus][more]
gi|1009165028|ref|XP_015900819.1|7.2e-9967.77PREDICTED: uncharacterized protein LOC107433934 [Ziziphus jujuba][more]
gi|1009164985|ref|XP_015900794.1|1.2e-9869.88PREDICTED: uncharacterized protein LOC107433911 [Ziziphus jujuba][more]
gi|658042746|ref|XP_008356998.1|5.2e-9767.67PREDICTED: uncharacterized protein LOC103420736 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0016556 mRNA modification
biological_process GO:0071472 cellular response to salt stress
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0042646 plastid nucleoid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G010650.1Lsi11G010650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 117..271
score: 1.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 160..188
score: 170.0coord: 50..81
score: 9.6coord: 193..225
score: 1.8E-5coord: 124..155
score: 0.0025coord: 226..257
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 30..275
score: 2.1E
NoneNo IPR availablePANTHERPTHR13068:SF19SUBFAMILY NOT NAMEDcoord: 30..275
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G010650Csa7G075660Cucumber (Chinese Long) v2culsiB495
Lsi11G010650CSPI07G08120Wild cucumber (PI 183967)cpilsiB507
Lsi11G010650Cucsa.220350Cucumber (Gy14) v1cgylsiB361
Lsi11G010650Cla015959Watermelon (97103) v1lsiwmB106
Lsi11G010650ClCG02G005300Watermelon (Charleston Gray)lsiwcgB097
Lsi11G010650Cla97C02G032320Watermelon (97103) v2lsiwmbB086
Lsi11G010650Bhi05G001050Wax gourdlsiwgoB115
Lsi11G010650CsGy7G007670Cucumber (Gy14) v2cgyblsiB463
Lsi11G010650CsaV3_7G010220Cucumber (Chinese Long) v3cuclsiB530
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G010650Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi11G010650Cucumber (Gy14) v1cgylsiB146
Lsi11G010650Cucurbita maxima (Rimu)cmalsiB092
Lsi11G010650Cucurbita maxima (Rimu)cmalsiB472
Lsi11G010650Cucurbita maxima (Rimu)cmalsiB562
Lsi11G010650Cucurbita maxima (Rimu)cmalsiB784
Lsi11G010650Cucurbita moschata (Rifu)cmolsiB089
Lsi11G010650Cucurbita moschata (Rifu)cmolsiB457
Lsi11G010650Cucurbita moschata (Rifu)cmolsiB545
Lsi11G010650Cucurbita pepo (Zucchini)cpelsiB199
Lsi11G010650Cucurbita pepo (Zucchini)cpelsiB533
Lsi11G010650Cucurbita pepo (Zucchini)cpelsiB605
Lsi11G010650Wild cucumber (PI 183967)cpilsiB097
Lsi11G010650Wild cucumber (PI 183967)cpilsiB435
Lsi11G010650Cucumber (Chinese Long) v2culsiB102
Lsi11G010650Melon (DHL92) v3.5.1lsimeB120
Lsi11G010650Watermelon (Charleston Gray)lsiwcgB090
Lsi11G010650Cucumber (Gy14) v2cgyblsiB090
Lsi11G010650Melon (DHL92) v3.6.1lsimedB127
Lsi11G010650Silver-seed gourdcarlsiB186
Lsi11G010650Silver-seed gourdcarlsiB599
Lsi11G010650Silver-seed gourdcarlsiB809
Lsi11G010650Cucumber (Chinese Long) v3cuclsiB109
Lsi11G010650Wax gourdlsiwgoB128