Lsi11G010040 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G010040
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionATP-dependent RNA helicase-like protein
Locationchr11 : 16958947 .. 16971252 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGTATTGGTCGACCATTTTAGTAGGTGCCAATAGTAGTCATGGCATGCCCTCATTATTAGTATACCACCGTTTTTTGTTCTAGTTTTATTTCTGAAGTTTTTTTATTTCTATTTCATATTTCAAGTATTTGAATATTCCATAGTCTTGAGAGCATGATATTATGGTATTGTTTGAATATTACTGGTCAGAGCAAAATGTATAATCTATTGATGTACACTTTTTTTTTTTCCTTCTAATAATCATTTTGTCCTTATTTAGGGTTCCCATCTTGTTTTCATATTTTTCTCTCTCTTTTTCTCTTTTCATCTCCTGCACTTTCTTGATTGTTTGCTCCTCTTGGGATATAGCGATGGCTATTGACTCTAAAAACCCACAGAATTACTAAGAAAAATCGTTGGATTTATAAATTCTTGTTTTGGTATCTATTCTTATTCAGTTTTTGTAATGCATGTGCATTTCTTCAATGTTGTGTAAGTTTGGTTTGAGGGACTTGAGTTGGTAAGAGTGTTAGATGATATAAGATTAAATTTGCCTTCACCCATTAGCTTAAGCTTTTGGGTCAATTGGCGATTTAACATGGTATTAGAGCAGGTGGTCCAGGGAGGTCTTGTGTTCAAGCCCTACATTGTTGTTACCTCCTCAATTAATATTGATTTACACTTGTTGGGTCTTCTTCATATTTCAAGCTCACAAGTGAGGGGGAGTGCTAGATGATATAAGATTAAATTTGCCTTCACCCATTAGCTTAAGTTTTTGGATCAATTGGCGATTTAATAAAGAGGCTTTCTTTTGGATGTTGGATTGCATTTAGAAATCTCGGCAGTGAAATTTTGGTTCTTATGCAGGGGGACAAATGGATGGTTGTAGTAGCTGACTCAAAACTAACCCCATGGGCTAAGCATTGTAGTAAAGACCTTAGATTCAATTAAGTGGTCGTGGTTTAAAGTATCCTGAGTCACATATCTTGGATATTAGATGTCCTATAAGTCTCTAGTTTATCAAATAATAGAGTTAGGTGGCGGTCCTTGCTTTAGAATCTAATGCATCCGGAATTAACTCAATATCGTAAAAGTTGAGAAACTTGAGTTGGTAGAAACGTGCTTTTGGTTTTAGAGTTATAAGCAGTGAATTTTCTATCCATTTGTGCAAAGGAAAATGATTGTAGTAGCTAACTCAAAACTTATCCCAATGCCTCTAGATTTAAAGTATTCATGGGTTCATAATAACCCCTGTTACATATGTTAGGTTAAATTTGTAGACTACTGAATAACAGGTCACTTTTGGTTTGAAACCAATTTTCTTGATGAGTATGATGCCAATGGCTGAGATGTAATTGAAAGCTTCGACATGTTAGTTGACAAAGTAACTTTGTTGCAGAAACTAAGGATCCACAAGATTCAAGGGTGATCATATTCTCAAATTTCAGGGGAAGTGTAAGGTGAAATATTTTCTCCAAGTTCAATTTTGTAGTGTTCGATGATTTAGAAGTGCACACATTCCAATCAATTATTCATCCTTAAACTTGCCTCAATGTGGTAATAATACTTAGGGACATTATGGGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGTTTGCAATTTCATTTTTCTTCATTTTTTGTTATTATTTAAGTTAATGATGCAGTATCTTTTGGGATAATCTTGTCTTTCTTGGTCCTAATCTTGTAGTTATTGACCTTTCTTGGATTAATCTTTCTTCTTTTAAGTTGTATTTTTAAGCAGCTTGTCTTTTCACCTATGACCTCCCGGTAAAAGTTATTGTATTTTCTTTAAGTTAGATTCTCTTTACTTTTACCCTGCCGCTAAAAGGGTAATTTAGGTTGTAACTTTTGTCTTCCAGCTTATAAATAAGGCCAAAGGCTGTCTTTTAAGGCTAATGAGAAAATCAGTATTCTTTTGAGAACTTATGTACATCAGTTAATTACTAGTTTAGCCCCAAAACTTTCAAAATTGTGTTTTTATAGTGTATGAAACTTATAGACTTACATTGAAAGTTTAGAGGCTTATGATAACTTTTTAAATTCTGGGACCTTCTGTTAGACAATCCTAAAACTTGAACTATGACACTTGTAGTTTAACCTATTATTTATTATTTATTATGTGAAAACTGTTATTTTCTTGTCTTTATCTCAATGTCTCTGCATTTCTTTTGTGGTTACAGTCGATTTTTTCTTTTCTTTTAATTCTTCATAGAAGGTGGGAGTTAATCTTTGGTTTAGCATGTTGATATAATATTAAATTTATCATAACCCATCAGCTTAAGCTTTTGGGTTTATTGGTGATTTCACGATATTGGATATGACCATCTTTTTGCACATAAGCACATGTGAGATGATTATATTGTAGAGCATGCTCTTTGGACTATTTAATTTGATCTGGATAGTTTTCCTGTTGAAAAGCCAATAGGAAAAGTTTGTCAATTGAAATTGTGTTTAAGTATATCTAAAATGCTCCAGTTATGTTCTGTTTGCAATTTATTAGAGCTTGGACTTCTTGTATTTGTTGGGACATATTTTTTATGTTGGACAAGCTACTAAGTCCGGAGAATTGCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAAGCTGTTTTGGAGGTAGGCAATCGGGGTTTGCAGGTACTATCCCTATTCTCTATTAGTTACCTGTACTGAATTATATACTTTTGCACAGAAATTTCGTGCTGGCGGGTACAATGTCATTGTTGCCACATGCATTGGGGAAGAAGGTCTTGATATAATGGAAGTTGATCTTGTCATCTGTTTTGATGCAAACGTTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACTGGAAGGAAGCATGATGGACGAGTGGATATCCTTGAACATTCGATTATCAATTAATCTCATTTATTGAATTCCAAATTTGTTATATCTAACATTGTTTTTTGTCAGTTTAGCAAGATATCGTGCCTACTTGTTTGTTAATTGTTTTTAAAAAAAAAAAAATCTTGAAAACACTTAACCCAATAAACACAGATATAGATGTGATGATGTGCATTTTCTTAATTATTAAGACTGATACAACAAGATACAATTATTAAAATGTAGACTTATAATATAATATTTGAAAATGCACACCTTTTATTAATTTTCCCTTAATAAGTTTATTTTATTCTATGATATGTCAGCTCATTTCCTGTGTTTTAAACAAGAAACAACTTCTCAAAAATGAAATTGTTTGAAGGTTACAAACTCCCAAAGGCATTGAAAATTAAAAGGGGAAAAAAAAAATTCAAAATAGGAATTTAAAAACAATTACAATCAAATGAAGCTGACCAATGAACAATAAAGATCAAATAAACCAATGTAACAAAGAACAACGAAACAAAGAGAACGGAAGATGGAAACAAAAGAGAAAAATTGCATGGAGGATCAAGTGCTTCAATTGAGTTCTATATATCATTAAAGTGGAAACAATACAAGTATTTATAAGCAAATAATAAAACTAACCACTAATGCACTGACCTTAAAAATCTACCACTAACCTTGAAATTCTCATCCATTAATCCCACTAAGCCATTAGGCCACTATCCTCTATTAACCCACTAACACAAAAAGAAACAAAACTAATTTAATTACTTGCAAACCAAGTTTACACTAATTCTTAACAAGCTCAACTTAGAAAAAAACTTGAAAGGCAACCACAGCGGCTGAAAACATAAACAAGAACCAAGACTAATGAAACTTTCTGAATTTCCTTTTTCAAAAAAGATCTAGGGAGTTGACAAAAAACCACATAGGCAACCTTCACATCAGCCGCATCAAATTGTTCTGTGATTTTTATACCATGCAAAACTGTAAAAGTAGTATCAATGAAATGATAATCAGAGCAAAGGTGATGTTGATGTAATAGGTTTTGGATAATTTGGTCAATTCAAGCTAATCTTGGTAAATCCTTGATTAATTACATTTTAACTACCAAATTAGGTTTTTAACCTTTTTTAGTTATCTTTTAGGACACTTGTAATTCTCTATAAATAGAGAGTTCCCCATTGTATTTGATATATTCTCATTAATAAAAGACTTTGGTTTGGATTCTTGAAGATTTCTCTCGTTTTAATACTTAGGCTACATCAGATGTGGATGTGGCTCTCTCTTTTCTGGTCTCCTATCATTCCTCTCCTCTCCTTTCTCCGGCTAGTTTTCCTCCCTGTTTAACTTCCCTTCTCGTCGAGCTTCCTTCTCCCGTAAGTTTTCATATTCATTTAGCAGCCCAATCCCTCCAAAGTTTTGTCTTTAGACTCCATAGATAATTTTTGATTGCTGAATATGGATAGGAAAAGTTGCATATTAGGAATTCATTTATATTTTTTTTTGAAATGGAAACAAAACTTTTTCATTGATATAATGAAAAGAGCCAAAAGCTCAGAGTACAATGAAACAAATAGAGAAAGAATACAACATAGAAATCGGAATAACAAAAATGAAAAGACTAATCCTTAGAATCAAAAGAAACTGAAATACAAGCATCCAAAGAACAAAAAATCCAAAACGAACAAAACAACTGGCGAAGAACGAAGCTTGAGCCAACAGAAACAAAGAACTTTGAAAGTAGATGAAAGGATGATGCTTGAAACTGAGAACATAATCAAAATGATTAGAAAGATGCCGACGCAGACGCCTCCCCTTAAACAATATAGGCCCTTCAAAAAGCACAACCAACCGGGCCCTCCAATCTGAATTTTCTGAAAGACGTGTTGAGACCACTCAAACTCGACTTTGAGCAGAGAAAAAAACGGATTTGTTTTGGAAGTCACGACCCTTAAAAGAAAGATTTCTCTTTCTTTATTTTCCTTGAAATGGTTTGAAGTGGGATTAGTGGAATTGTTGCAGTCTCTTATTAAGGACTTCTTTCAAAAGAAAGAGAAAAATGACTGTGAAGTGATTTGGTTAGCAAAATTTTGAAATCAGAGTGGCTGGTTTTTTGAGTGTGCGTTATGGCCAGCTACTGGTGGGAGGAATAATCTTCATGTTCCAGCTAGTTTTCATATTAGGGGAGCTTTTGGGCTTGCTTGGATCTGTATTTTCGGCTAGCTATTATTGTTATTATTATTTCTTCACTTGGAGATGATGAGAGTGCTAAGGAGTGGCTGGTTTTTTGAGTGTGCGTTATGGCCAGCTACTGGTGGGAGGAATAATCTTCATGTTCCAGCTAGTTTTCATATTAGGGGAGCTTTTGGGCTTGCTTGGATCTGTATTTTCGGCTAGCTATTATTGTTATTATTATTTCTTCACTTGGAGATGATGAGAGTGCTAAGGAGGTGTCGACATAGTTGAGATGTCCGGGTGCACTCACTGATTCTATATTTGTATTTCTAGTGATCTTTGTATCTATCTTTGTACTTTGAGCAATAGTCTCAATTCATTAATTCAATAAAGAGATTTGTTTCCTTTTTCAAAAAATATATAAGAGAGGTTGGCTAGTTTTTTGGGAGATGATCAAAGATTTTCTCGTAAATTTTGAAATCCTTTAGGTTTGACCTAGTTACAAGATTTTAGAGACATTTAGGTCTGATGCTGAGTTGAATGCTGCAAAAATGGTTAAGAGAAGTTATGTGGGTGTCATTTACAGAACCCTTCCCCTCCTTCAATTTTGATTCATCATCTTTAAACGCTACGGTTGTTGGGTTTGAAATTAAAAAATTTCCCATTTGGGTTTGAAAAGGAAAAAGAGGTGGTGGACTTACAACTTGATTCTGTTTTGGTGGTCACTGGATTGCTAGCACATTATTCATCAATGAAAGGTCTTGTTCTTTTAAAAAAAAATATAAAATAATAATTCTCGCACTCTCTTTTCATTACTCACGACAGAGGAGAGAGTGCTTTAAATCTAATCAAGAGTGGAAAGATGAAGAGTCTTTAGTTGGAATTAGCATATTGGCAATAGATGGAGTTATTACTTTGGAAGCCCGGTTGAAGAACCTGTCTCTTCTCACTTACTCAAAAATAGTCAATCCAACTCTTCACATCACTTGGAAGTGGAACAATCAGGTATGCTTATTCTCTCAGGCGTCAAAGTTGGAAAAGATAAAAAGTTTATTCCAGCCCTTCCACTTCATTACTCAAGAAAAGGATCTTCTCATCATTTCTCTAAATTTCAAGAGATCAATAACGATTCAATCAAAGTTGGTTGCGTTTGTGCGTAGGTTTCGGACATAAAAGCAAATCAGCCTTCATTCAACCCCTCAAAATTGCTTCACCTCTCTCAGAGATTCAGGCTAAGAAGCACAGATACAGATACGAGACACAGACACGGACACGACACCAGCACGACAACACGTCATTTTTAAAAATTTAGGACACAACATGAAATGACACATTTGTTAAAATATATATCATTTTTATACCAGAAAAAAATTCAAAGTAAATGGATTGATGAATTTATATGCTTCAAAAATTAGTTTGATGTATTTCACACTCAAATTATTGTCATATATGTGTCTCTGTAGTCTACTCAACAAGTGTTTAGTGCATGTCTTAACACATCTATAGGCTCAAGCTTCATTCCAAGGATTTCTCTTGGCTCAAGCTTCATTCCAAGGATTAGTCTTTTCATTTTTTGATTCGTTGTTCTTTGGGCGCTTGAATTTTAGTTTCTTTTGATTCCAAGGTTTCCAAGGATTAGTCTTTTTATTTTTGTTCTTTTTATTCTAATTTCTATGTTGTATTCTCTCTCTCTCTCTTTTTTTTTGTTTCTTTGTACTTTGAGCTTTTGGCTCTTTTCACTATATCAATGAAAAAGTCTTATTTCCGTTTCAAAAAAAAAAAAAAAAAACAAGTGTCCGATGTGTGGTCAATAAGTGCTGGAGTGTCCAAGTGTCCGACACGTGTAATACACGGACATGCTAGCCAAACTAAAGTGTCTGTGCTTCTTAGGATTCAGGCATTTGACTATTCTTTACTAAATCCATTTGTTAAGTTTGTTCGTGCTACTATTGAGTTTGATGATGATTCAATTGTTAGTGTGAGCAGCAAGGAAGAAGAATTTCATTGTTTGTTTTCAGAAACAAAAGCACTGTTTTCAGAAGAGCAATATGGGGAAGCTTTGGAGAATTTATTACAAAAATCAGTTGAAAGAATTGTTGTTCATACGCCAAAACTATGCTTTTCTCCCGTCTCCTTCTCAAATTCCATCTAATCTTTGCTCCATAGTTGAAGCTTGTGAACTCCAGTTGTGTAAAGTCTCTCCCCTGTTGACTCCTTCAGTGAACTGAATTTTTTTGGTTTTGTAATCATGATTCTCATCTTCTCTTGAGGGCTAGGAGTCATTTCCAAGCATGTTGTTTTGACAAGTTCCTGTAAAATAGGAACCAGGGTTTTAATGTTTTTTCTGAGAAAATTGGTTTGGTGGGATGCTTCTTCTTGTCTTGTGGTAGAAGTCCTATGTTGTTTATAGCGAGCATTTTGGTTGCAGGATCAAGCTTTTGGTAGTTATTGGAGGCCTTGGTTTTGTTGGGTTGGATTAAATATTTTGGCTTTTTTTTTTTTTTTTTTGCTAAGTGGCAAAAAGCATCCATGCATATATATATATTTTTTAACCAGAAACAAGCCTCTTCATTAAGATAATGAAATGAGACTAATGCTCAAAATACAAAGAGATACTCAAAAAATGGATCAGTGGGTGCACCTGGACATCTCAACTATGTTGACACCCTCTTAGCACCTTCATCAATTCCCAAAGATTACAATACTCGAAACATCCAAAATATCTAAAGTTCTACGGACCAAAAACTACAGCTCAGAACTCAATCCCAAAAAATCCAGCAGTTTCAAAGGGATACCCAGTCTAATCACAACCAAAAAATATACTAAAACCGAGTTGAAACTAAAAATAACAGATTTGTGACAACAGGCTATCCATCTTGGCAAATGAAGGCATGCCAATTTAAGCTTATTTCTTGAATGGAATAATCTGCAAATGCTTTGGAAAGGGACCACCATGAAGAGGCATTTAGTCTTGCAGCCTCGAGATGCGAAATCCATGGAGTTTCTTTGTCATGAAACACTCGTTGATTTCTTTCGAACCATAAATCAGCAAGCAAAGCCTTTACAGCATTGTTCCAAAGAAGCTGTGAAGTTGAATTCAACTTTGGCCCTACTAGAACCTGCAAAACATTATCCCTGAAAGCATTTTCAAACACCCATCTTATATTAAAACAATTAAATAAATATTACCAACATTGCACAGCATAACAACAATAAAAAAAGAGGTGCTGTTGATCCTCCCCAGCAGCCCTGCATAAAAAACACATGTTAGGAGATAAAAAATTAAAGGGCAGTTTCCTTTGCAATACTGAAGAGCAGTTTAGAAGCCCAAAAAGCATGATCCAAATTGTTATATGAACCCTCCGAGGGCTCTTGGTTTTCCACAGAGCTTTCTTCAAGTGCTTATCTAAAGTGGAGGCCAAAGAGAGATGATTAACAAGGGATTTGACCGTGAATACTCCTTTAGAATCAATTGACCATATACGTTTGTCAGGACAATCCCTTACTGCGATGTTGGAGATGCAACTTAACAATCTCTGAAAATCACTGATTTCTACCTCTTTTAGAAGTCTTCGAGATATGATATTCCAAGAGGAGGTGGAAGGATCCCAGTACTCCATAACCGAACCAGAGGGGAAGCTTGCAATTCTAAATAAATTTGGGAAACTGACCTTCAATGATATATTATCAACTCAAGAGTCTAGCCAGAATGCCACTCTACTTCCATTTCCAATCTTGAAAAATGCCAAAGTTTCCACTTTTAGCCAAGATCTTGAAATGCTAATCCAAGGACTGCGAAGGCTATGACTGACTTTTCCTGCAGTATGCCAATTGAACATGTCTCTCCCATGGAAAAAAAAGCATCCATGCATATTGATTTCACAAGAGAGTAAAATAGTGGTCATTCGCCATTTTCTGTGTTGCTGGAGTTTGATAGCATTCAAGACTGTTTTCCGTTAATTCTTCCTTCAATATTTTGGTTGCCTCTTATCCAAAGGATATACTTCTCTATTAAGACTTGTGGAAGCTTCCATCTCACTGTTTGTCTCCCTCATTTTGTTCTCATTGATCGGCAGTTATTGAAGGGATTTAATATCATTTCCTTGAGTGCTGCTTTCCCAAAGTTCCAATGATTTTTTTAAGTCAAGCATTGGCCTTAGCTTGATCGTTTTGAAGTTGCTAGAGTTAAAGATTCTTCTTGGTGTTCTCTCTCCAATCTATTTGTAGAATTTTCTATGTCTTGTGCTTATCCGGGATTATATTTATTTTTTCAGTTTAATTATCTTGTATTGTTCTATGTATTTCTCTAAGAGTACTTGGAAAATTCTTGTTTTGTTTCGTTTCCTTGTATTTTGAGCATTAGCCTCTTTTCATTTATTTAATGAAAAGTCTTGTTTTACTTTAAAAAAAAAATAATATAAAATTATATCAAGTTTTAGTATAGTAGATTGAGTGTTGAGTGTCGTCTTCAGGATTGGTTTTCTAGTTTGATTGAGTATCGTAGTTATTAACACTTTATTTTATCTAGAGAACCTAAAGATGGAGGTGAAATAATCTAAACTAATCCTAAAATCAACTGTGAGACCTTCTATTAAGCATACATATGATAGTGTAGCTTCAACCCAAAGAACTACAAAAGAAACAATGTGCAAAGTAACATTCTCAAAGGCCTTAACCCACTTTACTCAGTTAAAGACCTCAAGCTTCCACTATTGGAGAAAATTTGGATGGTTTTTGAGAAGGAGACCAGGAGCACTCAACCTTGTATCCTGAACACATTAATTTTCCTCGACCCTTTCAAATTAAGAACTCAATTAAGAAAAATCCCTACAGAAAAAATACAAAGTAAAGGAGTAAGAGAAAACACTATTCTTTCACGATAAATCACTAGCTTGGATGGTCCGTTTTGATGTTACTCGAATTAATACTTCTTCTTGGTCCACACTTTCCAAGTTTTTTTGCGGATTTTTCCATTCAAGACCTATGCTTAAATTGGAATGCCATTATTTTTCCAGCTTAATGCTTATGTTGTTTTTGTGTTTGCACTTTCATTGAACTTCTTGATTTTATATTTTCCTTTGGTTTCCTTGTGTTTTTTTATCTTGTATTTTGAGCATTAGTCTTTTTTCATTTCTTCAATGAAAAGAGTCGTTTTCATTTAAAAAAAAAACCTCATTCCCGTTGTGATATGACGCGATCCTGAGCCTCAAATATCTTTCTTGGCCCAAAGTATGTCTCCTAAACCCTCTAAACTGAGCAAAAATCGAAATTGGACCTTTTCCCCTCTAAATGGCCTCCCAAAAATCAGCCAAAAACTAAGGATTTATAGGTAGTTGCAATGTTGAGACATTAGAGGCTGCGTCTCAACATTTTTGCATGAATTTACAAGAATACCCCTTAGAAAACACGTGCACATCTTCCTTGATTTTTGTCAAAATCCTAGCATCTTGACGTTACCTCCTTGATTTTTATGGCTTGGTTGCATGCGTTTGTGGTGTTGAGACGCTATGGATAGCGTCTCGACATTGTCACTTTGGGATTTCTTGATTTAGCACTCCTTGGTATGACTCTAGTGCTCCAAATTACTTCTTTTGGCTCCAATTACTCCTAGTTTCTTGTCCGAATAATTGTTTTGGCCGAATTTCTCGAAACCTTTAAATAATAAGATAAACACATGGAAGTACTGAAAATTTTCCACCATTAACAATAACTTAAGCCTAGGGATAATATATTTTGTGTGGTATCAAATACCTACAAACTTAACCTTTTGCTAGAGAACAACAAGGGCCCCTAATCTGTGACAATAAACTTCAACTAATGCTCATGAAATCGAATCCTTCAAATGTCTAATACGTGCTTGAGTGTTTGGTACCTCTTTGGCATGGTCGCATAACTAAAGCATTCATGCCCCAAAGCTTGTAACTTCATCCCAATTATTTTCCCCTTCTTATGCTAATTACGTAATTTCCTTGACTACTATTACTAGTTTTAGCGTGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAACAACAAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGAATAAATAGCTTCAACTTTCATGCTAGCTCTAGAATGGTGAGATCATTTGACAGAAGTCTATCACAATAGAGTATTTTTTTCTTATGCTATTGATTCTTTTCCATTATTTAGATTCCACATACTATCAAATCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATGCTGTTCAGATAACATCATTTAAGAACAAGCTAACTGATACTGAGACTGAGTTACTTCTCAAGTATTTCCATTCTTGTGAAGACGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTAATGCATTCATGTAGAACAATGGTTCTAATTGACACAATGCAACAGTTGCAAGGACTGCATTTCTCTGTTCAGGTTTGTTTTTAAGTTCTGTTCTACATTTTTTCTCCTTAAAAGAAATTGCTCTCTAGTACTTGGCTTATCATACAGCGTGGTTGGATTCAGGAGAAACCATGCATTAGAGAACTATTCGAAGCAGGGCAGGTTGAAAAGTGTAGCGGCAAAGGAGGTAAATGTTCAATTGGTACATTATAGATCATATATTTATAATATTTTCAATGTCTGTATAAGGGATGCAGGACATTTTCGATTTCTTTCTGTTTCCATTACCCTGCATAATTGCAAATAGTTGTTTTTATAGAACCAGAAACAAATCCTTTCATTGATGCAATGAAAAGTGTTGAGTTATGAGTTTTTCCTTTTTTACATCTATTTCTTTTTTATTTTATTTTGTAAAAGAAGGATACGCAACTTTTCATTAAAATGATGACAAGAGATTAGTACTCTTAAATACAAAAGGAGCTTACAAGAGACTAATGCTCGGAGATAAAAAAGTACTAAAAATGAAAGAAAATGCTTAGAGCATCGACAAAACTTAAAAGGAAAACATAATTATGAAGGTAATTTTGTCCGGAGTACCATTCAAAGAACCCAGTTGTTTTTAATGTGTAATTTAGTAGTATTGATTAGGTCCATTTTTGTACCTTTATAATCATGAACTTCCATGTAACGTTTGTAGTGCAAAACTAATTTCTTGGACACAAACTTGGAGAATTCTTGAAGAACTCTATTATTACCCTTAGAACTGTAA

mRNA sequence

GAAGTATTGGTCGACCATTTTAGTAGAAACTAAGGATCCACAAGATTCAAGGGTGATCATATTCTCAAATTTCAGGGGAAGTGTAAGGGACATTATGGGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAAGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTACAATGTCATTGTTGCCACATGCATTGGGGAAGAAGGTCTTGATATAATGGAAGTTGATCTTGTCATCTGTTTTGATGCAAACGTTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACTGGAAGGAAGCATGATGGACGAGTGGTAGTTTTAGCGTGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAACAACAAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGAATAAATAGCTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATACTATCAAATCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATGCTGTTCAGATAACATCATTTAAGAACAAGCTAACTGATACTGAGACTGAGTTACTTCTCAAGTATTTCCATTCTTGTGAAGACGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTAATGCATTCATGTAGAACAATGGTTCTAATTGACACAATGCAACAGTTGCAAGGACTGCATTTCTCTGTTCAGCGTGGTTGGATTCAGGAGAAACCATGCATTAGAGAACTATTCGAAGCAGGGCAGGTTGAAAAGTGTAGCGGCAAAGGAGAACTGTAA

Coding sequence (CDS)

ATGGGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTTTATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAAGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTACAATGTCATTGTTGCCACATGCATTGGGGAAGAAGGTCTTGATATAATGGAAGTTGATCTTGTCATCTGTTTTGATGCAAACGTTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACTGGAAGGAAGCATGATGGACGAGTGGTAGTTTTAGCGTGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAACAACAAGCAAGTCTATAAAGAAACACATGCAAAATGGGGGAATAAATAGCTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATACTATCAAATCAGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAGAAAGTGAAAGATGATCATGCTGTTCAGATAACATCATTTAAGAACAAGCTAACTGATACTGAGACTGAGTTACTTCTCAAGTATTTCCATTCTTGTGAAGACGCATGGAGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTAATGCATTCATGTAGAACAATGGTTCTAATTGACACAATGCAACAGTTGCAAGGACTGCATTTCTCTGTTCAGCGTGGTTGGATTCAGGAGAAACCATGCATTAGAGAACTATTCGAAGCAGGGCAGGTTGAAAAGTGTAGCGGCAAAGGAGAACTGTAA

Protein sequence

MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDTETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSVQRGWIQEKPCIRELFEAGQVEKCSGKGEL
BLAST of Lsi11G010040 vs. Swiss-Prot
Match: FANCM_HUMAN (Fanconi anemia group M protein OS=Homo sapiens GN=FANCM PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 3.3e-32
Identity = 72/162 (44.44%), Postives = 106/162 (65.43%), Query Frame = 1

Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           LS+ + I+R   F+G +SGKS KG +QK Q  V+++FR GGYN +V+TC+GEEGLDI EV
Sbjct: 496 LSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEV 555

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL+ICFD+  SPIR++QRMGRTGRK  GR+V++  EG E + Y + Q+  +SI K + + 
Sbjct: 556 DLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQSQSNKRSIYKAISSN 615

Query: 124 GINSFNFHASSRMIPHTI--KSEVQFVKLSIKQFVRPGKKVK 164
                 +  S RM+P  I  K    F+   + +  +P + ++
Sbjct: 616 RQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQ 657

BLAST of Lsi11G010040 vs. Swiss-Prot
Match: FANCM_MOUSE (Fanconi anemia group M protein homolog OS=Mus musculus GN=Fancm PE=1 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 4.3e-32
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 1

Query: 10  IVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICF 69
           ++R   F+G +SGK+ KG +QK Q  V+ +FR GGYN +V+TC+GEEGLDI EVDL+ICF
Sbjct: 487 VIRVMTFVGHASGKNTKGFTQKEQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICF 546

Query: 70  DANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNGGINSFN 129
           DA  SPIR+IQRMGRTGRK  GR+VV+  EG E + Y + Q+  K+I K +         
Sbjct: 547 DAQKSPIRLIQRMGRTGRKRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGNRQVLRL 606

Query: 130 FHASSRMIPHTIKSEV 146
           +  S RM+P  I  E+
Sbjct: 607 YQGSPRMVPDKINPEL 622

BLAST of Lsi11G010040 vs. Swiss-Prot
Match: MPH1_SCLS1 (ATP-dependent DNA helicase mph1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mph1 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 70/157 (44.59%), Postives = 105/157 (66.88%), Query Frame = 1

Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           L+K   ++RA+ F+GQS  K  +G +Q+ Q   + KF+AGG NVIVAT IGEEGLDI EV
Sbjct: 656 LNKHGPMIRASVFVGQSDSKRSEGMNQEKQLETIRKFKAGGINVIVATSIGEEGLDIGEV 715

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL++C+D++ SPIRM+QRMGRTGRK  G++V+L   G E   Y K +   + I++ + +G
Sbjct: 716 DLIVCYDSSSSPIRMLQRMGRTGRKRAGKIVLLLMRGKEEDSYKKSKDNYEQIQRMISSG 775

Query: 124 GINSFNFHASSRMIPHTIKSEV--QFVKLSIKQFVRP 159
              +F    S+R+IP  +K EV  +F+++ ++    P
Sbjct: 776 SRFTFRHDLSARIIPRKVKPEVDKRFIEIPLENTQDP 812

BLAST of Lsi11G010040 vs. Swiss-Prot
Match: MPH1_BOTFB (ATP-dependent DNA helicase MPH1 OS=Botryotinia fuckeliana (strain B05.10) GN=mph1 PE=3 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 8.1e-31
Identity = 66/143 (46.15%), Postives = 98/143 (68.53%), Query Frame = 1

Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           L+K   +++A+ F+GQS  K  +G +Q+ Q   + KF+AGG NVIVAT IGEEGLDI EV
Sbjct: 662 LNKHGPMIKASVFVGQSDSKRSEGMNQEKQLETIRKFKAGGINVIVATSIGEEGLDIGEV 721

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL++C+D++ SPIRM+QRMGRTGRK  G++V+L   G E   Y K +   + +++ + +G
Sbjct: 722 DLIVCYDSSSSPIRMLQRMGRTGRKRAGKIVLLLMRGKEEDSYKKSKDNYEQMQRMISSG 781

Query: 124 GINSFNFHASSRMIPHTIKSEVQ 147
              +F    S+R+IP  +K EV+
Sbjct: 782 SRFTFRHDLSARIIPRDVKPEVE 804

BLAST of Lsi11G010040 vs. Swiss-Prot
Match: MPH1_ASPFU (ATP-dependent DNA helicase mph1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mph1 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30
Identity = 91/283 (32.16%), Postives = 144/283 (50.88%), Query Frame = 1

Query: 4   LSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEV 63
           L + E ++R   F+GQSS K  +G  QK Q ++++KF+ G YN IVAT IGEEGLDI EV
Sbjct: 680 LKRHEPLIRPHVFVGQSSAKGSEGMDQKTQLSIVQKFKKGTYNTIVATSIGEEGLDIGEV 739

Query: 64  DLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHMQNG 123
           DL++C+D++ SPIRM+QRMGRTGRK  G +V+L  +G E + Y+K +   + +++ + +G
Sbjct: 740 DLIVCYDSSASPIRMLQRMGRTGRKRAGNIVLLLMQGKEEESYIKAKDNYEKMQQMIASG 799

Query: 124 GINSFNFHASSRMIPHTIKSEVQFVKLSI------------KQFVRPGKK------VKDD 183
              +F+   S R++P  ++   +  ++ I            ++  RP K+      + DD
Sbjct: 800 TRFTFHDDKSPRILPPGVRPVAEKRQIDIPVENTQADLPEPRRRARPPKRPPKKFHMPDD 859

Query: 184 ------HAVQITSFKNKLTDTE----------------TELLL----------KYFH--- 233
                  A  +T    K  +T+                 E+LL          +Y H   
Sbjct: 860 VETGFAKASSLTGKVTKKAETKRAVRKPTPEPVEVPALEEVLLTPRQQQDLERRYCHIAG 919

BLAST of Lsi11G010040 vs. TrEMBL
Match: A0A0A0LQJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G393190 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 7.5e-124
Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGG+NVIVATCIGEEGLDI
Sbjct: 30  MSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDI 89

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQ TSKSIKKHM
Sbjct: 90  MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHM 149

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGG+NSFNFHASSRMIPH I+ EVQFVKLSIKQFVRPGKKVKDDHAVQI SFKNKLTDT
Sbjct: 150 QNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDT 209

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 239
           ET+LLLKYFH C+DAWRPSLIAFPHFQTFPSRTHGV+HSCRTMVLIDTMQ LQGLHFS
Sbjct: 210 ETQLLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFS 266

BLAST of Lsi11G010040 vs. TrEMBL
Match: A0A061FIW1_THECC (DEAD/DEAH box RNA helicase family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_036398 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.4e-98
Identity = 185/264 (70.08%), Postives = 219/264 (82.95%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M AL+ I D+V+ATEFIGQSSGK+LKGQSQKVQQAVLEKFRAGGYNVIVAT IGEEGLDI
Sbjct: 313 MNALANIGDLVKATEFIGQSSGKALKGQSQKVQQAVLEKFRAGGYNVIVATSIGEEGLDI 372

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDANVSP+RMIQRMGRTGRKH+G+VVVLAC+GSELKGYM+KQ  S+SI KHM
Sbjct: 373 MEVDLVICFDANVSPLRMIQRMGRTGRKHEGQVVVLACQGSELKGYMRKQANSRSINKHM 432

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGG+NSFNFH+S RM+PH  K EVQFV+LSI+QFV  GKK+KDDH V+   F+ KL+  
Sbjct: 433 QNGGMNSFNFHSSPRMVPHIFKPEVQFVELSIEQFVPRGKKLKDDHTVETPPFREKLSVA 492

Query: 181 ETELLLKYFHS-CEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSV 240
           E++L+ KYFHS  E+ WRPSLIAFP+FQ FPS+ + VMHSCRT +LID+MQ LQGL F  
Sbjct: 493 ESDLIAKYFHSTSENTWRPSLIAFPNFQAFPSKVYKVMHSCRTDMLIDSMQYLQGLTFPG 552

Query: 241 QRG--WIQEKPCIRELFEAGQVEK 262
             G  +++ +    + F  G VE+
Sbjct: 553 GNGNFFVEAEVSSGDCFGVGIVEQ 576

BLAST of Lsi11G010040 vs. TrEMBL
Match: V4SJC4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000033mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.9e-97
Identity = 187/253 (73.91%), Postives = 206/253 (81.42%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M AL+ I D+V+ATEFIGQSSGK+LKGQSQKVQQAVLEKFRAGGYNVIVAT IGEEGLDI
Sbjct: 492 MNALATIGDLVKATEFIGQSSGKALKGQSQKVQQAVLEKFRAGGYNVIVATSIGEEGLDI 551

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRV--------------VVLACEGSELKGY 120
           MEVDLVICFDANVSP+RMIQRMGRTGRKHDGRV              +VLAC+GSELKGY
Sbjct: 552 MEVDLVICFDANVSPLRMIQRMGRTGRKHDGRVDILFYLINTPNEVLLVLACKGSELKGY 611

Query: 121 MKKQTTSKSIKKHMQNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDH 180
           M+KQ TSK+IKKHM+NGG+NSFNFH S RMIPH  K EVQFV+LSI+Q+V  GKKVKDDH
Sbjct: 612 MRKQATSKAIKKHMRNGGMNSFNFHPSPRMIPHIFKPEVQFVELSIEQYVSRGKKVKDDH 671

Query: 181 AVQITSFKNKLTDTETELLLKYFHSCEDA-WRPSLIAFPHFQTFPSRTHGVMHSCRTMVL 239
           A+    FK KLT  ET+L+ KYFH   D+ WRPSLIAFPHFQ  PSR H VMHS RT +L
Sbjct: 672 AITTPIFKEKLTAAETDLIAKYFHPTSDSTWRPSLIAFPHFQALPSRVHKVMHSFRTGML 731

BLAST of Lsi11G010040 vs. TrEMBL
Match: A0A0D2VF29_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G139300 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 184/264 (69.70%), Postives = 215/264 (81.44%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M AL  I D+V+ATEFIGQSSGK+LKGQSQKVQQAVLEKFRAGGYNVIVAT IGEEGLDI
Sbjct: 479 MNALESIRDLVKATEFIGQSSGKALKGQSQKVQQAVLEKFRAGGYNVIVATSIGEEGLDI 538

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDANVSP+RMIQRMGRTGRKHDGRVVVLAC+GSELKGYM+KQ +S+SI KHM
Sbjct: 539 MEVDLVICFDANVSPLRMIQRMGRTGRKHDGRVVVLACQGSELKGYMRKQASSRSINKHM 598

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           +NGG+NSF+FH+S RMIPH  K EVQFV+LSI+QFV  GKK+KDDH ++   F+ KLT  
Sbjct: 599 RNGGMNSFSFHSSPRMIPHIFKPEVQFVELSIEQFVPRGKKLKDDHVMETPPFREKLTLA 658

Query: 181 ETELLLKYFH-SCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSV 240
           ET+L+ KYFH + E  WRPSLIAFP  Q FPS+   VMHSCRT +LID+MQ L GL F  
Sbjct: 659 ETDLIAKYFHPTSESTWRPSLIAFPSVQAFPSKVCKVMHSCRTEMLIDSMQHLHGLTFPG 718

Query: 241 QRG--WIQEKPCIRELFEAGQVEK 262
             G  +++++    +   AG VE+
Sbjct: 719 GNGNFFVEDEVSSADHSVAGIVEQ 742

BLAST of Lsi11G010040 vs. TrEMBL
Match: A0A0D2VDJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G139300 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 184/264 (69.70%), Postives = 215/264 (81.44%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M AL  I D+V+ATEFIGQSSGK+LKGQSQKVQQAVLEKFRAGGYNVIVAT IGEEGLDI
Sbjct: 486 MNALESIRDLVKATEFIGQSSGKALKGQSQKVQQAVLEKFRAGGYNVIVATSIGEEGLDI 545

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDANVSP+RMIQRMGRTGRKHDGRVVVLAC+GSELKGYM+KQ +S+SI KHM
Sbjct: 546 MEVDLVICFDANVSPLRMIQRMGRTGRKHDGRVVVLACQGSELKGYMRKQASSRSINKHM 605

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           +NGG+NSF+FH+S RMIPH  K EVQFV+LSI+QFV  GKK+KDDH ++   F+ KLT  
Sbjct: 606 RNGGMNSFSFHSSPRMIPHIFKPEVQFVELSIEQFVPRGKKLKDDHVMETPPFREKLTLA 665

Query: 181 ETELLLKYFH-SCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFSV 240
           ET+L+ KYFH + E  WRPSLIAFP  Q FPS+   VMHSCRT +LID+MQ L GL F  
Sbjct: 666 ETDLIAKYFHPTSESTWRPSLIAFPSVQAFPSKVCKVMHSCRTEMLIDSMQHLHGLTFPG 725

Query: 241 QRG--WIQEKPCIRELFEAGQVEK 262
             G  +++++    +   AG VE+
Sbjct: 726 GNGNFFVEDEVSSADHSVAGIVEQ 749

BLAST of Lsi11G010040 vs. TAIR10
Match: AT1G35530.2 (AT1G35530.2 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 321.2 bits (822), Expect = 5.9e-88
Identity = 166/242 (68.60%), Postives = 198/242 (81.82%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGG+NVIVAT IGEEGLDI
Sbjct: 484 MNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDI 543

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGR-VVVLACEGSELKGYMKKQTTSKSIKKH 120
           MEVDLVICFDANVSP+RMIQRMGRTGRK++GR ++VLACEGSE   YM+KQ + ++IKKH
Sbjct: 544 MEVDLVICFDANVSPLRMIQRMGRTGRKNNGRPLLVLACEGSEKNSYMRKQASGRAIKKH 603

Query: 121 MQNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTD 180
           M+NGG NSFNFH S RMIPH  K EVQ V+ SIKQFV  GKK+++++A +  +F+ KLT 
Sbjct: 604 MRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTP 663

Query: 181 TETELLLKYFHS-CEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 240
            ET +L KY+++  E+  R SLIAFPHFQT PS+ H VMHS +T +LID MQ LQ   FS
Sbjct: 664 AETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHKVMHSRQTGMLIDAMQHLQEPTFS 723

BLAST of Lsi11G010040 vs. TAIR10
Match: AT1G12770.1 (AT1G12770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 30/98 (30.61%), Postives = 48/98 (48.98%), Query Frame = 1

Query: 6   KIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDL 65
           +++D+V   E  G +S +      +  +  VL+KF+ G   V+V   +   GLD+ E DL
Sbjct: 419 QLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDL 478

Query: 66  VICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSEL 104
           V+  +     +    R GRTGR      VV  CE S++
Sbjct: 479 VVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQV 516

BLAST of Lsi11G010040 vs. TAIR10
Match: AT3G03300.1 (AT3G03300.1 dicer-like 2)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 1

Query: 18  GQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIR 77
           G +SG  L+ Q++K Q  ++E FR G  N+IVAT I EEGLD+   +LVI FD   +   
Sbjct: 424 GNNSG--LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 483

Query: 78  MIQRMGR 85
            IQ  GR
Sbjct: 484 FIQSRGR 488

BLAST of Lsi11G010040 vs. TAIR10
Match: AT1G16280.1 (AT1G16280.1 RNA helicase 36)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 1

Query: 29  SQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIRMIQRMGRTGRK 88
           SQ ++ + L KF++G   +++AT +   GLDI  VDLVI +D    P   + R+GRT R 
Sbjct: 337 SQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARA 396

Query: 89  HDGRVVVLACEGSELK 105
             G + V     +++K
Sbjct: 397 GRGGLAVSIITETDVK 412

BLAST of Lsi11G010040 vs. TAIR10
Match: AT5G26742.2 (AT5G26742.2 DEAD box RNA helicase (RH3))

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 1

Query: 29  SQKVQQAVLEKFRAGGYNVIVATCIGEEGLDIMEVDLVICFDANVSPIRMIQRMGRTGR 88
           SQ  ++  L  FR G + V+VAT +   GLDI  VDLVI ++    P   + R GRTGR
Sbjct: 385 SQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 443

BLAST of Lsi11G010040 vs. NCBI nr
Match: gi|659081089|ref|XP_008441146.1| (PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo])

HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGG+NVIVATCIGEEGLDI
Sbjct: 492 MSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDI 551

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQ TSKSIKKHM
Sbjct: 552 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHM 611

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPH I+ EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT
Sbjct: 612 QNGGINSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 671

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 239
           ETELLLKYFH C+DAWRPSLIAFPHFQTFPSRTHGV+HS RTMVLI+TMQ LQGLHFS
Sbjct: 672 ETELLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSSRTMVLINTMQHLQGLHFS 729

BLAST of Lsi11G010040 vs. NCBI nr
Match: gi|659081092|ref|XP_008441147.1| (PREDICTED: Fanconi anemia group M protein isoform X3 [Cucumis melo])

HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGG+NVIVATCIGEEGLDI
Sbjct: 506 MSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDI 565

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQ TSKSIKKHM
Sbjct: 566 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHM 625

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPH I+ EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT
Sbjct: 626 QNGGINSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 685

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 239
           ETELLLKYFH C+DAWRPSLIAFPHFQTFPSRTHGV+HS RTMVLI+TMQ LQGLHFS
Sbjct: 686 ETELLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSSRTMVLINTMQHLQGLHFS 743

BLAST of Lsi11G010040 vs. NCBI nr
Match: gi|659081094|ref|XP_008441148.1| (PREDICTED: Fanconi anemia group M protein isoform X4 [Cucumis melo])

HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGG+NVIVATCIGEEGLDI
Sbjct: 506 MSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDI 565

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQ TSKSIKKHM
Sbjct: 566 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHM 625

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPH I+ EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT
Sbjct: 626 QNGGINSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 685

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 239
           ETELLLKYFH C+DAWRPSLIAFPHFQTFPSRTHGV+HS RTMVLI+TMQ LQGLHFS
Sbjct: 686 ETELLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSSRTMVLINTMQHLQGLHFS 743

BLAST of Lsi11G010040 vs. NCBI nr
Match: gi|659081087|ref|XP_008441145.1| (PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo])

HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-124
Identity = 225/238 (94.54%), Postives = 231/238 (97.06%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGG+NVIVATCIGEEGLDI
Sbjct: 506 MSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDI 565

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQ TSKSIKKHM
Sbjct: 566 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHM 625

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGGINSFNFHASSRMIPH I+ EVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT
Sbjct: 626 QNGGINSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 685

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 239
           ETELLLKYFH C+DAWRPSLIAFPHFQTFPSRTHGV+HS RTMVLI+TMQ LQGLHFS
Sbjct: 686 ETELLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSSRTMVLINTMQHLQGLHFS 743

BLAST of Lsi11G010040 vs. NCBI nr
Match: gi|778672808|ref|XP_011649875.1| (PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-123
Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 1

Query: 1   MGALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGYNVIVATCIGEEGLDI 60
           M ALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGG+NVIVATCIGEEGLDI
Sbjct: 506 MSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDI 565

Query: 61  MEVDLVICFDANVSPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQTTSKSIKKHM 120
           MEVDLVICFDAN+SPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQ TSKSIKKHM
Sbjct: 566 MEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHM 625

Query: 121 QNGGINSFNFHASSRMIPHTIKSEVQFVKLSIKQFVRPGKKVKDDHAVQITSFKNKLTDT 180
           QNGG+NSFNFHASSRMIPH I+ EVQFVKLSIKQFVRPGKKVKDDHAVQI SFKNKLTDT
Sbjct: 626 QNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDT 685

Query: 181 ETELLLKYFHSCEDAWRPSLIAFPHFQTFPSRTHGVMHSCRTMVLIDTMQQLQGLHFS 239
           ET+LLLKYFH C+DAWRPSLIAFPHFQTFPSRTHGV+HSCRTMVLIDTMQ LQGLHFS
Sbjct: 686 ETQLLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFS 742

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FANCM_HUMAN3.3e-3244.44Fanconi anemia group M protein OS=Homo sapiens GN=FANCM PE=1 SV=2[more]
FANCM_MOUSE4.3e-3250.74Fanconi anemia group M protein homolog OS=Mus musculus GN=Fancm PE=1 SV=3[more]
MPH1_SCLS11.6e-3144.59ATP-dependent DNA helicase mph1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 /... [more]
MPH1_BOTFB8.1e-3146.15ATP-dependent DNA helicase MPH1 OS=Botryotinia fuckeliana (strain B05.10) GN=mph... [more]
MPH1_ASPFU3.1e-3032.16ATP-dependent DNA helicase mph1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ... [more]
Match NameE-valueIdentityDescription
A0A0A0LQJ7_CUCSA7.5e-12494.12Uncharacterized protein OS=Cucumis sativus GN=Csa_2G393190 PE=4 SV=1[more]
A0A061FIW1_THECC2.4e-9870.08DEAD/DEAH box RNA helicase family protein, putative isoform 2 OS=Theobroma cacao... [more]
V4SJC4_9ROSI5.9e-9773.91Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000033mg PE=4 SV=1[more]
A0A0D2VF29_GOSRA2.3e-9669.70Uncharacterized protein OS=Gossypium raimondii GN=B456_013G139300 PE=4 SV=1[more]
A0A0D2VDJ0_GOSRA2.3e-9669.70Uncharacterized protein OS=Gossypium raimondii GN=B456_013G139300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G35530.25.9e-8868.60 DEAD/DEAH box RNA helicase family protein [more]
AT1G12770.13.9e-0730.61 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT3G03300.13.9e-0746.27 dicer-like 2[more]
AT1G16280.11.1e-0635.53 RNA helicase 36[more]
AT5G26742.21.5e-0644.07 DEAD box RNA helicase (RH3)[more]
Match NameE-valueIdentityDescription
gi|659081089|ref|XP_008441146.1|2.2e-12494.54PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo][more]
gi|659081092|ref|XP_008441147.1|2.2e-12494.54PREDICTED: Fanconi anemia group M protein isoform X3 [Cucumis melo][more]
gi|659081094|ref|XP_008441148.1|2.2e-12494.54PREDICTED: Fanconi anemia group M protein isoform X4 [Cucumis melo][more]
gi|659081087|ref|XP_008441145.1|2.2e-12494.54PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo][more]
gi|778672808|ref|XP_011649875.1|1.1e-12394.12PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001650Helicase_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G010040.1Lsi11G010040.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 25..88
score: 3.9
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 8..89
score: 2.9
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 1..136
score: 13
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 23..104
score: 1.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..109
score: 2.37
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 4..233
score: 2.5
NoneNo IPR availablePANTHERPTHR14025:SF20FANCONI ANEMIA GROUP M PROTEINcoord: 4..233
score: 2.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G010040CSPI02G24470Wild cucumber (PI 183967)cpilsiB098
Lsi11G010040MELO3C008072Melon (DHL92) v3.5.1lsimeB107
Lsi11G010040Bhi04G002085Wax gourdlsiwgoB122
The following gene(s) are paralogous to this gene:

None