Lsi11G006490 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G006490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	chr11 : 6843080 .. 6843598 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTAGTCACAGAAGAGATCAAAGCCAAAGCTGATGAGCTTTACTATGGAGATGAGATGTGCCAAGAGAAATCAAAGGAGCTGCTCAAAGAAATGGACCTTCCAAATGGGCTGTTGCCAATGAAAGACATGGAGGAATGTGGGATGGTGAAAGAGACAGGGTTTGTTTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTTGAACAGATTGATAGGCTGGTTACTTATGGCACTGAAGTTACAGCCTATGTGCAGAAGAACAAGATTAAGAAGCTTACTGGAGTCAAGGCCAAGGAGCTCTTGGTTTGGCTCCCACTCTGTGATATCTATGTTAATGAACCACCGAACGGAAAAATCACGTTCAAGTCTACGACTGGGCTGTCGAGAACTTTTCCCGTGTCAGCTTTTGAGGTTGAAGAAAAAGTCAAGGATGTTGAAGAGAAGGACAACAAAGAGAAGGAAGTAGTGAATGCAGCAGCTGCAGCTGCAGCTATAGAGGTGAAGGAGGTCTGA

mRNA sequence

ATGTCTCTAGTCACAGAAGAGATCAAAGCCAAAGCTGATGAGCTTTACTATGGAGATGAGATGTGCCAAGAGAAATCAAAGGAGCTGCTCAAAGAAATGGACCTTCCAAATGGGCTGTTGCCAATGAAAGACATGGAGGAATGTGGGATGGTGAAAGAGACAGGGTTTGTTTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTTGAACAGATTGATAGGCTGGTTACTTATGGCACTGAAGTTACAGCCTATGTGCAGAAGAACAAGATTAAGAAGCTTACTGGAGTCAAGGCCAAGGAGCTCTTGGTTTGGCTCCCACTCTGTGATATCTATGTTAATGAACCACCGAACGGAAAAATCACGTTCAAGTCTACGACTGGGCTGTCGAGAACTTTTCCCGTGTCAGCTTTTGAGGTTGAAGAAAAAGTCAAGGATGTTGAAGAGAAGGACAACAAAGAGAAGGAAGTAGTGAATGCAGCAGCTGCAGCTGCAGCTATAGAGGTGAAGGAGGTCTGA

Coding sequence (CDS)

ATGTCTCTAGTCACAGAAGAGATCAAAGCCAAAGCTGATGAGCTTTACTATGGAGATGAGATGTGCCAAGAGAAATCAAAGGAGCTGCTCAAAGAAATGGACCTTCCAAATGGGCTGTTGCCAATGAAAGACATGGAGGAATGTGGGATGGTGAAAGAGACAGGGTTTGTTTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTTGAACAGATTGATAGGCTGGTTACTTATGGCACTGAAGTTACAGCCTATGTGCAGAAGAACAAGATTAAGAAGCTTACTGGAGTCAAGGCCAAGGAGCTCTTGGTTTGGCTCCCACTCTGTGATATCTATGTTAATGAACCACCGAACGGAAAAATCACGTTCAAGTCTACGACTGGGCTGTCGAGAACTTTTCCCGTGTCAGCTTTTGAGGTTGAAGAAAAAGTCAAGGATGTTGAAGAGAAGGACAACAAAGAGAAGGAAGTAGTGAATGCAGCAGCTGCAGCTGCAGCTATAGAGGTGAAGGAGGTCTGA

Protein sequence

MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV

Homology

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BLAST of Lsi11G006490 vs. TrEMBL
Match: A0A0A0LH04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034670 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 8.0e-79
Identity = 154/187 (82.35%), Postives = 167/187 (89.30%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MSL+TE+IKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLK
Sbjct: 1   MSLITEDIKAKADELYYGDEMCQIKSRELLKEMDLPNGLLPMKDMEECGIVKETGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAKEL++WLPLCDIYVN+PPNGK
Sbjct: 61  QKKSYTHKFKDIDRLVTYGTEVTAYVEKNKVKKLTGVKAKELMIWLPLCDIYVNQPPNGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVE---------------EKDNKEKEVVNAAAAAA 173
           ITFKSTTGLSRTFPVSAF+VEE+VK VE               EK+NKEKEVVN A AAA
Sbjct: 121 ITFKSTTGLSRTFPVSAFQVEEEVKVVEEKENKERENKEKEKKEKENKEKEVVNGAVAAA 180

[Close]

BLAST of Lsi11G006490 vs. TrEMBL
Match: A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 117/172 (68.02%), Postives = 141/172 (81.98%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MS+VTEEIK K +E+Y+GDE+CQEKSKELLKE+ LPNGLLP+KD+EECG+++ETGFVWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS THKFE+I +LV+Y TEVTA V+KNKIKKLTGVK KELL+W+ L DIYV++PP GK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV 173
           ITF++  GL RTFPVSAF+VEE VK V EK  +  E V         EVKE+
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETV---------EVKEI 196

[Close]

BLAST of Lsi11G006490 vs. TrEMBL
Match: A0A061F325_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026789 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-56
Identity = 114/172 (66.28%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MSLVT+EIKA A E+Y+GDE+CQEKSK LL+E+ +P GLLP++D+EECG VK+TGFVWLK
Sbjct: 1   MSLVTDEIKASASEIYHGDEICQEKSKFLLEEVGMPRGLLPLRDIEECGYVKDTGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS THKFE+I +LV+Y  EVTA V+++KIKKLTGVK KELL+W+ L DIYV++PP GK
Sbjct: 61  QKKSITHKFEKIGKLVSYAPEVTAVVEQSKIKKLTGVKTKELLLWITLSDIYVDDPPTGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV 173
           ITFK+  GLSR+FPVSAFE+E +VKD +EK  +EK+V        A+EVKEV
Sbjct: 121 ITFKTPAGLSRSFPVSAFEIEGEVKDAKEKKKEEKDV------NEALEVKEV 166

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BLAST of Lsi11G006490 vs. TrEMBL
Match: A0A0D2R658_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G235700 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.6e-56
Identity = 114/169 (67.46%), Postives = 137/169 (81.07%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MSLVTEEIK  A E+Y+GDE+CQEKSK LL+EM +P+GLLP+KD+EECG VK+TGFVWLK
Sbjct: 1   MSLVTEEIKGSASEIYHGDEICQEKSKFLLEEMGMPSGLLPLKDIEECGYVKDTGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS THKF++I +LV+Y TEVTA V+KNKIKKLTGVK KELLVW+ L DIYV++PP G 
Sbjct: 61  QKKSITHKFDKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLVWITLSDIYVDDPPTGN 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEV 170
           ITFK+  GL RTFPVSAFEVE ++K   +   +EK+ V  AA  A  EV
Sbjct: 121 ITFKTPAGLFRTFPVSAFEVEGELKGAVKDKKEEKDNVKPAAVEAVKEV 169

[Close]

BLAST of Lsi11G006490 vs. TrEMBL
Match: B7FM98_MEDTR (Plant/F25P12-18 protein OS=Medicago truncatula GN=MTR_1g084200 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.3e-56
Identity = 119/174 (68.39%), Postives = 146/174 (83.91%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           M+L+T+EI+ K+ E+Y GDE+CQ KSKELL E++LPNGLLP+KD+EECG  +E+GFVWLK
Sbjct: 1   MNLLTDEIRGKS-EVYNGDEICQAKSKELLLEINLPNGLLPLKDIEECGYHRESGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QK SYTHKFE++DRLVTYGTEVTA V+  KIKKLTGVK KELLVWLPL +I +++PP GK
Sbjct: 61  QKASYTHKFEKVDRLVTYGTEVTATVEVGKIKKLTGVKVKELLVWLPLHEIQLDDPPTGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEV-EEKVKDV-EEKDNKEKEVVNAAAAAAAIEVKEV 173
           ITF++ TGL RTFP SAFE+ EE+VKDV EE  ++ KE    AA AAA+EVKEV
Sbjct: 121 ITFRAITGLFRTFPASAFEIEEEQVKDVKEENKDQVKEAEAPAATAAAVEVKEV 173

[Close]

BLAST of Lsi11G006490 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538)

HSP 1 Score: 190.7 bits (483), Expect = 7.7e-49
Identity = 105/179 (58.66%), Postives = 132/179 (73.74%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           M LVTEE++AKA E+Y GDE+C+EK+K  LKE+ +PNGLLP+KD+EE G  +E+G VWLK
Sbjct: 1   MGLVTEEVRAKA-EMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS THKF +ID+LV+YGTEVTA V+  KIKKLTGVKAKELL+W+ + +IY  EPP  K
Sbjct: 61  QKKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-K 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEE--------KVKDVEEKDNKEKEVVNAAAAAAAIEVKE 172
           ITFK+ T LSRTFPV+AF V E        K +  +EK ++  E   A A   A+ VKE
Sbjct: 121 ITFKTPTTLSRTFPVTAFIVPEEPAKEEPAKEEPAKEKSSEATEAKEAVAIKEAVAVKE 177

[Close]

BLAST of Lsi11G006490 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538)

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47
Identity = 99/167 (59.28%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           M LVT+E++A+A++ Y GDE+C+EK+KE LKE+ +PNGLLP+KD+EE G  +ETG VWLK
Sbjct: 1   MGLVTDEVRARAEK-YTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEP-PNG 120
           QKKS THKFE I +LV+Y TEV A V+  KIKKLTGVKAKELL+W+ L ++ + +P  +G
Sbjct: 61  QKKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSG 120

Query: 121 KITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAA 167
           KI F++ TGLSRTFPVSAF V E  K   EK+N   EV  A A   A
Sbjct: 121 KINFRTPTGLSRTFPVSAFVVPEVEKPATEKNNGTTEVKEAVAVTDA 166

[Close]

BLAST of Lsi11G006490 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538)

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-32
Identity = 61/133 (45.86%), Postives = 95/133 (71.43%), Query Frame = 1


Query: 14  ELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQID 73
           E+ YG E C ++S ELL+E+  P G++P+K++ ECG V+ TG+VW+KQ   Y H FE  +
Sbjct: 17  EIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYEHFFEATN 76

Query: 74  RLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTF 133
             V+YG EVTAYV K  +KK+TGVK+K++ +W+P+ ++ + EP + KI FK+  G+ R+F
Sbjct: 77  TRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTPMGIGRSF 136

Query: 134 PVSAFEVEEKVKD 147
           PV+ F  EE+ ++
Sbjct: 137 PVTGFMDEEEKRN 149

[Close]

BLAST of Lsi11G006490 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538)

HSP 1 Score: 134.0 bits (336), Expect = 8.6e-32
Identity = 62/138 (44.93%), Postives = 97/138 (70.29%), Query Frame = 1


Query: 5   TEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKS 64
           T+  + +  E+  G+  C++K+KE+L  M+LP GLLP+ +M E G  K TG+VW+K K  
Sbjct: 6   TKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNK 65

Query: 65  YTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGKITFK 124
             H+F+ I R V+Y +EVTA ++  ++ +LTG+K+KE+L+W+ + +I+VN     +ITF 
Sbjct: 66  VQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFA 125

Query: 125 STTGLSRTFPVSAFEVEE 143
           + TGLSRTFPV+AFE +E
Sbjct: 126 NPTGLSRTFPVTAFEEDE 143

[Close]

BLAST of Lsi11G006490 vs. TAIR10
Match: AT5G49600.1 (AT5G49600.1 Protein of unknown function, DUF538)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-31
Identity = 80/162 (49.38%), Postives = 107/162 (66.05%), Query Frame = 1


Query: 3   LVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK-- 62
           +VTE +KAKA E+Y+GD+ C+EK   LL E+ LPN LL  K+++ECG VK+TGFVWLK  
Sbjct: 1   MVTEAMKAKA-EVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHK 60

Query: 63  ------QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVN 122
                 QK+ Y       + +V +  EVTAY + N+IKKLTGVKAKE +VW+ L +I VN
Sbjct: 61  EKKKEDQKRRYQDLLRFDNVVVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQVN 120

Query: 123 EPPNGKITFKSTTG-LSRTFPVSAFE-VEEKVKDVEEKDNKE 155
              +G ITFK+  G LS++ P+S FE V     D++EK  KE
Sbjct: 121 R-SSGLITFKTEVGLLSKSLPLSVFEDVHGDDHDLKEKPKKE 160

[Close]

BLAST of Lsi11G006490 vs. NCBI nr
Match: gi|659070072|ref|XP_008453262.1| (PREDICTED: uncharacterized protein LOC103494033 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 1.4e-79
Identity = 155/177 (87.57%), Postives = 166/177 (93.79%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLK
Sbjct: 1   MSLITEEIKAKADELYYGDEMCQIKSRELLKEMDLPNGLLPMKDMEECGIVKETGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAKEL++WLPLCDIYVN+PPNGK
Sbjct: 61  QKKSYTHKFKDIDRLVTYGTEVTAYVEKNKVKKLTGVKAKELMIWLPLCDIYVNQPPNGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE-----VVNAAAAAAAIEVKEV 173
           ITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE     VVN AAAAAAIEVKEV
Sbjct: 121 ITFKSTTGLSRTFPVSAFQVEEDVKVVGEKENKEKENKEKKVVNGAAAAAAIEVKEV 177

[Close]

BLAST of Lsi11G006490 vs. NCBI nr
Match: gi|778667133|ref|XP_011648877.1| (PREDICTED: uncharacterized protein LOC105434559 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-78
Identity = 154/187 (82.35%), Postives = 167/187 (89.30%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MSL+TE+IKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLK
Sbjct: 1   MSLITEDIKAKADELYYGDEMCQIKSRELLKEMDLPNGLLPMKDMEECGIVKETGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAKEL++WLPLCDIYVN+PPNGK
Sbjct: 61  QKKSYTHKFKDIDRLVTYGTEVTAYVEKNKVKKLTGVKAKELMIWLPLCDIYVNQPPNGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVE---------------EKDNKEKEVVNAAAAAA 173
           ITFKSTTGLSRTFPVSAF+VEE+VK VE               EK+NKEKEVVN A AAA
Sbjct: 121 ITFKSTTGLSRTFPVSAFQVEEEVKVVEEKENKERENKEKEKKEKENKEKEVVNGAVAAA 180

[Close]

BLAST of Lsi11G006490 vs. NCBI nr
Match: gi|1009116603|ref|XP_015874863.1| (PREDICTED: uncharacterized protein LOC107411730 [Ziziphus jujuba])

HSP 1 Score: 241.9 bits (616), Expect = 8.3e-61
Identity = 125/172 (72.67%), Postives = 149/172 (86.63%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MSLVTEE KAKADELY+GD++CQEKSK LLKE+ LPNGLLP+KDMEECG VKETGFVW+K
Sbjct: 1   MSLVTEENKAKADELYHGDDLCQEKSKLLLKEIGLPNGLLPLKDMEECGYVKETGFVWMK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS+THKF++I +LV+Y  EVTAYV++NKIKKLTGVK KELLVW+ L DIYV++PP GK
Sbjct: 61  QKKSHTHKFDKIGKLVSYAPEVTAYVEQNKIKKLTGVKTKELLVWITLSDIYVDDPPTGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV 173
           ITFK+ +GLSR+FPVSAFEVEE VKDV  K+N+E + V     + A+EVKEV
Sbjct: 121 ITFKTPSGLSRSFPVSAFEVEEPVKDV--KENQEVKGV-----SGAVEVKEV 165

[Close]

BLAST of Lsi11G006490 vs. NCBI nr
Match: gi|700209917|gb|KGN65013.1| (hypothetical protein Csa_1G181260 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 117/172 (68.02%), Postives = 141/172 (81.98%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MS+VTEEIK K +E+Y+GDE+CQEKSKELLKE+ LPNGLLP+KD+EECG+++ETGFVWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS THKFE+I +LV+Y TEVTA V+KNKIKKLTGVK KELL+W+ L DIYV++PP GK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV 173
           ITF++  GL RTFPVSAF+VEE VK V EK  +  E V         EVKE+
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETV---------EVKEI 196

[Close]

BLAST of Lsi11G006490 vs. NCBI nr
Match: gi|778659689|ref|XP_004139521.2| (PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 117/172 (68.02%), Postives = 141/172 (81.98%), Query Frame = 1


Query: 1   MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK 60
           MS+VTEEIK K +E+Y+GDE+CQEKSKELLKE+ LPNGLLP+KD+EECG+++ETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYVNEPPNGK 120
           QKKS THKFE+I +LV+Y TEVTA V+KNKIKKLTGVK KELL+W+ L DIYV++PP GK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 121 ITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV 173
           ITF++  GL RTFPVSAF+VEE VK V EK  +  E V         EVKE+
Sbjct: 121 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETV---------EVKEI 163

The following BLAST results are available for this feature:

BLAST of Lsi11G006490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G006490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH04_CUCSA	8.0e-79	82.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034670 PE=4 SV=1	[more]
A0A0A0LTC9_CUCSA	1.3e-57	68.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1	[more]
A0A061F325_THECC	2.5e-56	66.28	Uncharacterized protein OS=Theobroma cacao GN=TCM_026789 PE=4 SV=1	[more]
A0A0D2R658_GOSRA	5.6e-56	67.46	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G235700 PE=4 SV=1	[more]
B7FM98_MEDTR	7.3e-56	68.39	Plant/F25P12-18 protein OS=Medicago truncatula GN=MTR_1g084200 PE=2 SV=1	[more]

BLAST of Lsi11G006490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09310.1	7.7e-49	58.66	Protein of unknown function, DUF538	[more]
AT1G56580.1	1.5e-47	59.28	Protein of unknown function, DUF538	[more]
AT4G24130.1	2.3e-32	45.86	Protein of unknown function, DUF538	[more]
AT5G46230.1	8.6e-32	44.93	Protein of unknown function, DUF538	[more]
AT5G49600.1	4.2e-31	49.38	Protein of unknown function, DUF538	[more]

BLAST of Lsi11G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070072\|ref\|XP_008453262.1\|	1.4e-79	87.57	PREDICTED: uncharacterized protein LOC103494033 [Cucumis melo]	[more]
gi\|778667133\|ref\|XP_011648877.1\|	1.1e-78	82.35	PREDICTED: uncharacterized protein LOC105434559 [Cucumis sativus]	[more]
gi\|1009116603\|ref\|XP_015874863.1\|	8.3e-61	72.67	PREDICTED: uncharacterized protein LOC107411730 [Ziziphus jujuba]	[more]
gi\|700209917\|gb\|KGN65013.1\|	1.9e-57	68.02	hypothetical protein Csa_1G181260 [Cucumis sativus]	[more]
gi\|778659689\|ref\|XP_004139521.2\|	1.9e-57	68.02	PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G006490.1	Lsi11G006490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 12..144 score: 6.6
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 27..139 score: 1.8
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 13..146 score: 5.62
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 1..167 score: 2.9
None	No IPR available	PANTHER	PTHR31676:SF10	SUBFAMILY NOT NAMED	coord: 1..167 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G006490	Csa2G034670	Cucumber (Chinese Long) v2	culsiB098
Lsi11G006490	Cucsa.090520	Cucumber (Gy14) v1	cgylsiB100
Lsi11G006490	CmaCh05G010660	Cucurbita maxima (Rimu)	cmalsiB715
Lsi11G006490	CmoCh10G012440	Cucurbita moschata (Rifu)	cmolsiB034
Lsi11G006490	CmoCh05G010760	Cucurbita moschata (Rifu)	cmolsiB706
Lsi11G006490	Cla019982	Watermelon (97103) v1	lsiwmB107
Lsi11G006490	MELO3C004171	Melon (DHL92) v3.5.1	lsimeB115
Lsi11G006490	MELO3C015251	Melon (DHL92) v3.5.1	lsimeB105
Lsi11G006490	ClCG02G014780	Watermelon (Charleston Gray)	lsiwcgB098
Lsi11G006490	MELO3C015251.2	Melon (DHL92) v3.6.1	lsimedB112
Lsi11G006490	MELO3C004171.2	Melon (DHL92) v3.6.1	lsimedB123
Lsi11G006490	Cla97C02G040570	Watermelon (97103) v2	lsiwmbB087
Lsi11G006490	Bhi06G001350	Wax gourd	lsiwgoB101
Lsi11G006490	CsGy2G004980	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G006490	CsGy1G024880	Cucumber (Gy14) v2	cgyblsiB012
Lsi11G006490	Carg11994	Silver-seed gourd	carlsiB510
Lsi11G006490	CsaV3_2G007230	Cucumber (Chinese Long) v3	cuclsiB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G006490	Bottle gourd (USVL1VR-Ls)	lsilsiB002
Lsi11G006490	Cucurbita maxima (Rimu)	cmalsiB159
Lsi11G006490	Cucurbita moschata (Rifu)	cmolsiB148
Lsi11G006490	Cucurbita moschata (Rifu)	cmolsiB331
Lsi11G006490	Cucurbita pepo (Zucchini)	cpelsiB075
Lsi11G006490	Cucurbita pepo (Zucchini)	cpelsiB659
Lsi11G006490	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G006490	Watermelon (Charleston Gray)	lsiwcgB105
Lsi11G006490	Watermelon (Charleston Gray)	lsiwcgB111
Lsi11G006490	Watermelon (97103) v1	lsiwmB094
Lsi11G006490	Silver-seed gourd	carlsiB850
Lsi11G006490	Watermelon (97103) v2	lsiwmbB099