Carg11994 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11994
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function, DUF538
Location	Cucurbita_argyrosperma_scaffold_037 : 345931 .. 346446 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTGTCACAGAAGCTATCAAAGCCAAAGCTGATGAGGTCTACCATGGTGATGAGATCTGCCAAGCAAAAACGAGGGAGTTGCTCAAAGAAATGGATCTTCCCAATGGACTGTTGCCAATGAAAGACATGGAGGAATGTGGTATCATCAAGGAGACAGGGTTTGTCTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTCCAAGATATTGGGAGGCTTGTAACATATGGCAAAGAAGTTACAGCCTATGTCGAAAAAAACAAGGTTAAGAAGCTCACTGGGGTCAAGGCCAAGGAGCTCTTGATTTGGCTCTCACTCTCCGATATCTATGTCGATCACCCACCGACCGGGAAGATCACGTTCAAGGCCACGACCGGGCTGTTTCGAACTTTCCCAGTGTCGGCTTTCGAGGTTGAAGAAGATGTCGTCAAGGATGTGGAAGTGAAGAACAATAATGAGAAGGAAGTGGTGAGTGTAGCAGCTGCAGCTATTGAAGTGAAGCAGATTTGA

mRNA sequence

ATGTCTCTTGTCACAGAAGCTATCAAAGCCAAAGCTGATGAGGTCTACCATGGTGATGAGATCTGCCAAGCAAAAACGAGGGAGTTGCTCAAAGAAATGGATCTTCCCAATGGACTGTTGCCAATGAAAGACATGGAGGAATGTGGTATCATCAAGGAGACAGGGTTTGTCTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTCCAAGATATTGGGAGGCTTGTAACATATGGCAAAGAAGTTACAGCCTATGTCGAAAAAAACAAGGTTAAGAAGCTCACTGGGGTCAAGGCCAAGGAGCTCTTGATTTGGCTCTCACTCTCCGATATCTATGTCGATCACCCACCGACCGGGAAGATCACGTTCAAGGCCACGACCGGGCTGTTTCGAACTTTCCCAGTGTCGGCTTTCGAGGTTGAAGAAGATGTCGTCAAGGATGTGGAAGTGAAGAACAATAATGAGAAGGAAGTGGTGAGTGTAGCAGCTGCAGCTATTGAAGTGAAGCAGATTTGA

Coding sequence (CDS)

ATGTCTCTTGTCACAGAAGCTATCAAAGCCAAAGCTGATGAGGTCTACCATGGTGATGAGATCTGCCAAGCAAAAACGAGGGAGTTGCTCAAAGAAATGGATCTTCCCAATGGACTGTTGCCAATGAAAGACATGGAGGAATGTGGTATCATCAAGGAGACAGGGTTTGTCTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTCCAAGATATTGGGAGGCTTGTAACATATGGCAAAGAAGTTACAGCCTATGTCGAAAAAAACAAGGTTAAGAAGCTCACTGGGGTCAAGGCCAAGGAGCTCTTGATTTGGCTCTCACTCTCCGATATCTATGTCGATCACCCACCGACCGGGAAGATCACGTTCAAGGCCACGACCGGGCTGTTTCGAACTTTCCCAGTGTCGGCTTTCGAGGTTGAAGAAGATGTCGTCAAGGATGTGGAAGTGAAGAACAATAATGAGAAGGAAGTGGTGAGTGTAGCAGCTGCAGCTATTGAAGTGAAGCAGATTTGA

Protein sequence

MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLKQKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGKITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI

Homology

[Close]

BLAST of Carg11994 vs. NCBI nr
Match: XP_022946516.1 (uncharacterized protein LOC111450553 [Cucurbita moschata])

HSP 1 Score: 337.4 bits (864), Expect = 2.8e-89
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK
Sbjct: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK
Sbjct: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI 172
           ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI
Sbjct: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI 171

[Close]

BLAST of Carg11994 vs. NCBI nr
Match: XP_023545329.1 (uncharacterized protein LOC111804771 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.0 bits (855), Expect = 3.1e-88
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK
Sbjct: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVD PPTGK
Sbjct: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDDPPTGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI 172
           ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI
Sbjct: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI 171

[Close]

BLAST of Carg11994 vs. NCBI nr
Match: XP_022999308.1 (uncharacterized protein LOC111493722 [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 9.3e-85
Identity = 167/172 (97.09%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK
Sbjct: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTHKFQDIGRLVTYGKEVTAYV+KNKVKKLTGVKAKELLIWLSLSDI VD PPTGK
Sbjct: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVQKNKVKKLTGVKAKELLIWLSLSDISVDDPPTGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSV-AAAAIEVKQI 172
           ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNN EKEVVSV AAAAIEVKQI
Sbjct: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNKEKEVVSVAAAAAIEVKQI 172

[Close]

BLAST of Carg11994 vs. NCBI nr
Match: XP_008453262.1 (PREDICTED: uncharacterized protein LOC103494033 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 136/178 (76.40%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSL+TE IKAKADE+Y+GDE+CQ K+RELLKEMDLPNGLLPMKDMEECGI+KETGFVWLK
Sbjct: 1   MSLITEEIKAKADELYYGDEMCQIKSRELLKEMDLPNGLLPMKDMEECGIVKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTHKF+DI RLVTYG EVTAYVEKNKVKKLTGVKAKEL+IWL L DIYV+ PP GK
Sbjct: 61  QKKSYTHKFKDIDRLVTYGTEVTAYVEKNKVKKLTGVKAKELMIWLPLCDIYVNQPPNGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVV-------SVAAAAIEVKQI 172
           ITFK+TTGL RTFPVSAF+VEED VK V  K N             + AAAAIEVK++
Sbjct: 121 ITFKSTTGLSRTFPVSAFQVEED-VKVVGEKENXXXXXXXXXXVNGAAAAAAIEVKEV 177

[Close]

BLAST of Carg11994 vs. NCBI nr
Match: XP_022156386.1 (uncharacterized protein LOC111023292 [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 131/171 (76.61%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSLVTE IKAKADEVY+GDE CQ K++ELLKE+ LPNGLLPMKDMEECGI++ETGFVWLK
Sbjct: 1   MSLVTEEIKAKADEVYYGDEKCQEKSKELLKEVGLPNGLLPMKDMEECGIVRETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTH F+ IGRLVTY  EVTAYVE N++KKLTGVKAKELLIWL L++IYVD PPTGK
Sbjct: 61  QKKSYTHNFEKIGRLVTYATEVTAYVENNRIKKLTGVKAKELLIWLKLNEIYVDDPPTGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI 172
           ITF++ TGL R+FPVSAFEVEE+ VK+VE K   EKEVV+ A  AIEVK++
Sbjct: 121 ITFRSPTGLSRSFPVSAFEVEEE-VKEVEEK-GKEKEVVNAATTAIEVKEV 169

[Close]

BLAST of Carg11994 vs. TAIR10
Match: AT1G09310.1 (Protein of unknown function, DUF538)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-46
Identity = 92/143 (64.34%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           M LVTE ++AKA E+Y GDEIC+ KT+  LKE+ +PNGLLP+KD+EE G  +E+G VWLK
Sbjct: 1   MGLVTEEVRAKA-EMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKS THKF +I +LV+YG EVTA VE  K+KKLTGVKAKELLIW+++++IY + PPT K
Sbjct: 61  QKKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-K 120

Query: 121 ITFKATTGLFRTFPVSAFEVEED 144
           ITFK  T L RTFPV+AF V E+
Sbjct: 121 ITFKTPTTLSRTFPVTAFIVPEE 141

[Close]

BLAST of Carg11994 vs. TAIR10
Match: AT1G56580.1 (Protein of unknown function, DUF538)

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-46
Identity = 97/164 (59.15%), Postives = 121/164 (73.78%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           M LVT+ ++A+A E Y GDEIC+ KT+E LKE+ +PNGLLP+KD+EE G  +ETG VWLK
Sbjct: 1   MGLVTDEVRARA-EKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHP-PTG 120
           QKKS THKF+ IG+LV+Y  EV A VE  K+KKLTGVKAKELLIW++L+++ ++ P  +G
Sbjct: 61  QKKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSG 120

Query: 121 KITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAA 164
           KI F+  TGL RTFPVSAF V E V K    KNN   EV    A
Sbjct: 121 KINFRTPTGLSRTFPVSAFVVPE-VEKPATEKNNGTTEVKEAVA 162

[Close]

BLAST of Carg11994 vs. TAIR10
Match: AT5G46230.1 (Protein of unknown function, DUF538)

HSP 1 Score: 138.7 bits (348), Expect = 3.5e-33
Identity = 64/138 (46.38%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 5   TEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLKQKKS 64
           T++ + +  E+ +G+  C+ K +E+L  M+LP GLLP+ +M E G  K TG+VW+K K  
Sbjct: 6   TKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNK 65

Query: 65  YTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGKITFK 124
             H+F+ IGR V+Y  EVTA +E  ++ +LTG+K+KE+LIW+++S+I+V+H    +ITF 
Sbjct: 66  VQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFA 125

Query: 125 ATTGLFRTFPVSAFEVEE 143
             TGL RTFPV+AFE +E
Sbjct: 126 NPTGLSRTFPVTAFEEDE 143

[Close]

BLAST of Carg11994 vs. TAIR10
Match: AT5G49600.1 (Protein of unknown function, DUF538)

HSP 1 Score: 135.6 bits (340), Expect = 2.9e-32
Identity = 80/166 (48.19%), Postives = 112/166 (67.47%), Query Frame = 0


Query: 3   LVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWL--- 62
           +VTEA+KAKA EVYHGD+ C+ K   LL E+ LPN LL  K+++ECG +K+TGFVWL   
Sbjct: 1   MVTEAMKAKA-EVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHK 60

Query: 63  -KQKKSYTHKFQDIGR----LVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVD 122
            K+K+    ++QD+ R    +V +  EVTAY E N++KKLTGVKAKE ++W+SL +I V+
Sbjct: 61  EKKKEDQKRRYQDLLRFDNVVVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQVN 120

Query: 123 HPPTGKITFKATTGLF-RTFPVSAFE-VEEDVVKDVEVKNNNEKEV 159
              +G ITFK   GL  ++ P+S FE V  D   D ++K   +KE+
Sbjct: 121 R-SSGLITFKTEVGLLSKSLPLSVFEDVHGD---DHDLKEKPKKEL 161

[Close]

BLAST of Carg11994 vs. TAIR10
Match: AT4G24130.1 (Protein of unknown function, DUF538)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29
Identity = 55/130 (42.31%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 14  EVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLKQKKSYTHKFQDIG 73
           E+ +G E C  ++ ELL+E+  P G++P+K++ ECG ++ TG+VW+KQ   Y H F+   
Sbjct: 17  EIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYEHFFEATN 76

Query: 74  RLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGKITFKATTGLFRTF 133
             V+YG EVTAYV+K  +KK+TGVK+K++ +W+ + ++ ++ P + KI FK   G+ R+F
Sbjct: 77  TRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTPMGIGRSF 136

Query: 134 PVSAFEVEED 144
           PV+ F  EE+
Sbjct: 137 PVTGFMDEEE 146

[Close]

BLAST of Carg11994 vs. TrEMBL
Match: tr|A0A1S3BV88|A0A1S3BV88_CUCME (uncharacterized protein LOC103494033 OS=Cucumis melo OX=3656 GN=LOC103494033 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 136/178 (76.40%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSL+TE IKAKADE+Y+GDE+CQ K+RELLKEMDLPNGLLPMKDMEECGI+KETGFVWLK
Sbjct: 1   MSLITEEIKAKADELYYGDEMCQIKSRELLKEMDLPNGLLPMKDMEECGIVKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTHKF+DI RLVTYG EVTAYVEKNKVKKLTGVKAKEL+IWL L DIYV+ PP GK
Sbjct: 61  QKKSYTHKFKDIDRLVTYGTEVTAYVEKNKVKKLTGVKAKELMIWLPLCDIYVNQPPNGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVV-------SVAAAAIEVKQI 172
           ITFK+TTGL RTFPVSAF+VEED VK V  K N             + AAAAIEVK++
Sbjct: 121 ITFKSTTGLSRTFPVSAFQVEED-VKVVGEKENXXXXXXXXXXVNGAAAAAAIEVKEV 177

[Close]

BLAST of Carg11994 vs. TrEMBL
Match: tr|A0A0A0LH04|A0A0A0LH04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034670 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.4e-65
Identity = 123/144 (85.42%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSL+TE IKAKADE+Y+GDE+CQ K+RELLKEMDLPNGLLPMKDMEECGI+KETGFVWLK
Sbjct: 1   MSLITEDIKAKADELYYGDEMCQIKSRELLKEMDLPNGLLPMKDMEECGIVKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKSYTHKF+DI RLVTYG EVTAYVEKNKVKKLTGVKAKEL+IWL L DIYV+ PP GK
Sbjct: 61  QKKSYTHKFKDIDRLVTYGTEVTAYVEKNKVKKLTGVKAKELMIWLPLCDIYVNQPPNGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDV 145
           ITFK+TTGL RTFPVSAF+VEE+V
Sbjct: 121 ITFKSTTGLSRTFPVSAFQVEEEV 144

[Close]

BLAST of Carg11994 vs. TrEMBL
Match: tr|A0A0A0LTC9|A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 7.6e-59
Identity = 118/161 (73.29%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MS+VTE IK K +EVYHGDEICQ K++ELLKE+ LPNGLLP+KD+EECGII+ETGFVWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKS THKF+ IG+LV+Y  EVTA VEKNK+KKLTGVK KELLIW+SLSDIYVD PPTGK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSV 162
           ITF+   GL+RTFPVSAF+VEE  VK V  K     E V V
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEP-VKAVSEKKEQVVETVEV 193

[Close]

BLAST of Carg11994 vs. TrEMBL
Match: tr|M5W0H8|M5W0H8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G310300 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 9.9e-59
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MSLVT  IK+KADE+YHGD ICQ K+++LL E+ LPNGLLP+KDMEECG +KETGFVWLK
Sbjct: 1   MSLVTAEIKSKADELYHGDGICQEKSKKLLTEISLPNGLLPLKDMEECGYVKETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKS THKF+ IG+LV+Y  EVTAYVE  K+KKLTGVK KELL+W+SLSDIYVD PPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYAPEVTAYVENGKIKKLTGVKTKELLVWVSLSDIYVDDPPTGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEV 169
           ITFK  +GLFRTFPVSAFE EE   KDV+     +K+ V  A  A+EV
Sbjct: 121 ITFKTPSGLFRTFPVSAFENEEAANKDVK-----DKKEVKEAKGAVEV 163

[Close]

BLAST of Carg11994 vs. TrEMBL
Match: tr|A0A1S4E4L7|A0A1S4E4L7_CUCME (uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 9.9e-59
Identity = 118/171 (69.01%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MSLVTEAIKAKADEVYHGDEICQAKTRELLKEMDLPNGLLPMKDMEECGIIKETGFVWLK 60
           MS+VTE IK K +EVYHGDEICQ K++ELLKE+ LPNGLLP+KD+EECGII+ETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QKKSYTHKFQDIGRLVTYGKEVTAYVEKNKVKKLTGVKAKELLIWLSLSDIYVDHPPTGK 120
           QKKS THKF+ IG+LV+Y  EVTA VEKNK+KKLTGVK KELL+W+SLSDIYVD PPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 121 ITFKATTGLFRTFPVSAFEVEEDVVKDVEVKNNNEKEVVSVAAAAIEVKQI 172
           ITF+   GLFRTFPVSAF+VEE     V+  +  +++VV      +EVK+I
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEE----PVKAASEKKEQVV----GTVEVKEI 163

The following BLAST results are available for this feature:

BLAST of Carg11994 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946516.1	2.8e-89	100.00	uncharacterized protein LOC111450553 [Cucurbita moschata]	[more]
XP_023545329.1	3.1e-88	99.42	uncharacterized protein LOC111804771 [Cucurbita pepo subsp. pepo]	[more]
XP_022999308.1	9.3e-85	97.09	uncharacterized protein LOC111493722 [Cucurbita maxima]	[more]
XP_008453262.1	1.9e-66	76.40	PREDICTED: uncharacterized protein LOC103494033 [Cucumis melo]	[more]
XP_022156386.1	1.3e-65	76.61	uncharacterized protein LOC111023292 [Momordica charantia]	[more]

BLAST of Carg11994 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09310.1	1.2e-46	64.34	Protein of unknown function, DUF538	[more]
AT1G56580.1	1.6e-46	59.15	Protein of unknown function, DUF538	[more]
AT5G46230.1	3.5e-33	46.38	Protein of unknown function, DUF538	[more]
AT5G49600.1	2.9e-32	48.19	Protein of unknown function, DUF538	[more]
AT4G24130.1	2.3e-29	42.31	Protein of unknown function, DUF538	[more]

BLAST of Carg11994 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11994 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BV88\|A0A1S3BV88_CUCME	1.3e-66	76.40	uncharacterized protein LOC103494033 OS=Cucumis melo OX=3656 GN=LOC103494033 PE=...	[more]
tr\|A0A0A0LH04\|A0A0A0LH04_CUCSA	5.4e-65	85.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034670 PE=4 SV=1	[more]
tr\|A0A0A0LTC9\|A0A0A0LTC9_CUCSA	7.6e-59	73.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1	[more]
tr\|M5W0H8\|M5W0H8_PRUPE	9.9e-59	70.24	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G310300 PE=4 SV=1	[more]
tr\|A0A1S4E4L7\|A0A1S4E4L7_CUCME	9.9e-59	69.01	uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036758	At5g01610-like
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11994-RA	Carg11994-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 27..139 e-value: 4.3E-32 score: 110.8
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 2..155
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 8..169 e-value: 8.1E-25 score: 89.2
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 12..143
None	No IPR available	PANTHER	PTHR31676:SF10	SUBFAMILY NOT NAMED	coord: 2..155

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11994	Cla019982	Watermelon (97103) v1	carwmB0563
Carg11994	Csa2G034670	Cucumber (Chinese Long) v2	carcuB0591
Carg11994	MELO3C004171	Melon (DHL92) v3.5.1	carmeB0569
Carg11994	MELO3C015251	Melon (DHL92) v3.5.1	carmeB0567
Carg11994	ClCG02G014780	Watermelon (Charleston Gray)	carwcgB0551
Carg11994	CSPI02G04850	Wild cucumber (PI 183967)	carcpiB0596
Carg11994	Cucsa.090520	Cucumber (Gy14) v1	carcgyB0639
Carg11994	CmaCh05G010660	Cucurbita maxima (Rimu)	carcmaB0790
Carg11994	CmoCh05G010760	Cucurbita moschata (Rifu)	carcmoB0769
Carg11994	Lsi11G006490	Bottle gourd (USVL1VR-Ls)	carlsiB510
Carg11994	CsGy2G004980	Cucumber (Gy14) v2	carcgybB0566
Carg11994	MELO3C004171.2	Melon (DHL92) v3.6.1	carmedB0576
Carg11994	MELO3C015251.2	Melon (DHL92) v3.6.1	carmedB0574
Carg11994	CsaV3_2G007230	Cucumber (Chinese Long) v3	carcucB0598
Carg11994	Cla97C02G040570	Watermelon (97103) v2	carwmbB0588
Carg11994	Bhi06G001350	Wax gourd	carwgoB0672

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11994	Watermelon (97103) v2	carwmbB0589
Carg11994	Silver-seed gourd	carcarB524
Carg11994	Cucurbita maxima (Rimu)	carcmaB0784
Carg11994	Cucurbita moschata (Rifu)	carcmoB0764
Carg11994	Cucurbita pepo (Zucchini)	carcpeB0800
Carg11994	Cucurbita pepo (Zucchini)	carcpeB0805