Lsi11G006370 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G006370
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr11 : 6714659 .. 6716542 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTCTTTAACTATCCGTAGAGCTTCAAATTTCTCCCCTTTCACAGCAAACATTTACAATGCCGGATGCTGGATTCAACGAACGTTGGGACGAGAAGGACGAAGATTCAGATGGAAAATGCGCGTTCCTGGTTGTAGCTCTATGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCTTGGTAGTTTTCATTATTCTCATTGTCAAATTCCATTTGTTTTGCCACACGCCTCTTCATTCTCTGTTCCTCAAGAAAAAATGTTGATTGTTCCAACTTCAAGAACGATTAATTTTAGAAATTCCCCCTTCCTCAATCTTGATTTATTAGCTAGAGGCTTTTGCGATCTGAATAACGAGGGTTCGGATTCTGATTCTGATTCTGAAATTGAATGTGGGAAGAGTGAGGATGATTACCGTGAGTGTGATTCGAGGGCGGATTCAACCGAAGTTGATCGCGTATGCAAGGTGATTGACGAATTGTTTGCGTTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGTATAAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACGAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAACTGCAAAAGAGAGGAAGAAAGCTGTTGGGGTCTTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAATTGCTTGCTTGATAGTTTAGGGAGGGCAAAACTTGGTAAAGAAGCTCAAGTATTTTTTGAGAAGTTACACGGTAGGTTTACTCCAAATTTGCAAACGTACACTGTTTTGTTGAACGGTTGGTGTCGGGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCACAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCCAAGGGCCCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGATTTCTGTAAACAAACCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAGGGAGCGGGATGTCGGCCTGACGCTGGAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGAGCTGCTGAAAGAGATGAAAACAAATGGTTGCCCGCCTGATGGGAAGACCTACAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCCGACGATGCTGTTCGGATATACAAGAAGATGGTCGAGAATGGCATTGAACCAACAATCCACACCTACAACATGATGATGAAGTCCTACTTTCAGACGAGGAATTACGAAATGGGTGTTGCTGTTTGGGATGAGATGAAGCAAAAGGGGTGCTGCCCGGACGATAACTCATATACTGTGTTTATCGGGGGGCTCATAAGTCAGGGACGTTGCGGCGAAGCGGGAAAGTATCTAGAGGAGATGATTGACAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTAGCTCAAAAGATGAAGTTTTCTGGTAAATTTGAAGCCTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTGAAGAGAAGAAATCCTACAAACATTATCAATGGTGACCATAGCACTTGA

mRNA sequence

ATGTCTCTCTCTTTAACTATCCGTAGAGCTTCAAATTTCTCCCCTTTCACAGCAAACATTTACAATGCCGGATGCTGGATTCAACGAACGTTGGGACGAGAAGGACGAAGATTCAGATGGAAAATGCGCGTTCCTGGTTGTAGCTCTATGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCTTGGTAGTTTTCATTATTCTCATTGTCAAATTCCATTTGTTTTGCCACACGCCTCTTCATTCTCTGTTCCTCAAGAAAAAATGTTGATTGTTCCAACTTCAAGAACGATTAATTTTAGAAATTCCCCCTTCCTCAATCTTGATTTATTAGCTAGAGGCTTTTGCGATCTGAATAACGAGGGTTCGGATTCTGATTCTGATTCTGAAATTGAATGTGGGAAGAGTGAGGATGATTACCGTGAGTGTGATTCGAGGGCGGATTCAACCGAAGTTGATCGCGTATGCAAGGTGATTGACGAATTGTTTGCGTTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGTATAAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACGAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAACTGCAAAAGAGAGGAAGAAAGCTGTTGGGGTCTTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAATTGCTTGCTTGATAGTTTAGGGAGGGCAAAACTTGGTAAAGAAGCTCAAGTATTTTTTGAGAAGTTACACGGTAGGTTTACTCCAAATTTGCAAACGTACACTGTTTTGTTGAACGGTTGGTGTCGGGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCACAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCCAAGGGCCCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGATTTCTGTAAACAAACCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAGGGAGCGGGATGTCGGCCTGACGCTGGAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGAGCTGCTGAAAGAGATGAAAACAAATGGTTGCCCGCCTGATGGGAAGACCTACAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCCGACGATGCTGTTCGGATATACAAGAAGATGGTCGAGAATGGCATTGAACCAACAATCCACACCTACAACATGATGATGAAGTCCTACTTTCAGACGAGGAATTACGAAATGGGTGTTGCTGTTTGGGATGAGATGAAGCAAAAGGGGTGCTGCCCGGACGATAACTCATATACTGTGTTTATCGGGGGGCTCATAAGTCAGGGACGTTGCGGCGAAGCGGGAAAGTATCTAGAGGAGATGATTGACAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTAGCTCAAAAGATGAAGTTTTCTGGTAAATTTGAAGCCTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTGAAGAGAAGAAATCCTACAAACATTATCAATGGTGACCATAGCACTTGA

Coding sequence (CDS)

ATGTCTCTCTCTTTAACTATCCGTAGAGCTTCAAATTTCTCCCCTTTCACAGCAAACATTTACAATGCCGGATGCTGGATTCAACGAACGTTGGGACGAGAAGGACGAAGATTCAGATGGAAAATGCGCGTTCCTGGTTGTAGCTCTATGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCTTGGTAGTTTTCATTATTCTCATTGTCAAATTCCATTTGTTTTGCCACACGCCTCTTCATTCTCTGTTCCTCAAGAAAAAATGTTGATTGTTCCAACTTCAAGAACGATTAATTTTAGAAATTCCCCCTTCCTCAATCTTGATTTATTAGCTAGAGGCTTTTGCGATCTGAATAACGAGGGTTCGGATTCTGATTCTGATTCTGAAATTGAATGTGGGAAGAGTGAGGATGATTACCGTGAGTGTGATTCGAGGGCGGATTCAACCGAAGTTGATCGCGTATGCAAGGTGATTGACGAATTGTTTGCGTTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGTATAAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACGAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAACTGCAAAAGAGAGGAAGAAAGCTGTTGGGGTCTTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAATTGCTTGCTTGATAGTTTAGGGAGGGCAAAACTTGGTAAAGAAGCTCAAGTATTTTTTGAGAAGTTACACGGTAGGTTTACTCCAAATTTGCAAACGTACACTGTTTTGTTGAACGGTTGGTGTCGGGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCACAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCCAAGGGCCCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGATTTCTGTAAACAAACCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAGGGAGCGGGATGTCGGCCTGACGCTGGAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGAGCTGCTGAAAGAGATGAAAACAAATGGTTGCCCGCCTGATGGGAAGACCTACAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCCGACGATGCTGTTCGGATATACAAGAAGATGGTCGAGAATGGCATTGAACCAACAATCCACACCTACAACATGATGATGAAGTCCTACTTTCAGACGAGGAATTACGAAATGGGTGTTGCTGTTTGGGATGAGATGAAGCAAAAGGGGTGCTGCCCGGACGATAACTCATATACTGTGTTTATCGGGGGGCTCATAAGTCAGGGACGTTGCGGCGAAGCGGGAAAGTATCTAGAGGAGATGATTGACAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTAGCTCAAAAGATGAAGTTTTCTGGTAAATTTGAAGCCTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTGAAGAGAAGAAATCCTACAAACATTATCAATGGTGACCATAGCACTTGA

Protein sequence

MSLSLTIRRASNFSPFTANIYNAGCWIQRTLGREGRRFRWKMRVPGCSSMPLSRMFDSRSLGSFHYSHCQIPFVLPHASSFSVPQEKMLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHST
BLAST of Lsi11G006370 vs. Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 3.8e-212
Identity = 358/513 (69.79%), Postives = 424/513 (82.65%), Query Frame = 1

Query: 105 LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 164
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 165 ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 224
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 202

Query: 225 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 284
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 285 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 344
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 345 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 404
            MID+G KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 405 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 464
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 465 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 524
           ALIKLM N++MP+ A RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVW+EM +K
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502

Query: 525 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 584
           G CPDDNSYTV I GLI +G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 585 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 616
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

BLAST of Lsi11G006370 vs. Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 8.4e-212
Identity = 359/513 (69.98%), Postives = 422/513 (82.26%), Query Frame = 1

Query: 105 LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 164
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 82  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 141

Query: 165 ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 224
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 142 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 201

Query: 225 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 284
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 202 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 261

Query: 285 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 344
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 262 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321

Query: 345 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 404
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381

Query: 405 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 464
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441

Query: 465 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 524
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501

Query: 525 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 584
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 561

Query: 585 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 616
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 562 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

BLAST of Lsi11G006370 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 7.1e-211
Identity = 358/513 (69.79%), Postives = 421/513 (82.07%), Query Frame = 1

Query: 105 LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 164
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 165 ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 224
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAH S+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMM 202

Query: 225 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 284
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 285 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 344
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 345 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 404
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 405 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 464
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 465 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 524
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502

Query: 525 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 584
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 585 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 616
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

BLAST of Lsi11G006370 vs. Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-70
Identity = 135/443 (30.47%), Postives = 248/443 (55.98%), Query Frame = 1

Query: 148 STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 207
           S + +R+CK++ +    D  +E +L+E  +KLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 208 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 267
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 268 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKL-HGRFTPNLQTYTVLLN 327
           A+G F  M+++ +K+     N +LD+L +++   +AQ  F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 328 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 387
           GW +  NL+   ++  +M DEGF+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 388 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 447
               +  L+     + K+ +A+E+FE  + +G   +A  Y  L+  +   +RM+  Y+ +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 448 KEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQT 507
            EM+  G  P+ +TY+ ++  +   +   +A  +Y+ M     EPT+ TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 508 RNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDY 567
              +M + +WDEMK KG  P  + ++  I  L  + +  EA +Y  EM+D G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 568 NKFAADFSRAGRPDILEELAQKM 590
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

BLAST of Lsi11G006370 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-67
Identity = 142/460 (30.87%), Postives = 256/460 (55.65%), Query Frame = 1

Query: 132 CGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRNM--EAVLDECGIKLSHDLVLEVLA 191
           C KS    R   S     +V  V K I ++      +  ++ LD+ G+++S ++V +VL 
Sbjct: 49  CCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLN 108

Query: 192 RFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTM 251
           RF+ A    +RFF W+ ++  + H  + Y+MM+    K RQ++ M  L+  M +K++L +
Sbjct: 109 RFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNV 168

Query: 252 ETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEK 311
           ETF I  + +A A++  +A+  F +M+KY     +   N LL +L ++K  ++AQ  FE 
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228

Query: 312 LHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKR 371
           +  RFTP+ +TY++LL GW +  NL +A +++ +MID G  PDIV ++ M++ L +  + 
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288

Query: 372 SDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCL 431
            +A+ +   M      P    Y++LV  +  + +++EAV+ F EM+ +G + D  ++  L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348

Query: 432 ITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGI 491
           I  F    RM  VY +LKEMK+ G  P+ K+ N +++ +  +   D+A  +++KM++   
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 408

Query: 492 EPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGK 551
           EP   TY M++K + + +  E    VW  M++KG  P  ++++V I GL  +    +A  
Sbjct: 409 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 468

Query: 552 YLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKM 590
            LEEMI+ G++   + + +      +  R D+L+ L +KM
Sbjct: 469 LLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507

BLAST of Lsi11G006370 vs. TrEMBL
Match: A0A0A0LK05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034550 PE=4 SV=1)

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 564/629 (89.67%), Postives = 584/629 (92.85%), Query Frame = 1

Query: 1   MSLSL-TIRRASNFSPFTANIYNAGCWIQRTLGREGRRFRWKMRVPGCSSMPLSRMFDSR 60
           MS+SL T+ RASNFS FTA IYNAG WIQRT+GR+GRRFRWKMRVPGCSS+PL  MFDS 
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SLGSFHYSHCQIPFVLPHASSFSVPQEKMLIVPTSRTINFRNSPFLNLDLLARGFCDLNN 120
           S  SFHYSHCQIPF+LP+ASSFSVPQEK+LIV T RTI+FRN PF +LDLLARGFCDL+N
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 EGSDSDSDSEIECGKSED-DYRECDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIK 180
                DSDSEIEC KSE+ D RECD    STEV+RVCKVIDELFALDRNMEAVLDECG+K
Sbjct: 121 P----DSDSEIECEKSEEEDNRECD----STEVNRVCKVIDELFALDRNMEAVLDECGVK 180

Query: 181 LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLL 240
           LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLL
Sbjct: 181 LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLL 240

Query: 241 EEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAK 300
           EEMAEKELLTMETFT+CFKAFA AKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAK
Sbjct: 241 EEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAK 300

Query: 301 LGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNT 360
           LGKEA   FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNT
Sbjct: 301 LGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNT 360

Query: 361 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAG 420
           MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQ KMKEAV+YFEEMQGAG
Sbjct: 361 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAG 420

Query: 421 CRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAV 480
           CRPDA IYTCLITGFGNQKRMD VY LLKEMK NGCPPDGKTYNALIKLMTNKRMPDDAV
Sbjct: 421 CRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAV 480

Query: 481 RIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGL 540
           RIYKKM+ENGI+PT HTY+MMMKSYFQTRNYEMGVA WDEMK KGCCPDDNSYTVFIGGL
Sbjct: 481 RIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGL 540

Query: 541 ISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS 600
           IS GRC EAGKYLEEMI+KGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS
Sbjct: 541 ISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS 600

Query: 601 NVIARWAEMMRKRVKRRNPTNIINGDHST 628
           NVIARWAEMMRKRVKRRNPTN IN DHST
Sbjct: 601 NVIARWAEMMRKRVKRRNPTNFINDDHST 621

BLAST of Lsi11G006370 vs. TrEMBL
Match: B9I9J7_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s11650g PE=4 SV=2)

HSP 1 Score: 839.3 bits (2167), Expect = 3.0e-240
Identity = 424/592 (71.62%), Postives = 486/592 (82.09%), Query Frame = 1

Query: 32  GREGRRFRWKMRVPGCSSMPLSRMFDSRSLGSFHYSHCQIPFVLPHASS-FSVPQEKMLI 91
           G  G+  R ++ +PGCSS+P S    S       ++H QIPFV P++S+  ++ QEK+  
Sbjct: 35  GGGGQCSREQVCLPGCSSLPFSHSCCSSRDRRVGHTHGQIPFVWPYSSAPRTILQEKL-- 94

Query: 92  VPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRE-----CDSR 151
              SR +N          L  R F   +N+ +DSD++++ E  +S++  RE       S 
Sbjct: 95  ---SRILNS------TAKLSVRWFSSSSNDDTDSDAEND-ENDESDNCERENKGAIVKST 154

Query: 152 ADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWA 211
           AD  EV +VCKVIDELFALD NMEAVLDECGI LSHDLV+EVL RF+ ARKPAFRFFCWA
Sbjct: 155 ADPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWA 214

Query: 212 AQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKER 271
           A+KPGF HDS+TY+ MM IL K RQFETM+S+LEEM EK LLT++TF+I  +AFA AKER
Sbjct: 215 AEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDTFSIAMRAFAAAKER 274

Query: 272 KKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLL 331
           KKAVG+FELMK +KY+VGVETIN LLDSLGRAKLGKEAQ  F KL GRFTPNL+TYTVLL
Sbjct: 275 KKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLL 334

Query: 332 NGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPS 391
           NGWCRV+NLMEAG+IWN+M+DEGFKPDIV HN MLEGLLR KKRSDAIK FEVMKAKGPS
Sbjct: 335 NGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPS 394

Query: 392 PDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYEL 451
           PDV+SYTIL+RD CKQTKMKEAV YF EM  +GC PDA +YTCL+TG+GN KRMDMVYEL
Sbjct: 395 PDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYEL 454

Query: 452 LKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQ 511
           LKEMK  GCPPDGKTYNALIKLMT++RMPDDAVRIYKKM++NGIEP+IH+YNM+MKSYF+
Sbjct: 455 LKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFR 514

Query: 512 TRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLD 571
            RNYEMG AVWDEM +KG CPDDNSYTVFIGGLISQGR  EA KYLEEMI+KGMKAPQLD
Sbjct: 515 IRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLD 574

Query: 572 YNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNP 618
           YNKFAADFSRAG+PDILEELAQKMKFSGKFE SNV ARWAEMM+KRVKRR P
Sbjct: 575 YNKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRREP 614

BLAST of Lsi11G006370 vs. TrEMBL
Match: A0A059A8P5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03543 PE=4 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 9.9e-236
Identity = 405/537 (75.42%), Postives = 454/537 (84.54%), Query Frame = 1

Query: 94  SRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECD---------- 153
           SR +N   SP +      R FC +   G+DS+ +     G   DD  E D          
Sbjct: 10  SRAVNLAGSPRVGASC-CREFCSVEGRGADSEEEQ----GDDGDDDSEGDGVRNGGAGGE 69

Query: 154 SRADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFC 213
           +RAD  EVDRVCKVIDELFALDRNMEAVLDECG+ LSHD+V++VL RF+ ARKPAFRFFC
Sbjct: 70  TRADRAEVDRVCKVIDELFALDRNMEAVLDECGVVLSHDVVVDVLKRFRHARKPAFRFFC 129

Query: 214 WAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAK 273
           WA Q+PGFAHDS+TYN MM ILGKTRQFETMVSLLEEM  K LLTMETF I  KAFA +K
Sbjct: 130 WAGQRPGFAHDSRTYNTMMDILGKTRQFETMVSLLEEMGTKGLLTMETFMIAIKAFAASK 189

Query: 274 ERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTV 333
           ERKKAVG+FELMKKYKYKVGV+TINCLLD+LGRAKLGKEAQ+ FEKL  RFTPNL TYTV
Sbjct: 190 ERKKAVGMFELMKKYKYKVGVDTINCLLDALGRAKLGKEAQLLFEKLEERFTPNLSTYTV 249

Query: 334 LLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKG 393
           LLNGWC+VRNLMEAG++WN+MID+GF PD++AHNTMLEGLLR KKRSDAIKLFEVMKAKG
Sbjct: 250 LLNGWCKVRNLMEAGRVWNEMIDKGFTPDVIAHNTMLEGLLRSKKRSDAIKLFEVMKAKG 309

Query: 394 PSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVY 453
           P P+V+SYTI+VRD CKQ KMKEA+EYF+EM   GC+PDA IYTCLITGFGNQKRMDMV+
Sbjct: 310 PLPNVRSYTIMVRDLCKQGKMKEAIEYFDEMVNKGCQPDAPIYTCLITGFGNQKRMDMVF 369

Query: 454 ELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSY 513
            LLKEMK  GCPP G+TYN LIKL+T+++MPDDAVRIYKKMV++GIEPTIHTYNMMMKS+
Sbjct: 370 GLLKEMKEKGCPPVGRTYNTLIKLLTSQKMPDDAVRIYKKMVQSGIEPTIHTYNMMMKSF 429

Query: 514 FQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQ 573
           F TRNYEMG AVWDEM QKGCCPDDNSYTVFIGGLISQGR  EA +YLEEM++KGMKAPQ
Sbjct: 430 FITRNYEMGHAVWDEMGQKGCCPDDNSYTVFIGGLISQGRSEEACRYLEEMLEKGMKAPQ 489

Query: 574 LDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNI 621
           LDYNKFAADFSRAG+PDIL ELA+KMKFSGKFE +NV ARWAEMM KR+KRR+P  I
Sbjct: 490 LDYNKFAADFSRAGKPDILAELAKKMKFSGKFEVANVFARWAEMMNKRIKRRDPVKI 541

BLAST of Lsi11G006370 vs. TrEMBL
Match: A0A067K8Y3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14020 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 3.2e-234
Identity = 415/619 (67.04%), Postives = 490/619 (79.16%), Query Frame = 1

Query: 14  SPFTANIYNAGCWIQRTLGREGRRFRWK-MRVPGCSSMPLSRMFDSRSLGSFHYSHCQIP 73
           S F   IY+A           G+R R + + +PGCSS+P SR+F S S  S ++S+CQ+P
Sbjct: 25  SSFHGQIYSAEKLFYLQERGAGKRCRGEQVCLPGCSSLPWSRLFYSSSHRSLYHSYCQVP 84

Query: 74  FVLPHASSFSVPQEKMLIVPTSR-TINFRNSPFLNL-------DLLARGFCDLNNEGSDS 133
           F+LPH+S     QEK+ +   SR  IN   S   +        +L +RGF      G+DS
Sbjct: 85  FILPHSSPLDYLQEKLSLATKSRFIINIETSLLSSFYVQGKFSELTSRGFSCFTGGGADS 144

Query: 134 DSDSEIECGKSEDDYRECD-------SRADSTEVDRVCKVIDELFALDRNMEAVLDECGI 193
           D++S+   G ++ D  E D       S AD  EV+RVCKVIDELFALDRNMEAVLDECGI
Sbjct: 145 DAESD---GNNDSDIFENDNGGGNVKSSADPVEVNRVCKVIDELFALDRNMEAVLDECGI 204

Query: 194 KLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSL 253
            LS DLV++VL RF+ ARKPAFRFFCWA QK GFAHDS+TYN MM+IL KTRQFETM+S+
Sbjct: 205 NLSQDLVIDVLERFRHARKPAFRFFCWAGQKQGFAHDSRTYNSMMSILAKTRQFETMISM 264

Query: 254 LEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRA 313
           LEE+ EK LLTMETF+I  +AFA AKERKKAV +FELMKK+KYKVGVETIN LLDSLGR+
Sbjct: 265 LEEIGEKGLLTMETFSIAMRAFAVAKERKKAVAIFELMKKHKYKVGVETINSLLDSLGRS 324

Query: 314 KLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHN 373
           KLGKEA+V F KL GRFTPNL+TYTVLLNGWC+V+NLMEAG+IWN+MID+GFKPDIVAHN
Sbjct: 325 KLGKEAEVLFGKLIGRFTPNLKTYTVLLNGWCKVKNLMEAGRIWNEMIDKGFKPDIVAHN 384

Query: 374 TMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGA 433
            MLEGLLR KK SDA+K F VMKAKGPSPDV+SYTIL+R   KQ+KM+EA+EYF+EM  +
Sbjct: 385 IMLEGLLRSKKMSDAVKFFMVMKAKGPSPDVQSYTILIRHLGKQSKMEEAMEYFDEMIDS 444

Query: 434 GCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDA 493
           GC+PD  +YTCLITGFG QKRMDMVY+LLKEMK  GCPPDG+TYNALIKLMT+++ PDDA
Sbjct: 445 GCKPDRAVYTCLITGFGKQKRMDMVYDLLKEMKEKGCPPDGQTYNALIKLMTSRKRPDDA 504

Query: 494 VRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGG 553
           + IY KM+++G  PTIHTYNM++KSYFQT NYEMG  VWDEM  +GCC DDNSYTVFIGG
Sbjct: 505 LIIYNKMLQSGNVPTIHTYNMILKSYFQTGNYEMGRQVWDEMIGRGCCLDDNSYTVFIGG 564

Query: 554 LISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEA 613
           LISQGR GEA KYLEEM++KGMKAP LDY KF ADFSR G+PDILEELAQKMKF+GK E 
Sbjct: 565 LISQGRSGEACKYLEEMLNKGMKAPHLDYTKFVADFSRVGKPDILEELAQKMKFAGKDEV 624

Query: 614 SNVIARWAEMMRKRVKRRN 617
           SNV+A WAEMM+K+ KRR+
Sbjct: 625 SNVLASWAEMMKKKFKRRD 640

BLAST of Lsi11G006370 vs. TrEMBL
Match: A0A068TNX3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022014001 PE=4 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 2.8e-230
Identity = 409/597 (68.51%), Postives = 475/597 (79.56%), Query Frame = 1

Query: 32  GREGRRFRWKMRVPGCSSMPLSRMFDSRSLGSFHYSHCQIPFVLPHASSFSVPQEKMLI- 91
           GR G R      + G S +PLSR+  S    S   ++CQ+PF+LPH +SF   QE + + 
Sbjct: 51  GRRGGRREQNQLLNG-SPLPLSRLLHSPGDCSLRRTYCQVPFILPHPTSFFPLQENLSLP 110

Query: 92  --VPTSR-TINFRNSPFLNLDLLA---RGFCDLNN----EGSDSDSDSEIECGKSEDDYR 151
             +P    + N   S   NL       R FC + +    + S+SD +SE+E   + D   
Sbjct: 111 LGLPRKAGSFNSTASIVANLSNNRHQFRRFCSITDCEFEDFSNSDVESELE---NSDIAE 170

Query: 152 ECDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFR 211
              S AD  EVDRVCKVIDELF LDRNMEAVLDE GI LSHDLV++VL RFK ARKPAFR
Sbjct: 171 SVKSEADPNEVDRVCKVIDELFTLDRNMEAVLDESGINLSHDLVVDVLERFKHARKPAFR 230

Query: 212 FFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFA 271
           FFCWA+++  +AHDS+TYN MM ILGKTRQFETMVSLLEEM EK LLTMETF I  KAF 
Sbjct: 231 FFCWASRRSDYAHDSRTYNAMMNILGKTRQFETMVSLLEEMGEKGLLTMETFIISMKAFV 290

Query: 272 TAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQT 331
            AKERKKA+G+FELMKKYK+KVGVETINCLLD++GRAKLGKEAQ+ FEKL  RFTPNL+T
Sbjct: 291 AAKERKKAIGMFELMKKYKFKVGVETINCLLDAMGRAKLGKEAQILFEKLEHRFTPNLRT 350

Query: 332 YTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMK 391
           YTVLLNGWCRV+NLMEAGK+WN+MIDEGFKPDIVAHNTMLEGLL+  ++SDAIKLFEVMK
Sbjct: 351 YTVLLNGWCRVKNLMEAGKVWNEMIDEGFKPDIVAHNTMLEGLLKGHRKSDAIKLFEVMK 410

Query: 392 AKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMD 451
           AKGP+P+V+SYTIL+RD CKQ KM+EA +YF+EM  +GC PDAG YTCLITG+GN+K+MD
Sbjct: 411 AKGPAPNVRSYTILMRDLCKQRKMREAADYFDEMIRSGCEPDAGAYTCLITGYGNEKKMD 470

Query: 452 MVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMM 511
            VY LLKEMK  G PPD + YNALIKLM N++MPDDAVRIYKKM++NGI+PTIHT+NMMM
Sbjct: 471 KVYSLLKEMKEKGYPPDARMYNALIKLMANRQMPDDAVRIYKKMIQNGIQPTIHTFNMMM 530

Query: 512 KSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMK 571
           KS F TRNY MG AVW+EM +KGCCPD+NSY V I GLI  GR  EA K+LEEMI KGMK
Sbjct: 531 KSSFLTRNYNMGHAVWEEMNRKGCCPDENSYVVMIRGLIRHGRSVEACKFLEEMIAKGMK 590

Query: 572 APQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNP 618
           APQLDYNKFAADFSRAG+PD+LEELAQKMKFSGKF  SN+ ARWAEMM+KRVKRR+P
Sbjct: 591 APQLDYNKFAADFSRAGKPDVLEELAQKMKFSGKFADSNLFARWAEMMKKRVKRRDP 643

BLAST of Lsi11G006370 vs. TAIR10
Match: AT3G62470.1 (AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 739.2 bits (1907), Expect = 2.1e-213
Identity = 358/513 (69.79%), Postives = 424/513 (82.65%), Query Frame = 1

Query: 105 LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 164
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 165 ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 224
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 202

Query: 225 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 284
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 285 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 344
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 345 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 404
            MID+G KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 405 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 464
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 465 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 524
           ALIKLM N++MP+ A RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVW+EM +K
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502

Query: 525 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 584
           G CPDDNSYTV I GLI +G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 585 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 616
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

BLAST of Lsi11G006370 vs. TAIR10
Match: AT5G14820.1 (AT5G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 738.0 bits (1904), Expect = 4.7e-213
Identity = 359/513 (69.98%), Postives = 422/513 (82.26%), Query Frame = 1

Query: 105 LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 164
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 82  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 141

Query: 165 ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 224
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 142 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 201

Query: 225 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 284
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 202 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 261

Query: 285 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 344
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 262 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321

Query: 345 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 404
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381

Query: 405 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 464
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441

Query: 465 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 524
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501

Query: 525 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 584
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 561

Query: 585 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 616
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 562 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

BLAST of Lsi11G006370 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 734.9 bits (1896), Expect = 4.0e-212
Identity = 358/513 (69.79%), Postives = 421/513 (82.07%), Query Frame = 1

Query: 105 LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 164
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 165 ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 224
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAH S+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMM 202

Query: 225 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 284
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 285 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 344
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 345 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 404
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 405 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 464
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 465 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 524
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502

Query: 525 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 584
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 585 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 616
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

BLAST of Lsi11G006370 vs. TAIR10
Match: AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 269.2 bits (687), Expect = 6.2e-72
Identity = 135/443 (30.47%), Postives = 248/443 (55.98%), Query Frame = 1

Query: 148 STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 207
           S + +R+CK++ +    D  +E +L+E  +KLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 208 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 267
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 268 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKL-HGRFTPNLQTYTVLLN 327
           A+G F  M+++ +K+     N +LD+L +++   +AQ  F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 328 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 387
           GW +  NL+   ++  +M DEGF+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 388 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 447
               +  L+     + K+ +A+E+FE  + +G   +A  Y  L+  +   +RM+  Y+ +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 448 KEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQT 507
            EM+  G  P+ +TY+ ++  +   +   +A  +Y+ M     EPT+ TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 508 RNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDY 567
              +M + +WDEMK KG  P  + ++  I  L  + +  EA +Y  EM+D G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 568 NKFAADFSRAGRPDILEELAQKM 590
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

BLAST of Lsi11G006370 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 1.4e-68
Identity = 142/460 (30.87%), Postives = 256/460 (55.65%), Query Frame = 1

Query: 132 CGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRNM--EAVLDECGIKLSHDLVLEVLA 191
           C KS    R   S     +V  V K I ++      +  ++ LD+ G+++S ++V +VL 
Sbjct: 49  CCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLN 108

Query: 192 RFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTM 251
           RF+ A    +RFF W+ ++  + H  + Y+MM+    K RQ++ M  L+  M +K++L +
Sbjct: 109 RFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNV 168

Query: 252 ETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEK 311
           ETF I  + +A A++  +A+  F +M+KY     +   N LL +L ++K  ++AQ  FE 
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228

Query: 312 LHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKR 371
           +  RFTP+ +TY++LL GW +  NL +A +++ +MID G  PDIV ++ M++ L +  + 
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288

Query: 372 SDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCL 431
            +A+ +   M      P    Y++LV  +  + +++EAV+ F EM+ +G + D  ++  L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348

Query: 432 ITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGI 491
           I  F    RM  VY +LKEMK+ G  P+ K+ N +++ +  +   D+A  +++KM++   
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 408

Query: 492 EPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGK 551
           EP   TY M++K + + +  E    VW  M++KG  P  ++++V I GL  +    +A  
Sbjct: 409 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 468

Query: 552 YLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKM 590
            LEEMI+ G++   + + +      +  R D+L+ L +KM
Sbjct: 469 LLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507

BLAST of Lsi11G006370 vs. NCBI nr
Match: gi|659070107|ref|XP_008453445.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 565/627 (90.11%), Postives = 589/627 (93.94%), Query Frame = 1

Query: 1   MSLSL-TIRRASNFSPFTANIYNAGCWIQRTLGREGRRFRWKMRVPGCSSMPLSRMFDSR 60
           MSLSL T+RRASNFS FTA IYNAG  IQRT+GR+GRRFRWKMR+PGCSS+PL  MFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SLGSFHYSHCQIPFVLPHASSFSVPQEKMLIVPTSRTINFRNSPFLNLDLLARGFCDLNN 120
           S  SFH SHCQIPF+LP+ASSFSVPQEK+L VP SRTI+FRN  F +LDLLARG+CDLNN
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 EGSDSDSDSEIECGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIKL 180
               SDSDSEIEC KSEDD RECDSR DSTEVDRVCKVIDELFALDRNMEAVLDECG++L
Sbjct: 121 ----SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVEL 180

Query: 181 SHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLE 240
           +HDLVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILG+TRQFETMVSLLE
Sbjct: 181 THDLVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLE 240

Query: 241 EMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKL 300
           EMAEKELLTMETFTICFKAFA AKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKL
Sbjct: 241 EMAEKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKL 300

Query: 301 GKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTM 360
           GKEA   FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTM
Sbjct: 301 GKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTM 360

Query: 361 LEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGC 420
           LEGLLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQGAGC
Sbjct: 361 LEGLLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGC 420

Query: 421 RPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVR 480
           RPD  IYTCLITGFGNQKRMDMVY LLKEM+ NGCPPDGKTYNALIKLMTNKRMPDDAVR
Sbjct: 421 RPDVAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVR 480

Query: 481 IYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLI 540
           IYKKM+ENG EPTIHTY+MMMKSYFQTRNYEMGVA W+EMK+KGCCPDDN YTVFIGGLI
Sbjct: 481 IYKKMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLI 540

Query: 541 SQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASN 600
           S GRC EAGKYLEEMI+KGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+
Sbjct: 541 SLGRCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASS 600

Query: 601 VIARWAEMMRKRVKRRNPTNIINGDHS 627
           VIARWAEMMRKRVKRRNPTN INGDHS
Sbjct: 601 VIARWAEMMRKRVKRRNPTNFINGDHS 623

BLAST of Lsi11G006370 vs. NCBI nr
Match: gi|449454008|ref|XP_004144748.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 564/629 (89.67%), Postives = 584/629 (92.85%), Query Frame = 1

Query: 1   MSLSL-TIRRASNFSPFTANIYNAGCWIQRTLGREGRRFRWKMRVPGCSSMPLSRMFDSR 60
           MS+SL T+ RASNFS FTA IYNAG WIQRT+GR+GRRFRWKMRVPGCSS+PL  MFDS 
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SLGSFHYSHCQIPFVLPHASSFSVPQEKMLIVPTSRTINFRNSPFLNLDLLARGFCDLNN 120
           S  SFHYSHCQIPF+LP+ASSFSVPQEK+LIV T RTI+FRN PF +LDLLARGFCDL+N
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 EGSDSDSDSEIECGKSED-DYRECDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIK 180
                DSDSEIEC KSE+ D RECD    STEV+RVCKVIDELFALDRNMEAVLDECG+K
Sbjct: 121 P----DSDSEIECEKSEEEDNRECD----STEVNRVCKVIDELFALDRNMEAVLDECGVK 180

Query: 181 LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLL 240
           LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLL
Sbjct: 181 LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLL 240

Query: 241 EEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAK 300
           EEMAEKELLTMETFT+CFKAFA AKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAK
Sbjct: 241 EEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAK 300

Query: 301 LGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNT 360
           LGKEA   FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNT
Sbjct: 301 LGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNT 360

Query: 361 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAG 420
           MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQ KMKEAV+YFEEMQGAG
Sbjct: 361 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAG 420

Query: 421 CRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAV 480
           CRPDA IYTCLITGFGNQKRMD VY LLKEMK NGCPPDGKTYNALIKLMTNKRMPDDAV
Sbjct: 421 CRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAV 480

Query: 481 RIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGL 540
           RIYKKM+ENGI+PT HTY+MMMKSYFQTRNYEMGVA WDEMK KGCCPDDNSYTVFIGGL
Sbjct: 481 RIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGL 540

Query: 541 ISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS 600
           IS GRC EAGKYLEEMI+KGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS
Sbjct: 541 ISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS 600

Query: 601 NVIARWAEMMRKRVKRRNPTNIINGDHST 628
           NVIARWAEMMRKRVKRRNPTN IN DHST
Sbjct: 601 NVIARWAEMMRKRVKRRNPTNFINDDHST 621

BLAST of Lsi11G006370 vs. NCBI nr
Match: gi|657989076|ref|XP_008386723.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Malus domestica])

HSP 1 Score: 847.4 bits (2188), Expect = 1.6e-242
Identity = 426/592 (71.96%), Postives = 491/592 (82.94%), Query Frame = 1

Query: 32  GREGR-RFRWKMRVPGCSSMPLSRMFDSRSLGSFHYSHCQIPFVLPHASSFSVPQEKMLI 91
           GRE R R R ++ +P   S+PLS +  S      ++SHCQIPF+LPH +S  + QEK+L 
Sbjct: 46  GRERRHRRREQVCLPSGCSLPLSGLLHSSPRRYLYHSHCQIPFLLPHPTSLFILQEKLLT 105

Query: 92  VPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRE----CDSRA 151
             TS TI    +  + ++   RGF      GSDS ++++     SED+ R       S A
Sbjct: 106 --TSITIPNFTTSXVGIECGLRGFSSATAGGSDSGAETD-----SEDEDRRGSVHVSSSA 165

Query: 152 DSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAA 211
           D  EVDRVCKVIDELFALDRNMEAVLDECGI+LSHDLV+ VL RF+ ARKPAFRFFCWA 
Sbjct: 166 DPEEVDRVCKVIDELFALDRNMEAVLDECGIQLSHDLVVAVLKRFQHARKPAFRFFCWAG 225

Query: 212 QKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERK 271
           QKPGF+HDS+TYN MM ILGKTRQFETMVSLLEEM  KELLTM TF I FKAFA AKERK
Sbjct: 226 QKPGFSHDSRTYNSMMXILGKTRQFETMVSLLEEMGVKELLTMXTFVIAFKAFAAAKERK 285

Query: 272 KAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLN 331
           KAVG+FELMK YK+KVG++TINCLLD+LGRAKLGKE Q+ FEKL GRFTPNLQTYTVLLN
Sbjct: 286 KAVGIFELMKSYKFKVGIDTINCLLDTLGRAKLGKEMQLLFEKLKGRFTPNLQTYTVLLN 345

Query: 332 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 391
           GWC  +NLMEAG++WN+M+D+GFKPDIVA+NTML GLLR  KRSDAIKLFEVMKAKGPSP
Sbjct: 346 GWCSSKNLMEAGRVWNEMVDKGFKPDIVAYNTMLGGLLRGHKRSDAIKLFEVMKAKGPSP 405

Query: 392 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 451
           +V+SY+IL++DFCKQ KMKEAV+ F EM+ +GC+PD  +YTCLITGFGNQK+M+ VYELL
Sbjct: 406 NVRSYSILIQDFCKQKKMKEAVDSFYEMRESGCQPDVAVYTCLITGFGNQKKMETVYELL 465

Query: 452 KEMKTNGCPPDGKTYNALIKLM-TNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQ 511
           KEMK  GC PDG+TYNALIK+M T +RMPDDAVRIYKKM++NG+EP+IHT+NM+MKSYFQ
Sbjct: 466 KEMKETGCTPDGRTYNALIKVMTTQQRMPDDAVRIYKKMIQNGVEPSIHTFNMIMKSYFQ 525

Query: 512 TRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLD 571
           TRNY+MG AVWDEM QKG CPDDNSYTV IGGLISQGR GEA KYLEEM++KGMK PQLD
Sbjct: 526 TRNYDMGCAVWDEMIQKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMVEKGMKPPQLD 585

Query: 572 YNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNP 618
            NKFAADFSRAG+PDILEELAQKMKFSGKFE SNV ARWAEMM+KRVKRR+P
Sbjct: 586 LNKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRRDP 630

BLAST of Lsi11G006370 vs. NCBI nr
Match: gi|743791425|ref|XP_011041294.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Populus euphratica])

HSP 1 Score: 842.8 bits (2176), Expect = 3.9e-241
Identity = 425/602 (70.60%), Postives = 487/602 (80.90%), Query Frame = 1

Query: 32  GREGRRFRWKMRVPGCSSMPLSRMFDSRSLGSFHYSHCQIPFVLPHASS-FSVPQEKMLI 91
           G  G+  R ++ +PGCSS+P S    S       ++H QIPFV P+ S+  ++ QEK+ +
Sbjct: 56  GGGGQCSREQVCLPGCSSLPFSHSCCSSCDRRVSHTHGQIPFVWPYPSAPRTILQEKLSL 115

Query: 92  VPTSRTINFRNSPFLNL--------DLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRE- 151
           +  S   N   +  L          +L  R F   +N+ +DSD+++E E  +S+   RE 
Sbjct: 116 ILNSTASNKSKTSLLPSFTILGKVSELSVRWFSSSSNDDTDSDAENE-ENDESDTCEREN 175

Query: 152 ----CDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKP 211
                 S AD  EV +VCKVIDELFALD NMEAVLDECGI LSHDLV+EVL RF+ ARKP
Sbjct: 176 KGAIVKSTADPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKP 235

Query: 212 AFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFK 271
           AFRFFCWAA+KPGF HDS+TY+ MM IL K RQFETM+S+LEEM EK LLT++TF+I  +
Sbjct: 236 AFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDTFSIALR 295

Query: 272 AFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPN 331
           AFA AKERKKAVG+FELMK +KY+VGVETIN LLDSLGRAKLGKEAQ  F KL GRFTPN
Sbjct: 296 AFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPN 355

Query: 332 LQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFE 391
           L+TYTVLLNGWCRV+NLMEAG+IWN+M+DEGFKPD+V HN MLEGLLR KKRSDAIK FE
Sbjct: 356 LRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDVVTHNIMLEGLLRSKKRSDAIKFFE 415

Query: 392 VMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQK 451
           VMK+KGPSPDV+SYTIL+RD CKQTKMKEAV YF EM   GC PDA +YTCL+TG+GN K
Sbjct: 416 VMKSKGPSPDVRSYTILIRDLCKQTKMKEAVGYFHEMVDFGCHPDAAVYTCLMTGYGNHK 475

Query: 452 RMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYN 511
           RMDMVYELLKEMK  GCPPDGKTYNALIKLMT++RMPDDAVRIYKKM++NGIEP+IH+YN
Sbjct: 476 RMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYN 535

Query: 512 MMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDK 571
           M+MKSYFQ RNYEMG AVWDEM +KG CPDDNSYTVFIGGLISQGR  EA KYLEEMI+K
Sbjct: 536 MIMKSYFQIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEK 595

Query: 572 GMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNP 620
           GMKAPQLDYNKFAADFSRAG+PDILEELAQKMKFSGKFE SNV ARWAEMM+KRVKRR P
Sbjct: 596 GMKAPQLDYNKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRREP 655

BLAST of Lsi11G006370 vs. NCBI nr
Match: gi|566203812|ref|XP_002320305.2| (hypothetical protein POPTR_0014s11650g, partial [Populus trichocarpa])

HSP 1 Score: 839.3 bits (2167), Expect = 4.3e-240
Identity = 424/592 (71.62%), Postives = 486/592 (82.09%), Query Frame = 1

Query: 32  GREGRRFRWKMRVPGCSSMPLSRMFDSRSLGSFHYSHCQIPFVLPHASS-FSVPQEKMLI 91
           G  G+  R ++ +PGCSS+P S    S       ++H QIPFV P++S+  ++ QEK+  
Sbjct: 35  GGGGQCSREQVCLPGCSSLPFSHSCCSSRDRRVGHTHGQIPFVWPYSSAPRTILQEKL-- 94

Query: 92  VPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRE-----CDSR 151
              SR +N          L  R F   +N+ +DSD++++ E  +S++  RE       S 
Sbjct: 95  ---SRILNS------TAKLSVRWFSSSSNDDTDSDAEND-ENDESDNCERENKGAIVKST 154

Query: 152 ADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWA 211
           AD  EV +VCKVIDELFALD NMEAVLDECGI LSHDLV+EVL RF+ ARKPAFRFFCWA
Sbjct: 155 ADPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWA 214

Query: 212 AQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKER 271
           A+KPGF HDS+TY+ MM IL K RQFETM+S+LEEM EK LLT++TF+I  +AFA AKER
Sbjct: 215 AEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDTFSIAMRAFAAAKER 274

Query: 272 KKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLL 331
           KKAVG+FELMK +KY+VGVETIN LLDSLGRAKLGKEAQ  F KL GRFTPNL+TYTVLL
Sbjct: 275 KKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLL 334

Query: 332 NGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPS 391
           NGWCRV+NLMEAG+IWN+M+DEGFKPDIV HN MLEGLLR KKRSDAIK FEVMKAKGPS
Sbjct: 335 NGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPS 394

Query: 392 PDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYEL 451
           PDV+SYTIL+RD CKQTKMKEAV YF EM  +GC PDA +YTCL+TG+GN KRMDMVYEL
Sbjct: 395 PDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYEL 454

Query: 452 LKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQ 511
           LKEMK  GCPPDGKTYNALIKLMT++RMPDDAVRIYKKM++NGIEP+IH+YNM+MKSYF+
Sbjct: 455 LKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFR 514

Query: 512 TRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLD 571
            RNYEMG AVWDEM +KG CPDDNSYTVFIGGLISQGR  EA KYLEEMI+KGMKAPQLD
Sbjct: 515 IRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLD 574

Query: 572 YNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNP 618
           YNKFAADFSRAG+PDILEELAQKMKFSGKFE SNV ARWAEMM+KRVKRR P
Sbjct: 575 YNKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRREP 614

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP293_ARATH3.8e-21269.79Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
PP382_ARATH8.4e-21269.98Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
PP294_ARATH7.1e-21169.79Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
PP112_ARATH1.1e-7030.47Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
PP129_ARATH2.5e-6730.87Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LK05_CUCSA0.0e+0089.67Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034550 PE=4 SV=1[more]
B9I9J7_POPTR3.0e-24071.62Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s11650g P... [more]
A0A059A8P5_EUCGR9.9e-23675.42Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03543 PE=4 SV=1[more]
A0A067K8Y3_JATCU3.2e-23467.04Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14020 PE=4 SV=1[more]
A0A068TNX3_COFCA2.8e-23068.51Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022014001 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G62470.12.1e-21369.79 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.14.7e-21369.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.14.0e-21269.79 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G71060.16.2e-7230.47 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G77360.11.4e-6830.87 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659070107|ref|XP_008453445.1|0.0e+0090.11PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-... [more]
gi|449454008|ref|XP_004144748.1|0.0e+0089.67PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-... [more]
gi|657989076|ref|XP_008386723.1|1.6e-24271.96PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g... [more]
gi|743791425|ref|XP_011041294.1|3.9e-24170.60PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-... [more]
gi|566203812|ref|XP_002320305.2|4.3e-24071.62hypothetical protein POPTR_0014s11650g, partial [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G006370.1Lsi11G006370.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 320..349
score: 2.9E-4coord: 217..244
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 491..538
score: 7.5E-13coord: 351..400
score: 2.5E-13coord: 425..466
score: 2.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 354..388
score: 8.4E-5coord: 460..492
score: 3.8E-8coord: 494..527
score: 1.8E-10coord: 320..353
score: 1.5E-7coord: 390..423
score: 8.6E-7coord: 217..244
score: 6.9E-5coord: 425..457
score: 7.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 214..248
score: 9.514coord: 352..386
score: 10.874coord: 457..491
score: 12.222coord: 283..313
score: 6.127coord: 422..456
score: 11.301coord: 562..596
score: 5.601coord: 527..561
score: 9.251coord: 492..526
score: 11.904coord: 387..421
score: 12.2coord: 317..351
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 454..522
score: 1.4E-6coord: 355..417
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 72..603
score: 2.3E
NoneNo IPR availablePANTHERPTHR24015:SF429SUBFAMILY NOT NAMEDcoord: 72..603
score: 2.3E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 400..569
score: 1.

The following gene(s) are paralogous to this gene:

None