Carg23255 (gene) Silver-seed gourd

Overview
NameCarg23255
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionpentatricopeptide repeat-containing protein At3g62470, mitochondrial-like
LocationCucurbita_argyrosperma_scaffold_231 : 6847 .. 9148 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTCTCTAACTTTCCGTAGATTTTCAAATTTCTCAGCATTCCCACCTACCATTTCCAATGCCGCCTGTCAGATTCGACGATCCTTGGGACGAGAAGGACGAAGTTTCAGAGGGAAAATGCGCGTTCCCCGTTGTAGCTCTCTGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCATGGTAGTTTTCATTCTTCTCTTTGTCAAATTCCATTTATATTGCCACACGCCTCTTCATTCTTTGTTCCTCAAGAAACAATGTTGATTGCTACGAGTTCCCGAACGATTAATTTCAGAAATCCCCCTTTCCCCTGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCGAAATTCGCATTCGGATTCTGAAATTGAATATGAGATTAGTGAGGATGATGATCGTGAGAGTGATTCTAGGGCAAATCCGATCGAAGTTGATCGTGTATGCAAGGTGCTCGACGAATTGTTTGCTTTAGATAGAAATATGGAGGCTGTTCTTGATGAGTGTAGTATCATATTGTCTCACGATCTGGTTTTGAATGTCTTGGAAAGATTCAAACAAGCTCGTAAACCTGCATTTAGATTCTTCTGTTGGGCTGCTCATAAACCAGGATTTTCCCATGATTCCAAAACTTATAATATGATGATGACAATCTTGGGGAAGACGAGGCAGTTTGAAACCATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAATCCTTTGCAGCTGCAAAAGAGAGAAGGAAAGCCATTGGGATCTTTGAATTGATGAAGAAGTATAAATATAAAGTTGGTGTAGAAACTATAAACTGTTTGCTTGATAGTCTAGGCAGGGCAAAGCTTGGTAAAGAAGCTCAAGCCGTTTTCGAGAAGTTGTGTGGTCGGTTTACGCCGAATTTGCAGACGTACACGGTTTTGTTGAACGGTTGGTGTCGGGTTAGGAATCTAATGGAGGCTGGGAAGATATGGAATCTGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGTTTGTTGAGATGTAAGAAGAGGTCAGATGCTATCAAGCTGTTTGAGGTTATGAAAGCGAAAGGCCCGTCTCCTGACGTTAAAAGCTACACGATCTTGGTTCGAGATTTCTGTAAACAAAACAAGATGAAAGAAGCAGTTGAGTATTTCGAAGAAATGCAGGCGGCGGGATGTCGACCCGACACTGGAATCTATACATGTTTGATCACAGGGTTTGGGAATCAAAGAAGAATGGACATGATTTATGGGATACTAAAAGAGATGAAAACAAATGGTTGCCCACCTGATGGGAAGACCTATAATTCTCTGATCAAGTTGATGACGAACAGGCGAATGCCCGACGATGCTGGTCGGATATACAACAAGATGATTGAAAGCGGTATTAAACCAACGATCCACACGTACAACATGATGATGAAGTCCTACTTTCAAACAAGGAACTATGAAATGGGTGTTTTTGTTTGGGATGAAATGAAGCAAAAGGGGTGCTGCCCGGATGATAACTCGTACACCGTGTTCATCGGAGGGCTCATAAGTCATGGACGATGCAACGAAGCAGGTAAGTATCTCGAGGAAATGATCGAGAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGAAGACCTGACATTCTTGAAGAATTAGCTCAAAAACTGAAATTCTCTGGTAAATTTGAAGCATCCAATGTGATTGCACGATGGGCTGAGATGATGAGGAAGAGAGTCAAGAGAAGAACACCTACGAACATTGTCAATGCTGATCATAGCAACCGACTGATACACGATGAACACTATTTTTCGGTCCGTCGATGAGCGGGAAAACTCGAACCTTTGACCTGCCAATCGACGGTATATACCTATGTCGACGTCGGTCGGGCTATGCTCTGGTTGATTAGTCTATCCATTGAGTACTGTATTTTAACAGCAGACTATAAATTTATTAGAATTTCAGCTTGATTTATTTCACATCAGTTTGATATTAATTCTGTTTTGCTTAGAGAATTTTTTCTGATGCAGCAGGTTTTGTGGATGAGATCAACGGCCATAAAAAACCGAAGAGATTACTCGGGTAATTTTTCTCGATCTTTTAGTCGAAGATATAATCTTATCCGATCCAAAATTTTTAAGTATGTTGTTGAATTTTTTCTATTATATATTTACTTGAAAACTCTTAGTAGTTTTGTATCCCGGGGATTTTCGTCACTAA

mRNA sequence

ATGTCTCTCTCTCTAACTTTCCGTAGATTTTCAAATTTCTCAGCATTCCCACCTACCATTTCCAATGCCGCCTGTCAGATTCGACGATCCTTGGGACGAGAAGGACGAAGTTTCAGAGGGAAAATGCGCGTTCCCCGTTGTAGCTCTCTGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCATGGTAGTTTTCATTCTTCTCTTTGTCAAATTCCATTTATATTGCCACACGCCTCTTCATTCTTTGTTCCTCAAGAAACAATGTTGATTGCTACGAGTTCCCGAACGATTAATTTCAGAAATCCCCCTTTCCCCTGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCGAAATTCGCATTCGGATTCTGAAATTGAATATGAGATTAGTGAGGATGATGATCGTGAGAGTGATTCTAGGGCAAATCCGATCGAAGTTGATCGTGTATGCAAGGTGCTCGACGAATTGTTTGCTTTAGATAGAAATATGGAGGCTGTTCTTGATGAGTGTAGTATCATATTGTCTCACGATCTGGTTTTGAATGTCTTGGAAAGATTCAAACAAGCTCGTAAACCTGCATTTAGATTCTTCTGTTGGGCTGCTCATAAACCAGGATTTTCCCATGATTCCAAAACTTATAATATGATGATGACAATCTTGGGGAAGACGAGGCAGTTTGAAACCATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAATCCTTTGCAGCTGCAAAAGAGAGAAGGAAAGCCATTGGGATCTTTGAATTGATGAAGAAGTATAAATATAAAGTTGGTGTAGAAACTATAAACTGTTTGCTTGATAGTCTAGGCAGGGCAAAGCTTGGTAAAGAAGCTCAAGCCGTTTTCGAGAAGTTGTGTGGTCGGTTTACGCCGAATTTGCAGACGTACACGGTTTTGTTGAACGGTTGGTGTCGGGTTAGGAATCTAATGGAGGCTGGGAAGATATGGAATCTGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGTTTGTTGAGATGTAAGAAGAGGTCAGATGCTATCAAGCTGTTTGAGGTTATGAAAGCGAAAGGCCCGTCTCCTGACGTTAAAAGCTACACGATCTTGGTTCGAGATTTCTGTAAACAAAACAAGATGAAAGAAGCAGTTGAGTATTTCGAAGAAATGCAGGCGGCGGGATGTCGACCCGACACTGGAATCTATACATGTTTGATCACAGGGTTTGGGAATCAAAGAAGAATGGACATGATTTATGGGATACTAAAAGAGATGAAAACAAATGGTTGCCCACCTGATGGGAAGACCTATAATTCTCTGATCAAGTTGATGACGAACAGGCGAATGCCCGACGATGCTGGTCGGATATACAACAAGATGATTGAAAGCGGTATTAAACCAACGATCCACACGTACAACATGATGATGAAGTCCTACTTTCAAACAAGGAACTATGAAATGGGTGTTTTTGTTTGGGATGAAATGAAGCAAAAGGGGTGCTGCCCGGATGATAACTCGTACACCGTGTTCATCGGAGGGCTCATAAGTCATGGACGATGCAACGAAGCAGGTAAGTATCTCGAGGAAATGATCGAGAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGAAGACCTGACATTCTTGAAGAATTAGCTCAAAAACTGAAATTCTCTGGTAAATTTGAAGCATCCAATGTGATTGCACGATGGGCTGAGATGATGAGGAAGAGAGTCAAGAGAAGAACACCTACGAACATTGTCAATGCTGATCATAGCAACCGACTGATACACGATGAACACTATTTTTCGGTTTTGTGGATGAGATCAACGGCCATAAAAAACCGAAGAGATTACTCGGTTTTGTATCCCGGGGATTTTCGTCACTAA

Coding sequence (CDS)

ATGTCTCTCTCTCTAACTTTCCGTAGATTTTCAAATTTCTCAGCATTCCCACCTACCATTTCCAATGCCGCCTGTCAGATTCGACGATCCTTGGGACGAGAAGGACGAAGTTTCAGAGGGAAAATGCGCGTTCCCCGTTGTAGCTCTCTGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCATGGTAGTTTTCATTCTTCTCTTTGTCAAATTCCATTTATATTGCCACACGCCTCTTCATTCTTTGTTCCTCAAGAAACAATGTTGATTGCTACGAGTTCCCGAACGATTAATTTCAGAAATCCCCCTTTCCCCTGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCGAAATTCGCATTCGGATTCTGAAATTGAATATGAGATTAGTGAGGATGATGATCGTGAGAGTGATTCTAGGGCAAATCCGATCGAAGTTGATCGTGTATGCAAGGTGCTCGACGAATTGTTTGCTTTAGATAGAAATATGGAGGCTGTTCTTGATGAGTGTAGTATCATATTGTCTCACGATCTGGTTTTGAATGTCTTGGAAAGATTCAAACAAGCTCGTAAACCTGCATTTAGATTCTTCTGTTGGGCTGCTCATAAACCAGGATTTTCCCATGATTCCAAAACTTATAATATGATGATGACAATCTTGGGGAAGACGAGGCAGTTTGAAACCATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAATCCTTTGCAGCTGCAAAAGAGAGAAGGAAAGCCATTGGGATCTTTGAATTGATGAAGAAGTATAAATATAAAGTTGGTGTAGAAACTATAAACTGTTTGCTTGATAGTCTAGGCAGGGCAAAGCTTGGTAAAGAAGCTCAAGCCGTTTTCGAGAAGTTGTGTGGTCGGTTTACGCCGAATTTGCAGACGTACACGGTTTTGTTGAACGGTTGGTGTCGGGTTAGGAATCTAATGGAGGCTGGGAAGATATGGAATCTGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGTTTGTTGAGATGTAAGAAGAGGTCAGATGCTATCAAGCTGTTTGAGGTTATGAAAGCGAAAGGCCCGTCTCCTGACGTTAAAAGCTACACGATCTTGGTTCGAGATTTCTGTAAACAAAACAAGATGAAAGAAGCAGTTGAGTATTTCGAAGAAATGCAGGCGGCGGGATGTCGACCCGACACTGGAATCTATACATGTTTGATCACAGGGTTTGGGAATCAAAGAAGAATGGACATGATTTATGGGATACTAAAAGAGATGAAAACAAATGGTTGCCCACCTGATGGGAAGACCTATAATTCTCTGATCAAGTTGATGACGAACAGGCGAATGCCCGACGATGCTGGTCGGATATACAACAAGATGATTGAAAGCGGTATTAAACCAACGATCCACACGTACAACATGATGATGAAGTCCTACTTTCAAACAAGGAACTATGAAATGGGTGTTTTTGTTTGGGATGAAATGAAGCAAAAGGGGTGCTGCCCGGATGATAACTCGTACACCGTGTTCATCGGAGGGCTCATAAGTCATGGACGATGCAACGAAGCAGGTAAGTATCTCGAGGAAATGATCGAGAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGAAGACCTGACATTCTTGAAGAATTAGCTCAAAAACTGAAATTCTCTGGTAAATTTGAAGCATCCAATGTGATTGCACGATGGGCTGAGATGATGAGGAAGAGAGTCAAGAGAAGAACACCTACGAACATTGTCAATGCTGATCATAGCAACCGACTGATACACGATGAACACTATTTTTCGGTTTTGTGGATGAGATCAACGGCCATAAAAAACCGAAGAGATTACTCGGTTTTGTATCCCGGGGATTTTCGTCACTAA

Protein sequence

MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRSHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSHSDSEIEYEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCNEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWAEMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSVLWMRSTAIKNRRDYSVLYPGDFRH
Homology
[Close]
BLAST of Carg23255 vs. NCBI nr
Match: XP_022937612.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 760.8 bits (1963), Expect = 3.9e-216
Identity = 626/632 (99.05%), Postives = 627/632 (99.21%), Query Frame = 0 

Query: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60
           MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS
Sbjct: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60

Query: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120
           HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH
Sbjct: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120

Query: 121 SDSEIEYEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDLVL 180
           SDSEIE EISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDEC +ILSHDLVL
Sbjct: 121 SDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVL 180

Query: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240
           NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE
Sbjct: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240

Query: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300
           LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA
Sbjct: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300

Query: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX 360
           VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX
Sbjct: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600
           XXXXXXXXXX   MKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA
Sbjct: 541 XXXXXXXXXXEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600

Query: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFS 633
           EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFS
Sbjct: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFS 632

[Close]
BLAST of Carg23255 vs. NCBI nr
Match: XP_023537572.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 745.7 bits (1924), Expect = 1.3e-211
Identity = 619/633 (97.79%), Postives = 621/633 (98.10%), Query Frame = 0 

Query: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60
           MSLSLTFRRFSNFSAFP T SNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS
Sbjct: 1   MSLSLTFRRFSNFSAFPATNSNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60

Query: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120
           HGSFHSSLCQIPFILPHASSFFVPQETMLIA SSRTINFRNPPFPCFDLLVRGFCDRNS+
Sbjct: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIALSSRTINFRNPPFPCFDLLVRGFCDRNSY 120

Query: 121 SDSEIEYEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDLVL 180
           SDSEIE EISEDDDRES+SRAN IEVDRVCKVLDELFALDRNMEAVLDEC IILSHDLVL
Sbjct: 121 SDSEIECEISEDDDRESESRANSIEVDRVCKVLDELFALDRNMEAVLDECGIILSHDLVL 180

Query: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240
           NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE
Sbjct: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240

Query: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300
           LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA
Sbjct: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300

Query: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX 360
           VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEG  XXXXXXXXXXXXXXX
Sbjct: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGCKXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600
           XXXXXXXXXX   MKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA
Sbjct: 541 XXXXXXXXXXEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600

Query: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSV 634
           EMMRKRVKRRTP NIVNADHSNRLIHDEHYFSV
Sbjct: 601 EMMRKRVKRRTPRNIVNADHSNRLIHDEHYFSV 633

[Close]
BLAST of Carg23255 vs. NCBI nr
Match: XP_022965638.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 702.6 bits (1812), Expect = 1.3e-198
Identity = 605/633 (95.58%), Postives = 607/633 (95.89%), Query Frame = 0 

Query: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60
           MSLSLTFRRFSNFSAFP TISNAACQI+RSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS
Sbjct: 1   MSLSLTFRRFSNFSAFPATISNAACQIQRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60

Query: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120
           HGSFHSSLCQIPFILPHASSFFVPQETMLIA SSRTINFRNPPFPCFDLLVRGFCDRNS 
Sbjct: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIAMSSRTINFRNPPFPCFDLLVRGFCDRNSD 120

Query: 121 SDSEIEYEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDLVL 180
                               AN IEVDRVCKVLDELFALDRNMEAVLDEC IILSHDLVL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXANSIEVDRVCKVLDELFALDRNMEAVLDECGIILSHDLVL 180

Query: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240
           NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMA KE
Sbjct: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAAKE 240

Query: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300
           LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA
Sbjct: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300

Query: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX 360
           VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX
Sbjct: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600
           XXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA
Sbjct: 541 XXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600

Query: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSV 634
           EMMRKRVKRRTPTNIVNADHS+RLIHDEHYFSV
Sbjct: 601 EMMRKRVKRRTPTNIVNADHSSRLIHDEHYFSV 633

[Close]
BLAST of Carg23255 vs. NCBI nr
Match: XP_008453445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 582.8 bits (1501), Expect = 1.5e-162
Identity = 523/623 (83.95%), Postives = 549/623 (88.12%), Query Frame = 0 

Query: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60
           MSLSL T RR SNFS F   I NA  +I+R++GR+GR FR KMR+P CSS+PL  MFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120
           SH SFHSS CQIPFILP+ASSF VPQE +L    SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SHSDSEIEYEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDL 180
           S SDSEIE E SE DDRE DSR +  EVDRVCKV+DELFALDRNMEAVLDEC + L+HDL
Sbjct: 121 SDSDSEIECEKSEXDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHDL 180

Query: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILG+TRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXX 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE XXXXXXXXXXXXXXX
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGLISLGR 540

Query: 541 XXXXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600
                          MKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRTPTNIVNADHS 622
           WAEMMRKRVKRR PTN +N DHS
Sbjct: 601 WAEMMRKRVKRRNPTNFINGDHS 623

[Close]
BLAST of Carg23255 vs. NCBI nr
Match: XP_004144748.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis sativus] >KGN61002.1 hypothetical protein Csa_2G034550 [Cucumis sativus])

HSP 1 Score: 563.9 bits (1452), Expect = 7.1e-157
Identity = 523/624 (83.81%), Postives = 547/624 (87.66%), Query Frame = 0 

Query: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60
           MS+SL T  R SNFS F   I NA   I+R++GR+GR FR KMRVP CSSLPL  MFDS 
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120
           SH SFH S CQIPFILP+ASSF VPQE +LI ++ RTI+FRNPPFP  DLL RGFCD  N
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 SHSDSEIEYEISEDDD-RESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHD 180
             SDSEIE E SE++D RE DS     EV+RVCKV+DELFALDRNMEAVLDEC + LSHD
Sbjct: 121 PDSDSEIECEKSEEEDNRECDS----TEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180

Query: 181 LVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240
           LVL VL RFKQARKPAFRFFCWAA KPGF+HDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFK+FAAAKER+KA+G+ ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 AQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXX 360
           A  +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE XXXXXXXXXXXXXX
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISLG 540

Query: 541 XXXXXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIA 600
                           MKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEASNVIA
Sbjct: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600

Query: 601 RWAEMMRKRVKRRTPTNIVNADHS 622
           RWAEMMRKRVKRR PTN +N DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFINDDHS 620

[Close]
BLAST of Carg23255 vs. TAIR10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 315.1 bits (806), Expect = 1.0e-85
Identity = 160/226 (70.80%), Postives = 186/226 (82.30%), Query Frame = 0 

Query: 112 RGFCDRNSH----SDSEIEYEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLM 331
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315

[Close]
BLAST of Carg23255 vs. TAIR10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 315.1 bits (806), Expect = 1.0e-85
Identity = 160/226 (70.80%), Postives = 186/226 (82.30%), Query Frame = 0 

Query: 112 RGFCDRNSH----SDSEIEYEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 89  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 148

Query: 172 AVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 149 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 208

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 209 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 268

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLM 331
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314

[Close]
BLAST of Carg23255 vs. TAIR10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 312.0 bits (798), Expect = 8.8e-85
Identity = 159/226 (70.35%), Postives = 185/226 (81.86%), Query Frame = 0 

Query: 112 RGFCDRNSH----SDSEIEYEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+H S+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLM 331
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315

[Close]
BLAST of Carg23255 vs. TAIR10
Match: AT1G26500.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-30
Identity = 86/259 (33.20%), Postives = 134/259 (51.74%), Query Frame = 0 

Query: 90  IATSSRTINFRNPPFPCFDLLVRGFCDRNSHSDSEIEYEISEDDDRESDSRANPIEVD-- 149
           + TS R IN  N    CF L  R F        +E+           + +   PI  D  
Sbjct: 5   VVTSRRMINIGNSIRRCFILNHRFF-------STEL-----------TPTTITPINQDHL 64

Query: 150 -RVCKVL-DELFALDRNMEAVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWA-AHKP 209
            RVC +L  +  + D  + + L      L+H+  L V   F  + +P  RFF ++  H P
Sbjct: 65  LRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHP 124

Query: 210 GFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAI 269
            F+H S T N M+ I+G +R  +    L +E+ ++ L+  +TF I  K+ A+A+E +K +
Sbjct: 125 DFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCV 184

Query: 270 GIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWC 329
             F LM  + Y   VET+N  +++L + KL +EA+ VF KL     P+  TY  ++ G+C
Sbjct: 185 NYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFC 244

Query: 330 RVRNLMEAGKIWNLMIDEG 344
            V +L+EA K+WNLM+DEG
Sbjct: 245 DVGDLIEAAKLWNLMMDEG 245

[Close]
BLAST of Carg23255 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-25
Identity = 67/217 (30.88%), Postives = 114/217 (52.53%), Query Frame = 0 

Query: 128 EISEDDDRESDSRANPIE-VDRVCKVLDELFALDRNMEAVLDECSIILSHDLVLNVLERF 187
           + S     E +    P+E +D+VC  L++      ++   L +C ++++  LVL VL RF
Sbjct: 83  KFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRF 142

Query: 188 KQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEM---AEKELLT 247
                 A+ FF WA  + G+ H   TYN M+ +LGK R F+ M  L+ EM    E +L+T
Sbjct: 143 SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVT 202

Query: 248 METFTICFKSFAAAKERRKAIGIF-ELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVF 307
           ++T +   +  A + +  KA+  F E+ K Y  K     +N L+D+L +    + A  VF
Sbjct: 203 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262

Query: 308 EKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLM 340
            KL     P+ +T+ +L++G+C+ R   +A  + +LM
Sbjct: 263 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLM 299

[Close]
BLAST of Carg23255 vs. Swiss-Prot
Match: sp|Q9LZP3|PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-84
Identity = 160/226 (70.80%), Postives = 186/226 (82.30%), Query Frame = 0 

Query: 112 RGFCDRNSH----SDSEIEYEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLM 331
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315

[Close]
BLAST of Carg23255 vs. Swiss-Prot
Match: sp|Q9LEQ7|PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-84
Identity = 160/226 (70.80%), Postives = 186/226 (82.30%), Query Frame = 0 

Query: 112 RGFCDRNSH----SDSEIEYEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 89  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 148

Query: 172 AVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 149 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 208

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 209 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 268

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLM 331
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314

[Close]
BLAST of Carg23255 vs. Swiss-Prot
Match: sp|Q3EAF8|PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-83
Identity = 159/226 (70.35%), Postives = 185/226 (81.86%), Query Frame = 0 

Query: 112 RGFCDRNSH----SDSEIEYEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+H S+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLM 331
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315

[Close]
BLAST of Carg23255 vs. Swiss-Prot
Match: sp|Q9FZD4|PPR59_ARATH (Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana OX=3702 GN=At1g26500 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.8e-29
Identity = 86/259 (33.20%), Postives = 134/259 (51.74%), Query Frame = 0 

Query: 90  IATSSRTINFRNPPFPCFDLLVRGFCDRNSHSDSEIEYEISEDDDRESDSRANPIEVD-- 149
           + TS R IN  N    CF L  R F        +E+           + +   PI  D  
Sbjct: 5   VVTSRRMINIGNSIRRCFILNHRFF-------STEL-----------TPTTITPINQDHL 64

Query: 150 -RVCKVL-DELFALDRNMEAVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWA-AHKP 209
            RVC +L  +  + D  + + L      L+H+  L V   F  + +P  RFF ++  H P
Sbjct: 65  LRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHP 124

Query: 210 GFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAI 269
            F+H S T N M+ I+G +R  +    L +E+ ++ L+  +TF I  K+ A+A+E +K +
Sbjct: 125 DFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCV 184

Query: 270 GIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWC 329
             F LM  + Y   VET+N  +++L + KL +EA+ VF KL     P+  TY  ++ G+C
Sbjct: 185 NYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFC 244

Query: 330 RVRNLMEAGKIWNLMIDEG 344
            V +L+EA K+WNLM+DEG
Sbjct: 245 DVGDLIEAAKLWNLMMDEG 245

[Close]
BLAST of Carg23255 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-24
Identity = 67/217 (30.88%), Postives = 114/217 (52.53%), Query Frame = 0 

Query: 128 EISEDDDRESDSRANPIE-VDRVCKVLDELFALDRNMEAVLDECSIILSHDLVLNVLERF 187
           + S     E +    P+E +D+VC  L++      ++   L +C ++++  LVL VL RF
Sbjct: 83  KFSRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRF 142

Query: 188 KQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEM---AEKELLT 247
                 A+ FF WA  + G+ H   TYN M+ +LGK R F+ M  L+ EM    E +L+T
Sbjct: 143 SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVT 202

Query: 248 METFTICFKSFAAAKERRKAIGIF-ELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVF 307
           ++T +   +  A + +  KA+  F E+ K Y  K     +N L+D+L +    + A  VF
Sbjct: 203 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262

Query: 308 EKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLM 340
            KL     P+ +T+ +L++G+C+ R   +A  + +LM
Sbjct: 263 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLM 299

[Close]
BLAST of Carg23255 vs. TrEMBL
Match: tr|A0A1S3BWC0|A0A1S3BWC0_CUCME (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494147 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 9.7e-163
Identity = 523/623 (83.95%), Postives = 549/623 (88.12%), Query Frame = 0 

Query: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60
           MSLSL T RR SNFS F   I NA  +I+R++GR+GR FR KMR+P CSS+PL  MFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120
           SH SFHSS CQIPFILP+ASSF VPQE +L    SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SHSDSEIEYEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDL 180
           S SDSEIE E SE DDRE DSR +  EVDRVCKV+DELFALDRNMEAVLDEC + L+HDL
Sbjct: 121 SDSDSEIECEKSEXDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHDL 180

Query: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILG+TRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXXX 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE XXXXXXXXXXXXXXX
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGLISLGR 540

Query: 541 XXXXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600
                          MKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRTPTNIVNADHS 622
           WAEMMRKRVKRR PTN +N DHS
Sbjct: 601 WAEMMRKRVKRRNPTNFINGDHS 623

[Close]
BLAST of Carg23255 vs. TrEMBL
Match: tr|A0A0A0LK05|A0A0A0LK05_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.7e-157
Identity = 523/624 (83.81%), Postives = 547/624 (87.66%), Query Frame = 0 

Query: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60
           MS+SL T  R SNFS F   I NA   I+R++GR+GR FR KMRVP CSSLPL  MFDS 
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120
           SH SFH S CQIPFILP+ASSF VPQE +LI ++ RTI+FRNPPFP  DLL RGFCD  N
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 SHSDSEIEYEISEDDD-RESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHD 180
             SDSEIE E SE++D RE DS     EV+RVCKV+DELFALDRNMEAVLDEC + LSHD
Sbjct: 121 PDSDSEIECEKSEEEDNRECDS----TEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180

Query: 181 LVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240
           LVL VL RFKQARKPAFRFFCWAA KPGF+HDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFK+FAAAKER+KA+G+ ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 AQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGXXXXXXXXXXXXXX 360
           A  +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE XXXXXXXXXXXXXX
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLISLG 540

Query: 541 XXXXXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIA 600
                           MKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEASNVIA
Sbjct: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600

Query: 601 RWAEMMRKRVKRRTPTNIVNADHS 622
           RWAEMMRKRVKRR PTN +N DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFINDDHS 620

[Close]
BLAST of Carg23255 vs. TrEMBL
Match: tr|A0A067K8Y3|A0A067K8Y3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14020 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 2.8e-101
Identity = 201/326 (61.66%), Postives = 246/326 (75.46%), Query Frame = 0 

Query: 35  GRSFRG-KMRVPRCSSLPLSRMFDSRSHGSFHSSLCQIPFILPHASSFFVPQETMLIATS 94
           G+  RG ++ +P CSSLP SR+F S SH S + S CQ+PFILPH+S     QE + +AT 
Sbjct: 46  GKRCRGEQVCLPGCSSLPWSRLFYSSSHRSLYHSYCQVPFILPHSSPLDYLQEKLSLATK 105

Query: 95  SR-TINFRNPPFPCF-------DLLVRGF-------CDRNSHSDSEIEYEISEDDDRESD 154
           SR  IN        F       +L  RGF        D ++ SD   + +I E+D+   +
Sbjct: 106 SRFIINIETSLLSSFYVQGKFSELTSRGFSCFTGGGADSDAESDGNNDSDIFENDNGGGN 165

Query: 155 --SRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDLVLNVLERFKQARKPAFRF 214
             S A+P+EV+RVCKV+DELFALDRNMEAVLDEC I LS DLV++VLERF+ ARKPAFRF
Sbjct: 166 VKSSADPVEVNRVCKVIDELFALDRNMEAVLDECGINLSQDLVIDVLERFRHARKPAFRF 225

Query: 215 FCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAA 274
           FCWA  K GF+HDS+TYN MM+IL KTRQFETM+S+LEE+ EK LLTMETF+I  ++FA 
Sbjct: 226 FCWAGQKQGFAHDSRTYNSMMSILAKTRQFETMISMLEEIGEKGLLTMETFSIAMRAFAV 285

Query: 275 AKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTY 334
           AKER+KA+ IFELMKK+KYKVGVETIN LLDSLGR+KLGKEA+ +F KL GRFTPNL+TY
Sbjct: 286 AKERKKAVAIFELMKKHKYKVGVETINSLLDSLGRSKLGKEAEVLFGKLIGRFTPNLKTY 345

Query: 335 TVLLNGWCRVRNLMEAGKIWNLMIDE 343
           TVLLNGWC+V+NLMEAG+IWN MID+
Sbjct: 346 TVLLNGWCKVKNLMEAGRIWNEMIDK 371

[Close]
BLAST of Carg23255 vs. TrEMBL
Match: tr|A0A2C9WNQ9|A0A2C9WNQ9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G227300 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 2.0e-99
Identity = 200/329 (60.79%), Postives = 243/329 (73.86%), Query Frame = 0 

Query: 26  QIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRSHGSFHSSLCQIPFILPHASSFFVPQ 85
           +IRR  G+  R    ++ +P   SLP+ R+F S  H S +SS CQ+PF+LPH+SS    Q
Sbjct: 42  EIRRGGGKRWRG--QQVCLPDGGSLPMCRLFHSSPHSSLYSSHCQVPFLLPHSSSLSHLQ 101

Query: 86  ETMLIATSSRTINF-RNPPFP-------CFDLLVRGF-CDRNSHSDSEIE----YEI--- 145
           E + + T SR+IN+    P P         +L  R F C  ++ +DS+ E    YE    
Sbjct: 102 ENLSLVTKSRSINYSETSPLPSVYTRGKLIELAARSFSCFTSAGADSDAEIDENYESDNC 161

Query: 146 -SEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECSIILSHDLVLNVLERFKQ 205
            S+D+     S A+P+EVDRVCKV+DELFALDRNMEAVLDEC I LSHDLV++VL RF+ 
Sbjct: 162 GSDDEGAGIKSSADPVEVDRVCKVIDELFALDRNMEAVLDECGINLSHDLVIDVLRRFRH 221

Query: 206 ARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFT 265
           ARKPAFRFFCWA  K GFSHDS+TYN MM+IL KTRQFETMVS+LEEM E+ LLTM+TF+
Sbjct: 222 ARKPAFRFFCWAGQKQGFSHDSRTYNSMMSILAKTRQFETMVSMLEEMGERGLLTMDTFS 281

Query: 266 ICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGR 325
           I  + FA AKER+KA+G+FELMKK+K K GVETIN LLDSLGRAKL KEAQ +F KL GR
Sbjct: 282 IAMRGFAVAKERKKAVGMFELMKKHKCKTGVETINSLLDSLGRAKLVKEAQVLFGKLEGR 341

Query: 326 FTPNLQTYTVLLNGWCRVRNLMEAGKIWN 338
           FTPNL+TYTVLLNGWCRV+NLMEAG+IWN
Sbjct: 342 FTPNLRTYTVLLNGWCRVKNLMEAGRIWN 368

[Close]
BLAST of Carg23255 vs. TrEMBL
Match: tr|A0A068TNX3|A0A068TNX3_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022014001 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.6e-99
Identity = 427/578 (73.88%), Postives = 463/578 (80.10%), Query Frame = 0 

Query: 48  SSLPLSRMFDSRSHGSFHSSLCQIPFILPHASSFFVPQETMLI------------ATSSR 107
           S LPLSR+  S    S   + CQ+PFILPH +SFF  QE + +            +T+S 
Sbjct: 66  SPLPLSRLLHSPGDCSLRRTYCQVPFILPHPTSFFPLQENLSLPLGLPRKAGSFNSTASI 125

Query: 108 TINFRNPPFPCFDLLVRGFCDRNSHSDSEIEYEISEDDDRES-DSRANPIEVDRVCKVLD 167
             N  N             C+    S+S++E E+   D  ES  S A+P EVDRVCKV+D
Sbjct: 126 VANLSNNRHQFRRFCSITDCEFEDFSNSDVESELENSDIAESVKSEADPNEVDRVCKVID 185

Query: 168 ELFALDRNMEAVLDECSIILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYN 227
           ELF LDRNMEAVLDE  I LSHDLV++VLERFK ARKPAFRFFCWA+ +  ++HDS+TYN
Sbjct: 186 ELFTLDRNMEAVLDESGINLSHDLVVDVLERFKHARKPAFRFFCWASRRSDYAHDSRTYN 245

Query: 228 MMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYK 287
            MM ILGKTRQFETMVSLLEEM EK LLTMETF I  K+F AAKER+KAIG+FELMKKYK
Sbjct: 246 AMMNILGKTRQFETMVSLLEEMGEKGLLTMETFIISMKAFVAAKERKKAIGMFELMKKYK 305

Query: 288 YKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGK 347
           +KVGVETINCLLD++GRAKLGKEAQ +FEKL  RFTPNL+TYTVLLNGWCRV+NLMEAG 
Sbjct: 306 FKVGVETINCLLDAMGRAKLGKEAQILFEKLEHRFTPNLRTYTVLLNGWCRVKNLMEAGX 365

Query: 348 IWNLMIDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 407
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425

Query: 408 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 467
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 485

Query: 468 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 527
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 486 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 545

Query: 528 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKAPQLDYNKFAADFSRAGRP 587
           XXXXXXXXXXXXXXXXX                      MKAPQLDYNKFAADFSRAG+P
Sbjct: 546 XXXXXXXXXXXXXXXXXGLIRHGRSVEACKFLEEMIAKGMKAPQLDYNKFAADFSRAGKP 605

Query: 588 DILEELAQKLKFSGKFEASNVIARWAEMMRKRVKRRTP 613
           D+LEELAQK+KFSGKF  SN+ ARWAEMM+KRVKRR P
Sbjct: 606 DVLEELAQKMKFSGKFADSNLFARWAEMMKKRVKRRDP 643

The following BLAST results are available for this feature:
BLAST of Carg23255 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937612.13.9e-21699.05pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucur... [more]
XP_023537572.11.3e-21197.79pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucur... [more]
XP_022965638.11.3e-19895.58pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucur... [more]
XP_008453445.11.5e-16283.95PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-... [more]
XP_004144748.17.1e-15783.81PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-... [more]
BLAST of Carg23255 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G62470.11.0e-8570.80Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.11.0e-8570.80Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.18.8e-8570.35Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G26500.12.1e-3033.20Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22670.12.1e-2530.88Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg23255 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LZP3|PP293_ARATH1.9e-8470.80Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
sp|Q9LEQ7|PP382_ARATH1.9e-8470.80Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
sp|Q3EAF8|PP294_ARATH1.6e-8370.35Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
sp|Q9FZD4|PPR59_ARATH3.8e-2933.20Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis th... [more]
sp|Q9LUJ4|PP248_ARATH3.7e-2430.88Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
BLAST of Carg23255 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BWC0|A0A1S3BWC0_CUCME9.7e-16383.95pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc... [more]
tr|A0A0A0LK05|A0A0A0LK05_CUCSA4.7e-15783.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1[more]
tr|A0A067K8Y3|A0A067K8Y3_JATCU2.8e-10161.66Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14020 PE=4 SV=1[more]
tr|A0A2C9WNQ9|A0A2C9WNQ9_MANES2.0e-9960.79Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G227300 PE=4 SV=... [more]
tr|A0A068TNX3|A0A068TNX3_COFCA2.6e-9973.88Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022014001 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23255-RACarg23255-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 486..533
e-value: 3.9E-12
score: 46.0
coord: 416..461
e-value: 2.4E-11
score: 43.5
coord: 346..395
e-value: 1.8E-13
score: 50.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 315..344
e-value: 7.9E-4
score: 19.4
coord: 212..239
e-value: 0.0027
score: 17.8
coord: 282..305
e-value: 0.84
score: 9.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 455..487
e-value: 6.2E-7
score: 27.2
coord: 315..348
e-value: 3.2E-7
score: 28.1
coord: 385..418
e-value: 3.3E-8
score: 31.2
coord: 349..383
e-value: 8.9E-5
score: 20.4
coord: 212..239
e-value: 7.3E-5
score: 20.7
coord: 420..452
e-value: 1.9E-6
score: 25.7
coord: 489..522
e-value: 1.8E-9
score: 35.2
coord: 525..555
e-value: 0.0013
score: 16.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 11.531
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 452..486
score: 11.619
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 278..308
score: 6.434
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..243
score: 9.514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 12.803
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 9.712
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 417..451
score: 10.501
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 11.345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 10.874
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 444..630
e-value: 2.0E-33
score: 118.1
coord: 308..443
e-value: 7.9E-37
score: 129.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 145..307
e-value: 3.3E-16
score: 61.7
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 129..603
NoneNo IPR availablePANTHERPTHR24015:SF429SUBFAMILY NOT NAMEDcoord: 129..603
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 296..514