Lsi11G005340 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAAAGTAGCTGAGTTTCTTTTCAAATCGAAACACAATGGCCAAATGGGACCGAAGAAGTGGATCGATCTTCTCCGTCGATCCAGTCGCCGTCAACCTAATCCGACGGCCAATACCCCCAACCGAACGGTGGCGCTAATTCTTCATAAGACACCACCGGCATCACGCGCTCTCAATTCTCTTACTCGGCAATTCCCCGTCTTTTTCCTGTGTTTGTTCCCATTTTAAAGCCTTACCTACCCAAAACGAGAGAATCCCATTTGAAATTGCTTGAAATTTCATTCATAGGAAGAGAGAATCATGAATTTTGATCTCGAATCGCTCTCGGAGGCCACTTCCGGTGCGATCGGTTCGCTTGTCAGCACCACCATCTTGTACCCGCTTGACACCTGCAAGTCCAAGTACCAAGCCGAGGTTCGAGCCCATGGCCAACAGAAATACAGGTTGCCCACAGTTTCGTTTTTGTTTCTATTGATCTGGGTTTGTGTGTTTCCCCTGTTATCTCGATGGGTTTGGGTAACTTTCTTGTTTTGATTTCAAATCGTGATCTGGGGTATCATTGCTGCAATCATTACCCTGTTTTTGAAGGAATTTCTATGGTCAATTGAGTTAGTTTCTGATGAATGTACCTAACATGTACTTGGAGCTCTTTTTTTCCCCAAGTATTCGGTCTTATGATCTTTGAAAATCGATCTCGTCATTGATCTCATTACTGCTCAGACGTTGTAGTTTCAGCGAATTTTAGGTGGTAAGGGTTGTTCTTTGTTTAATCGAATGATCTATAGAATTCGAGCGCTTCTGAAGTGGTTGGTTGGTGAGCTGTGGGAATTTTGTGATAGTTTGAAAGCATTTGCGGCTGTTTCAGGCTCCTTGGAATCTGGAAAATTCTCTTGTTATGTATTTTGTAGCTAATTTTGTGAGTTGGATGAGATGATTTGATTGAAGTATGAATGCTAACTGGGCTTGTTTGGGGTTCATGGCGTGTAGATCATTAGTGAAACGATGCTTGTGGAAGAACAAAGCAATACAGAAAACTTGTTAGTTGGTATCTCTGATTAACACTTTTGTCACAACACAGCACAATCACTGCAATGACCTCCTGGTTCAAAATGGCTCTGCTTTTCTACTAGAAAACTAATTCGACGCCACAAAATGTTGGATGTAGTTGTCGTTTTGCATCTCTATTGATTCAATTGGTTTTGGCTTGTGTAGGTATCTTTCAGATGTCTTGTGGGAAGCAATAAAAAACAATCAAGTTCTTTCGCTGTACCAGGGGCTGGGAACAAAGAATCTACAATCTTTTGTTTCTCAGTTTTTGTACTTCTATGGATATAGCTACTTCAAAAGACTATATCTGGAAAAAACTGGGGCGAAATCAATTGGAACAAAAGCAAATCTGTTACTTGCTGCTGCTGCTGGAGCTTGCAATGCCATTTTAACTCAGGTTGAAAATATCTCTGTTGTCAACCTTGTGGTGAATAAAATATAATCGGCCTACATTTGTCAGTGATGTTTGGTATGCTTAGTCTTTGTGAAGCAAGATAAGGTTTTGGCTTCATATTCGTTCATATGCTGTAATTTCTCAATTCAGTGTGTGAAACTTTTTTTAGAATGAATGGATGAAGAAATAATTCAAGAAAGCAAAGCATACTTTACTTTTTGTCCATCCACTTCTAGTTTCAGTCTGTCCTGCTTGTTAAAAGATAGGTTTGCTTTTATTACATTATCAATTGCCACATTGAGCTGCATAGTTTGATGAACGTCATTGCTATATGAAGATTCAAGTCTCTTTATGAAGTCATGTATGAACAAGAACAAATCTTGATGAAAAATTGAAGTTTAATGGTTTAACCGAAGAAACTCTCTTGGTTTTTCATCGTGTAGCCCTTGGATACAGCATCCTCAAGAATGCAGACAAGCGCCTTCGGAAAATCGAAAGGGCTTTTCCAGACCCTGACAGAGGGCAGTTGGAGTGATGCATTTGATGGTCTTGGAATTTCTTTGCTGCTGACTTCAAACCCTGCCATTCAGGTATTTGTCCTATCCATGCTAATTTTCACTTATCCTTTTGTTCATACCCGGTGCGACCGAAATCATTTAAGTTGCGATGTTCTCTCCAGCCAATTTATTTTCTTCTAAACATTCTTATTTGTGACTGCACTTCAGATTTGACACATGAATTATGATTTATTGCAGTATACTGTATTTGATCAGCTGAAGCAGCACATCCTCAAAGGAAAACAGAATAAAACAGAACAAGGTTCATCTCCGGTAGCGCTTTCTGCTTTTACAGCTTTTGTAATAGGTGCAATTTCAAAAAGCATTGCCACCGTTTTGACATATCCTGCAATCAGGTGCATAACTTTTTCTTTCTTCACCAAAATTCTCATGTCCTTATCCTTCAAACACTGGCATGTTGAAACAATGAAGATTTTTCTCCGTGTACAGGTGTAAGGTGATGATCCAAGCTGCACACGACGACGACGAAACGAAAGAAAATCGTCCAAAGGTGCACCGAACAGTTCCAGGTGTTGTCCATTCTATATGGAGAAAAGAAGGGATACTGGGATTTTTCAAGGGATTGCAAGCACAGATCTTGAAGACTGTACTTAGTTCAGCTCTTCTTTTGATGATAAAAGAGAAGATCACTTCAAGTACTTGGGTTTTAATACTTGCAACCAGAAGGTATCTATTGCTTACTAGACCTAAATTAAAAAGTAGCTGAAGGTGTTCAATAAAAGCCAGAAACCTGTGAAGAAGAAGAAGCAATAACATGGGAATAAGCACCATTCCCATGGAAGTAATGCAAGCTTGTTGATTTTTACCAAAATAATAATGGATAAATTGCAATTTTAGTTCTTATGCTTTGGAGAATGTTAGAATTTAGTCTTTATGGTTTAAAATTAGAATTTAGTCCTGATTCAACATTAAGATTTAGTCCCTATAGTTTGATAAAAGCTTCGTAAATAGTTTTTAGAGTAGAGACTATTAATGAATATTTTATCAAACTATAGAGACTATTTACGAGGGTGTATCAAACCATAGGGATTAAGTTCTAACTTTCTCCAAATCAGAGGGACCAAATTTACAATTTAATCAATAATAATATATCCTCTATGGAGTTCAGTATTTATTGTTGAAATGCAGGATTTTTTTTGTTAAGAGGGGATTTTGTTTAGTTAGAACATGATTGTAACCAATGCCATAAATCTTGTATTCAACTAGTAGTCCATGTAACTTAGTTTGTAATCATAGATTTCTTTCCACATAAATTTTGGAGAAAGACCTTTTTGGTCCTTGAACTTTGACTATGATTTTCATTTCGTCCCTAGATTTTTAAATATTACTATTTTACCCCTGAGTATTGAGTATTAAGTATAGTTTTTATTTGGTCATAGATTTCAAGATGTTACACATTTATAAAAGGCTCACTTTTAGTCCTCGTGTTAA CAAAAAAAGTAGCTGAGTTTCTTTTCAAATCGAAACACAATGGCCAAATGGGACCGAAGAAGTGGATCGATCTTCTCCGTCGATCCAGTCGCCGTCAACCTAATCCGACGGCCAATACCCCCAACCGAACGGTGGCGCTAATTCTTCATAAGACACCACCGGCATCACGCGCTCTCAATTCTCTTACTCGGCAATTCCCCGTCTTTTTCCTGTGTTTGTTCCCATTTTAAAGCCTTACCTACCCAAAACGAGAGAATCCCATTTGAAATTGCTTGAAATTTCATTCATAGGAAGAGAGAATCATGAATTTTGATCTCGAATCGCTCTCGGAGGCCACTTCCGGTGCGATCGGTTCGCTTGTCAGCACCACCATCTTGTACCCGCTTGACACCTGCAAGTCCAAGTACCAAGCCGAGGTTCGAGCCCATGGCCAACAGAAATACAGAATTCGAGCGCTTCTGAAGTGGTTGGTTGGTGAGCTGTGGGAATTTTGTGATAGTTTGAAAGCATTTGCGGCTGTTTCAGGCTCCTTGGAATCTGGAAAATTCTCTTGTTATATCATTAGTGAAACGATGCTTGTGGAAGAACAAAGCAATACAGAAAACTTGTATCTTTCAGATGTCTTGTGGGAAGCAATAAAAAACAATCAAGTTCTTTCGCTGTACCAGGGGCTGGGAACAAAGAATCTACAATCTTTTGTTTCTCAGTTTTTGTACTTCTATGGATATAGCTACTTCAAAAGACTATATCTGGAAAAAACTGGGGCGAAATCAATTGGAACAAAAGCAAATCTGTTACTTGCTGCTGCTGCTGGAGCTTGCAATGCCATTTTAACTCAGCCCTTGGATACAGCATCCTCAAGAATGCAGACAAGCGCCTTCGGAAAATCGAAAGGGCTTTTCCAGACCCTGACAGAGGGCAGTTGGAGTGATGCATTTGATGGTCTTGGAATTTCTTTGCTGCTGACTTCAAACCCTGCCATTCAGTATACTGTATTTGATCAGCTGAAGCAGCACATCCTCAAAGGAAAACAGAATAAAACAGAACAAGGTTCATCTCCGGTAGCGCTTTCTGCTTTTACAGCTTTTGTAATAGGTGCAATTTCAAAAAGCATTGCCACCGTTTTGACATATCCTGCAATCAGGTGTAAGGTGATGATCCAAGCTGCACACGACGACGACGAAACGAAAGAAAATCGTCCAAAGGTGCACCGAACAGTTCCAGGTGTTGTCCATTCTATATGGAGAAAAGAAGGGATACTGGGATTTTTCAAGGGATTGCAAGCACAGATCTTGAAGACTGTACTTAGTTCAGCTCTTCTTTTGATGATAAAAGAGAAGATCACTTCAAGTACTTGGGTTTTAATACTTGCAACCAGAAGGTATCTATTGCTTACTAGACCTAAATTAAAAAGTAGCTGAAGGTGTTCAATAAAAGCCAGAAACCTGTGAAGAAGAAGAAGCAATAACATGGGAATAAGCACCATTCCCATGGAAGTAATGCAAGCTTGTTGATTTTTACCAAAATAATAATGGATAAATTGCAATTTTAGTTCTTATGCTTTGGAGAATGTTAGAATTTAGTCTTTATGGTTTAAAATTAGAATTTAGTCCTGATTCAACATTAAGATTTAGTCCCTATAGTTTGATAAAAGCTTCGTAAATAGTTTTTAGAGTAGAGACTATTAATGAATATTTTATCAAACTATAGAGACTATTTACGAGGGTGTATCAAACCATAGGGATTAAGTTCTAACTTTCTCCAAATCAGAGGGACCAAATTTACAATTTAATCAATAATAATATATCCTCTATGGAGTTCAGTATTTATTGTTGAAATGCAGGATTTTTTTTGTTAAGAGGGGATTTTGTTTAGTTAGAACATGATTGTAACCAATGCCATAAATCTTGTATTCAACTAGTAGTCCATGTAACTTAGTTTGTAATCATAGATTTCTTTCCACATAAATTTTGGAGAAAGACCTTTTTGGTCCTTGAACTTTGACTATGATTTTCATTTCGTCCCTAGATTTTTAAATATTACTATTTTACCCCTGAGTATTGAGTATTAAGTATAGTTTTTATTTGGTCATAGATTTCAAGATGTTACACATTTATAAAAGGCTCACTTTTAGTCCTCGTGTTAA ATGAATTTTGATCTCGAATCGCTCTCGGAGGCCACTTCCGGTGCGATCGGTTCGCTTGTCAGCACCACCATCTTGTACCCGCTTGACACCTGCAAGTCCAAGTACCAAGCCGAGGTTCGAGCCCATGGCCAACAGAAATACAGAATTCGAGCGCTTCTGAAGTGGTTGGTTGGTGAGCTGTGGGAATTTTGTGATAGTTTGAAAGCATTTGCGGCTGTTTCAGGCTCCTTGGAATCTGGAAAATTCTCTTGTTATATCATTAGTGAAACGATGCTTGTGGAAGAACAAAGCAATACAGAAAACTTGTATCTTTCAGATGTCTTGTGGGAAGCAATAAAAAACAATCAAGTTCTTTCGCTGTACCAGGGGCTGGGAACAAAGAATCTACAATCTTTTGTTTCTCAGTTTTTGTACTTCTATGGATATAGCTACTTCAAAAGACTATATCTGGAAAAAACTGGGGCGAAATCAATTGGAACAAAAGCAAATCTGTTACTTGCTGCTGCTGCTGGAGCTTGCAATGCCATTTTAACTCAGCCCTTGGATACAGCATCCTCAAGAATGCAGACAAGCGCCTTCGGAAAATCGAAAGGGCTTTTCCAGACCCTGACAGAGGGCAGTTGGAGTGATGCATTTGATGGTCTTGGAATTTCTTTGCTGCTGACTTCAAACCCTGCCATTCAGTATACTGTATTTGATCAGCTGAAGCAGCACATCCTCAAAGGAAAACAGAATAAAACAGAACAAGGTTCATCTCCGGTAGCGCTTTCTGCTTTTACAGCTTTTGTAATAGGTGCAATTTCAAAAAGCATTGCCACCGTTTTGACATATCCTGCAATCAGGTGTAAGGTGATGATCCAAGCTGCACACGACGACGACGAAACGAAAGAAAATCGTCCAAAGGTGCACCGAACAGTTCCAGGTGTTGTCCATTCTATATGGAGAAAAGAAGGGATACTGGGATTTTTCAAGGGATTGCAAGCACAGATCTTGAAGACTGTACTTAGTTCAGCTCTTCTTTTGATGATAAAAGAGAAGATCACTTCAAGTACTTGGGTTTTAATACTTGCAACCAGAAGGTATCTATTGCTTACTAGACCTAAATTAAAAAGTAGCTGA MNFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRAHGQQKYRIRALLKWLVGELWEFCDSLKAFAAVSGSLESGKFSCYIISETMLVEEQSNTENLYLSDVLWEAIKNNQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLEKTGAKSIGTKANLLLAAAAGACNAILTQPLDTASSRMQTSAFGKSKGLFQTLTEGSWSDAFDGLGISLLLTSNPAIQYTVFDQLKQHILKGKQNKTEQGSSPVALSAFTAFVIGAISKSIATVLTYPAIRCKVMIQAAHDDDETKENRPKVHRTVPGVVHSIWRKEGILGFFKGLQAQILKTVLSSALLLMIKEKITSSTWVLILATRRYLLLTRPKLKSS
BLAST of Lsi11G005340 vs. Swiss-Prot
Match: PNC1_ARATH (Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana GN=PNC1 PE=1 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 7.6e-112 Identity = 209/270 (77.41%), Postives = 240/270 (88.89%), Query Frame = 1
BLAST of Lsi11G005340 vs. Swiss-Prot
Match: PNC1_SOYBN (Peroxisomal adenine nucleotide carrier 1 OS=Glycine max GN=PNC1 PE=2 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 2.3e-108 Identity = 206/268 (76.87%), Postives = 236/268 (88.06%), Query Frame = 1
BLAST of Lsi11G005340 vs. Swiss-Prot
Match: PNC2_ARATH (Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana GN=PNC2 PE=1 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 1.3e-106 Identity = 201/271 (74.17%), Postives = 240/271 (88.56%), Query Frame = 1
BLAST of Lsi11G005340 vs. Swiss-Prot
Match: PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.6e-24 Identity = 69/258 (26.74%), Postives = 140/258 (54.26%), Query Frame = 1
BLAST of Lsi11G005340 vs. Swiss-Prot
Match: PM34_HUMAN (Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20 Identity = 80/276 (28.99%), Postives = 146/276 (52.90%), Query Frame = 1
BLAST of Lsi11G005340 vs. TrEMBL
Match: A0A0A0LGC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021690 PE=3 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 5.3e-136 Identity = 259/270 (95.93%), Postives = 266/270 (98.52%), Query Frame = 1
BLAST of Lsi11G005340 vs. TrEMBL
Match: A6YTC9_CUCME (Mitochondrial FAD carrier OS=Cucumis melo subsp. melo PE=3 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 4.5e-135 Identity = 259/270 (95.93%), Postives = 265/270 (98.15%), Query Frame = 1
BLAST of Lsi11G005340 vs. TrEMBL
Match: A0A0S3T292_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G066300 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-125 Identity = 248/364 (68.13%), Postives = 289/364 (79.40%), Query Frame = 1
BLAST of Lsi11G005340 vs. TrEMBL
Match: A0A067KV97_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02134 PE=3 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.4e-115 Identity = 232/379 (61.21%), Postives = 292/379 (77.04%), Query Frame = 1
BLAST of Lsi11G005340 vs. TrEMBL
Match: B9RF53_RICCO (Peroxisomal membrane protein pmp34, putative OS=Ricinus communis GN=RCOM_1431420 PE=3 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 1.1e-114 Identity = 218/270 (80.74%), Postives = 246/270 (91.11%), Query Frame = 1
BLAST of Lsi11G005340 vs. TAIR10
Match: AT3G05290.1 (AT3G05290.1 peroxisomal adenine nucleotide carrier 1) HSP 1 Score: 405.2 bits (1040), Expect = 4.3e-113 Identity = 209/270 (77.41%), Postives = 240/270 (88.89%), Query Frame = 1
BLAST of Lsi11G005340 vs. TAIR10
Match: AT5G27520.1 (AT5G27520.1 peroxisomal adenine nucleotide carrier 2) HSP 1 Score: 387.9 bits (995), Expect = 7.1e-108 Identity = 201/271 (74.17%), Postives = 240/271 (88.56%), Query Frame = 1
BLAST of Lsi11G005340 vs. TAIR10
Match: AT5G66380.1 (AT5G66380.1 folate transporter 1) HSP 1 Score: 75.5 bits (184), Expect = 7.8e-14 Identity = 63/236 (26.69%), Postives = 111/236 (47.03%), Query Frame = 1
BLAST of Lsi11G005340 vs. TAIR10
Match: AT2G39970.1 (AT2G39970.1 Mitochondrial substrate carrier family protein) HSP 1 Score: 73.2 bits (178), Expect = 3.9e-13 Identity = 52/166 (31.33%), Postives = 95/166 (57.23%), Query Frame = 1
BLAST of Lsi11G005340 vs. TAIR10
Match: AT1G25380.1 (AT1G25380.1 NAD+ transporter 2) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12 Identity = 64/238 (26.89%), Postives = 107/238 (44.96%), Query Frame = 1
BLAST of Lsi11G005340 vs. NCBI nr
Match: gi|449442831|ref|XP_004139184.1| (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis sativus]) HSP 1 Score: 492.3 bits (1266), Expect = 7.6e-136 Identity = 259/270 (95.93%), Postives = 266/270 (98.52%), Query Frame = 1
BLAST of Lsi11G005340 vs. NCBI nr
Match: gi|659070371|ref|XP_008454756.1| (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis melo]) HSP 1 Score: 489.2 bits (1258), Expect = 6.4e-135 Identity = 259/270 (95.93%), Postives = 265/270 (98.15%), Query Frame = 1
BLAST of Lsi11G005340 vs. NCBI nr
Match: gi|965613629|dbj|BAT99261.1| (hypothetical protein VIGAN_10066300 [Vigna angularis var. angularis]) HSP 1 Score: 458.0 bits (1177), Expect = 1.6e-125 Identity = 248/364 (68.13%), Postives = 289/364 (79.40%), Query Frame = 1
BLAST of Lsi11G005340 vs. NCBI nr
Match: gi|643733189|gb|KDP40136.1| (hypothetical protein JCGZ_02134 [Jatropha curcas]) HSP 1 Score: 424.5 bits (1090), Expect = 1.9e-115 Identity = 232/379 (61.21%), Postives = 292/379 (77.04%), Query Frame = 1
BLAST of Lsi11G005340 vs. NCBI nr
Match: gi|255542618|ref|XP_002512372.1| (PREDICTED: peroxisomal adenine nucleotide carrier 1 [Ricinus communis]) HSP 1 Score: 421.4 bits (1082), Expect = 1.6e-114 Identity = 218/270 (80.74%), Postives = 246/270 (91.11%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |