Lsi11G004460 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G004460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAuxin-responsive protein
Locationchr11 : 4672476 .. 4674614 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCATTTCATTTATCCTCTTCCCACTTTCCACTCCGATTCTCTTCTCCACTTTCTGTTTGTTTCCCGAGAAAAAAACACACAACCCATCAGAAAATTCAACAAACCCATTTCACAGAAGAAAGAAAAAAACAATGGCCTTCGACAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTGCCGGGAACTTCGCCGGACGATCAATCTTCTCCGATCAATCGAACCAACTCCAACAAAAGAGCTTTACCGTCCGACGACCAGAACCCATCCGAATCCCGCCGGGAAATTAACTCCGATCCCACCAAATGCAACCAAGAAAATCCCCCTCCCACCAAGTAAGCACTATTTTTGAAGTTTTTAAAAATAATTCAATCGAAAAATAATTTTAATAGAATTTGACAAATTTATTAGGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTGTTTTCAATCAAAGAAGAAAGAGGAAGCGGCGGCGGCGGCAGCAACGGCGGGGATGTTCATAAAAGTGAGCATGGATGGAGCTCCTTTTCTAAGGAAAGTTGATCTCAAGATCTATCAAGGATATCCTGATCTTCTTCAAGCTTTGGAGAACATGTTCAAGTTTTCTCTTGGTAATTTTTTTTCTTTTAAATACAATTTCTCTTAGATCTTGAGATCTCTCTCTTAAGGATGAAAATTTATTGATTTTTTTCTCTCTTCAATGTTTTTCTTTCAGGCAAGTTTAGTGAAAGAGAAGGATATAATGGATCGGAATTTGTTCCGACTTATGAAGATAAAGATGGCGATTGGATGCTGGTCGGAGATGTTCCATGGGAGTAAGTTTCAAATCTCTACGTAAAATAAAATGCATGTATTTGTAGTTTTACTCTATTAGATGTAAAAGATAAAATCTACAAAACTATACTGAGAGTTTTCACAAATAGAAAAAATGTCAAATTAATAGACTTCTATCAACATCTATTAGTGATAAACTTCTATCATTTCTATTATTGATAGACTATGATAGACTTCTATCTGCGTCTATCACAACTATCTAAATGTTTTTGCTATTTTGTATAAATAATTTTCCTTATTTTTCTATTTTTAAAAATTCTTCAAAATGTATTTGAATCGAGCAATAATTAGGTGTAATTTTCTAAGCTATATCTTAATTTTATGTGTAGTTTAGGTACCACTTAATTATTTCTCTTTTGAATCTAACGGTCTGAAAAATAGAGAGACGCCACACTTTTTAAAGGATGTATAAGTTATTCTTTTCATTATCGATTAGTTTTGAGATTGAATAACCCACGTTTGTATAATATGGTATCAAAGAGTCCATAAAACTTAAACGGATATATTATTTCACAATTGGAATTTGATCTAAGATTGATGAATTCAAATACATGGAATAACTATTTGATTACTAATTAATTTTGAAATGAAACTCTATGTTTATTTGATAGTATTGGTAAATTTTTGTTTCTCTCTTAAATAGACTAATTAAAGATGGGGTTTATATGAAATTTTTGCAGAATGTTTATGAGCTCATGCAAGAAGCTTAGGATCATGAAAGGATCAGAAGCCAAAGGTTTGGGCTGTGGATCAGTGTGAAAAGAATAAAAAATGAAGAGAAAAAAGGGATTAGAGGGCGCCCAAATTGCTCTCTTTTTTATGATCATCGGATAAGCTGTGAAAGTTCATCACAGCCGCCGTGGATTTGCCGGCGGAGTGCACCGCCGCCGGCCGCCTCTCCGATGATCCGACCAAATTCGATCTCATGTAAATTTTTTAATGAAAAATCAGATCTTGATTTTCTTAGAGAGAGAGAGGGGCTGATGATCAAGAGTCAAGACCCAAAATAAATAAGGGAATTAAGTTTTTTTTTTTTTTTTTTTTGGTGATTATATTCATATTTATTCTTTTGGGGATAATGTAATTGATCAAGATAGGTTGGAAATTATGTTAATTACCCAAAGAGTTTGTACATGTAATTGAATGTGATATAATCATCAATTCCAAGAGAAGGATCTTTTTTATTGATATTCATTCTTATTGAGTTTAAATGTTGAATTAATAAGAATGTTTGACTTTTTATCAAAACGTTTGTCATATGGATTTTTGATATTTTATAT

mRNA sequence

AAGCATTTCATTTATCCTCTTCCCACTTTCCACTCCGATTCTCTTCTCCACTTTCTGTTTGTTTCCCGAGAAAAAAACACACAACCCATCAGAAAATTCAACAAACCCATTTCACAGAAGAAAGAAAAAAACAATGGCCTTCGACAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTGCCGGGAACTTCGCCGGACGATCAATCTTCTCCGATCAATCGAACCAACTCCAACAAAAGAGCTTTACCGTCCGACGACCAGAACCCATCCGAATCCCGCCGGGAAATTAACTCCGATCCCACCAAATGCAACCAAGAAAATCCCCCTCCCACCAAGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTGTTTTCAATCAAAGAAGAAAGAGGAAGCGGCGGCGGCGGCAGCAACGGCGGGGATGTTCATAAAAGTGAGCATGGATGGAGCTCCTTTTCTAAGGAAAGTTGATCTCAAGATCTATCAAGGATATCCTGATCTTCTTCAAGCTTTGGAGAACATGTTCAAGTTTTCTCTTGGCAAGTTTAGTGAAAGAGAAGGATATAATGGATCGGAATTTGTTCCGACTTATGAAGATAAAGATGGCGATTGGATGCTGGTCGGAGATGTTCCATGGGAAATGTTTATGAGCTCATGCAAGAAGCTTAGGATCATGAAAGGATCAGAAGCCAAAGGTTTGGGCTGTGGATCAGTGTGAAAAGAATAAAAAATGAAGAGAAAAAAGGGATTAGAGGGCGCCCAAATTGCTCTCTTTTTTATGATCATCGGATAAGCTGTGAAAGTTCATCACAGCCGCCGTGGATTTGCCGGCGGAGTGCACCGCCGCCGGCCGCCTCTCCGATGATCCGACCAAATTCGATCTCATGTAAATTTTTTAATGAAAAATCAGATCTTGATTTTCTTAGAGAGAGAGAGGGGCTGATGATCAAGAGTCAAGACCCAAAATAAATAAGGGAATTAAGTTTTTTTTTTTTTTTTTTTTGGTGATTATATTCATATTTATTCTTTTGGGGATAATGTAATTGATCAAGATAGGTTGGAAATTATGTTAATTACCCAAAGAGTTTGTACATGTAATTGAATGTGATATAATCATCAATTCCAAGAGAAGGATCTTTTTTATTGATATTCATTCTTATTGAGTTTAAATGTTGAATTAATAAGAATGTTTGACTTTTTATCAAAACGTTTGTCATATGGATTTTTGATATTTTATAT

Coding sequence (CDS)

ATGGCCTTCGACAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTGCCGGGAACTTCGCCGGACGATCAATCTTCTCCGATCAATCGAACCAACTCCAACAAAAGAGCTTTACCGTCCGACGACCAGAACCCATCCGAATCCCGCCGGGAAATTAACTCCGATCCCACCAAATGCAACCAAGAAAATCCCCCTCCCACCAAGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTGTTTTCAATCAAAGAAGAAAGAGGAAGCGGCGGCGGCGGCAGCAACGGCGGGGATGTTCATAAAAGTGAGCATGGATGGAGCTCCTTTTCTAAGGAAAGTTGATCTCAAGATCTATCAAGGATATCCTGATCTTCTTCAAGCTTTGGAGAACATGTTCAAGTTTTCTCTTGGCAAGTTTAGTGAAAGAGAAGGATATAATGGATCGGAATTTGTTCCGACTTATGAAGATAAAGATGGCGATTGGATGCTGGTCGGAGATGTTCCATGGGAAATGTTTATGAGCTCATGCAAGAAGCTTAGGATCATGAAAGGATCAGAAGCCAAAGGTTTGGGCTGTGGATCAGTGTGA

Protein sequence

MAFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMKGSEAKGLGCGSV
Homology
[Close]
BLAST of Lsi11G004460 vs. Swiss-Prot
Match: AX22D_VIGRR (Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.5e-61
Identity = 122/197 (61.93%), Postives = 149/197 (75.63%), Query Frame = 1 

Query: 2   AFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTKC 61
           +++K+LNL+ATELRLGLPG+   ++ +      SNKR+ P      S S     SD TK 
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRAT---ARSNKRSSPEASDEESISN---GSDVTK- 66

Query: 62  NQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVDL 121
                PP KAQVVGWPP+RS+RKN  Q KK+EE+       GM++KVSM GAP+LRK+DL
Sbjct: 67  EDNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGN----GMYVKVSMAGAPYLRKIDL 126

Query: 122 KIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSS 181
           K+Y+ YP+LL+ALENMFK   G++SEREGYNGSE+ PTYEDKDGDWMLVGDVPW MF+SS
Sbjct: 127 KVYKSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSS 186

Query: 182 CKKLRIMKGSEAKGLGC 199
           CK+LRIMKGSEAKGLGC
Sbjct: 187 CKRLRIMKGSEAKGLGC 192

[Close]
BLAST of Lsi11G004460 vs. Swiss-Prot
Match: AX22E_VIGRR (Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-60
Identity = 117/206 (56.80%), Postives = 153/206 (74.27%), Query Frame = 1 

Query: 2   AFDKDLNLEATELRLGLPGTSPDDQSSPINRT---NSNKRALPSDDQNPSESRREINSDP 61
           +++ +LNL ATELRLGLPG+    +  P + +   +SNKR+ P  ++  S  +  INSD 
Sbjct: 3   SYETELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEE--SRCKSNINSDS 62

Query: 62  TKC------NQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDG 121
           +        N+++  P K QVVGWPP+RSFRKN  Q KK E+        GM++KVSM G
Sbjct: 63  SDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGT----GMYLKVSMAG 122

Query: 122 APFLRKVDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGD 181
           AP+LRK+DLK+Y+ YP+LL+AL+N+FK + G++SEREGYNGSE+ PTYEDKDGDWMLVGD
Sbjct: 123 APYLRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGD 182

Query: 182 VPWEMFMSSCKKLRIMKGSEAKGLGC 199
           VPW MF+SSCK+LRI+KGSEAKGLGC
Sbjct: 183 VPWNMFVSSCKRLRIIKGSEAKGLGC 202

[Close]
BLAST of Lsi11G004460 vs. Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 1.8e-59
Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 1 

Query: 3   FDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTKCN 62
           +D+ +NL+ATELRLGLPGT        ++   SNKR LP   +   ES  +         
Sbjct: 7   YDELVNLKATELRLGLPGTE-----ETVSCGKSNKRVLPEATEKEIESTGKT-------- 66

Query: 63  QENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVDLK 122
            E   P KAQ+VGWPPVRS+RKN  Q+KK E         G ++KVSMDGAP+LRK+DL 
Sbjct: 67  -ETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQ-----GNYVKVSMDGAPYLRKIDLT 126

Query: 123 IYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSC 182
           +Y+ YP+L+++LENMFKFS+G++ EREGY GS+FVPTYEDKDGDWMLVGDVPWEMF+SSC
Sbjct: 127 MYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSC 186

Query: 183 KKLRIMKGSEAKGLGCGSV 202
           K+LRIMKGSE KGLGCG +
Sbjct: 187 KRLRIMKGSEVKGLGCGGL 186

[Close]
BLAST of Lsi11G004460 vs. Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.0e-59
Identity = 120/200 (60.00%), Postives = 148/200 (74.00%), Query Frame = 1 

Query: 4   DKDLNLEATELRLGLPGTS----PDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPT 63
           D+ +NL+ TELRLGLPGT       ++ S  N  N+NKR L +D +      +EI S   
Sbjct: 2   DEFVNLKETELRLGLPGTDNVCEAKERVSCCN--NNNKRVLSTDTE------KEIESSSR 61

Query: 64  KCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKV 123
           K   E  PP KAQ+VGWPPVRS+RKN  QSKK E         G+++KVSMDGAP+LRK+
Sbjct: 62  KT--ETSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQ---GIYVKVSMDGAPYLRKI 121

Query: 124 DLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 183
           DL  Y+GY +LL+ALE MFKFS+G++ ER+GY GS+FVPTYEDKDGDWML+GDVPWEMF+
Sbjct: 122 DLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFI 181

Query: 184 SSCKKLRIMKGSEAKGLGCG 200
            +CK+LRIMKGSEAKGLGCG
Sbjct: 182 CTCKRLRIMKGSEAKGLGCG 188

[Close]
BLAST of Lsi11G004460 vs. Swiss-Prot
Match: AX22B_VIGRR (Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-57
Identity = 112/200 (56.00%), Postives = 146/200 (73.00%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQSSPINRT--NSNKRALPSDDQNPSESRREINSDP 60
           + F+ DLNL+ATELRLGLPGT   + ++        +NKR +    Q+ S S  + +   
Sbjct: 5   VVFESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQD-SVSISKASHHQ 64

Query: 61  TKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRK 120
                 + PP KA++VGWPP+RS+RKN  Q  + +         G+F+KVSMDGAP+LRK
Sbjct: 65  QHVETVSAPPPKAKIVGWPPIRSYRKNSVQEGEGD---------GIFVKVSMDGAPYLRK 124

Query: 121 VDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180
           VDLK+Y GYP+LL+ALE MFK ++G++SEREGY GSE+ PTYEDKDGDWMLVGDVPW+MF
Sbjct: 125 VDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMF 184

Query: 181 MSSCKKLRIMKGSEAKGLGC 199
           ++SCK+LRIMKGSEA+GLGC
Sbjct: 185 VTSCKRLRIMKGSEARGLGC 194

[Close]
BLAST of Lsi11G004460 vs. TrEMBL
Match: A0A0A0LID4_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G011420 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 9.0e-98
Identity = 185/202 (91.58%), Postives = 189/202 (93.56%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQS-SPINRTNSNKRALPSDDQNPSESRREINSDPT 60
           MAF+KDLNLEATELRLGLPGTSPDDQS SPINRTNSNKRALPSDDQN SESRREINSD +
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60

Query: 61  KCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKV 120
           KC+QEN PPTKAQVVGWPPVRSFRKN  Q+KKKEE A     AGMFIKVSMDGAPFLRKV
Sbjct: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETA-----AGMFIKVSMDGAPFLRKV 120

Query: 121 DLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 180
           DLKIYQGYPDLLQALENMFKFSLGKF EREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM
Sbjct: 121 DLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 180

Query: 181 SSCKKLRIMKGSEAKGLGCGSV 202
           SSCKKLRIMKGSEAKGLGCGSV
Sbjct: 181 SSCKKLRIMKGSEAKGLGCGSV 197

[Close]
BLAST of Lsi11G004460 vs. TrEMBL
Match: Q9SSY1_CUCSA (Auxin-responsive protein (Fragment) OS=Cucumis sativus GN=CsIAA3 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.3e-84
Identity = 162/179 (90.50%), Postives = 166/179 (92.74%), Query Frame = 1 

Query: 12  TELRLGLPGTSPDDQS-SPINRTNSNKRALPSDDQNPSESRREINSDPTKCNQENPPPTK 71
           TELRLGLPGTSPDDQS SPINRTNSNKRALPSDDQN SESRREINSD +KC+QEN PPTK
Sbjct: 1   TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 60

Query: 72  AQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVDLKIYQGYPDL 131
           AQVVGWPPVRSFRKN  Q+KKKEE A     AGMFIKVSMDGAPFLRKVDLKIYQGYPDL
Sbjct: 61  AQVVGWPPVRSFRKNSLQAKKKEETA-----AGMFIKVSMDGAPFLRKVDLKIYQGYPDL 120

Query: 132 LQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMK 190
           LQALENMFKFSLGKF EREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK+LRIMK
Sbjct: 121 LQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 174

[Close]
BLAST of Lsi11G004460 vs. TrEMBL
Match: A0A061F147_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026344 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 6.1e-70
Identity = 133/198 (67.17%), Postives = 160/198 (80.81%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTK 60
           MAF+KDLNL+AT LRLGLPGTS +  S+      SNKRALP  ++          +D  K
Sbjct: 1   MAFEKDLNLDATALRLGLPGTSEEQTSAS---GKSNKRALPDMNEESVSGDNSNVADARK 60

Query: 61  CNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVD 120
           C+QE  PP+KAQVVGWPP+RS+RKNC Q KK E     A  AG+++KVSMDGAP+LRK+D
Sbjct: 61  CDQETAPPSKAQVVGWPPIRSYRKNCLQPKKTE-----AEAAGIYVKVSMDGAPYLRKID 120

Query: 121 LKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMS 180
           LK+Y+GYP+LL+ALE+MFKF +G++SEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF +
Sbjct: 121 LKVYKGYPELLKALEDMFKFKVGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFTN 180

Query: 181 SCKKLRIMKGSEAKGLGC 199
           SCK+LRIMKGSEA+GLGC
Sbjct: 181 SCKRLRIMKGSEARGLGC 190

[Close]
BLAST of Lsi11G004460 vs. TrEMBL
Match: A0A0B0N1Z3_GOSAR (Auxin-responsive protein OS=Gossypium arboreum GN=F383_30912 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.8e-67
Identity = 132/200 (66.00%), Postives = 164/200 (82.00%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALP--SDDQNPSESRREINSDP 60
           M F+KDLNL+ATELRLGLPG+S  ++S  I    SNKRALP  +DD   + ++       
Sbjct: 1   MVFEKDLNLDATELRLGLPGSS--EESLRI----SNKRALPDMNDDSGVAAAK------- 60

Query: 61  TKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRK 120
            KC+QE  PPTKAQVVGWPP+RS+RKN  Q+KK E     A T+GM++KVSMDGAP+LRK
Sbjct: 61  -KCDQETAPPTKAQVVGWPPIRSYRKNSLQTKKIE-----AETSGMYVKVSMDGAPYLRK 120

Query: 121 VDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180
           +DLK+Y+GYP+L +ALE+MFKF +GK+SEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF
Sbjct: 121 IDLKVYKGYPELFKALEDMFKFKVGKYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180

Query: 181 MSSCKKLRIMKGSEAKGLGC 199
           +++CK+LRI++GSEA+GLGC
Sbjct: 181 INACKRLRIVRGSEARGLGC 181

[Close]
BLAST of Lsi11G004460 vs. TrEMBL
Match: A0A0D2SKX3_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_007G277000 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.8e-67
Identity = 131/200 (65.50%), Postives = 162/200 (81.00%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALP--SDDQNPSESRREINSDP 60
           M F+KDLNL+ATELRLGLPG+S  ++S  I    SNKRALP  +DD   + ++       
Sbjct: 1   MVFEKDLNLDATELRLGLPGSS--EESIRI----SNKRALPDMNDDSGVAAAK------- 60

Query: 61  TKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRK 120
            KC+QE  PPTKAQVVGWPP+RS+RKN  Q+KK E     A T GM++KVSMDGAP+LRK
Sbjct: 61  -KCDQETAPPTKAQVVGWPPIRSYRKNSLQTKKTE-----AETGGMYVKVSMDGAPYLRK 120

Query: 121 VDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180
           +DLK+Y+GYP+L +A+E+MFKF +GK+SEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF
Sbjct: 121 IDLKVYKGYPELFKAMEDMFKFKVGKYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180

Query: 181 MSSCKKLRIMKGSEAKGLGC 199
           ++ CK+LRI++GSEA+GLGC
Sbjct: 181 INGCKRLRIVRGSEARGLGC 181

[Close]
BLAST of Lsi11G004460 vs. TAIR10
Match: AT5G43700.1 (AT5G43700.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 230.3 bits (586), Expect = 1.0e-60
Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 1 

Query: 3   FDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTKCN 62
           +D+ +NL+ATELRLGLPGT        ++   SNKR LP   +   ES  +         
Sbjct: 7   YDELVNLKATELRLGLPGTE-----ETVSCGKSNKRVLPEATEKEIESTGKT-------- 66

Query: 63  QENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVDLK 122
            E   P KAQ+VGWPPVRS+RKN  Q+KK E         G ++KVSMDGAP+LRK+DL 
Sbjct: 67  -ETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQ-----GNYVKVSMDGAPYLRKIDLT 126

Query: 123 IYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSC 182
           +Y+ YP+L+++LENMFKFS+G++ EREGY GS+FVPTYEDKDGDWMLVGDVPWEMF+SSC
Sbjct: 127 MYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSC 186

Query: 183 KKLRIMKGSEAKGLGCGSV 202
           K+LRIMKGSE KGLGCG +
Sbjct: 187 KRLRIMKGSEVKGLGCGGL 186

[Close]
BLAST of Lsi11G004460 vs. TAIR10
Match: AT1G04240.1 (AT1G04240.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 228.0 bits (580), Expect = 5.1e-60
Identity = 120/200 (60.00%), Postives = 148/200 (74.00%), Query Frame = 1 

Query: 4   DKDLNLEATELRLGLPGTS----PDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPT 63
           D+ +NL+ TELRLGLPGT       ++ S  N  N+NKR L +D +      +EI S   
Sbjct: 2   DEFVNLKETELRLGLPGTDNVCEAKERVSCCN--NNNKRVLSTDTE------KEIESSSR 61

Query: 64  KCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKV 123
           K   E  PP KAQ+VGWPPVRS+RKN  QSKK E         G+++KVSMDGAP+LRK+
Sbjct: 62  KT--ETSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQ---GIYVKVSMDGAPYLRKI 121

Query: 124 DLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 183
           DL  Y+GY +LL+ALE MFKFS+G++ ER+GY GS+FVPTYEDKDGDWML+GDVPWEMF+
Sbjct: 122 DLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFI 181

Query: 184 SSCKKLRIMKGSEAKGLGCG 200
            +CK+LRIMKGSEAKGLGCG
Sbjct: 182 CTCKRLRIMKGSEAKGLGCG 188

[Close]
BLAST of Lsi11G004460 vs. TAIR10
Match: AT4G14560.1 (AT4G14560.1 indole-3-acetic acid inducible)

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-52
Identity = 108/193 (55.96%), Postives = 132/193 (68.39%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTK 60
           M     LNL+ TELRLGLPG   + Q       ++NKR                N+D T+
Sbjct: 1   MEVTNGLNLKDTELRLGLPGAQEEQQLELSCVRSNNKRK---------------NNDSTE 60

Query: 61  CNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVD 120
             +  PPP K Q+VGWPPVRS RKN   +  K  +         ++KVSMDGAP+LRK+D
Sbjct: 61  --ESAPPPAKTQIVGWPPVRSNRKN---NNNKNVS---------YVKVSMDGAPYLRKID 120

Query: 121 LKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMS 180
           LK+Y+ YP+LL+ALENMFKF++G++SEREGY GS FVPTYEDKDGDWMLVGDVPW+MF S
Sbjct: 121 LKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSS 164

Query: 181 SCKKLRIMKGSEA 194
           SC+KLRIMKGSEA
Sbjct: 181 SCQKLRIMKGSEA 164

[Close]
BLAST of Lsi11G004460 vs. TAIR10
Match: AT3G23030.1 (AT3G23030.1 indole-3-acetic acid inducible 2)

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50
Identity = 105/199 (52.76%), Postives = 132/199 (66.33%), Query Frame = 1 

Query: 1   MAFDK--DLNLEATELRLGLPG-TSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSD 60
           MA++K  +LNL+ TEL LGLPG T    +   ++   SN + L                +
Sbjct: 1   MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRL---------------FE 60

Query: 61  PTKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLR 120
            T+  +E+ PPTK Q+VGWPPVRS RKN                +  ++KVSMDGAP+LR
Sbjct: 61  ETRDEEESTPPTKTQIVGWPPVRSSRKN--------------NNSVSYVKVSMDGAPYLR 120

Query: 121 KVDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEM 180
           K+DLK Y+ YP+LL+ALENMFK  +G++ EREGY GS FVPTYEDKDGDWMLVGDVPW+M
Sbjct: 121 KIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDM 170

Query: 181 FMSSCKKLRIMKGSEAKGL 197
           F SSCK+LRIMKGS+A  L
Sbjct: 181 FSSSCKRLRIMKGSDAPAL 170

[Close]
BLAST of Lsi11G004460 vs. TAIR10
Match: AT4G14550.1 (AT4G14550.1 indole-3-acetic acid inducible 14)

HSP 1 Score: 171.4 bits (433), Expect = 5.7e-43
Identity = 103/217 (47.47%), Postives = 133/217 (61.29%), Query Frame = 1 

Query: 7   LNLEATELRLGLPGTSPDDQSSPINRTNSNKRA------LPSDDQNPSESRREINS---- 66
           +NL+ TEL LGLPG + +   SP      NKR       L  + Q+  +   ++N+    
Sbjct: 1   MNLKETELCLGLPGGT-ETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAP 60

Query: 67  -DPTKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAG---MFIKVSMDG 126
            + T     + PP KAQVVGWPPVR++RKN   ++K  EA  A ++ G    F+KVSMDG
Sbjct: 61  KEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDG 120

Query: 127 APFLRKVDLKIYQGYPDLLQALENMFK-FSLGKFSER------------EGYNGSEFVPT 186
           AP+LRKVDLK+Y  Y DL  AL  MF  F++G +  +            +  N SE+VP+
Sbjct: 121 APYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPS 180

Query: 187 YEDKDGDWMLVGDVPWEMFMSSCKKLRIMKGSEAKGL 197
           YEDKDGDWMLVGDVPW MF+ SCK+LRIMKGSEA GL
Sbjct: 181 YEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

[Close]
BLAST of Lsi11G004460 vs. NCBI nr
Match: gi|659070637|ref|XP_008455974.1| (PREDICTED: auxin-induced protein 22D-like [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 9.5e-101
Identity = 189/202 (93.56%), Postives = 192/202 (95.05%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQS-SPINRTNSNKRALPSDDQNPSESRREINSDPT 60
           MAF+KDLNLEATELRLGLPGTSPDDQS SPINRTNSNKRALPSDDQNP ESRREINSDP+
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKV 120
           KC QEN PPTKAQVVGWPPVRSFRKNC Q+KKKEEAAA    AGMFIKVSMDGAPFLRKV
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAA----AGMFIKVSMDGAPFLRKV 120

Query: 121 DLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 180
           DLKIYQGYPDLLQALENMFKFSLGKF EREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM
Sbjct: 121 DLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 180

Query: 181 SSCKKLRIMKGSEAKGLGCGSV 202
           SSCKKLRIMKGSEAKGLGCGSV
Sbjct: 181 SSCKKLRIMKGSEAKGLGCGSV 198

[Close]
BLAST of Lsi11G004460 vs. NCBI nr
Match: gi|449442931|ref|XP_004139234.1| (PREDICTED: auxin-responsive protein IAA4 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.3e-97
Identity = 185/202 (91.58%), Postives = 189/202 (93.56%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQS-SPINRTNSNKRALPSDDQNPSESRREINSDPT 60
           MAF+KDLNLEATELRLGLPGTSPDDQS SPINRTNSNKRALPSDDQN SESRREINSD +
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60

Query: 61  KCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKV 120
           KC+QEN PPTKAQVVGWPPVRSFRKN  Q+KKKEE A     AGMFIKVSMDGAPFLRKV
Sbjct: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETA-----AGMFIKVSMDGAPFLRKV 120

Query: 121 DLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 180
           DLKIYQGYPDLLQALENMFKFSLGKF EREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM
Sbjct: 121 DLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 180

Query: 181 SSCKKLRIMKGSEAKGLGCGSV 202
           SSCKKLRIMKGSEAKGLGCGSV
Sbjct: 181 SSCKKLRIMKGSEAKGLGCGSV 197

[Close]
BLAST of Lsi11G004460 vs. NCBI nr
Match: gi|6136834|dbj|BAA85822.1| (Aux/IAA protein [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 4.8e-84
Identity = 162/179 (90.50%), Postives = 166/179 (92.74%), Query Frame = 1 

Query: 12  TELRLGLPGTSPDDQS-SPINRTNSNKRALPSDDQNPSESRREINSDPTKCNQENPPPTK 71
           TELRLGLPGTSPDDQS SPINRTNSNKRALPSDDQN SESRREINSD +KC+QEN PPTK
Sbjct: 1   TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 60

Query: 72  AQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVDLKIYQGYPDL 131
           AQVVGWPPVRSFRKN  Q+KKKEE A     AGMFIKVSMDGAPFLRKVDLKIYQGYPDL
Sbjct: 61  AQVVGWPPVRSFRKNSLQAKKKEETA-----AGMFIKVSMDGAPFLRKVDLKIYQGYPDL 120

Query: 132 LQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMK 190
           LQALENMFKFSLGKF EREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK+LRIMK
Sbjct: 121 LQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 174

[Close]
BLAST of Lsi11G004460 vs. NCBI nr
Match: gi|590642621|ref|XP_007030568.1| (AUX/IAA transcriptional regulator family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 271.9 bits (694), Expect = 8.7e-70
Identity = 133/198 (67.17%), Postives = 160/198 (80.81%), Query Frame = 1 

Query: 1   MAFDKDLNLEATELRLGLPGTSPDDQSSPINRTNSNKRALPSDDQNPSESRREINSDPTK 60
           MAF+KDLNL+AT LRLGLPGTS +  S+      SNKRALP  ++          +D  K
Sbjct: 1   MAFEKDLNLDATALRLGLPGTSEEQTSAS---GKSNKRALPDMNEESVSGDNSNVADARK 60

Query: 61  CNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPFLRKVD 120
           C+QE  PP+KAQVVGWPP+RS+RKNC Q KK E     A  AG+++KVSMDGAP+LRK+D
Sbjct: 61  CDQETAPPSKAQVVGWPPIRSYRKNCLQPKKTE-----AEAAGIYVKVSMDGAPYLRKID 120

Query: 121 LKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMS 180
           LK+Y+GYP+LL+ALE+MFKF +G++SEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF +
Sbjct: 121 LKVYKGYPELLKALEDMFKFKVGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFTN 180

Query: 181 SCKKLRIMKGSEAKGLGC 199
           SCK+LRIMKGSEA+GLGC
Sbjct: 181 SCKRLRIMKGSEARGLGC 190

[Close]
BLAST of Lsi11G004460 vs. NCBI nr
Match: gi|1009117511|ref|XP_015875356.1| (PREDICTED: auxin-induced protein 22D-like [Ziziphus jujuba])

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-67
Identity = 133/203 (65.52%), Postives = 161/203 (79.31%), Query Frame = 1 

Query: 1   MAF--DKDLNLEATELRLGLPGTS---PDDQSSPINRTNSNKRALPSDDQNPSESRREIN 60
           MAF  D DLNLEATELRLGLPG +   P D+++P +    +KRAL  DD    +    + 
Sbjct: 1   MAFERDHDLNLEATELRLGLPGRAEDQPTDKNTPFSGVRGSKRALNEDDSKTKDFSNAL- 60

Query: 61  SDPTKCNQENPPPTKAQVVGWPPVRSFRKNCFQSKKKEEAAAAAATAGMFIKVSMDGAPF 120
            D  K +QE+ PPTKAQVVGWPPVRS+RKNC Q+KK E   A+    G+++KVSMDGAP+
Sbjct: 61  -DTKKSDQESVPPTKAQVVGWPPVRSYRKNCLQAKKTESDLAS----GIYVKVSMDGAPY 120

Query: 121 LRKVDLKIYQGYPDLLQALENMFKFSLGKFSEREGYNGSEFVPTYEDKDGDWMLVGDVPW 180
           LRK+DLK+Y GY +LL+ALE+MFKF +G +SEREGYNGSE+VPTYEDKDGDWMLVGDVPW
Sbjct: 121 LRKMDLKVYNGYSELLKALEDMFKFKVGNYSEREGYNGSEYVPTYEDKDGDWMLVGDVPW 180

Query: 181 EMFMSSCKKLRIMKGSEAKGLGC 199
           EMF+SSCK+LRIMKGSEA+GLGC
Sbjct: 181 EMFISSCKRLRIMKGSEARGLGC 197

The following BLAST results are available for this feature:
BLAST of Lsi11G004460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AX22D_VIGRR2.5e-6161.93Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1[more]
AX22E_VIGRR1.6e-6056.80Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1[more]
IAA4_ARATH1.8e-5958.79Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1 SV=2[more]
IAA3_ARATH9.0e-5960.00Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1[more]
AX22B_VIGRR2.9e-5756.00Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1[more]
BLAST of Lsi11G004460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LID4_CUCSA9.0e-9891.58Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G011420 PE=3 SV=1[more]
Q9SSY1_CUCSA3.3e-8490.50Auxin-responsive protein (Fragment) OS=Cucumis sativus GN=CsIAA3 PE=2 SV=1[more]
A0A061F147_THECC6.1e-7067.17Auxin-responsive protein OS=Theobroma cacao GN=TCM_026344 PE=3 SV=1[more]
A0A0B0N1Z3_GOSAR2.8e-6766.00Auxin-responsive protein OS=Gossypium arboreum GN=F383_30912 PE=3 SV=1[more]
A0A0D2SKX3_GOSRA4.8e-6765.50Auxin-responsive protein OS=Gossypium raimondii GN=B456_007G277000 PE=3 SV=1[more]
BLAST of Lsi11G004460 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43700.11.0e-6058.79 AUX/IAA transcriptional regulator family protein[more]
AT1G04240.15.1e-6060.00 AUX/IAA transcriptional regulator family protein[more]
AT4G14560.13.0e-5255.96 indole-3-acetic acid inducible[more]
AT3G23030.11.3e-5052.76 indole-3-acetic acid inducible 2[more]
AT4G14550.15.7e-4347.47 indole-3-acetic acid inducible 14[more]
BLAST of Lsi11G004460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070637|ref|XP_008455974.1|9.5e-10193.56PREDICTED: auxin-induced protein 22D-like [Cucumis melo][more]
gi|449442931|ref|XP_004139234.1|1.3e-9791.58PREDICTED: auxin-responsive protein IAA4 [Cucumis sativus][more]
gi|6136834|dbj|BAA85822.1|4.8e-8490.50Aux/IAA protein [Cucumis sativus][more]
gi|590642621|ref|XP_007030568.1|8.7e-7067.17AUX/IAA transcriptional regulator family protein isoform 1 [Theobroma cacao][more]
gi|1009117511|ref|XP_015875356.1|3.1e-6765.52PREDICTED: auxin-induced protein 22D-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR003311AUX_IAA
IPR000270PB1_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G004460.1Lsi11G004460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 103..190
score: 26
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 1..199
score: 7.7E
NoneNo IPR availablePANTHERPTHR31734:SF11AUXIN-RESPONSIVE PROTEIN IAA1-RELATEDcoord: 1..199
score: 7.7E
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 100..189
score: 5.43

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G004460CmoCh05G012250Cucurbita moschata (Rifu)cmolsiB706
Lsi11G004460MELO3C004381.2Melon (DHL92) v3.6.1lsimedB123
Lsi11G004460Cla97C02G042420Watermelon (97103) v2lsiwmbB087
Lsi11G004460Cla97C09G170150Watermelon (97103) v2lsiwmbB110
Lsi11G004460Bhi06G001520Wax gourdlsiwgoB108
Lsi11G004460Bhi09G000921Wax gourdlsiwgoB139
Lsi11G004460Cp4.1LG00g04230Cucurbita pepo (Zucchini)cpelsiB004
Lsi11G004460Cp4.1LG11g09980Cucurbita pepo (Zucchini)cpelsiB074
Lsi11G004460CsGy2G003100Cucumber (Gy14) v2cgyblsiB089
Lsi11G004460CsGy7G014390Cucumber (Gy14) v2cgyblsiB467
Lsi11G004460Carg17598Silver-seed gourdcarlsiB654
Lsi11G004460Carg23452Silver-seed gourdcarlsiB271
Lsi11G004460CsaV3_7G027610Cucumber (Chinese Long) v3cuclsiB532
Lsi11G004460CsaV3_2G004130Cucumber (Chinese Long) v3cuclsiB108
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi11G004460Lsi02G022430Bottle gourd (USVL1VR-Ls)lsilsiB050
Lsi11G004460Lsi05G016620Bottle gourd (USVL1VR-Ls)lsilsiB056
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G004460Watermelon (Charleston Gray)lsiwcgB077
Lsi11G004460Watermelon (Charleston Gray)lsiwcgB098
Lsi11G004460Watermelon (97103) v1lsiwmB090
Lsi11G004460Watermelon (97103) v1lsiwmB107
Lsi11G004460Cucumber (Gy14) v1cgylsiB205
Lsi11G004460Cucurbita maxima (Rimu)cmalsiB098
Lsi11G004460Cucurbita maxima (Rimu)cmalsiB159
Lsi11G004460Cucurbita maxima (Rimu)cmalsiB715
Lsi11G004460Cucurbita moschata (Rifu)cmolsiB084
Lsi11G004460Cucurbita moschata (Rifu)cmolsiB148
Lsi11G004460Cucurbita pepo (Zucchini)cpelsiB003
Lsi11G004460Cucurbita pepo (Zucchini)cpelsiB659
Lsi11G004460Wild cucumber (PI 183967)cpilsiB096
Lsi11G004460Wild cucumber (PI 183967)cpilsiB510
Lsi11G004460Cucumber (Chinese Long) v2culsiB098
Lsi11G004460Cucumber (Chinese Long) v2culsiB498
Lsi11G004460Melon (DHL92) v3.5.1lsimeB115