Lsi11G003670 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G003670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_43
Location	chr11 : 3794577 .. 3798180 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAACTCTTTCTCACAGCCATAGTGTTAAGTTTATAATGTATTCAACTGAATGTAGAGTAAAAAAAAATGGAAACTTTTTAGATTTTATGCTGTTTTGTTACATTACCATTGGAAGCCCATTAAATTTTTCAATACACCGATTCCTCCAGAAGAAATCTTCTTAGCTAAAGCTTTTATTTTGTATTTTTCCATTCATTTCATTGGTTTCTTTCATACTTTCACTGCTGCAATTAGATCTCAGTTCCTCACTTTCTCAGTAACGCGGAAAGAGAGAGGAAAAATACGACGACGAAGAAAAACAAGAATCAAAAGGAAGATCAGGGTGAGAAATGTCACGCCGATCTGGGGCTTGCCTAAGGTGTTGTCTCGTGATTTTTGCTGTAGTTTCTGCTCTGGCTGTTTGTGGACCGGCTTTGTATTGGAGATTCAAGAAGGCTTTCCAATTGGGAGATTCCAAAGCCTCCTGTCCTCCTTGCATCTGCGATTGTCCACCCCCATTATCCCTTTTGAAGATTTCCCCTGGTAATACTCGTTAATCTCTTCTGGGTTGCTTTGCATTTCTGTTTTTCTTTGCTTAGTTGTGAAATTTAGTGAAATTAACAGATACCCATTTGAAGAATTTGGTGGTTTGATCTGTTTCCATTGATGATTTCGATTCTTAGCTGTTTCTCTCTTTGCTTGTGTGTTGCTGTTAATGGCTATGGAAAACTTGACCCATATTAGATTTGGATTTGTACTCCTTTTGTTACCTTCTGTTGGGCTTAATGGAGCTAGATTAAGCCCTATCTCAGGTTAGATTATTGGTTTTCTGTTGGGAAACTTTTCAAGAATTTGTGCTTTTCTTCACCGGTGCCTTTTGGAGTAACAACACTCGTCTATAGATAGAATTTTACTACTCTTTTTCGATGCTGTACTTGTTGAATTGATCTTTTGTTGGTTCTTAACTGGAGTATGTCTCAAGTGGCATTCGATCTGAAATTATGAACTTGGATTTCTTTCTTGTAATTCACTTTGAGTTCATGTTTCTGTTTCCCTGGATGTTGTCCCGCTGTGCTGTTTAGTAAATTTTCTCAATTGTGAATTCCTTGTCTGTACTTTGTAGTTTTCAAAGAAAATTCTGTTGGGCTGCAATTATAGATTAGCTAAAACTTGTATTCATTAAAATGAAATGGTAATACCACCGTGACCATCAATGGTTCTTTCTTTGTGTTTCTGAAAACATTGATTTTAGGATTTATTTGGTCCTCTTCTTATTTTGCTATCATAATTAACTTCTTGAAGTATCCATTTGCTTAGCTAGGAAAAGAAGTCTATGGAAGCTCAACCATTTTGCTAGAAAAAGAATTCTACATAACTCTATCCTGTTAAATTAGCAATGGCCGTTTGGAATTGCATCTTAAATGAATATTTTCTGAACCTAATTCTATTTTTTTTGGAAGAAAGAAAAAAATTTATTTTAATATAAATTGCATCCTGATAGCAAAGGCTTCAGATATTTGGGTTAAGTTCCCTAAGGGTCTTGGGTTGAAGCCTCTAGGAGAAAGCTAATATCCTTGATGTTTCTTGGAACTGGTGTTAGCGCACCTTTCGTTGTGAAGTACCATATATGTAAACGTAATATGTAGCTGCATATAAATTGCTCAAACCTAATTTACCAAATGTAATATGTAGCTGCATATAAATTGCTCAAACCTAATTTACCAAATGCAGATTCTTTTATTAGATTTTTGTTCTCCTCTCTTAGAAGGACTGCATTTGATTCCATGTAATTGTAGACTTGATTTGTGTTCTTACCAGATTTGTTTTTGCTTACTCACTAATACGTCTTTTCTTTTTTCTTGATTATTCATTTTCAGGTCTGGCCAATCTCTCCGTCACAGGTTAGAATTCATCCCTCCAAATCAACTTGGCAATGAACTTTGCTGTCCTCATTATGTGAAAATCATGATTCTTTACTTGTTTTACTAGCATTGGAATGCTTGTTATGGTTCAGAACTAAACTTGTGTGCTCTCTGTTTTTATGGAGAAACATATGCAGCTTTCATTACATTTTTCTTCCATCATCCATTTCCATGACATATATTTAAGGTTAAGTTGTTTTTGTCTTAGATCCGACATTTTCTTGTTGTTCTATTATGGATCAGAACTCTTGAAAAAATTATGCGTTATGCCCTTCATTAAAGGGATTCTGCCAACCATTTTCTTCTAGTTCTTGATGTTCATCGATATAATGTGTGCACACTACTTGTTGCTGTGGGCGTCAATTATCGGGATTCTGCCAACCATTTTCTTCTAGTTCTTGATGTTCATCGATATAATATGTGCACACTACTTGTTGCTGTGGGCGTCAATTATCATACGTCTAAAAATCTCTCTTCCAATATTATGTTGGGTCCACAGAAGTCTCAGCTCCCTTTCCCTGTCTTCTACCTTTATAATATGAAAGGGACGATTCAATCTAGGGTGGCCATTTATCTAAAATTTAATATCATACAAGTTTTTTTGGAACTCAAATGTTGTAGGGCTAGACGGATTGTCAAGTGAGATTAGTCGAGGTACATGTAAGCTGGCTTAGACACTCACGAATGTTTAAAGAGGAGAGGAGGAGGAGGGGGAGGGGGAGGCTGTGGGTTTTTCACTTCTTGAGTTGGGAACTTTTCAAGGAGAAAATATCACATAGGCTTTTAGCTACTTCATACTGGAATTCTTGGAATTTGAAAGTTGGAATTTATCTTGTTCAAGCTTGAAACTTATTTTGATATTTGTGTTATTTCCAAACTTGATTTCGGCTAGTTATTCAAATGCTCTTGTAACATCTGCTTATTTATTCCTCGACTTTTTTTTATGCACATGCTCACTTATTTTTATGATACAGACTGCGGTAGTAATGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGACCTTTTGACAGAGGAATTGAAGCTTCAAGAAGCAGTTTCTGGCGAATATACTCGCCATATGAACATCACTTTATTCGAGGCAAAAAGGGCAGCTTCTCAGTATCAGAGGGAGGCTGAAAAGTGCATTGCTGCAACAGAAACTTGTGAAGAGGCCCGAGAACGCGCCGAGGCATTGATGATCAAGGAGAGGAAGCTTACATCATTGTGGGAGCGACGAGCCCGCCAAATGGGTTGGGAAGGAGAATAAGTCTATAATTTCAAAGGCCAACCTCTTAGTTCAACTAGTCGTCGAGTCCTTCAATCCATGAGATCAGTAGAAACTGGCAAGCGAAGCGCTTGGTTCATCAATCTGTCAAGGCATAATGTTCTCTCTTTTCCTCCATTAATTGTGTCGTACATTTCCTGGAAACATGTCAATTCTACATCATAATTCATACATTACAATGTTATAGATCCCACTCTTCTTCTGCATTTGCTAATATATATATATATATATGATTATCTCCTCTTCAACCGTAGCTATGTGACTTGTTGGCTAGGCATTTCTAAGCCGTCCACGAGCTCAAATAGACCGTATTATTCGAATTCTCATAATGGAAAACTATGTTGTTCTCAGGTTTAGCACCAGGTTGATTCCCTGGTAAGTGATGTTAGTAAAATCTGCTTTTCATA

mRNA sequence

ATTAACTCTTTCTCACAGCCATAGTGTTAAGTTTATAATGTATTCAACTGAATGTAGAGTAAAAAAAAATGGAAACTTTTTAGATTTTATGCTGTTTTGTTACATTACCATTGGAAGCCCATTAAATTTTTCAATACACCGATTCCTCCAGAAGAAATCTTCTTAGCTAAAGCTTTTATTTTGTATTTTTCCATTCATTTCATTGGTTTCTTTCATACTTTCACTGCTGCAATTAGATCTCAGTTCCTCACTTTCTCAGTAACGCGGAAAGAGAGAGGAAAAATACGACGACGAAGAAAAACAAGAATCAAAAGGAAGATCAGGGTGAGAAATGTCACGCCGATCTGGGGCTTGCCTAAGGTGTTGTCTCGTGATTTTTGCTGTAGTTTCTGCTCTGGCTGTTTGTGGACCGGCTTTGTATTGGAGATTCAAGAAGGCTTTCCAATTGGGAGATTCCAAAGCCTCCTGTCCTCCTTGCATCTGCGATTGTCCACCCCCATTATCCCTTTTGAAGATTTCCCCTGGTCTGGCCAATCTCTCCGTCACAGGGCTAGACGGATTGTCAAGTGAGATTAGTCGAGACTGCGGTAGTAATGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGACCTTTTGACAGAGGAATTGAAGCTTCAAGAAGCAGTTTCTGGCGAATATACTCGCCATATGAACATCACTTTATTCGAGGCAAAAAGGGCAGCTTCTCAGTATCAGAGGGAGGCTGAAAAGTGCATTGCTGCAACAGAAACTTGTGAAGAGGCCCGAGAACGCGCCGAGGCATTGATGATCAAGGAGAGGAAGCTTACATCATTGTGGGAGCGACGAGCCCGCCAAATGGGTTGGGAAGGAGAATAAGTCTATAATTTCAAAGGCCAACCTCTTAGTTCAACTAGTCGTCGAGTCCTTCAATCCATGAGATCAGTAGAAACTGGCAAGCGAAGCGCTTGGTTCATCAATCTGTCAAGGCATAATGTTCTCTCTTTTCCTCCATTAATTGTGTCGTACATTTCCTGGAAACATGTCAATTCTACATCATAATTCATACATTACAATGTTATAGATCCCACTCTTCTTCTGCATTTGCTAATATATATATATATATATGATTATCTCCTCTTCAACCGTAGCTATGTGACTTGTTGGCTAGGCATTTCTAAGCCGTCCACGAGCTCAAATAGACCGTATTATTCGAATTCTCATAATGGAAAACTATGTTGTTCTCAGGTTTAGCACCAGGTTGATTCCCTGGTAAGTGATGTTAGTAAAATCTGCTTTTCATA

Coding sequence (CDS)

ATGTCACGCCGATCTGGGGCTTGCCTAAGGTGTTGTCTCGTGATTTTTGCTGTAGTTTCTGCTCTGGCTGTTTGTGGACCGGCTTTGTATTGGAGATTCAAGAAGGCTTTCCAATTGGGAGATTCCAAAGCCTCCTGTCCTCCTTGCATCTGCGATTGTCCACCCCCATTATCCCTTTTGAAGATTTCCCCTGGTCTGGCCAATCTCTCCGTCACAGGGCTAGACGGATTGTCAAGTGAGATTAGTCGAGACTGCGGTAGTAATGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGACCTTTTGACAGAGGAATTGAAGCTTCAAGAAGCAGTTTCTGGCGAATATACTCGCCATATGAACATCACTTTATTCGAGGCAAAAAGGGCAGCTTCTCAGTATCAGAGGGAGGCTGAAAAGTGCATTGCTGCAACAGAAACTTGTGAAGAGGCCCGAGAACGCGCCGAGGCATTGATGATCAAGGAGAGGAAGCTTACATCATTGTGGGAGCGACGAGCCCGCCAAATGGGTTGGGAAGGAGAATAA

Protein sequence

MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLLKISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTRHMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGWEGE

Homology

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BLAST of Lsi11G003670 vs. TrEMBL
Match: A0A0A0LG38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008730 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.9e-86
Identity = 168/183 (91.80%), Postives = 170/183 (92.90%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRSGACLRCCLV FAVVSALAVCGPALYWRFKKA QLGDSKASCPPCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KISPGLANLSVT           DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGE+TR
Sbjct: 61  KISPGLANLSVT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERK+TSLWERRARQMGW
Sbjct: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKVTSLWERRARQMGW 172

Query: 181 EGE 184
           EGE
Sbjct: 181 EGE 172

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BLAST of Lsi11G003670 vs. TrEMBL
Match: A0A061GJK9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037096 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 6.7e-76
Identity = 148/183 (80.87%), Postives = 161/183 (87.98%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRR+G CLR CLVIFAVVSAL VCGPALYWRFKK  +LGDSK+SCPPCICDCPPPLSLL
Sbjct: 1   MSRRAGTCLRLCLVIFAVVSALGVCGPALYWRFKKTLRLGDSKSSCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLSVT           DCGS+DPDLKQEMEKQFVDLLTEELKLQEAV+ E+ R
Sbjct: 61  KIAPGLANLSVT-----------DCGSSDPDLKQEMEKQFVDLLTEELKLQEAVTAEHAR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           H+NIT  EAKR ASQYQREAEKCIAATETCE ARERAEAL+I+ERK+T+LWE+RARQMGW
Sbjct: 121 HVNITFGEAKRVASQYQREAEKCIAATETCEGARERAEALLIRERKVTTLWEQRARQMGW 172

Query: 181 EGE 184
           EGE
Sbjct: 181 EGE 172

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BLAST of Lsi11G003670 vs. TrEMBL
Match: M5VR86_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012368mg PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-75
Identity = 148/182 (81.32%), Postives = 157/182 (86.26%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRS  CLRCCLV+FAVVSAL VCGPALYWRFKK+ +LGDSK SCP C CDCPPPLSLL
Sbjct: 1   MSRRSATCLRCCLVVFAVVSALGVCGPALYWRFKKSIRLGDSKTSCPTCNCDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLSVT           DCGSNDPDLKQEMEKQFVDLLTEELKLQEAV+ E+TR
Sbjct: 61  KIAPGLANLSVT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVAAEHTR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMNIT  EAKR ASQYQ+EAEKC AATETCEEARERA+AL IKERK+T LWERRARQMGW
Sbjct: 121 HMNITFAEAKRVASQYQKEAEKCNAATETCEEARERAQALFIKERKVTLLWERRARQMGW 171

Query: 181 EG 183
           EG
Sbjct: 181 EG 171

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BLAST of Lsi11G003670 vs. TrEMBL
Match: W9SA01_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016882 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-75
Identity = 148/182 (81.32%), Postives = 158/182 (86.81%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKK   LG+SK SCPPCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKGINLGNSKNSCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLS+T           DCGSNDPDLKQEMEKQFVDLLTEELKLQE+VS E+ R
Sbjct: 61  KIAPGLANLSIT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQESVSEEHNR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMN+T  EAKR ASQYQ+EAEKC AATETCE ARERAEAL+IKERK TS+WE+RA QMGW
Sbjct: 121 HMNVTFAEAKRIASQYQKEAEKCNAATETCEGARERAEALLIKERKATSMWEQRALQMGW 171

Query: 181 EG 183
           EG
Sbjct: 181 EG 171

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BLAST of Lsi11G003670 vs. TrEMBL
Match: A0A067KQZ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03999 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.7e-75
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKK      SK SCPPCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKTIGFSGSKISCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLSVT           DCGS+DPDLK+EMEKQF+DLL+EELKLQEAV+ E+  
Sbjct: 61  KIAPGLANLSVT-----------DCGSDDPDLKREMEKQFIDLLSEELKLQEAVAEEHAH 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMNIT  EAKR ASQYQ+EAEKC AATETCEEARERAEAL+IKERK+TSLWERRARQ+GW
Sbjct: 121 HMNITFAEAKRVASQYQKEAEKCNAATETCEEARERAEALLIKERKVTSLWERRARQLGW 172

Query: 181 EGE 184
           EGE
Sbjct: 181 EGE 172

[Close]

BLAST of Lsi11G003670 vs. TAIR10
Match: AT4G30996.1 (AT4G30996.1 Protein of unknown function (DUF1068))

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-70
Identity = 137/185 (74.05%), Postives = 157/185 (84.86%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKAS--CPPCICDCPPPLS 60
           M RRSG C+RC LVIFAVVSAL VCGPALYW+F K F +G ++A+  CPPC+CDCPPPLS
Sbjct: 1   MPRRSGDCMRC-LVIFAVVSALVVCGPALYWKFNKGF-VGSTRANSLCPPCVCDCPPPLS 60

Query: 61  LLKISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEY 120
           LL+I+PGLANLS+T           DCGS+DP+LKQEMEKQFVDLLTEELKLQEAV+ E+
Sbjct: 61  LLQIAPGLANLSIT-----------DCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEH 120

Query: 121 TRHMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQM 180
           +RHMN+TL EAKR ASQYQ+EAEKC AATE CE ARERAEAL+IKERK+TSLWE+RARQ 
Sbjct: 121 SRHMNVTLAEAKRVASQYQKEAEKCNAATEICESARERAEALLIKERKITSLWEKRARQS 172

Query: 181 GWEGE 184
           GWEGE
Sbjct: 181 GWEGE 172

[Close]

BLAST of Lsi11G003670 vs. TAIR10
Match: AT2G24290.1 (AT2G24290.1 Protein of unknown function (DUF1068))

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-66
Identity = 129/186 (69.35%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKAS---CPPCICDCPPPL 60
           M+RRSG C+RC LVIF+VVSAL VCGPALYW+  K F +G ++++   CPPC+CD PPPL
Sbjct: 1   MARRSGNCMRC-LVIFSVVSALLVCGPALYWKLNKGF-VGSARSTNSICPPCVCDFPPPL 60

Query: 61  SLLKISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGE 120
           SLL+I+PGLANLS+TG           CGS+DP+LK+EMEK FVDLLTEELKLQEAV+ E
Sbjct: 61  SLLQIAPGLANLSITG-----------CGSDDPELKEEMEKPFVDLLTEELKLQEAVADE 120

Query: 121 YTRHMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQ 180
           ++RHMN+TL EAKR ASQYQ+EAEKC AATE CE ARERA+AL++KERK+T LWERRARQ
Sbjct: 121 HSRHMNVTLAEAKRVASQYQKEAEKCNAATEICESARERAQALLLKERKITFLWERRARQ 173

Query: 181 MGWEGE 184
           +GWEGE
Sbjct: 181 LGWEGE 173

[Close]

BLAST of Lsi11G003670 vs. TAIR10
Match: AT2G32580.1 (AT2G32580.1 Protein of unknown function (DUF1068))

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 76/175 (43.43%), Postives = 107/175 (61.14%), Query Frame = 1


Query: 7   ACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLLKISPGL 66
           A L+  L + A+     + GP LYW   +A  L  S  SC  C+CDC   L LL I  GL
Sbjct: 6   AALKVGLALLALSMIGYILGPPLYWHLTEA--LAVSATSCSACVCDCSS-LPLLTIPTGL 65

Query: 67  ANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTRHMNITL 126
           +N S T           DC   DP++ ++ EK + +LLTEELK +EA S E  + ++  L
Sbjct: 66  SNGSFT-----------DCAKRDPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGL 125

Query: 127 FEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGWE 182
            EAK+  S YQ+EA+KC +  ETCEEARE+AE  +++++KLTS+WE+RARQ G++
Sbjct: 126 LEAKKITSSYQKEADKCNSGMETCEEAREKAEKALVEQKKLTSMWEQRARQKGYK 166

[Close]

BLAST of Lsi11G003670 vs. TAIR10
Match: AT1G05070.1 (AT1G05070.1 Protein of unknown function (DUF1068))

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-29
Identity = 74/177 (41.81%), Postives = 103/177 (58.19%), Query Frame = 1


Query: 4   RSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLLKIS 63
           R  A L+  L +  +  A  + GP LYW   +A     S +SCP C C+C    S + I 
Sbjct: 3   RHTAALKIGLALLGLSMAGYILGPPLYWHLTEALA-AVSASSCPSCPCECST-YSAVTIP 62

Query: 64  PGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTRHMN 123
             L+N S             DC  +DP++ ++ EK + +LLTEELKL+EA S E  +  +
Sbjct: 63  KELSNASFA-----------DCAKHDPEVNEDTEKNYAELLTEELKLREAESLEKHKRAD 122

Query: 124 ITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 181
           + L EAK+  S YQ+EA+KC +  ETCEEARE+AE  + +++KLTS WE RARQ GW
Sbjct: 123 MGLLEAKKVTSSYQKEADKCNSGMETCEEAREKAELALAEQKKLTSRWEERARQKGW 166

[Close]

BLAST of Lsi11G003670 vs. TAIR10
Match: AT4G04360.1 (AT4G04360.1 Protein of unknown function (DUF1068))

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-26
Identity = 72/182 (39.56%), Postives = 104/182 (57.14%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDS-KASCPPCICDCPPPLSL 60
           M+RR     +   V+  +     + GP+LYW   +   + DS  +SCPPC+CDC     L
Sbjct: 1   MTRRQKKTAKVVTVVMGLCIVAYIAGPSLYWHLNET--IADSLHSSCPPCVCDCSSQ-PL 60

Query: 61  LKISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYT 120
           L I  GL+N S             DC  ++    +E E  F +++ EELKL+EA + E  
Sbjct: 61  LSIPDGLSNHSFL-----------DCMRHEEG-SEESESSFTEMVAEELKLREAQAQEDE 120

Query: 121 RHMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMG 180
              +  L +AK+AASQYQ+EA+KC    ETCE ARE+AEA + ++R+L+ +WE RARQ G
Sbjct: 121 WRADRLLLDAKKAASQYQKEADKCSMGMETCELAREKAEAALDEQRRLSYMWELRARQGG 167

Query: 181 WE 182
           W+
Sbjct: 181 WK 167

[Close]

BLAST of Lsi11G003670 vs. NCBI nr
Match: gi|659070941|ref|XP_008457359.1| (PREDICTED: uncharacterized protein LOC103497063 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 169/183 (92.35%), Postives = 170/183 (92.90%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRSGACLRCCLV FAVVSALAVCGPALYWRFKKA QLGDSKASCPPCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KISPGLANLSVT           DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGE+TR
Sbjct: 61  KISPGLANLSVT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW
Sbjct: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 172

Query: 181 EGE 184
           EGE
Sbjct: 181 EGE 172

[Close]

BLAST of Lsi11G003670 vs. NCBI nr
Match: gi|449443017|ref|XP_004139277.1| (PREDICTED: uncharacterized protein LOC101212944 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 2.7e-86
Identity = 168/183 (91.80%), Postives = 170/183 (92.90%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRSGACLRCCLV FAVVSALAVCGPALYWRFKKA QLGDSKASCPPCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KISPGLANLSVT           DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGE+TR
Sbjct: 61  KISPGLANLSVT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERK+TSLWERRARQMGW
Sbjct: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKVTSLWERRARQMGW 172

Query: 181 EGE 184
           EGE
Sbjct: 181 EGE 172

[Close]

BLAST of Lsi11G003670 vs. NCBI nr
Match: gi|590572923|ref|XP_007011979.1| (Uncharacterized protein TCM_037096 [Theobroma cacao])

HSP 1 Score: 291.6 bits (745), Expect = 9.7e-76
Identity = 148/183 (80.87%), Postives = 161/183 (87.98%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRR+G CLR CLVIFAVVSAL VCGPALYWRFKK  +LGDSK+SCPPCICDCPPPLSLL
Sbjct: 1   MSRRAGTCLRLCLVIFAVVSALGVCGPALYWRFKKTLRLGDSKSSCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLSVT           DCGS+DPDLKQEMEKQFVDLLTEELKLQEAV+ E+ R
Sbjct: 61  KIAPGLANLSVT-----------DCGSSDPDLKQEMEKQFVDLLTEELKLQEAVTAEHAR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           H+NIT  EAKR ASQYQREAEKCIAATETCE ARERAEAL+I+ERK+T+LWE+RARQMGW
Sbjct: 121 HVNITFGEAKRVASQYQREAEKCIAATETCEGARERAEALLIRERKVTTLWEQRARQMGW 172

Query: 181 EGE 184
           EGE
Sbjct: 181 EGE 172

[Close]

BLAST of Lsi11G003670 vs. NCBI nr
Match: gi|703125702|ref|XP_010103371.1| (hypothetical protein L484_016882 [Morus notabilis])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75
Identity = 148/182 (81.32%), Postives = 158/182 (86.81%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKK   LG+SK SCPPCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKGINLGNSKNSCPPCICDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLS+T           DCGSNDPDLKQEMEKQFVDLLTEELKLQE+VS E+ R
Sbjct: 61  KIAPGLANLSIT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQESVSEEHNR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMN+T  EAKR ASQYQ+EAEKC AATETCE ARERAEAL+IKERK TS+WE+RA QMGW
Sbjct: 121 HMNVTFAEAKRIASQYQKEAEKCNAATETCEGARERAEALLIKERKATSMWEQRALQMGW 171

Query: 181 EG 183
           EG
Sbjct: 181 EG 171

[Close]

BLAST of Lsi11G003670 vs. NCBI nr
Match: gi|595807755|ref|XP_007202663.1| (hypothetical protein PRUPE_ppa012368mg [Prunus persica])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75
Identity = 148/182 (81.32%), Postives = 157/182 (86.26%), Query Frame = 1


Query: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKASCPPCICDCPPPLSLL 60
           MSRRS  CLRCCLV+FAVVSAL VCGPALYWRFKK+ +LGDSK SCP C CDCPPPLSLL
Sbjct: 1   MSRRSATCLRCCLVVFAVVSALGVCGPALYWRFKKSIRLGDSKTSCPTCNCDCPPPLSLL 60

Query: 61  KISPGLANLSVTGLDGLSSEISRDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEYTR 120
           KI+PGLANLSVT           DCGSNDPDLKQEMEKQFVDLLTEELKLQEAV+ E+TR
Sbjct: 61  KIAPGLANLSVT-----------DCGSNDPDLKQEMEKQFVDLLTEELKLQEAVAAEHTR 120

Query: 121 HMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 180
           HMNIT  EAKR ASQYQ+EAEKC AATETCEEARERA+AL IKERK+T LWERRARQMGW
Sbjct: 121 HMNITFAEAKRVASQYQKEAEKCNAATETCEEARERAQALFIKERKVTLLWERRARQMGW 171

Query: 181 EG 183
           EG
Sbjct: 181 EG 171

The following BLAST results are available for this feature:

BLAST of Lsi11G003670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G003670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG38_CUCSA	1.9e-86	91.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008730 PE=4 SV=1	[more]
A0A061GJK9_THECC	6.7e-76	80.87	Uncharacterized protein OS=Theobroma cacao GN=TCM_037096 PE=4 SV=1	[more]
M5VR86_PRUPE	1.5e-75	81.32	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012368mg PE=4 SV=1	[more]
W9SA01_9ROSA	1.5e-75	81.32	Uncharacterized protein OS=Morus notabilis GN=L484_016882 PE=4 SV=1	[more]
A0A067KQZ7_JATCU	5.7e-75	80.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03999 PE=4 SV=1	[more]

BLAST of Lsi11G003670 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30996.1	1.3e-70	74.05	Protein of unknown function (DUF1068)	[more]
AT2G24290.1	1.9e-66	69.35	Protein of unknown function (DUF1068)	[more]
AT2G32580.1	1.0e-30	43.43	Protein of unknown function (DUF1068)	[more]
AT1G05070.1	4.2e-29	41.81	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	7.5e-26	39.56	Protein of unknown function (DUF1068)	[more]

BLAST of Lsi11G003670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070941\|ref\|XP_008457359.1\|	1.2e-86	92.35	PREDICTED: uncharacterized protein LOC103497063 [Cucumis melo]	[more]
gi\|449443017\|ref\|XP_004139277.1\|	2.7e-86	91.80	PREDICTED: uncharacterized protein LOC101212944 [Cucumis sativus]	[more]
gi\|590572923\|ref\|XP_007011979.1\|	9.7e-76	80.87	Uncharacterized protein TCM_037096 [Theobroma cacao]	[more]
gi\|703125702\|ref\|XP_010103371.1\|	2.2e-75	81.32	hypothetical protein L484_016882 [Morus notabilis]	[more]
gi\|595807755\|ref\|XP_007202663.1\|	2.2e-75	81.32	hypothetical protein PRUPE_ppa012368mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003670.1	Lsi11G003670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 7..181 score: 1.2
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 1..183 score: 2.3E
None	No IPR available	PANTHER	PTHR32254:SF4	EXPRESSED PROTEIN	coord: 1..183 score: 2.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G003670	Csa2G008730	Cucumber (Chinese Long) v2	culsiB098
Lsi11G003670	CSPI02G02220	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G003670	Cucsa.132580	Cucumber (Gy14) v1	cgylsiB205
Lsi11G003670	CmaCh12G011740	Cucurbita maxima (Rimu)	cmalsiB159
Lsi11G003670	CmaCh05G012530	Cucurbita maxima (Rimu)	cmalsiB715
Lsi11G003670	CmoCh05G012850	Cucurbita moschata (Rifu)	cmolsiB706
Lsi11G003670	CmoCh12G011980	Cucurbita moschata (Rifu)	cmolsiB148
Lsi11G003670	Cla016660	Watermelon (97103) v1	lsiwmB116
Lsi11G003670	MELO3C004488	Melon (DHL92) v3.5.1	lsimeB112
Lsi11G003670	ClCG11G003550	Watermelon (Charleston Gray)	lsiwcgB078
Lsi11G003670	MELO3C004488.2	Melon (DHL92) v3.6.1	lsimedB120
Lsi11G003670	Cla97C11G210070	Watermelon (97103) v2	lsiwmbB074
Lsi11G003670	Bhi06G001587	Wax gourd	lsiwgoB108
Lsi11G003670	Cp4.1LG07g11150	Cucurbita pepo (Zucchini)	cpelsiB655
Lsi11G003670	Cp4.1LG11g10350	Cucurbita pepo (Zucchini)	cpelsiB074
Lsi11G003670	CsGy2G002320	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G003670	Carg17469	Silver-seed gourd	carlsiB226
Lsi11G003670	Carg10939	Silver-seed gourd	carlsiB514
Lsi11G003670	CsaV3_2G003420	Cucumber (Chinese Long) v3	cuclsiB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G003670	Bottle gourd (USVL1VR-Ls)	lsilsiB057
Lsi11G003670	Cucumber (Gy14) v1	cgylsiB563
Lsi11G003670	Cucurbita maxima (Rimu)	cmalsiB012
Lsi11G003670	Cucurbita maxima (Rimu)	cmalsiB047
Lsi11G003670	Cucurbita moschata (Rifu)	cmolsiB000
Lsi11G003670	Cucurbita moschata (Rifu)	cmolsiB032
Lsi11G003670	Cucurbita moschata (Rifu)	cmolsiB081
Lsi11G003670	Cucurbita moschata (Rifu)	cmolsiB088
Lsi11G003670	Cucurbita pepo (Zucchini)	cpelsiB285
Lsi11G003670	Cucurbita pepo (Zucchini)	cpelsiB527
Lsi11G003670	Cucurbita pepo (Zucchini)	cpelsiB535
Lsi11G003670	Wild cucumber (PI 183967)	cpilsiB014
Lsi11G003670	Cucumber (Chinese Long) v2	culsiB014
Lsi11G003670	Melon (DHL92) v3.5.1	lsimeB101
Lsi11G003670	Watermelon (Charleston Gray)	lsiwcgB106
Lsi11G003670	Watermelon (Charleston Gray)	lsiwcgB109
Lsi11G003670	Watermelon (97103) v1	lsiwmB098
Lsi11G003670	Watermelon (97103) v1	lsiwmB123
Lsi11G003670	Cucumber (Gy14) v2	cgyblsiB011
Lsi11G003670	Melon (DHL92) v3.6.1	lsimedB107
Lsi11G003670	Silver-seed gourd	carlsiB573
Lsi11G003670	Cucumber (Chinese Long) v3	cuclsiB012
Lsi11G003670	Watermelon (97103) v2	lsiwmbB097
Lsi11G003670	Wax gourd	lsiwgoB142