Carg10939 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10939
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF1068 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_034 : 1048780 .. 1052914 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGCCGATCTGGGTCTTGCCTGAGGTGTTGTCTCGTGATTTTCGCCGTAGTTTCTGCTTTGGCTGTTTGTGGGCCGGCCTTGTATTGGCGATTCAAGAAGGCTTTGCTATTGGGAGATTCCAAAACCTCCTGTGCTCCTTGCATCTGCGATTGTCCGCCCCCCTTATCCCTTCTGAAGATTGCTCCTGGTATTGTTTCTAATCTTCGTTTTCAGTTCCAGCAAATGCAAACGATTTCTCTTGTGGGTTGCTTTAGATTTCTGTTTTTGAACACTTAGTTGTGAAATTTAGTGAGAATCATAAATACCCATTTGGGCATTTGAAGGATTTTGGTTGTTTGATAGATATGTTTCCATTGATGGTTTGGATTCTGAGCTGTTTCTTTCTTTGATTGTGTGTTGTTGTATATGGCTGTGGCAAACTTGACCCATCTTAGATTTAGATTTGTACTCCTTTTTGTTACCTACTGCTGGGCTTAATGTTGAGTATTGTTGAGAGAGGAGTCCCACATCGGCTAATTAGGGAGTTGATCACGAGTTTATAAGTAAGGAGTACATCTCCATTGGTATGAGGCCTTTTGGGGAAACCAAAATCAAAGTCATGAGAGCTGATGCTCGAAGTGGACAATATCACATCATTGGGGAGGTTCGTGATTCCTAACATGGTATTAGAGTCATGCCCTTTAACTTAGCTATGTCAATGAAGTCCTCAAATGTTGAATAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATGGTGTATTTTGTTTGAGTGCTCTAGAAAAGGAGTCGAGTCTCGATTAAGGGGAGGCTGTTTGATGGCTCCATAGGACTCAGAGGAGACTCTATGGTGTACTTTGTTAGAGGGGAGGATTGTTGAAGATTGTTGGGAGAGGAGTCCCACATCGGCTAATTAGGGGGTTGATCACGAGTTTATAAGTAAGGAGTACATCTCCATTGGTATGAGGCCTTTTGGGGAAACCAAAATCAAAGTCATGAGAGCTGATGCTCGAAGTGGACAATATCATACTATTGTGGAGGTTTGTGATTCCTAACACTTAATGGAGCTAGATTATGCCCGATCTCAACTTAGAATCTTGGTTTTGTTGGGAAACTTTCAAGAATTTGTGCTTTTCTTCACCGGTGCCTTTCATAGTAACACTACTAATATTCGGACTTCCTGAATTTTTTCTTTGTGGTTTTTAACTCGAGTATCTTAAGTGGCAGTCGATCTGAAATTATGAACTTGAGGATTGTTGGGAGAGGAGTCCCACATCAGCTAATGAAGGGGTTGATCATGAGTTTATAAGTAAGAAACATTATCTCTATTGGTATGAGGTCTTTTGGGGAAACCAAAAGTAAAGCCACGAGAGTTTATGCTCAAAGTGGACAATATCATACCGTTGTGGAGATTCATGATTCCAAACATCTATTTCCACTTGTTATTTGCTTCAATTCTACATGGGCTAAAACTTGTTATCATTTAATGAAATGGTAATGCTGCCCCGTCAAGCAACTTGATGATCTTTGCATCAATACCCTTCCCTTGTGCTATAGCCAACATCAGTCAATACCACCGGAAAAATTCTCATTCACACCCACGGTCTCAACCAATCTGTTGGGCAACGCTCATAAGGAGTTCTATTGAAACCAAGAAATATAGGCCTGCCTGCCATCCACACTAGAATAAATGAAGTTTTCCCAAAAAAACTTGTTAGTAGATTCCCAATACATCTATTCAATTAAGCGAATCTTGTTTGGTATGGATAAGCAAGCATGGGTAGGCTCCTCGAGTGACCCAATTCAGGCAGATAGAAACCGCCGGTTGGGTTGGTCCAACCAAGAAAGACATGGGAGTGGGCATTGCTTAGGCCGAGTTAAGTAAAGATTGACTACCTAGTAATTTGTAACCACCCCTCACTGCGCACTTTCAATATATCTTTCTCCTCCCCCATTTTTCTTACCACTAATTGCTGCATGCTATCGGATCTCGAGAACCTCTTCAGTTATTTGGTCCAAGTTCGTTAAGGGTCTTGTTGGCGCACGAGCCGGTCGTGAAGTTTCTGTGTTGAGTATTAGGGTGGGGCTTGATACCATAGCATGGATGTAAAAATAGTATATAGAGCGCATATAAATTGCTCAAACATTCTTTACCAAATGCAGAGGCTTTTTAAATAAATTGATGTCCTCCTCTCTTAGATGAACTACATTTGATTTCATGTATAGTAGACTTGATTTGTGTTCTTACCAGATTCACTGTTACTTCCTCACTGACACTGTCTTTTTTGTTCTTGATAATTCTTTTGTAGGTCTGTCCAATCTCTCTGTCACAGGTTAGAATTCATCCCTCCAAATCAACTTGGCAATGAACAAAATCATGATTCTTTACTTGTTTTGGTAGCATTTTGAAAGCCTATTATGGTTTACTGAACTAAACTTATTTGTGCGCTCTATTTTTCTGGAGAAATACATGCAACTTTCATCATATTTCTCTTCCATCATTCATTTCCATGACATATGATATTGTTTAAGGTTATGTTTGCTTCCGATCCGATATTTTCTTGTTCTGCTTTGTTCTACGATGGATCGAAACTCTTAAAAAAATTCTGCATTCTGCACTTCATTGAAGGGATTCTGCCAACCGTTTTCTTCTAGTTCTTGATTTTCTTTGATATAACGTGTGCACGGCCAGTAATTATCATGTGTGAGATCCCACATCGATTGGAGAGGGGAATGGATCATTCTTTATAAGGGTATCATAGCCAGTCATTGGGCGGTGTGCCAGTGAGGACGCTGGGCCCCAAGGAGGGTGGATTATGAGATCTCATATCGGTTAGAGAGGAGAACGAAACATTCCTTATGAGGGTGTCTGAGTCAGTTACCGGGCGGTGTGTCAGTGAGGATGTTGGGCCCCTAAAGGGGTGGATTGTGAAATCCAACATCAATTGGAGAGGGAAACGAAACATTCCTTATAAGGGTGTCAAAGCCAGTCACCGTGTGGTATGTCAGCAAGAACGCTAGCCCCCAAAGGGGTGGACTGTGAGATCCCACATTGGTTGGAGAGGGGAACAAATCATTCCTTATAAGGGTGTCAGAGCCAGTCTCCGGACGGTGTGCCAGCGAGGACCCTAGGCCCCATGGAGGTGGATTTTGAGATCCCACATCGGTTGGAGAGGGAAACGAATCATTCCTTATAAGGGTGTCAGAGGCAGTCACCGGGCGGCATGCTAGTGAGGATGTTGGGCCCCTAAGGGGGTGGATTGTGAGATCCCACATGGTTTGACAAGGAAACGAAACATTCCTTATAAGGGTGTCAAAGCCAGTCACCGGGGGCGGTGTGCTAGCGAGGACGCAGGTCCCCAAAATGAGATTGATTGTGAGATCCCACATTGGTTGGAGAGAGAAACAAAACATTTCTTATGAAGGTGTGGAAACCTCTCCCTAGTAGACGCATTTTAAAATTGTGAGACTAACGGTGATACGTAACGGGCTAAAACAAATAATATTTGCTAGCGGTGGGCTGAGCTGTTACATCATACGTCTTAATATCTTTCTTCCAATATTTTTTTTGAGTCCACAGACGACTCAACTCTCGTTCCCCCGTCTTCTACCTTGATTATATGGGGTGTGTTTTCTTCACTTCTTGATTTGGAAGTTTTAGCTACATATTTCTTGATTTGAAAGTTTGAAACTTCTATATGAAAGTATTGGGAGATTTCAGCTACTTATTTATACTCTTTCACATTATCTGCTTTATATATTCTTTGACATTCTTCAATGCACATGCTCACTTCTTTATACATTAAAGACTGTGGGAGTAACGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGATCTTTTAACAGAGGAATTGAAGCTTCAAGAAGCCGTTTCTGGCGAACATACTCGCCATATGAACATCACGTTATTCGAGGCGAAAAGGGTAGCTTCTCAGTATCAGAGGGAGGCTGAAAAGTGCATTGCTGCAACCGAAACTTGTGAAGAGGCCCGAGAACGCGCCGAGGCTTTGACGATCAAGGAAAGGAAGCTTACGTTGTTGTGGGAGCGACGAGCTCACCAAATGGGTTGGGTCGAGAAATAA

mRNA sequence

ATGTCACGCCGATCTGGGTCTTGCCTGAGGTGTTGTCTCGTGATTTTCGCCGTAGTTTCTGCTTTGGCTGTTTGTGGGCCGGCCTTGTATTGGCGATTCAAGAAGGCTTTGCTATTGGGAGATTCCAAAACCTCCTGTGCTCCTTGCATCTGCGATTGTCCGCCCCCCTTATCCCTTCTGAAGATTGCTCCTGGTCTGTCCAATCTCTCTGTCACAGACTGTGGGAGTAACGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGATCTTTTAACAGAGGAATTGAAGCTTCAAGAAGCCGTTTCTGGCGAACATACTCGCCATATGAACATCACGTTATTCGAGGCGAAAAGGGTAGCTTCTCAGTATCAGAGGGAGGCTGAAAAGTGCATTGCTGCAACCGAAACTTGTGAAGAGGCCCGAGAACGCGCCGAGGCTTTGACGATCAAGGAAAGGAAGCTTACGTTGTTGTGGGAGCGACGAGCTCACCAAATGGGTTGGGTCGAGAAATAA

Coding sequence (CDS)

ATGTCACGCCGATCTGGGTCTTGCCTGAGGTGTTGTCTCGTGATTTTCGCCGTAGTTTCTGCTTTGGCTGTTTGTGGGCCGGCCTTGTATTGGCGATTCAAGAAGGCTTTGCTATTGGGAGATTCCAAAACCTCCTGTGCTCCTTGCATCTGCGATTGTCCGCCCCCCTTATCCCTTCTGAAGATTGCTCCTGGTCTGTCCAATCTCTCTGTCACAGACTGTGGGAGTAACGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGATCTTTTAACAGAGGAATTGAAGCTTCAAGAAGCCGTTTCTGGCGAACATACTCGCCATATGAACATCACGTTATTCGAGGCGAAAAGGGTAGCTTCTCAGTATCAGAGGGAGGCTGAAAAGTGCATTGCTGCAACCGAAACTTGTGAAGAGGCCCGAGAACGCGCCGAGGCTTTGACGATCAAGGAAAGGAAGCTTACGTTGTTGTGGGAGCGACGAGCTCACCAAATGGGTTGGGTCGAGAAATAA

Protein sequence

MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLLKIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKRVASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWVEK

Homology

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BLAST of Carg10939 vs. NCBI nr
Match: XP_022946160.1 (uncharacterized protein LOC111450322 [Cucurbita moschata] >XP_022999305.1 uncharacterized protein LOC111493720 [Cucurbita maxima])

HSP 1 Score: 343.6 bits (880), Expect = 3.9e-91
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL
Sbjct: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWVEK 173
           VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWVEK
Sbjct: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWVEK 172

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BLAST of Carg10939 vs. NCBI nr
Match: XP_023547119.1 (uncharacterized protein LOC111806024 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 4.1e-88
Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL
Sbjct: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWV 171
           VASQYQREAEKCIAATETCEEARERAEALTIKERKLT LWERRA QMGW+
Sbjct: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTSLWERRARQMGWM 170

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BLAST of Carg10939 vs. NCBI nr
Match: XP_008457359.1 (PREDICTED: uncharacterized protein LOC103497063 [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 2.3e-83
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+CLRCCLV FAVVSALAVCGPALYWRFKKAL LGDSK SC PCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KI+PGL+NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KISPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
            ASQYQREAEKCIAATETCEEARERAEAL IKERKLT LWERRA QMGW
Sbjct: 121 AASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 169

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BLAST of Carg10939 vs. NCBI nr
Match: XP_004139277.1 (PREDICTED: uncharacterized protein LOC101212944 [Cucumis sativus] >KGN60733.1 hypothetical protein Csa_2G008730 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 5.1e-83
Identity = 157/169 (92.90%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+CLRCCLV FAVVSALAVCGPALYWRFKKAL LGDSK SC PCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KI+PGL+NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KISPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
            ASQYQREAEKCIAATETCEEARERAEAL IKERK+T LWERRA QMGW
Sbjct: 121 AASQYQREAEKCIAATETCEEARERAEALMIKERKVTSLWERRARQMGW 169

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BLAST of Carg10939 vs. NCBI nr
Match: XP_022143173.1 (uncharacterized protein LOC111013108 [Momordica charantia])

HSP 1 Score: 316.6 bits (810), Expect = 5.1e-83
Identity = 158/169 (93.49%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+CLRCCLVIFAVVSALAVCGPALYWRFKKA  LGDSK SC PCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVIFAVVSALAVCGPALYWRFKKAFQLGDSKISCPPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KIAPGL+NLSVTDCGSNDPDLK EMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KIAPGLANLSVTDCGSNDPDLKHEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
            ASQYQREAEKCIAATETCEEARERAEAL IKERKLT LWERRA QMGW
Sbjct: 121 AASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 169

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BLAST of Carg10939 vs. TAIR10
Match: AT4G30996.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 261.2 bits (666), Expect = 4.6e-70
Identity = 131/170 (77.06%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTS-CAPCICDCPPPLSL 60
           M RRSG C+R CLVIFAVVSAL VCGPALYW+F K  +      S C PC+CDCPPPLSL
Sbjct: 1   MPRRSGDCMR-CLVIFAVVSALVVCGPALYWKFNKGFVGSTRANSLCPPCVCDCPPPLSL 60

Query: 61  LKIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAK 120
           L+IAPGL+NLS+TDCGS+DP+LKQEMEKQFVDLLTEELKLQEAV+ EH+RHMN+TL EAK
Sbjct: 61  LQIAPGLANLSITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAK 120

Query: 121 RVASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
           RVASQYQ+EAEKC AATE CE ARERAEAL IKERK+T LWE+RA Q GW
Sbjct: 121 RVASQYQKEAEKCNAATEICESARERAEALLIKERKITSLWEKRARQSGW 169

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BLAST of Carg10939 vs. TAIR10
Match: AT2G24290.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-66
Identity = 124/171 (72.51%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTS--CAPCICDCPPPLS 60
           M+RRSG+C+R CLVIF+VVSAL VCGPALYW+  K  +     T+  C PC+CD PPPLS
Sbjct: 1   MARRSGNCMR-CLVIFSVVSALLVCGPALYWKLNKGFVGSARSTNSICPPCVCDFPPPLS 60

Query: 61  LLKIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEA 120
           LL+IAPGL+NLS+T CGS+DP+LK+EMEK FVDLLTEELKLQEAV+ EH+RHMN+TL EA
Sbjct: 61  LLQIAPGLANLSITGCGSDDPELKEEMEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEA 120

Query: 121 KRVASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
           KRVASQYQ+EAEKC AATE CE ARERA+AL +KERK+T LWERRA Q+GW
Sbjct: 121 KRVASQYQKEAEKCNAATEICESARERAQALLLKERKITFLWERRARQLGW 170

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BLAST of Carg10939 vs. TAIR10
Match: AT4G04360.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 122.1 bits (305), Expect = 3.4e-28
Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDS-KTSCAPCICDCPPPLSL 60
           M+RR     +   V+  +     + GP+LYW   +   + DS  +SC PC+CDC     L
Sbjct: 1   MTRRQKKTAKVVTVVMGLCIVAYIAGPSLYWHLNET--IADSLHSSCPPCVCDCSSQ-PL 60

Query: 61  LKIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAK 120
           L I  GLSN S  DC  ++ +  +E E  F +++ EELKL+EA + E     +  L +AK
Sbjct: 61  LSIPDGLSNHSFLDCMRHE-EGSEESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAK 120

Query: 121 RVASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWVE 172
           + ASQYQ+EA+KC    ETCE ARE+AEA   ++R+L+ +WE RA Q GW E
Sbjct: 121 KAASQYQKEADKCSMGMETCELAREKAEAALDEQRRLSYMWELRARQGGWKE 168

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BLAST of Carg10939 vs. TAIR10
Match: AT2G32580.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 117.5 bits (293), Expect = 8.3e-27
Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 7   SCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLLKIAPGL 66
           + L+  L + A+     + GP LYW   +AL +  S TSC+ C+CDC   L LL I  GL
Sbjct: 6   AALKVGLALLALSMIGYILGPPLYWHLTEALAV--SATSCSACVCDC-SSLPLLTIPTGL 65

Query: 67  SNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKRVASQYQ 126
           SN S TDC   DP++ ++ EK + +LLTEELK +EA S E  + ++  L EAK++ S YQ
Sbjct: 66  SNGSFTDCAKRDPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQ 125

Query: 127 REAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
           +EA+KC +  ETCEEAR                 E+RA Q G+
Sbjct: 126 KEADKCNSGMETCEEARXXXXXXXXXXXXXXXXXEQRARQKGY 165

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BLAST of Carg10939 vs. TAIR10
Match: AT1G05070.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-22
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 4   RSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLLKIA 63
           R  + L+  L +  +  A  + GP LYW   +A L   S +SC  C C+C    S + I 
Sbjct: 3   RHTAALKIGLALLGLSMAGYILGPPLYWHLTEA-LAAVSASSCPSCPCEC-STYSAVTIP 62

Query: 64  PGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKRVAS 123
             LSN S  DC  +DP++ ++ EK + +LLTEELKL+EA S E  +  ++ L EAK+V S
Sbjct: 63  KELSNASFADCAKHDPEVNEDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTS 122

Query: 124 QYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGWVE 172
            YQ+EA+KC +  ETCEEA                       Q GW E
Sbjct: 123 SYQKEADKCNSGMETCEEAXXXXXXXXXXXXXXXXXXXXXXRQKGWRE 168

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BLAST of Carg10939 vs. TrEMBL
Match: tr|A0A1S3C6L6|A0A1S3C6L6_CUCME (uncharacterized protein LOC103497063 OS=Cucumis melo OX=3656 GN=LOC103497063 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-83
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+CLRCCLV FAVVSALAVCGPALYWRFKKAL LGDSK SC PCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KI+PGL+NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KISPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
            ASQYQREAEKCIAATETCEEARERAEAL IKERKLT LWERRA QMGW
Sbjct: 121 AASQYQREAEKCIAATETCEEARERAEALMIKERKLTSLWERRARQMGW 169

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BLAST of Carg10939 vs. TrEMBL
Match: tr|A0A0A0LG38|A0A0A0LG38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008730 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.4e-83
Identity = 157/169 (92.90%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+CLRCCLV FAVVSALAVCGPALYWRFKKAL LGDSK SC PCICDCPPPLSLL
Sbjct: 1   MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KI+PGL+NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR
Sbjct: 61  KISPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
            ASQYQREAEKCIAATETCEEARERAEAL IKERK+T LWERRA QMGW
Sbjct: 121 AASQYQREAEKCIAATETCEEARERAEALMIKERKVTSLWERRARQMGW 169

[Close]

BLAST of Carg10939 vs. TrEMBL
Match: tr|M5VR86|M5VR86_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G259500 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.3e-78
Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRS +CLRCCLV+FAVVSAL VCGPALYWRFKK++ LGDSKTSC  C CDCPPPLSLL
Sbjct: 1   MSRRSATCLRCCLVVFAVVSALGVCGPALYWRFKKSIRLGDSKTSCPTCNCDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KIAPGL+NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAV+ EHTRHMNIT  EAKR
Sbjct: 61  KIAPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVAAEHTRHMNITFAEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
           VASQYQ+EAEKC AATETCEEARERA+AL IKERK+TLLWERRA QMGW
Sbjct: 121 VASQYQKEAEKCNAATETCEEARERAQALFIKERKVTLLWERRARQMGW 169

[Close]

BLAST of Carg10939 vs. TrEMBL
Match: tr|A0A1R3KXD9|A0A1R3KXD9_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00298 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.6e-78
Identity = 150/169 (88.76%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+CLR CLVIFAVVSAL VCGPALYWRFKK L LGDSK+SC PCICDCPPPLSLL
Sbjct: 1   MSRRSGTCLRLCLVIFAVVSALGVCGPALYWRFKKTLRLGDSKSSCPPCICDCPPPLSLL 60

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KIAPGL+NLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVS EH RHMNIT  EAKR
Sbjct: 61  KIAPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSAEHARHMNITFGEAKR 120

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
           VASQYQREAEKCIAATETCE ARE+AEA  IKERKLT LWE+RA QMGW
Sbjct: 121 VASQYQREAEKCIAATETCEGAREQAEAFLIKERKLTTLWEQRARQMGW 169

[Close]

BLAST of Carg10939 vs. TrEMBL
Match: tr|A0A2H5PWQ0|A0A2H5PWQ0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_174330 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 8.1e-77
Identity = 146/169 (86.39%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MSRRSGSCLRCCLVIFAVVSALAVCGPALYWRFKKALLLGDSKTSCAPCICDCPPPLSLL 60
           MSRRSG+C+RCCLVIFAVVSALAVCGPAL+WRFKK + LGD+K+SC PC CDCPPPLSLL
Sbjct: 4   MSRRSGNCVRCCLVIFAVVSALAVCGPALFWRFKKGVSLGDNKSSCPPCNCDCPPPLSLL 63

Query: 61  KIAPGLSNLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKR 120
           KIAPGL+NLSVTDCGSNDPD+KQEMEKQFVDLLTEELKLQEAV+ EH RHMNIT  EAKR
Sbjct: 64  KIAPGLANLSVTDCGSNDPDVKQEMEKQFVDLLTEELKLQEAVAEEHLRHMNITFGEAKR 123

Query: 121 VASQYQREAEKCIAATETCEEARERAEALTIKERKLTLLWERRAHQMGW 170
           VASQYQ+EAEKC AATETCEEARERAEAL IKERK+T LWERRA QMGW
Sbjct: 124 VASQYQKEAEKCNAATETCEEARERAEALLIKERKVTSLWERRAQQMGW 172

The following BLAST results are available for this feature:

BLAST of Carg10939 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946160.1	3.9e-91	100.00	uncharacterized protein LOC111450322 [Cucurbita moschata] >XP_022999305.1 unchar...	[more]
XP_023547119.1	4.1e-88	98.24	uncharacterized protein LOC111806024 [Cucurbita pepo subsp. pepo]	[more]
XP_008457359.1	2.3e-83	93.49	PREDICTED: uncharacterized protein LOC103497063 [Cucumis melo]	[more]
XP_004139277.1	5.1e-83	92.90	PREDICTED: uncharacterized protein LOC101212944 [Cucumis sativus] >KGN60733.1 hy...	[more]
XP_022143173.1	5.1e-83	93.49	uncharacterized protein LOC111013108 [Momordica charantia]	[more]

BLAST of Carg10939 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30996.1	4.6e-70	77.06	Protein of unknown function (DUF1068)	[more]
AT2G24290.1	1.4e-66	72.51	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	3.4e-28	41.28	Protein of unknown function (DUF1068)	[more]
AT2G32580.1	8.3e-27	41.72	Protein of unknown function (DUF1068)	[more]
AT1G05070.1	3.6e-22	37.50	Protein of unknown function (DUF1068)	[more]

BLAST of Carg10939 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg10939 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6L6\|A0A1S3C6L6_CUCME	1.5e-83	93.49	uncharacterized protein LOC103497063 OS=Cucumis melo OX=3656 GN=LOC103497063 PE=...	[more]
tr\|A0A0A0LG38\|A0A0A0LG38_CUCSA	3.4e-83	92.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008730 PE=4 SV=1	[more]
tr\|M5VR86\|M5VR86_PRUPE	4.3e-78	87.57	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G259500 PE=4 SV=1	[more]
tr\|A0A1R3KXD9\|A0A1R3KXD9_COCAP	5.6e-78	88.76	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00298 PE=4 ...	[more]
tr\|A0A2H5PWQ0\|A0A2H5PWQ0_CITUN	8.1e-77	86.39	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_174330 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10939-RA	Carg10939-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 1..171
None	No IPR available	PANTHER	PTHR32254:SF4	EXPRESSED PROTEIN	coord: 1..171
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 7..171 e-value: 2.3E-72 score: 242.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10939	Cla016660	Watermelon (97103) v1	carwmB0569
Carg10939	Csa2G008730	Cucumber (Chinese Long) v2	carcuB0598
Carg10939	MELO3C004488	Melon (DHL92) v3.5.1	carmeB0575
Carg10939	ClCG11G003550	Watermelon (Charleston Gray)	carwcgB0553
Carg10939	CSPI02G02220	Wild cucumber (PI 183967)	carcpiB0603
Carg10939	Cucsa.132580	Cucumber (Gy14) v1	carcgyB0645
Carg10939	CmaCh05G012530	Cucurbita maxima (Rimu)	carcmaB0802
Carg10939	CmaCh12G011740	Cucurbita maxima (Rimu)	carcmaB0797
Carg10939	CmoCh05G012850	Cucurbita moschata (Rifu)	carcmoB0779
Carg10939	CmoCh12G011980	Cucurbita moschata (Rifu)	carcmoB0776
Carg10939	Lsi11G003670	Bottle gourd (USVL1VR-Ls)	carlsiB514
Carg10939	Cp4.1LG11g10350	Cucurbita pepo (Zucchini)	carcpeB0809
Carg10939	Cp4.1LG07g11150	Cucurbita pepo (Zucchini)	carcpeB0815
Carg10939	CsGy2G002320	Cucumber (Gy14) v2	carcgybB0573
Carg10939	MELO3C004488.2	Melon (DHL92) v3.6.1	carmedB0582
Carg10939	CsaV3_2G003420	Cucumber (Chinese Long) v3	carcucB0605
Carg10939	Cla97C11G210070	Watermelon (97103) v2	carwmbB0591
Carg10939	Bhi06G001587	Wax gourd	carwgoB0678

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10939	Carg17469	Silver-seed gourd	carcarB296

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10939	Melon (DHL92) v3.6.1	carmedB0584