Lsi11G002040 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G002040
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionZinc finger CCCH domain-containing protein 49
Locationchr11 : 2077559 .. 2078737 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTCGGCGAGCAGCCCAAACGCCCGAATCCGACCGTTCAGGTTCCACCGTGGACGTTTATGGAGGATTCGGCGATCGATGTGTACAGTCATTCGCCGGGGAGCGGTGGCAGCAGCGGTTCCGTTAAGTGCGATGGATGTTCCAGCGGAGGCGGATACTCTCCTTATTATCTGCAGGAAGCATTGGCGATGCTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATTTTGATGTTTCAGGTCGGGAGTTGGATTCTCCGGTGGATGCGTACTCTTCCGATCAGTTTCGAATGTATGAGTTCAAGATTAAGAAGTGCACGAGAGGAAGATCGCACGACTGGACTGAGTGTCCGTTTGCTCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAGGTATTACTATTCAGGTACGGCGTGTGCGGATTTTCGGAAAGGGAGCTGTATGAAAGGAGATGCGTGTGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGCTATCGGACTCAGCCATGCAAGGATGGCACGAGTTGCCGGAGAAGAGTTTGTTTCTTCGCTCATACGCCGGATCAACTTAGGGTTTTGCCTCAACAAAGCCCTCGGAGTACGAGTTCCATCCCTTCGTACGACGGATCGCCTCTCCGACAAGCAATTGAGGCATGTGCAAAGCAAATACCCTATCTATCTTCTCCAGGAACATCGCCGCCAGTATCTCCTCGAATCGAGTCTCCACCTCAATCGCCGATGATTAAGTCACTAAATCGACCTCACGGAACAAGTTCGATCAACGAAATGGTTGCATCACTGCGAAGTTTACAGCTCAATAAGGAACTCTGTAAGGTACAATCTCCTTCTTCCTCGTGGAATGTTCAAGTCGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCGCTCGATCCGGTTTATGTAGCCTTCCAGATACTCCGACTCGTCCAGTTAGCCGATATCTCGATTTCTGGGACCTAGGCTGCGGAGAGGAACCGGCAATGGAGCGAGTGGAGTCCGGAAGAGATCTTCGTGCAAAAATGTTTGAGAAATTGAGGAAGGAGAACTCCGTCGGCTGCGGCGATCAGGACAAATACAGCGGCAACGGAGGTCTGGATGTCGGTTGGATCTCGGAGCTCCTCAAGTAA

mRNA sequence

ATGATCGTCGGCGAGCAGCCCAAACGCCCGAATCCGACCGTTCAGGTTCCACCGTGGACGTTTATGGAGGATTCGGCGATCGATGTGTACAGTCATTCGCCGGGGAGCGGTGGCAGCAGCGGTTCCGTTAAGTGCGATGGATGTTCCAGCGGAGGCGGATACTCTCCTTATTATCTGCAGGAAGCATTGGCGATGCTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATTTTGATGTTTCAGGTCGGGAGTTGGATTCTCCGGTGGATGCGTACTCTTCCGATCAGTTTCGAATGTATGAGTTCAAGATTAAGAAGTGCACGAGAGGAAGATCGCACGACTGGACTGAGTGTCCGTTTGCTCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAGGTATTACTATTCAGGTACGGCGTGTGCGGATTTTCGGAAAGGGAGCTGTATGAAAGGAGATGCGTGTGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGCTATCGGACTCAGCCATGCAAGGATGGCACGAGTTGCCGGAGAAGAGTTTGTTTCTTCGCTCATACGCCGGATCAACTTAGGGTTTTGCCTCAACAAAGCCCTCGGAGTACGAGTTCCATCCCTTCGTACGACGGATCGCCTCTCCGACAAGCAATTGAGGCATGTGCAAAGCAAATACCCTATCTATCTTCTCCAGGAACATCGCCGCCAGTATCTCCTCGAATCGAGTCTCCACCTCAATCGCCGATGATTAAGTCACTAAATCGACCTCACGGAACAAGTTCGATCAACGAAATGGTTGCATCACTGCGAAGTTTACAGCTCAATAAGGAACTCTGTAAGGTACAATCTCCTTCTTCCTCGTGGAATGTTCAAGTCGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCGCTCGATCCGGTTTATGTAGCCTTCCAGATACTCCGACTCGTCCAGTTAGCCGATATCTCGATTTCTGGGACCTAGGCTGCGGAGAGGAACCGGCAATGGAGCGAGTGGAGTCCGGAAGAGATCTTCGTGCAAAAATGTTTGAGAAATTGAGGAAGGAGAACTCCGTCGGCTGCGGCGATCAGGACAAATACAGCGGCAACGGAGGTCTGGATGTCGGTTGGATCTCGGAGCTCCTCAAGTAA

Coding sequence (CDS)

ATGATCGTCGGCGAGCAGCCCAAACGCCCGAATCCGACCGTTCAGGTTCCACCGTGGACGTTTATGGAGGATTCGGCGATCGATGTGTACAGTCATTCGCCGGGGAGCGGTGGCAGCAGCGGTTCCGTTAAGTGCGATGGATGTTCCAGCGGAGGCGGATACTCTCCTTATTATCTGCAGGAAGCATTGGCGATGCTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATTTTGATGTTTCAGGTCGGGAGTTGGATTCTCCGGTGGATGCGTACTCTTCCGATCAGTTTCGAATGTATGAGTTCAAGATTAAGAAGTGCACGAGAGGAAGATCGCACGACTGGACTGAGTGTCCGTTTGCTCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAGGTATTACTATTCAGGTACGGCGTGTGCGGATTTTCGGAAAGGGAGCTGTATGAAAGGAGATGCGTGTGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGCTATCGGACTCAGCCATGCAAGGATGGCACGAGTTGCCGGAGAAGAGTTTGTTTCTTCGCTCATACGCCGGATCAACTTAGGGTTTTGCCTCAACAAAGCCCTCGGAGTACGAGTTCCATCCCTTCGTACGACGGATCGCCTCTCCGACAAGCAATTGAGGCATGTGCAAAGCAAATACCCTATCTATCTTCTCCAGGAACATCGCCGCCAGTATCTCCTCGAATCGAGTCTCCACCTCAATCGCCGATGATTAAGTCACTAAATCGACCTCACGGAACAAGTTCGATCAACGAAATGGTTGCATCACTGCGAAGTTTACAGCTCAATAAGGAACTCTGTAAGGTACAATCTCCTTCTTCCTCGTGGAATGTTCAAGTCGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCGCTCGATCCGGTTTATGTAGCCTTCCAGATACTCCGACTCGTCCAGTTAGCCGATATCTCGATTTCTGGGACCTAGGCTGCGGAGAGGAACCGGCAATGGAGCGAGTGGAGTCCGGAAGAGATCTTCGTGCAAAAATGTTTGAGAAATTGAGGAAGGAGAACTCCGTCGGCTGCGGCGATCAGGACAAATACAGCGGCAACGGAGGTCTGGATGTCGGTTGGATCTCGGAGCTCCTCAAGTAA

Protein sequence

MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQIPYLSSPGTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQVGSPVFGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK
Homology
[Close]
BLAST of Lsi11G002040 vs. Swiss-Prot
Match: C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.4e-109
Identity = 213/396 (53.79%), Postives = 266/396 (67.17%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +  NPTV +PPW   ED  +     SP  G S                   + 
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSPDGGSS-------------------MM 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + DSD D+SG   DSP+DAY+ D FRMYEFK+++C RGRSHDWTE
Sbjct: 61  EALAELQRYLPSNEPDPDSDPDLSGP--DSPIDAYTCDHFRMYEFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC +FRKG C +GDACEF+HGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYD--GSPLRQAIEACAKQIPYLSS 240
           KDG +CRRRVCFFAH+PDQ+RVLP QSP     + S+D     +R+A +        +S 
Sbjct: 181 KDGGNCRRRVCFFAHSPDQIRVLPNQSP---DRVDSFDVLSPTIRRAFQFS------ISP 240

Query: 241 PGTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNV 300
              SPPVSPR +S     +   L+R  G++  N++VASLR+LQLNK      S SSS+N 
Sbjct: 241 SSNSPPVSPRGDSDSSCSL---LSRSLGSNLGNDVVASLRNLQLNK---VKSSLSSSYNN 300

Query: 301 QVG--SPVFGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMERVESGRDLRA 360
           Q+G     FGSP+ S    G  SLP TPTRP   +++ W+ G  EEPAMERVESGR+LRA
Sbjct: 301 QIGGYGSGFGSPRGSVLGPGFRSLPTTPTRP--GFMNIWENGLEEEPAMERVESGRELRA 358

Query: 361 KMFEKLRKENSVGCGDQDKYSGNGGL-DVGWISELL 392
           ++FEKL KEN +G  + D   G G   DVGW+S+L+
Sbjct: 361 QLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]
BLAST of Lsi11G002040 vs. Swiss-Prot
Match: C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 5.4e-100
Identity = 209/400 (52.25%), Postives = 261/400 (65.25%), Query Frame = 1 

Query: 16  VPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEA 75
           VPPW+ +  S +DV     G GG  G             +PY     +A L+ YLP+N+ 
Sbjct: 11  VPPWSHLPVSGVDVL----GGGGGGGDEM----------TPY----VIAALRDYLPANDV 70

Query: 76  EMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDP 135
            + +D +     + + VDAY+ D+FRMYEFK+++C RGRSHDWTECPFAHPGEKARRRDP
Sbjct: 71  GVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDP 130

Query: 136 RRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAH 195
           R+Y+YSGTAC DFRKG C +GDACE+AHGVFECWLHPARYRTQPCKDGT+CRRRVCFFAH
Sbjct: 131 RKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAH 190

Query: 196 TPDQLRVLP--QQSPRSTSSIP---SYDGSPL-RQAIEACAKQIPYLSSPGT---SPPVS 255
           TPDQLRVLP  Q SPRS +S P   SYDGSPL RQA E+   +    SSP +   SPP S
Sbjct: 191 TPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKS 250

Query: 256 PRIESPPQSP----MIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQVGS 315
           P  ESPP SP     I+  + P   S +N+++AS R L+LNK      SPS  W+    S
Sbjct: 251 PPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNK---VKSSPSGGWSYPSSS 310

Query: 316 PVFGSPKESTARSGLCSLPDTP---TRPVSRYLDFW------DLG-CGEEPAMERVESGR 375
            V+GSPK +T   GL SLP TP   T  V+    F       DLG  G+E  ++RVESGR
Sbjct: 311 AVYGSPKAAT---GLYSLPTTPLASTATVTTASSFMPNLEPLDLGLIGDEEPVQRVESGR 370

Query: 376 DLRAKMFEKLRKENSVGCGDQDKYSGNG-GLDVGWISELL 392
            LR K+FE+L ++ ++  GD   ++  G GLDV W+S+L+
Sbjct: 371 ALREKVFERLSRDGAIS-GDATAFATAGVGLDVDWVSDLI 385

[Close]
BLAST of Lsi11G002040 vs. Swiss-Prot
Match: C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-98
Identity = 207/396 (52.27%), Postives = 258/396 (65.15%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +R  PTV++PPW  +E+     +         S  +    CS         + 
Sbjct: 1   MMIGET-RRTYPTVEIPPWPVLEELTTSEFF--------SPVMNSPDCS---------ML 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + +S  D+ G   DSP+DAYS D FRMY+FK+++C RGRSHDWTE
Sbjct: 61  EALAGLQRYLPSNEPDPESYPDLLGP--DSPIDAYSCDHFRMYDFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYD-GSPLRQAIEACAKQIPYLSSP 240
           KDG +C R++CFFAH+PDQLR L  +SP     + S+D  SP+R    A A Q+  +S  
Sbjct: 181 KDGGNCLRKICFFAHSPDQLRFLHTRSP---DRVDSFDVSSPIR----ARAFQLS-ISPV 240

Query: 241 GTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQ 300
             SPP+SPR +S   SPM +SL+R  G+ SIN++V S R+LQ N          S  +  
Sbjct: 241 SGSPPMSPRADS-ESSPMTQSLSRSLGSCSINDVVPSFRNLQFN----------SVKSFP 300

Query: 301 VGSPV--FGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMER-VESGRDLRA 360
             +P+  FGSP+ S    G  SLP TPTRP +  LD W+ G  EEP MER VESGR+LR 
Sbjct: 301 RNNPLFGFGSPRGSILGPGFQSLPTTPTRPGN--LDIWEYGLEEEPVMERVVESGRELRE 355

Query: 361 KMFEKLRKENSVGCGDQDKYSGNG-GLDVGWISELL 392
           KM EKL KEN +    QD     G   DVGW+S+LL
Sbjct: 361 KMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]
BLAST of Lsi11G002040 vs. Swiss-Prot
Match: C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.3e-87
Identity = 202/412 (49.03%), Postives = 242/412 (58.74%), Query Frame = 1 

Query: 17  PPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAE 76
           PPW   +       S   G GG    V           +PY+L   L  L+ YLPSNEA 
Sbjct: 11  PPW---QQHVASPVSGVEGGGGRESEVVA---------APYHL---LDTLRHYLPSNEAA 70

Query: 77  MDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPR 136
              D +     + + VDAY+ D+FRMYEFK+++C RGRSHDWTECPFAHPGEKARRRDPR
Sbjct: 71  AAED-EEEAAAVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPR 130

Query: 137 RYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHT 196
           RY YSGTAC DFRKG C +GDACEFAHGVFECWLHPARYRTQPCKDGT+CRRRVCFFAHT
Sbjct: 131 RYCYSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHT 190

Query: 197 PDQLRVLPQQSPRSTSS----------------IPSYDGSPL-RQAIEACAKQIPYLSSP 256
           PDQLRVLP    + ++S                  SYDGSPL RQA E+   +    SSP
Sbjct: 191 PDQLRVLPPSQQQGSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESYLTKSIMSSSP 250

Query: 257 GT---SPPVSPRIESPPQSPMIKSLNRPHG----TSSINEMVASLRSLQLNKELCKVQSP 316
            +   SPP SP  ESPP SP      R        S +N++  SLR L+L        +P
Sbjct: 251 TSTLVSPPRSPPSESPPLSPDAAGALRRGAWAGVGSPVNDVHVSLRQLRLGSPR---SAP 310

Query: 317 SSSWNVQVGSPVFGSPKE--STARSGLCSLPDTPTR--PV--------SRYLDFWDLG-C 376
           S +  +  G   +GSPK   + A + L SLP TPTR  PV        +  ++  DLG  
Sbjct: 311 SCASFLPAGYQ-YGSPKSPAAAAAAALYSLPSTPTRLSPVTVTTASGATVTVEPLDLGLI 370

Query: 377 GEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELL 392
            EE  MERVESGR LR K+FE+L KE +V   D    +     DVGW+S+L+
Sbjct: 371 EEEQPMERVESGRALREKVFERLSKEATVST-DAAAAAAGVAPDVGWVSDLI 401

[Close]
BLAST of Lsi11G002040 vs. Swiss-Prot
Match: C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.2e-80
Identity = 174/372 (46.77%), Postives = 220/372 (59.14%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE   RP+PT+ +P W  + D    +   SP S  +  SV      +   +SP    
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATI--SSPFSSVNLNSV------NDYPHSPSPYL 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           ++ A L RYLPSNE   DSD   SG E     D++SSD+FR+YEFKI++C RGRSHDWTE
Sbjct: 61  DSFASLFRYLPSNELTNDSDSS-SGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPR+++YSGTAC +FRKGSC +GD+CEF+HGVFECWLHP+RYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQIPYLSSPG 240
           KDGTSCRRR+CFFAHT +QLRVLP               SP               +S  
Sbjct: 181 KDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------------TSIL 240

Query: 241 TSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQV 300
            SP  SP  ESPP SP            S  E++AS+R +QLN   C       SW+   
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIASMRKMQLNGGGC-------SWS--- 300

Query: 301 GSPVFGSPKESTARSGLCSLP-DTPTRPV--SRYLDFWDLGCGEEPAMERVESGRDLRAK 360
                 SP  S  R     LP  +  RP+  + +    +    E PAME VESG++LRA+
Sbjct: 301 ------SPMRSAVR-----LPFSSSLRPIQAATWPRIREFEIEEAPAMEFVESGKELRAE 315

Query: 361 MFEKLRKENSVG 370
           M+ +L +ENS+G
Sbjct: 361 MYARLSRENSLG 315

[Close]
BLAST of Lsi11G002040 vs. TrEMBL
Match: A0A067KPP4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07335 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 6.2e-143
Identity = 257/394 (65.23%), Postives = 301/394 (76.40%), Query Frame = 1 

Query: 5   EQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALA 64
           ++  RPN TV VPPW  +ED+  + Y  S  S  S  +      ++   Y+PYYLQEALA
Sbjct: 4   DERHRPNTTVHVPPWALIEDANPEGYLSSQLSPHSGNA------ATASDYNPYYLQEALA 63

Query: 65  MLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFA 124
            L+RYLPSNE + DSD +VSG E DSPVDA+S D FRM+EFK+++C RGRSHDWTECP+A
Sbjct: 64  ALQRYLPSNEPDFDSDSEVSGLEPDSPVDAFSCDHFRMFEFKVRRCARGRSHDWTECPYA 123

Query: 125 HPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPCKDGT 184
           HPGEKARRRDPR+Y+YSGTAC DFRKG+C KGDACEFAHGVFECWLHP RYRTQPCKDGT
Sbjct: 124 HPGEKARRRDPRKYHYSGTACPDFRKGNCKKGDACEFAHGVFECWLHPGRYRTQPCKDGT 183

Query: 185 SCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEA-CAKQIPYLSSPGT-S 244
           +CRRRVCFFAHTP+QLRVLPQQSPRS +S+ SYDGSP RQAIEA CAK +P+LSSPG+ S
Sbjct: 184 NCRRRVCFFAHTPEQLRVLPQQSPRSVNSVESYDGSPFRQAIEASCAKSLPFLSSPGSIS 243

Query: 245 PPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQVGS 304
           PP +P  +SPP SPM + L+R  G++SINEM+ASLR+LQL     KV+S  +SWNVQVG 
Sbjct: 244 PPATPPADSPPMSPMTQCLSRSVGSNSINEMMASLRNLQLG----KVKSLPASWNVQVGG 303

Query: 305 PVFGSPKESTARSGLCSLPDTPTRPVSR----YLDFWDLGCGEEPAMERVESGRDLRAKM 364
             +GSP+ S  RSG CSLP TPT   +R    Y D W+  C EEP MERVESGRDLR KM
Sbjct: 304 SGYGSPRGSNIRSGFCSLPTTPTSAPTRSGLCYRDVWERVCEEEPPMERVESGRDLRVKM 363

Query: 365 FEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           FEKL KENS+G  D D        DVGW+SELLK
Sbjct: 364 FEKLSKENSLGRVDPDPVQSANAPDVGWVSELLK 387

[Close]
BLAST of Lsi11G002040 vs. TrEMBL
Match: F6HGX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02790 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 9.2e-139
Identity = 258/396 (65.15%), Postives = 303/396 (76.52%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  + PNPTV VPPW   +D  +D+    P SG S  S        GG +SP+ L 
Sbjct: 1   MMIGES-RHPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLLG 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EAL  L+RYLPSN+ ++DSD D+SGRE D PVDAYS D FRM+EFK+++C RGRSHDWTE
Sbjct: 61  EALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC DFRKG+C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEA-CAKQIPYLSSP 240
           KDG +CRRRVCFFAHT +QLRVLPQQSPR+  S+ SYDGSPLRQA+EA CAK +P++SSP
Sbjct: 181 KDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSSP 240

Query: 241 GT-SPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNV 300
           G+ SPP SP  ESPP SP+  SL+R  G++SINEMVASLR LQL+    KV+S  SSW V
Sbjct: 241 GSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLS----KVKSAPSSWCV 300

Query: 301 QVGSP-VFGSPKESTARSGLCSLPDTPTRPVSRY-LDFWDLGCGEEPAMERVESGRDLRA 360
            +GSP  FGSP+ S  R G CSLP TPTR   R+ L F DL   EEPAMERVESGRDLRA
Sbjct: 301 HMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDL-FEEEPAMERVESGRDLRA 360

Query: 361 KMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           KMFEKL KENS+     D  +   G DVGW+SEL+K
Sbjct: 361 KMFEKLSKENSL--DRPDPSASGAGPDVGWVSELVK 388

[Close]
BLAST of Lsi11G002040 vs. TrEMBL
Match: A5C465_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013303 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.6e-138
Identity = 258/394 (65.48%), Postives = 302/394 (76.65%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +RPNPTV VPPW   +D  +D+    P SG S  S        GG +SP+ L 
Sbjct: 41  MMIGES-RRPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLLG 100

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EAL  L+RYLPSN+ ++DSD D+SGRE D PVDAYS D FRM+EFK+++C RGRSHDWTE
Sbjct: 101 EALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTE 160

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC DFRKG+C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 161 CPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPC 220

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEA-CAKQIPYLSSP 240
           KDG +CRRRVCFFAHT +QLRVLPQQSPR+  S+ SYDGSPLRQA+EA CAK +P++SSP
Sbjct: 221 KDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSSP 280

Query: 241 GT-SPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNV 300
           G+ SPP SP  ESPP SP+  SL+R  G++SINEMVASLR LQL+    KV+S  SSW V
Sbjct: 281 GSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLS----KVKSAPSSWCV 340

Query: 301 QVGSP-VFGSPKESTARSGLCSLPDTPTRPVSRY-LDFWDLGCGEEPAMERVESGRDLRA 360
            +GSP  FGSP+ S  R G CSLP TPTR   R+ L F DL   EEPAMERVESGRDLRA
Sbjct: 341 HMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDL-FEEEPAMERVESGRDLRA 400

Query: 361 KMFEKLRKENSVGCGDQDKYSGNGGLDVGWISEL 391
           KMFEKL KENS+     D  +   G DVGW+SEL
Sbjct: 401 KMFEKLSKENSL--DRPDPSASGAGPDVGWVSEL 426

[Close]
BLAST of Lsi11G002040 vs. TrEMBL
Match: W9QLG3_9ROSA (Zinc finger CCCH domain-containing protein 49 OS=Morus notabilis GN=L484_005486 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 3.5e-138
Identity = 263/401 (65.59%), Postives = 306/401 (76.31%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTF-MEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYL 60
           M++GE P RPNPTV VPPWT  +ED   ++YS  P SG S  S   +G S  G YSPYYL
Sbjct: 1   MMLGE-PHRPNPTVHVPPWTLTLEDPTAEIYSPFPLSGVSVNSSDSNGNS--GEYSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
            EAL  L  Y+ + +A+ DSD ++SGRE DSPVDAYS D FRM+EFK+++C RGRSHDWT
Sbjct: 61  HEALTALSPYM-AGDADADSDSEISGRESDSPVDAYSCDHFRMFEFKVRRCARGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQP 180
           ECP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPYAHPGEKARRRDPRKYHYSGTACPDFRKGHCKKGDSCEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPDQLRVL-PQQSPRSTSSIPSYDGSPLRQAIEACAKQIPYLSS 240
           CKDGTSCRRRVCFFAHTPDQLRVL PQQSP+ ++S+ SYDGSPLRQ      K +P+ SS
Sbjct: 181 CKDGTSCRRRVCFFAHTPDQLRVLPPQQSPKGSNSVDSYDGSPLRQ-----GKTLPFFSS 240

Query: 241 ---PGTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSS 300
                 SPP SP  ESPP SPM + L+R  G+SS+NEMVASLR+LQL     KV+S  S 
Sbjct: 241 FSPTSISPPTSPPAESPPMSPMTQVLSRSLGSSSVNEMVASLRNLQLG----KVKSLPSC 300

Query: 301 W-NVQVGSPVFGSPKESTARSGLCSLPDTPTR-PVSR--YLDFWDLGCGEEPAMERVESG 360
           W N Q GSPVFGSP+ S  R G  SLP TPTR P +R  ++DF+DLGC EEPAMERVESG
Sbjct: 301 WNNTQKGSPVFGSPRGSMLRPGFSSLPTTPTRAPTARPGFMDFYDLGCEEEPAMERVESG 360

Query: 361 RDLRAKMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           RDLRAKM +KL KENS+G  + +  SG G  DVGW+SEL+K
Sbjct: 361 RDLRAKMLQKLSKENSLGRVNPNLSSG-GAPDVGWVSELVK 387

[Close]
BLAST of Lsi11G002040 vs. TrEMBL
Match: M5VWV8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007297mg PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 8.9e-134
Identity = 258/403 (64.02%), Postives = 299/403 (74.19%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGY-SPYYL 60
           M++GE P RPNPTV VPPW  ++D   +VYS  P SG S   V  +G ++G  Y SPYYL
Sbjct: 1   MMLGE-PHRPNPTVHVPPWLQLDDPTAEVYSPFPLSGVS---VNSEGNANGADYNSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
            EAL   +RYLPSNE + DSD D+S RE DSPVDAYS D FRM+EFK+++C RGRSHDWT
Sbjct: 61  HEALTTFQRYLPSNETDPDSDSDISVRESDSPVDAYSCDHFRMFEFKVRRCARGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQP 180
           ECP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPYAHPGEKARRRDPRKYHYSGTACPDFRKGHCKKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSI---PSYDGSPLRQAIEA---CAKQI 240
           CKDGTSC+RRVCFFAHTP+QLRVLPQQSPR ++S+    SYDGSPLRQAIEA   C K +
Sbjct: 181 CKDGTSCKRRVCFFAHTPEQLRVLPQQSPRGSNSLSTAESYDGSPLRQAIEAAASCGKTL 240

Query: 241 PYLSSPGTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPS 300
           P+LSS   +P  SP I SPP SPM +SL+R  G++S+NE+VASLR+LQL     KV+S  
Sbjct: 241 PFLSS---TPEESPEI-SPPVSPMTRSLSRSLGSNSVNEVVASLRNLQLG----KVKSLP 300

Query: 301 SSWNVQVGSPVFGSPKESTARSGLCSLPDTPTRPVSR----YLDFWDLGCGEEPAMERVE 360
           SSWNVQVGS                 LP TPTR   R    YLDF + GC EEPAMERVE
Sbjct: 301 SSWNVQVGS---------------SGLPSTPTRVPGRSGIGYLDFCEEGCEEEPAMERVE 360

Query: 361 SGRDLRAKMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           SGR LRAKMFE+LR+ENS+  G  +     G  DVGW+SEL+K
Sbjct: 361 SGRGLRAKMFERLREENSL--GRVESGPSGGAPDVGWVSELVK 374

[Close]
BLAST of Lsi11G002040 vs. TAIR10
Match: AT2G19810.1 (AT2G19810.1 CCCH-type zinc finger family protein)

HSP 1 Score: 395.6 bits (1015), Expect = 3.6e-110
Identity = 213/396 (53.79%), Postives = 266/396 (67.17%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +  NPTV +PPW   ED  +     SP  G S                   + 
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSPDGGSS-------------------MM 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + DSD D+SG   DSP+DAY+ D FRMYEFK+++C RGRSHDWTE
Sbjct: 61  EALAELQRYLPSNEPDPDSDPDLSGP--DSPIDAYTCDHFRMYEFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC +FRKG C +GDACEF+HGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYD--GSPLRQAIEACAKQIPYLSS 240
           KDG +CRRRVCFFAH+PDQ+RVLP QSP     + S+D     +R+A +        +S 
Sbjct: 181 KDGGNCRRRVCFFAHSPDQIRVLPNQSP---DRVDSFDVLSPTIRRAFQFS------ISP 240

Query: 241 PGTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNV 300
              SPPVSPR +S     +   L+R  G++  N++VASLR+LQLNK      S SSS+N 
Sbjct: 241 SSNSPPVSPRGDSDSSCSL---LSRSLGSNLGNDVVASLRNLQLNK---VKSSLSSSYNN 300

Query: 301 QVG--SPVFGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMERVESGRDLRA 360
           Q+G     FGSP+ S    G  SLP TPTRP   +++ W+ G  EEPAMERVESGR+LRA
Sbjct: 301 QIGGYGSGFGSPRGSVLGPGFRSLPTTPTRP--GFMNIWENGLEEEPAMERVESGRELRA 358

Query: 361 KMFEKLRKENSVGCGDQDKYSGNGGL-DVGWISELL 392
           ++FEKL KEN +G  + D   G G   DVGW+S+L+
Sbjct: 361 QLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]
BLAST of Lsi11G002040 vs. TAIR10
Match: AT4G29190.1 (AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 361.3 bits (926), Expect = 7.5e-100
Identity = 207/396 (52.27%), Postives = 258/396 (65.15%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  +R  PTV++PPW  +E+     +         S  +    CS         + 
Sbjct: 1   MMIGET-RRTYPTVEIPPWPVLEELTTSEFF--------SPVMNSPDCS---------ML 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALA L+RYLPSNE + +S  D+ G   DSP+DAYS D FRMY+FK+++C RGRSHDWTE
Sbjct: 61  EALAGLQRYLPSNEPDPESYPDLLGP--DSPIDAYSCDHFRMYDFKVRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYD-GSPLRQAIEACAKQIPYLSSP 240
           KDG +C R++CFFAH+PDQLR L  +SP     + S+D  SP+R    A A Q+  +S  
Sbjct: 181 KDGGNCLRKICFFAHSPDQLRFLHTRSP---DRVDSFDVSSPIR----ARAFQLS-ISPV 240

Query: 241 GTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQ 300
             SPP+SPR +S   SPM +SL+R  G+ SIN++V S R+LQ N          S  +  
Sbjct: 241 SGSPPMSPRADS-ESSPMTQSLSRSLGSCSINDVVPSFRNLQFN----------SVKSFP 300

Query: 301 VGSPV--FGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMER-VESGRDLRA 360
             +P+  FGSP+ S    G  SLP TPTRP +  LD W+ G  EEP MER VESGR+LR 
Sbjct: 301 RNNPLFGFGSPRGSILGPGFQSLPTTPTRPGN--LDIWEYGLEEEPVMERVVESGRELRE 355

Query: 361 KMFEKLRKENSVGCGDQDKYSGNG-GLDVGWISELL 392
           KM EKL KEN +    QD     G   DVGW+S+LL
Sbjct: 361 KMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]
BLAST of Lsi11G002040 vs. TAIR10
Match: AT2G25900.1 (AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 299.3 bits (765), Expect = 3.5e-81
Identity = 174/372 (46.77%), Postives = 220/372 (59.14%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE   RP+PT+ +P W  + D    +   SP S  +  SV      +   +SP    
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATI--SSPFSSVNLNSV------NDYPHSPSPYL 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           ++ A L RYLPSNE   DSD   SG E     D++SSD+FR+YEFKI++C RGRSHDWTE
Sbjct: 61  DSFASLFRYLPSNELTNDSDSS-SGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPR+++YSGTAC +FRKGSC +GD+CEF+HGVFECWLHP+RYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQIPYLSSPG 240
           KDGTSCRRR+CFFAHT +QLRVLP               SP               +S  
Sbjct: 181 KDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------------TSIL 240

Query: 241 TSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQV 300
            SP  SP  ESPP SP            S  E++AS+R +QLN   C       SW+   
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIASMRKMQLNGGGC-------SWS--- 300

Query: 301 GSPVFGSPKESTARSGLCSLP-DTPTRPV--SRYLDFWDLGCGEEPAMERVESGRDLRAK 360
                 SP  S  R     LP  +  RP+  + +    +    E PAME VESG++LRA+
Sbjct: 301 ------SPMRSAVR-----LPFSSSLRPIQAATWPRIREFEIEEAPAMEFVESGKELRAE 315

Query: 361 MFEKLRKENSVG 370
           M+ +L +ENS+G
Sbjct: 361 MYARLSRENSLG 315

[Close]
BLAST of Lsi11G002040 vs. TAIR10
Match: AT1G03790.1 (AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-53
Identity = 112/237 (47.26%), Postives = 144/237 (60.76%), Query Frame = 1 

Query: 93  DAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRK-G 152
           D Y+SD FRM+EFKI++CTR RSHDWT+CPFAHPGEKARRRDPRR+ YSG  C +FR+ G
Sbjct: 76  DPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGG 135

Query: 153 SCMKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPRST 212
            C +GD CEFAHGVFECWLHP RYRT+ CKDG  C+R+VCFFAH+P QLRVLP ++    
Sbjct: 136 DCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGV 195

Query: 213 SSIPS----------YDGSPLRQAIEACAKQIPYLS-SPGTSPPVSPRIESPPQSPM--- 272
           S+ PS             SP    +      + +LS SP  SPP+SP  ++   S +   
Sbjct: 196 SASPSPAAKNPCCLFCSSSPTSTLL----GNLSHLSRSPSLSPPMSPANKAAAFSRLRNR 255

Query: 273 -IKSLNRPHGTSSIN------EMVASLRSLQLNKELCKVQSPSSSWNVQVGSPVFGS 308
              +++      S+N      E+V SL S+ L + L    S   +  V   +  F S
Sbjct: 256 AASAVSAAAAAGSMNYKDVLSELVNSLDSMSLAEALQASSSSPVTTPVSAAAAAFAS 308

[Close]
BLAST of Lsi11G002040 vs. TAIR10
Match: AT5G44260.1 (AT5G44260.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 206.5 bits (524), Expect = 3.1e-53
Identity = 106/230 (46.09%), Postives = 139/230 (60.43%), Query Frame = 1 

Query: 93  DAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADF-RKG 152
           D Y+ D FRMYEFKI++CTR RSHDWT+CPF+HPGEKARRRDPRR++Y+G  C +F R G
Sbjct: 54  DPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHG 113

Query: 153 SCMKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPRST 212
            C +GD C FAHGVFECWLHP+RYRT+ CKDG  C+R+VCFFAH+P QLRVLP       
Sbjct: 114 DCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHI 173

Query: 213 S-----SIPSYDGSPLRQAIEAC---------AKQIPYLSSPGTSPPVSPRIESPPQSPM 272
           S     S  S   S L      C         +  +    SP +SPP+SP  ++   S +
Sbjct: 174 SGGCGGSPSSSPASVLSNKNNRCCLFCSHSPTSTLLNLSRSPSSSPPLSPADKADAFSRL 233

Query: 273 IKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQVGSPVFGS 308
            +       T+ +NE+++SL SL L + L    S   +  +   + +  S
Sbjct: 234 SR-----RRTAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASS 278

[Close]
BLAST of Lsi11G002040 vs. NCBI nr
Match: gi|659071306|ref|XP_008459142.1| (PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis melo])

HSP 1 Score: 748.8 bits (1932), Expect = 4.7e-213
Identity = 362/396 (91.41%), Postives = 378/396 (95.45%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSH-SPGSGGSSGSVKCDGCSSGGGYSPYYL 60
           MIVGEQPKR NPTVQ+PPWTF+ED+ +DVYSH SPGSGGSSGSVKCDGCSSGGGYSPYYL
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDTGMDVYSHSSPGSGGSSGSVKCDGCSSGGGYSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
           QEALAMLKRYLPSNEAEMDSD DVSG+E+DSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT
Sbjct: 61  QEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQP 180
           ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSC+KGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQIPYLSSP 240
           CKDGTSCRRRVCFFAHTP+QLRVLPQQSPRST+SIPSYDGSPLRQAIEACAKQ+PYLSSP
Sbjct: 181 CKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAKQMPYLSSP 240

Query: 241 GTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSP--SSSWN 300
           GTSPPVSPRIESPPQSP+IKSLNRPH  SSINEM+ASLR+LQLNKELCKVQSP  SSSWN
Sbjct: 241 GTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQSPSSSSSWN 300

Query: 301 VQVGSPVFGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMERVESGRDLRAK 360
           VQVGSPVFGSPK+ST RSGL SLP+T T P  RYLDFW+LG GEEPAMERVESGRDLRAK
Sbjct: 301 VQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVESGRDLRAK 360

Query: 361 MFEKLRKENSVGCGDQDKYSGN-GGLDVGWISELLK 393
           MFEKLRKENSVGCGDQDK SG  GGLDVGWISELLK
Sbjct: 361 MFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

[Close]
BLAST of Lsi11G002040 vs. NCBI nr
Match: gi|778665696|ref|XP_011648617.1| (PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis sativus])

HSP 1 Score: 739.6 bits (1908), Expect = 2.9e-210
Identity = 357/396 (90.15%), Postives = 373/396 (94.19%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           MIVGEQPKR NPTVQ+P W+F+EDS +DVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ
Sbjct: 1   MIVGEQPKRTNPTVQIPQWSFLEDSGMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EALAMLKRYLPSNEAEMDSD DVSG+E+DSP+DAYSSDQFRMYEFKIKKCTRGRSHDWTE
Sbjct: 61  EALAMLKRYLPSNEAEMDSDIDVSGKEIDSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CPFAHPGEKARRRDPRRYYYSGTACADFRKGSC+KGDACEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQIPYLSSPG 240
           KDGTSCRRRVCFFAHTP+QLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQ+PYLSSPG
Sbjct: 181 KDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPG 240

Query: 241 TSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSP---SSSWN 300
           TSPPVSPRIESPPQSP+IKSLNRPH  SSI EMVASLR+LQLNKELCK+ SP   SSSWN
Sbjct: 241 TSPPVSPRIESPPQSPIIKSLNRPHAPSSIKEMVASLRNLQLNKELCKLPSPSSSSSSWN 300

Query: 301 VQVGSPVFGSPKESTARSGLCSLPDTPTRPVSRYLDFWDLGCGEEPAMERVESGRDLRAK 360
           VQVGSPVFGSPKEST R GL +LP+T T P  RYLDFWDLG GEEPAMERVESGRDLRAK
Sbjct: 301 VQVGSPVFGSPKESTTRPGLSTLPETSTPPGIRYLDFWDLGTGEEPAMERVESGRDLRAK 360

Query: 361 MFEKLRKENSVGCGDQDK-YSGNGGLDVGWISELLK 393
           MFEKLRKENSVGCGDQDK  SG GGLDV WISELL+
Sbjct: 361 MFEKLRKENSVGCGDQDKNSSGAGGLDVDWISELLQ 396

[Close]
BLAST of Lsi11G002040 vs. NCBI nr
Match: gi|802627770|ref|XP_012076821.1| (PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas])

HSP 1 Score: 515.4 bits (1326), Expect = 8.8e-143
Identity = 257/394 (65.23%), Postives = 301/394 (76.40%), Query Frame = 1 

Query: 5   EQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALA 64
           ++  RPN TV VPPW  +ED+  + Y  S  S  S  +      ++   Y+PYYLQEALA
Sbjct: 4   DERHRPNTTVHVPPWALIEDANPEGYLSSQLSPHSGNA------ATASDYNPYYLQEALA 63

Query: 65  MLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFA 124
            L+RYLPSNE + DSD +VSG E DSPVDA+S D FRM+EFK+++C RGRSHDWTECP+A
Sbjct: 64  ALQRYLPSNEPDFDSDSEVSGLEPDSPVDAFSCDHFRMFEFKVRRCARGRSHDWTECPYA 123

Query: 125 HPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPCKDGT 184
           HPGEKARRRDPR+Y+YSGTAC DFRKG+C KGDACEFAHGVFECWLHP RYRTQPCKDGT
Sbjct: 124 HPGEKARRRDPRKYHYSGTACPDFRKGNCKKGDACEFAHGVFECWLHPGRYRTQPCKDGT 183

Query: 185 SCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEA-CAKQIPYLSSPGT-S 244
           +CRRRVCFFAHTP+QLRVLPQQSPRS +S+ SYDGSP RQAIEA CAK +P+LSSPG+ S
Sbjct: 184 NCRRRVCFFAHTPEQLRVLPQQSPRSVNSVESYDGSPFRQAIEASCAKSLPFLSSPGSIS 243

Query: 245 PPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNVQVGS 304
           PP +P  +SPP SPM + L+R  G++SINEM+ASLR+LQL     KV+S  +SWNVQVG 
Sbjct: 244 PPATPPADSPPMSPMTQCLSRSVGSNSINEMMASLRNLQLG----KVKSLPASWNVQVGG 303

Query: 305 PVFGSPKESTARSGLCSLPDTPTRPVSR----YLDFWDLGCGEEPAMERVESGRDLRAKM 364
             +GSP+ S  RSG CSLP TPT   +R    Y D W+  C EEP MERVESGRDLR KM
Sbjct: 304 SGYGSPRGSNIRSGFCSLPTTPTSAPTRSGLCYRDVWERVCEEEPPMERVESGRDLRVKM 363

Query: 365 FEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           FEKL KENS+G  D D        DVGW+SELLK
Sbjct: 364 FEKLSKENSLGRVDPDPVQSANAPDVGWVSELLK 387

[Close]
BLAST of Lsi11G002040 vs. NCBI nr
Match: gi|645274677|ref|XP_008242454.1| (PREDICTED: zinc finger CCCH domain-containing protein 20-like [Prunus mume])

HSP 1 Score: 506.1 bits (1302), Expect = 5.4e-140
Identity = 268/411 (65.21%), Postives = 309/411 (75.18%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGY-SPYYL 60
           M++GE P RPNPTV VPPW  ++D   +VYS  P SG S   V  +G ++G  Y SPYYL
Sbjct: 1   MMLGE-PHRPNPTVHVPPWLQLDDPTAEVYSPFPLSGVS---VNSEGNANGADYNSPYYL 60

Query: 61  QEALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWT 120
            EAL   +RYLPSNE + DSD D+S RE DSPVDAYS D FRM+EFK+++C RGRSHDWT
Sbjct: 61  HEALTTFQRYLPSNETDPDSDSDISVRESDSPVDAYSCDHFRMFEFKVRRCARGRSHDWT 120

Query: 121 ECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQP 180
           ECP+AHPGEKARRRDPR+Y+YSGTAC DFRKG C KGDACEFAHGVFECWLHPARYRTQP
Sbjct: 121 ECPYAHPGEKARRRDPRKYHYSGTACPDFRKGHCKKGDACEFAHGVFECWLHPARYRTQP 180

Query: 181 CKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSI---PSYDGSPLRQAIEA---CAKQI 240
           CKDGTSC+RRVCFFAHTP+QLRVLPQQSPR ++S+    SYDGSPLRQAIEA   C K +
Sbjct: 181 CKDGTSCKRRVCFFAHTPEQLRVLPQQSPRGSNSLSTAESYDGSPLRQAIEAAASCGKTL 240

Query: 241 PYLSSPGTSPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPS 300
           P+LSS   +P  SP I SPP SPM +SL+R  G++S+NEMVASLR+LQL     KV+S  
Sbjct: 241 PFLSS---TPEESPEI-SPPVSPMTRSLSRSLGSNSVNEMVASLRNLQLG----KVKSLP 300

Query: 301 SSWNVQVGSPVFG--------SPKESTARSGLCSLPDTPTRPVSR----YLDFWDLGCGE 360
           SSWNVQVGS  FG        SP+ S  R G CSLP TPTR   R    YLDF + GC E
Sbjct: 301 SSWNVQVGSSGFGSPGSPGFVSPRGSILRPGFCSLPSTPTRVPGRSGIGYLDFCEEGCEE 360

Query: 361 EPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           EPAMERVESGR LRAKMFE+LR+ENS+  G  +     G  DVGW+SEL+K
Sbjct: 361 EPAMERVESGRGLRAKMFERLREENSL--GRVESGPSGGAPDVGWVSELVK 397

[Close]
BLAST of Lsi11G002040 vs. NCBI nr
Match: gi|731406660|ref|XP_002283114.2| (PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis vinifera])

HSP 1 Score: 501.5 bits (1290), Expect = 1.3e-138
Identity = 258/396 (65.15%), Postives = 303/396 (76.52%), Query Frame = 1 

Query: 1   MIVGEQPKRPNPTVQVPPWTFMEDSAIDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQ 60
           M++GE  + PNPTV VPPW   +D  +D+    P SG S  S        GG +SP+ L 
Sbjct: 41  MMIGES-RHPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLLG 100

Query: 61  EALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTE 120
           EAL  L+RYLPSN+ ++DSD D+SGRE D PVDAYS D FRM+EFK+++C RGRSHDWTE
Sbjct: 101 EALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTE 160

Query: 121 CPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPC 180
           CP+AHPGEKARRRDPR+++YSGTAC DFRKG+C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 161 CPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPC 220

Query: 181 KDGTSCRRRVCFFAHTPDQLRVLPQQSPRSTSSIPSYDGSPLRQAIEA-CAKQIPYLSSP 240
           KDG +CRRRVCFFAHT +QLRVLPQQSPR+  S+ SYDGSPLRQA+EA CAK +P++SSP
Sbjct: 221 KDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSSP 280

Query: 241 GT-SPPVSPRIESPPQSPMIKSLNRPHGTSSINEMVASLRSLQLNKELCKVQSPSSSWNV 300
           G+ SPP SP  ESPP SP+  SL+R  G++SINEMVASLR LQL+    KV+S  SSW V
Sbjct: 281 GSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLS----KVKSAPSSWCV 340

Query: 301 QVGSP-VFGSPKESTARSGLCSLPDTPTRPVSRY-LDFWDLGCGEEPAMERVESGRDLRA 360
            +GSP  FGSP+ S  R G CSLP TPTR   R+ L F DL   EEPAMERVESGRDLRA
Sbjct: 341 HMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDL-FEEEPAMERVESGRDLRA 400

Query: 361 KMFEKLRKENSVGCGDQDKYSGNGGLDVGWISELLK 393
           KMFEKL KENS+     D  +   G DVGW+SEL+K
Sbjct: 401 KMFEKLSKENSL--DRPDPSASGAGPDVGWVSELVK 428

The following BLAST results are available for this feature:
BLAST of Lsi11G002040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H20_ARATH6.4e-10953.79Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g198... [more]
C3H2_ORYSJ5.4e-10052.25Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=... [more]
C3H49_ARATH1.3e-9852.27Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g291... [more]
C3H35_ORYSJ5.3e-8749.03Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN... [more]
C3H23_ARATH6.2e-8046.77Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g259... [more]
BLAST of Lsi11G002040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067KPP4_JATCU6.2e-14365.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07335 PE=4 SV=1[more]
F6HGX4_VITVI9.2e-13965.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02790 PE=4 SV=... [more]
A5C465_VITVI1.6e-13865.48Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013303 PE=4 SV=1[more]
W9QLG3_9ROSA3.5e-13865.59Zinc finger CCCH domain-containing protein 49 OS=Morus notabilis GN=L484_005486 ... [more]
M5VWV8_PRUPE8.9e-13464.02Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007297mg PE=4 SV=1[more]
BLAST of Lsi11G002040 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19810.13.6e-11053.79 CCCH-type zinc finger family protein[more]
AT4G29190.17.5e-10052.27 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G25900.13.5e-8146.77 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT1G03790.12.4e-5347.26 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G44260.13.1e-5346.09 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Lsi11G002040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071306|ref|XP_008459142.1|4.7e-21391.41PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis melo][more]
gi|778665696|ref|XP_011648617.1|2.9e-21090.15PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis sativus][more]
gi|802627770|ref|XP_012076821.1|8.8e-14365.23PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas][more]
gi|645274677|ref|XP_008242454.1|5.4e-14065.21PREDICTED: zinc finger CCCH domain-containing protein 20-like [Prunus mume][more]
gi|731406660|ref|XP_002283114.2|1.3e-13865.15PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G002040.1Lsi11G002040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 144..166
score: 6.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 174..197
score: 14.0coord: 139..165
score: 0.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 139..166
score: 12.371coord: 174..198
score: 6
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 138..168
score: 9.2
NoneNo IPR availablePANTHERPTHR14493UNCHARACTERIZEDcoord: 61..368
score: 3.3E
NoneNo IPR availablePANTHERPTHR14493:SF41SUBFAMILY NOT NAMEDcoord: 61..368
score: 3.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G002040Csa2G000630Cucumber (Chinese Long) v2culsiB098
Lsi11G002040CSPI02G00610Wild cucumber (PI 183967)cpilsiB096
Lsi11G002040Cucsa.116850Cucumber (Gy14) v1cgylsiB163
Lsi11G002040CmaCh11G006710Cucurbita maxima (Rimu)cmalsiB102
Lsi11G002040CmaCh12G012840Cucurbita maxima (Rimu)cmalsiB159
Lsi11G002040CmaCh10G006900Cucurbita maxima (Rimu)cmalsiB049
Lsi11G002040CmoCh10G007170Cucurbita moschata (Rifu)cmolsiB035
Lsi11G002040CmoCh11G006830Cucurbita moschata (Rifu)cmolsiB088
Lsi11G002040CmoCh12G013190Cucurbita moschata (Rifu)cmolsiB148
Lsi11G002040Cla016816Watermelon (97103) v1lsiwmB116
Lsi11G002040Cla011237Watermelon (97103) v1lsiwmB092
Lsi11G002040MELO3C004610Melon (DHL92) v3.5.1lsimeB116
Lsi11G002040ClCG11G001920Watermelon (Charleston Gray)lsiwcgB078
Lsi11G002040MELO3C015436.2Melon (DHL92) v3.6.1lsimedB109
Lsi11G002040MELO3C004610.2Melon (DHL92) v3.6.1lsimedB124
Lsi11G002040Cla97C03G066180Watermelon (97103) v2lsiwmbB091
Lsi11G002040Cla97C11G208310Watermelon (97103) v2lsiwmbB074
Lsi11G002040Bhi02G001603Wax gourdlsiwgoB140
Lsi11G002040Bhi06G001434Wax gourdlsiwgoB100
Lsi11G002040Cp4.1LG07g10590Cucurbita pepo (Zucchini)cpelsiB660
Lsi11G002040CsGy2G000570Cucumber (Gy14) v2cgyblsiB089
Lsi11G002040Carg12262Silver-seed gourdcarlsiB033
Lsi11G002040Carg18611Silver-seed gourdcarlsiB815
Lsi11G002040CsaV3_2G001650Cucumber (Chinese Long) v3cuclsiB108
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi11G002040Lsi06G002480Bottle gourd (USVL1VR-Ls)lsilsiB059
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G002040Wild cucumber (PI 183967)cpilsiB013
Lsi11G002040Cucumber (Chinese Long) v2culsiB013
Lsi11G002040Melon (DHL92) v3.5.1lsimeB110
Lsi11G002040Melon (DHL92) v3.5.1lsimeB103
Lsi11G002040Watermelon (Charleston Gray)lsiwcgB103
Lsi11G002040Watermelon (Charleston Gray)lsiwcgB115
Lsi11G002040Watermelon (97103) v1lsiwmB096
Lsi11G002040Cucumber (Gy14) v2cgyblsiB010
Lsi11G002040Melon (DHL92) v3.6.1lsimedB118
Lsi11G002040Silver-seed gourdcarlsiB083
Lsi11G002040Silver-seed gourdcarlsiB175
Lsi11G002040Silver-seed gourdcarlsiB514
Lsi11G002040Silver-seed gourdcarlsiB812
Lsi11G002040Cucumber (Chinese Long) v3cuclsiB011
Lsi11G002040Watermelon (97103) v2lsiwmbB102
Lsi11G002040Wax gourdlsiwgoB113
Lsi11G002040Bottle gourd (USVL1VR-Ls)lsilsiB062
Lsi11G002040Cucumber (Gy14) v1cgylsiB470
Lsi11G002040Cucurbita maxima (Rimu)cmalsiB157
Lsi11G002040Cucurbita maxima (Rimu)cmalsiB228
Lsi11G002040Cucurbita maxima (Rimu)cmalsiB402
Lsi11G002040Cucurbita maxima (Rimu)cmalsiB715
Lsi11G002040Cucurbita moschata (Rifu)cmolsiB146
Lsi11G002040Cucurbita moschata (Rifu)cmolsiB216
Lsi11G002040Cucurbita moschata (Rifu)cmolsiB387
Lsi11G002040Cucurbita moschata (Rifu)cmolsiB706
Lsi11G002040Cucurbita pepo (Zucchini)cpelsiB074
Lsi11G002040Cucurbita pepo (Zucchini)cpelsiB078
Lsi11G002040Cucurbita pepo (Zucchini)cpelsiB282
Lsi11G002040Cucurbita pepo (Zucchini)cpelsiB527
Lsi11G002040Cucurbita pepo (Zucchini)cpelsiB658