Lsi11G000670 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACACATTGATCATATGAAGTGGTAATTACCCCAATTTTCATATCTAAGCAAAATTAAGCATAATAAGTAAGAATAATTCTCTCTTTTTTGTGATAGAGTTTGATGGCTACAACCAATTTATCAAACGAAATAATAATGGAAGCAGAAACCACAAAAACAATTGTAATAAGTGGAGTGAGCAAAGGGTTAGGACGAGCTTTGGCATTGGAGTTGGCTAAACGTGGTCATACAATTATTGGTTGTGGTCGTGACAATATCAAATTGGATTCTCTTCAATTACAACTCTCTAATGTTTCCTCAAGAAACCATTTGCTCTTCAACCTTGATGTGGTAATTTCTATTTCTTTTTTCTTTAATAATGTTTCTAAGTGTGTATTTATAAAAATTTAATAGTTTTAATTATCTGTTAATTTTGCAGAAATCAAATGACAGCATCCGAGAAATGGCAAACACGGTTAGAGAGAAATTTGGTTCTATTGACATAATTGGTATATTTATATATAGTTTCGTTTAATTTTTAACAATTGGATTTAATTAAGTAATGAAAATGGAGTGTTTTAATTTAATTTTGACAGTAAATAATGCGAGTGTGGTTAATGAAAATTTGAAGATGTGGGAAATTCCTAGTGAAATGTTCGATAATGTAATAGACATAAACATAAAAGGAGTAGCAAATGTGATGCGTCACTTCATTCCACTTATGCTTCCTAAGAATGAAGGAATTATTGTTAATATTTCTTCTCTCTTTGGAAGAATTGGAGCTCCCCAGGTACGTATATGCTGCTACACTAACCCAATTTTCATCAACATCTTCAAACAATTTCCATCAGAATTTTATCTCTGTCCGTCATTGTATCCCGTCCCTACTGACATTAAAGGTGTCATTTATTTTTGTGGATTTCCAATAAGGCTTCTTGAAAGTAAAAGGCTCACCCTATCCTAAAAAAAAAACTGCCTTTCATCCTTAAACTTTTATCGAAGTAATTATTTATCATTTTATAATTATTTATTCCTTTGAGTAACCATTTAGGTTATGGAAATTAAGTTTGTTACAAAGATTTGTATATCTCTTAGGTAAAAGAATTGAATTGTAGTCACAAATTTCAAAAACAAAAATAAGATTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTAGTTGATTTTTTTAAAACATTGATAAAAAGTAAATAATAAACAAGAACTTTAAAGGTAGAAATTGTATTTATAGGCTCAATTTTCAAAAATTAAAAAGAAAAAATCAAATGGCTAACAAATAGGATTTTAGCTTTTCATGAATTTAAGCATATAACAATTTAATCTCTATACTTTAATCTCAATATATACTTTCAAATTTTTAACAAGTCACTATCGAAAAAATTCTTATCAAACTTTATTATCAATTTTGATTATATAACGACTACATAACCATTGATATGAGTCTATTAATAATAAAGTTCTACAATAGATAGATTTTGCTATCTATGATATAGAAGTCTATCACGGATAGATTTTGCATTTATCACTTAAATAAACTAATAGACTTTTATCATTGTCTATTACTATAGATTTCAATCGAATATTTTTTATGAGCTGATGTAAATTGTACTATAAATGTAGATTTTATTACACTGTGCTATATTTGCTATTATTTTGGACGTGATTCTTATATTTACAAAGGTCACATTTTATTACACAGGCTTCGGCTTATTGTAGTTCAAAATGGGCGATCGAAGGTTTAAGCAAATCTGTTGTGAAAGAGCTACCAAATGGAATGACGATAGTAACATTAGATCCTGGCGTTATTAATACTGATATGTGTGTTTCTTTTCTTGGCCATAATTTAGCTTCTCAATACCAATCTCCTCAAGAATGGTATGCTTACAAATATTTCTATTTATTCTTAATCAACATTTTTCTAAATAAATAATCAACATGATATATCTTCTATTAATCATATGGAAAACCCCCCAACTATATAAGCCTCAAGACTTTTAATTTTGAATAAATTAAATTTTGAACTATTAGAAACTATCTTTCTAGAAACCAATATGGTATTTTAATTATGAGCATACATTCAATGTTTAATGTGTTTGTGTTAGGGTCCTCAAAGCAGTTCCGATGATTCTAAACATTACAATTGCTGATAATGGTGCAACTCTCATCGTTCCTGATCCTAGTGTTTTACCTGATTTTTAATATTATTGCAAAAGGAAGGGAAAAAAAACTCCGAGCAAATATTATTTGTGTTGCTTCATTGTTCAATGTAAATTTTCATCCTTCCCAGTTTGCTTTTTGAAGTAGTTTATAATTGTTGTAATTTTAAGTACTTTAAAATTTCCAACAAGTCCTACTTTTAATTTTGATGATTTCAATATATATATTCCATTTATTATTA AACACATTGATCATATGAAGTGGTAATTACCCCAATTTTCATATCTAAGCAAAATTAAGCATAATAAGTAAGAATAATTCTCTCTTTTTTGTGATAGAGTTTGATGGCTACAACCAATTTATCAAACGAAATAATAATGGAAGCAGAAACCACAAAAACAATTGTAATAAGTGGAGTGAGCAAAGGGTTAGGACGAGCTTTGGCATTGGAGTTGGCTAAACGTGGTCATACAATTATTGGTTGTGGTCGTGACAATATCAAATTGGATTCTCTTCAATTACAACTCTCTAATGTTTCCTCAAGAAACCATTTGCTCTTCAACCTTGATGTGAAATCAAATGACAGCATCCGAGAAATGGCAAACACGGTTAGAGAGAAATTTGGTTCTATTGACATAATTGTAAATAATGCGAGTGTGGTTAATGAAAATTTGAAGATGTGGGAAATTCCTAGTGAAATGTTCGATAATGTAATAGACATAAACATAAAAGGAGTAGCAAATGTGATGCGTCACTTCATTCCACTTATGCTTCCTAAGAATGAAGGAATTATTGTTAATATTTCTTCTCTCTTTGGAAGAATTGGAGCTCCCCAGGTACGTATATGCTGCTACACTAACCCAATTTTCATCAACATCTTCAAACAATTTCCATCAGAATTTTATCTCTGTCCGTCATTGTATCCCGTCCCTACTGACATTAAAGGTGTCATTTATTTTTGTGGATTTCCAATAAGGCTTCTTGAAAAGCTACCAAATGGAATGACGATAGTAACATTAGATCCTGGCGTTATTAATACTGATATGTGTGTTTCTTTTCTTGGCCATAATTTAGCTTCTCAATACCAATCTCCTCAAGAATGGGTCCTCAAAGCAGTTCCGATGATTCTAAACATTACAATTGCTGATAATGGTGCAACTCTCATCGTTCCTGATCCTAGTGTTTTACCTGATTTTTAATATTATTGCAAAAGGAAGGGAAAAAAAACTCCGAGCAAATATTATTTGTGTTGCTTCATTGTTCAATGTAAATTTTCATCCTTCCCAGTTTGCTTTTTGAAGTAGTTTATAATTGTTGTAATTTTAAGTACTTTAAAATTTCCAACAAGTCCTACTTTTAATTTTGATGATTTCAATATATATATTCCATTTATTATTA ATGGCTACAACCAATTTATCAAACGAAATAATAATGGAAGCAGAAACCACAAAAACAATTGTAATAAGTGGAGTGAGCAAAGGGTTAGGACGAGCTTTGGCATTGGAGTTGGCTAAACGTGGTCATACAATTATTGGTTGTGGTCGTGACAATATCAAATTGGATTCTCTTCAATTACAACTCTCTAATGTTTCCTCAAGAAACCATTTGCTCTTCAACCTTGATGTGAAATCAAATGACAGCATCCGAGAAATGGCAAACACGGTTAGAGAGAAATTTGGTTCTATTGACATAATTGTAAATAATGCGAGTGTGGTTAATGAAAATTTGAAGATGTGGGAAATTCCTAGTGAAATGTTCGATAATGTAATAGACATAAACATAAAAGGAGTAGCAAATGTGATGCGTCACTTCATTCCACTTATGCTTCCTAAGAATGAAGGAATTATTGTTAATATTTCTTCTCTCTTTGGAAGAATTGGAGCTCCCCAGGTACGTATATGCTGCTACACTAACCCAATTTTCATCAACATCTTCAAACAATTTCCATCAGAATTTTATCTCTGTCCGTCATTGTATCCCGTCCCTACTGACATTAAAGGTGTCATTTATTTTTGTGGATTTCCAATAAGGCTTCTTGAAAAGCTACCAAATGGAATGACGATAGTAACATTAGATCCTGGCGTTATTAATACTGATATGTGTGTTTCTTTTCTTGGCCATAATTTAGCTTCTCAATACCAATCTCCTCAAGAATGGGTCCTCAAAGCAGTTCCGATGATTCTAAACATTACAATTGCTGATAATGGTGCAACTCTCATCGTTCCTGATCCTAGTGTTTTACCTGATTTTTAA MATTNLSNEIIMEAETTKTIVISGVSKGLGRALALELAKRGHTIIGCGRDNIKLDSLQLQLSNVSSRNHLLFNLDVKSNDSIREMANTVREKFGSIDIIVNNASVVNENLKMWEIPSEMFDNVIDINIKGVANVMRHFIPLMLPKNEGIIVNISSLFGRIGAPQVRICCYTNPIFINIFKQFPSEFYLCPSLYPVPTDIKGVIYFCGFPIRLLEKLPNGMTIVTLDPGVINTDMCVSFLGHNLASQYQSPQEWVLKAVPMILNITIADNGATLIVPDPSVLPDF
BLAST of Lsi11G000670 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.0e-60 Identity = 131/258 (50.78%), Postives = 167/258 (64.73%), Query Frame = 1
BLAST of Lsi11G000670 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.9e-18 Identity = 49/149 (32.89%), Postives = 88/149 (59.06%), Query Frame = 1
BLAST of Lsi11G000670 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.9e-18 Identity = 49/149 (32.89%), Postives = 88/149 (59.06%), Query Frame = 1
BLAST of Lsi11G000670 vs. Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17 Identity = 50/150 (33.33%), Postives = 90/150 (60.00%), Query Frame = 1
BLAST of Lsi11G000670 vs. Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17 Identity = 50/150 (33.33%), Postives = 90/150 (60.00%), Query Frame = 1
BLAST of Lsi11G000670 vs. TrEMBL
Match: A0A0A0KJF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 4.5e-71 Identity = 147/271 (54.24%), Postives = 183/271 (67.53%), Query Frame = 1
BLAST of Lsi11G000670 vs. TrEMBL
Match: A0A0A0KIN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011650 PE=3 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 5.9e-71 Identity = 162/274 (59.12%), Postives = 187/274 (68.25%), Query Frame = 1
BLAST of Lsi11G000670 vs. TrEMBL
Match: A0A0A0KPL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G054570 PE=3 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 5.8e-58 Identity = 129/265 (48.68%), Postives = 160/265 (60.38%), Query Frame = 1
BLAST of Lsi11G000670 vs. TrEMBL
Match: D7KKP2_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471142 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57 Identity = 129/258 (50.00%), Postives = 166/258 (64.34%), Query Frame = 1
BLAST of Lsi11G000670 vs. TrEMBL
Match: A0A0D3DNW4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.2e-57 Identity = 127/260 (48.85%), Postives = 167/260 (64.23%), Query Frame = 1
BLAST of Lsi11G000670 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 235.0 bits (598), Expect = 5.9e-62 Identity = 131/258 (50.78%), Postives = 167/258 (64.73%), Query Frame = 1
BLAST of Lsi11G000670 vs. TAIR10
Match: AT1G24360.1 (AT1G24360.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 3.2e-15 Identity = 49/161 (30.43%), Postives = 86/161 (53.42%), Query Frame = 1
BLAST of Lsi11G000670 vs. TAIR10
Match: AT5G61830.1 (AT5G61830.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13 Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 1
BLAST of Lsi11G000670 vs. TAIR10
Match: AT3G55290.1 (AT3G55290.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 3.0e-13 Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 1
BLAST of Lsi11G000670 vs. TAIR10
Match: AT3G55310.1 (AT3G55310.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12 Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 1
BLAST of Lsi11G000670 vs. NCBI nr
Match: gi|778697976|ref|XP_004149629.2| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sativus]) HSP 1 Score: 320.9 bits (821), Expect = 2.3e-84 Identity = 185/299 (61.87%), Postives = 210/299 (70.23%), Query Frame = 1
BLAST of Lsi11G000670 vs. NCBI nr
Match: gi|778697979|ref|XP_011654452.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sativus]) HSP 1 Score: 314.7 bits (805), Expect = 1.7e-82 Identity = 184/299 (61.54%), Postives = 209/299 (69.90%), Query Frame = 1
BLAST of Lsi11G000670 vs. NCBI nr
Match: gi|449449088|ref|XP_004142297.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]) HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71 Identity = 147/271 (54.24%), Postives = 183/271 (67.53%), Query Frame = 1
BLAST of Lsi11G000670 vs. NCBI nr
Match: gi|700194398|gb|KGN49575.1| (hypothetical protein Csa_5G011650 [Cucumis sativus]) HSP 1 Score: 275.8 bits (704), Expect = 8.5e-71 Identity = 162/274 (59.12%), Postives = 187/274 (68.25%), Query Frame = 1
BLAST of Lsi11G000670 vs. NCBI nr
Match: gi|659131190|ref|XP_008465557.1| (PREDICTED: zerumbone synthase-like [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 5.5e-62 Identity = 130/265 (49.06%), Postives = 168/265 (63.40%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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