Cla001906 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001906
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Short-chain dehydrogenase/reductase SDR (AHRD V1 **-- F0SQ75_PLABD); contains Interpro domain(s) IPR002198 Short-chain dehydrogenase/reductase SDR
Location	Chr11 : 26661284 .. 26663258 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTCCTTGTTTGATGCAAGAAAGGGATGGGAGTAGAGAAGAAGATGAAGCAAATGAAAGCAAGAAAATTGTAATAACTGGTGTGAGCCAAGGGTTAGGACGAGCCTTGGCCTTGGAATTGGCTAGGCGTGGCCATACTATCATCGCCTGTTCTCGCAACCAAACCAACTTGGATTCACTTCAACTACTCCTCTCCAACATTTCTCCGCAACATAACCACTTACTCCTTAATGCTGATGTGGTATGTAAATTTTCTTTTTAATTATCTGCTTTCATAATTAAAATCAAACTTTTACTTTTACTTTTACTTTTATAATTTTTTACTACCTATATGAGAAAATTTTAAGGAAATCTGTTACTTTTTTTGCATCTAATTTCTAATCTTTATTCTCTAACTTTCCATACATTACACTTTTAGTTCAACTACTTATAAGTTTTGAGTTTTATGGTATTCAAATATTACACTTTTTATTTTATTTCAATTTTAACTTAGATCTTTCCCTGAATACTTATTTTTTATTTTGGCATTAGTATCTATTAATTAATTTTAAATAATTATGAAGTGAAATTTTTTTATATTAATTTAATATTAAATTAGTGAAAATTTGAGGTTAATAATGAAAGTTTTGAAAACTAGGGACCAAATTAAAACAATATTCAAACCTCAAAGGTAAAATTGTAACATATATTGAAATCTAGAGACTAAATAAAAAAACAAATTCAAAATTTAAGAATTAAACGTACAACATTTTAAAACTTAGGGACCACTTAAAACTAAATCCAAAATCTAAGGACTAAAATCGTTATAAACAAAACTTTGATTAATTAATGTGGTTGAAATTTTTGGTTTTCAGAGGTCGGATGATAAAGTTAAAGAGATGCTATATACTGTCATGGAGAAAATTGGAGTTCCGGACATCATTGGTATATGCTTGTTAGAATTGTTCTTTCAAGTTTTTTTTTTTTTTTTTCCATATTTCAATTTAGTTGGAAGTAATAAAAATAATTGAGTTTTTTTTTTTTTTTTTTTTTTTGATTATATAGTAAACAATGCTGCTATGATCAATGGGAATGCGAAGATTTGGGAGATTAGTAGAGAAGAGTTTGATGATGTGATTGACACAAATATAAAAGGGACAGCTAATATATTACGTCACTTCATTCCCCTTTTGCTTCCTAAAAACCAAGGCATCATTGTCAATATTAGTTCTATATTTGGAAGAATGGGAGCTCCCCTGGTATGCATTATATTATATGTTTCATTTTTAATCATTTTTACAAAATAATATTTCCTAAAATACTTTTTAAATCTTTTATGAGTAATTCAAGTGGTTTTTGTTTTTGTATTATTATTGGTTTTTTCTTTAGGTTTCGCCATATTGTAGCTCAAAGTGGGGAATTGAAGGGTTAACCAAATCAATAGCAAAAGAATTGCCAAATGGAATGACAATTGTGGCTTTGGACCCTGGGATTATACATACAGAAATGCTTTTATCCAGCTTGGGCAAAATTGCTTCTCAATACCAATCTCCCCAAGAATGGTATGATCATATAATATACAATGTATTTGTTAAATTGCAAATTTGACTCTTATGGTTTAGTCTCATATTAATCATATGAATTAAATTTTTATTTGTAAAATTATAAGGACTGAACTCTAACTCTTTCCAAATCATAGAGATCAAATTTACCATTTAACCCAATATATTTTACTTATACTTATAAATTAAGGTATGATATGATCTTTCTCAATTATGAATTTTACAAAACCATAACAGCTTAACTTTAGCTTAATATATTTAGGTATGATATAATAAGAAATGAAAATTAGGCATTCATTAATATGTTATTGAATGGTTAAAATGGTATTAATCAGGGCTCTGAAGGCAGCTTCGATGATTCTGAGTCTTACAAATGCTGAAAACGGTGCATCTCTAACTGTGGAGGACCCAGGAGCTCTTCCAATGTAG

mRNA sequence

ATGGAAAGTCCTTGTTTGATGCAAGAAAGGGATGGGAGTAGAGAAGAAGATGAAGCAAATGAAAGCAAGAAAATTGTAATAACTGGTGTGAGCCAAGGGTTAGGACGAGCCTTGGCCTTGGAATTGGCTAGGCGTGGCCATACTATCATCGCCTGTTCTCGCAACCAAACCAACTTGGATTCACTTCAACTACTCCTCTCCAACATTTCTCCGCAACATAACCACTTACTCCTTAATGCTGATGTGAGGTCGGATGATAAAGTTAAAGAGATGCTATATACTGTCATGGAGAAAATTGGAGTTCCGGACATCATTGTAAACAATGCTGCTATGATCAATGGGAATGCGAAGATTTGGGAGATTAGTAGAGAAGAGTTTGATGATGTGATTGACACAAATATAAAAGGGACAGCTAATATATTACGTCACTTCATTCCCCTTTTGCTTCCTAAAAACCAAGGCATCATTGTCAATATTAGTTCTATATTTGGAAGAATGGGAGCTCCCCTGGTTTCGCCATATTGTAGCTCAAAGTGGGGAATTGAAGGGTTAACCAAATCAATAGCAAAAGAATTGCCAAATGGAATGACAATTGTGGCTTTGGACCCTGGGATTATACATACAGAAATGCTTTTATCCAGCTTGGGCAAAATTGCTTCTCAATACCAATCTCCCCAAGAATGGGCTCTGAAGGCAGCTTCGATGATTCTGAGTCTTACAAATGCTGAAAACGGTGCATCTCTAACTGTGGAGGACCCAGGAGCTCTTCCAATGTAG

Coding sequence (CDS)

ATGGAAAGTCCTTGTTTGATGCAAGAAAGGGATGGGAGTAGAGAAGAAGATGAAGCAAATGAAAGCAAGAAAATTGTAATAACTGGTGTGAGCCAAGGGTTAGGACGAGCCTTGGCCTTGGAATTGGCTAGGCGTGGCCATACTATCATCGCCTGTTCTCGCAACCAAACCAACTTGGATTCACTTCAACTACTCCTCTCCAACATTTCTCCGCAACATAACCACTTACTCCTTAATGCTGATGTGAGGTCGGATGATAAAGTTAAAGAGATGCTATATACTGTCATGGAGAAAATTGGAGTTCCGGACATCATTGTAAACAATGCTGCTATGATCAATGGGAATGCGAAGATTTGGGAGATTAGTAGAGAAGAGTTTGATGATGTGATTGACACAAATATAAAAGGGACAGCTAATATATTACGTCACTTCATTCCCCTTTTGCTTCCTAAAAACCAAGGCATCATTGTCAATATTAGTTCTATATTTGGAAGAATGGGAGCTCCCCTGGTTTCGCCATATTGTAGCTCAAAGTGGGGAATTGAAGGGTTAACCAAATCAATAGCAAAAGAATTGCCAAATGGAATGACAATTGTGGCTTTGGACCCTGGGATTATACATACAGAAATGCTTTTATCCAGCTTGGGCAAAATTGCTTCTCAATACCAATCTCCCCAAGAATGGGCTCTGAAGGCAGCTTCGATGATTCTGAGTCTTACAAATGCTGAAAACGGTGCATCTCTAACTGTGGAGGACCCAGGAGCTCTTCCAATGTAG

Protein sequence

MESPCLMQERDGSREEDEANESKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLLNADVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANILRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVALDPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTVEDPGALPM

Homology

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BLAST of Cla001906 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-79
Identity = 143/229 (62.45%), Postives = 186/229 (81.22%), Query Frame = 1


Query: 22  SKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLLNAD 81
           ++ ++ITGVS+GLGRALALELA+RGHT+I C+R+Q  L +LQ   S +S   NHLLL AD
Sbjct: 17  ARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQ---SELSSSTNHLLLTAD 76

Query: 82  VRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANIL 141
           V+S+  V+EM +T++EK GVPDIIVNNA  IN N+KIWE+S E+FD+V+DTN+KG AN+L
Sbjct: 77  VKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVL 136

Query: 142 RHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVAL 201
           RHFIPL+LP+ QGIIVN+SS +GR GA LV+PYC+SKW IEGL++++AKE+  GM +VAL
Sbjct: 137 RHFIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSRAVAKEVVEGMAVVAL 196

Query: 202 DPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTV 251
           +PG+I+TE+L S  G  AS YQ+P  WA+KAA+MIL+LT  +NG SLTV
Sbjct: 197 NPGVINTELLTSCFGNSASLYQAPDAWAVKAATMILNLTAGDNGGSLTV 242

[Close]

BLAST of Cla001906 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-27
Identity = 68/191 (35.60%), Postives = 114/191 (59.69%), Query Frame = 1


Query: 22  SKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQH-NHLLLNA 81
           +K  ++TG S+G+GR++AL+LA  G+ +        + D  + ++  I  +      + A
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAV--NYAGSKDKAEAVVEEIKAKGVESFAIQA 61

Query: 82  DVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANI 141
           +V   D+VKEM+  V+ + G  D++VNNA +   N  +  +  +E+DDVIDTN+KG  N 
Sbjct: 62  NVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNL-LMRMKEQEWDDVIDTNLKGVFNC 121

Query: 142 LRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPN-GMTIV 201
           ++   P +L +  G I+N++SI G MG P  + Y ++K G+ GLTK+ A+EL + G+T+ 
Sbjct: 122 IQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVN 181

Query: 202 ALDPGIIHTEM 211
           A+ PG I ++M
Sbjct: 182 AVAPGFIVSDM 189

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BLAST of Cla001906 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-27
Identity = 68/191 (35.60%), Postives = 114/191 (59.69%), Query Frame = 1


Query: 22  SKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQH-NHLLLNA 81
           +K  ++TG S+G+GR++AL+LA  G+ +        + D  + ++  I  +      + A
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAV--NYAGSKDKAEAVVEEIKAKGVESFAIQA 61

Query: 82  DVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANI 141
           +V   D+VKEM+  V+ + G  D++VNNA +   N  +  +  +E+DDVIDTN+KG  N 
Sbjct: 62  NVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNL-LMRMKEQEWDDVIDTNLKGVFNC 121

Query: 142 LRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPN-GMTIV 201
           ++   P +L +  G I+N++SI G MG P  + Y ++K G+ GLTK+ A+EL + G+T+ 
Sbjct: 122 IQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVN 181

Query: 202 ALDPGIIHTEM 211
           A+ PG I ++M
Sbjct: 182 AVAPGFIVSDM 189

[Close]

BLAST of Cla001906 vs. Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.6e-26
Identity = 66/191 (34.55%), Postives = 114/191 (59.69%), Query Frame = 1


Query: 22  SKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQH-NHLLLNA 81
           +K  ++TG S+G+GR++AL+LA  G+ +        + +  + ++  I  +  +   + A
Sbjct: 4   TKSALVTGASRGIGRSIALQLAEEGYNVAV--NYAGSKEKAEAVVEEIKAKGVDSFAIQA 63

Query: 82  DVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANI 141
           +V   D+VK M+  V+ + G  D++VNNA +   N  +  +  +E+DDVIDTN+KG  N 
Sbjct: 64  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL-LMRMKEQEWDDVIDTNLKGVFNC 123

Query: 142 LRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPN-GMTIV 201
           ++   P +L +  G I+N+SS+ G +G P  + Y ++K G+ GLTKS A+EL + G+T+ 
Sbjct: 124 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 183

Query: 202 ALDPGIIHTEM 211
           A+ PG I ++M
Sbjct: 184 AVAPGFIVSDM 191

[Close]

BLAST of Cla001906 vs. Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.6e-26
Identity = 66/191 (34.55%), Postives = 114/191 (59.69%), Query Frame = 1


Query: 22  SKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQH-NHLLLNA 81
           +K  ++TG S+G+GR++AL+LA  G+ +        + +  + ++  I  +  +   + A
Sbjct: 4   TKSALVTGASRGIGRSIALQLAEEGYNVAV--NYAGSKEKAEAVVEEIKAKGVDSFAIQA 63

Query: 82  DVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANI 141
           +V   D+VK M+  V+ + G  D++VNNA +   N  +  +  +E+DDVIDTN+KG  N 
Sbjct: 64  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL-LMRMKEQEWDDVIDTNLKGVFNC 123

Query: 142 LRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPN-GMTIV 201
           ++   P +L +  G I+N+SS+ G +G P  + Y ++K G+ GLTKS A+EL + G+T+ 
Sbjct: 124 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 183

Query: 202 ALDPGIIHTEM 211
           A+ PG I ++M
Sbjct: 184 AVAPGFIVSDM 191

[Close]

BLAST of Cla001906 vs. TrEMBL
Match: A0A0A0KJF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108
Identity = 207/241 (85.89%), Postives = 219/241 (90.87%), Query Frame = 1


Query: 18  EANESKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLL 77
           E N  KKI+ITGVSQGLGRALALELA+RGHTII CSRNQT LD LQ + SNI P +NHLL
Sbjct: 3   EENSGKKILITGVSQGLGRALALELAKRGHTIIGCSRNQTKLDLLQPIFSNIPP-YNHLL 62

Query: 78  LNADVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGT 137
           LN DV+ DDKVKE L  ++EKIGVPDIIVNNAAMIN  AKIWEISREEFDDVIDTNIKGT
Sbjct: 63  LNLDVKLDDKVKETLEIIVEKIGVPDIIVNNAAMINVKAKIWEISREEFDDVIDTNIKGT 122

Query: 138 ANILRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMT 197
           ANILRHFIPLLLPKN+GIIVNISSIFGRMG PLVSPYCSSKWGIEGL+KSIAKELPNGMT
Sbjct: 123 ANILRHFIPLLLPKNKGIIVNISSIFGRMGVPLVSPYCSSKWGIEGLSKSIAKELPNGMT 182

Query: 198 IVALDPGIIHTEMLLSSLG-KIASQYQSPQEWALKAASMILSLTNAENGASLTVEDPGAL 257
           IVALDPGIIHTEMLLSSLG  IASQYQ+PQEWALKAA MIL+LTNAENGASLTV+DPG L
Sbjct: 183 IVALDPGIIHTEMLLSSLGNNIASQYQTPQEWALKAAPMILNLTNAENGASLTVDDPGTL 242

[Close]

BLAST of Cla001906 vs. TrEMBL
Match: A0A0A0KPL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G054570 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85
Identity = 159/236 (67.37%), Postives = 192/236 (81.36%), Query Frame = 1


Query: 23  KKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLLNADV 82
           KK++ITGV +GLGRAL +ELA+ GH II CSR+QTNL+SL+  L NIS  HNHLLLN DV
Sbjct: 2   KKVLITGVGKGLGRALGIELAKFGHIIIGCSRSQTNLNSLKQHLLNIS-SHNHLLLNIDV 61

Query: 83  RSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANILR 142
             DD VKEM   V+EKIG+PDIIVNNA +IN   KIWEI REEFD VID NIKGTAN+LR
Sbjct: 62  SCDDSVKEMTRIVVEKIGIPDIIVNNAGVINKKGKIWEIPREEFDKVIDINIKGTANVLR 121

Query: 143 HFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVALD 202
           HFIPL++P N+GIIVNIS+I    G P+ SPYCSSKW  EGL+KS+AKE+ +GMTIV LD
Sbjct: 122 HFIPLMIPINKGIIVNISAIVATFGVPMASPYCSSKWATEGLSKSVAKEVGDGMTIVTLD 181

Query: 203 PGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTVEDPGALPM 259
           PG+++T+ML + LG  +SQ+Q+PQ+WA KAA MIL+LT  +NGASLTVEDPG LP+
Sbjct: 182 PGVVNTQMLFTLLGNTSSQFQTPQKWATKAAPMILNLTRTDNGASLTVEDPGILPL 236

[Close]

BLAST of Cla001906 vs. TrEMBL
Match: B9SPD4_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.9e-80
Identity = 154/230 (66.96%), Postives = 186/230 (80.87%), Query Frame = 1


Query: 23  KKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHN--HLLLNA 82
           KK++ITGVS+GLGRALALELA+RGHT+I CSR Q  L+SLQ   S +   HN  HLLLNA
Sbjct: 26  KKVMITGVSKGLGRALALELAKRGHTVIGCSRAQDKLNSLQ---SELPSDHNNHHLLLNA 85

Query: 83  DVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANI 142
           DV S+  V+E+   +MEK GVPDIIVNNA  IN N KIWE+  EEFD VIDTN+KG AN+
Sbjct: 86  DVSSNSSVEELAKAIMEKKGVPDIIVNNAGTINKNNKIWEVPVEEFDTVIDTNVKGIANV 145

Query: 143 LRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVA 202
           LRHFIPL+LP  QGIIVN+SS +GR GA LV+PYC+SKW +EG+++S+AKELP+GM +VA
Sbjct: 146 LRHFIPLMLPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGMSRSVAKELPDGMAVVA 205

Query: 203 LDPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTV 251
           L+PG+IHTEML S  G  AS YQ+P  WALKAA+MIL+LT A+NGASLTV
Sbjct: 206 LNPGVIHTEMLQSCFGTSASLYQAPDAWALKAATMILNLTGADNGASLTV 252

[Close]

BLAST of Cla001906 vs. TrEMBL
Match: A0A067LDB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.4e-79
Identity = 151/232 (65.09%), Postives = 186/232 (80.17%), Query Frame = 1


Query: 19  ANESKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLL 78
           ++  K +++TGVS+GLGRALALELA+RGHT+I CSR Q  L+SLQ  L++    H HLLL
Sbjct: 9   SSAGKTVMVTGVSKGLGRALALELAKRGHTVIGCSRAQDKLNSLQSELTSDRNDH-HLLL 68

Query: 79  NADVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTA 138
           N DVRS+  V+E+   VMEK GVPDIIVNNA  IN N K+WE+  EEFD VIDTN+KG A
Sbjct: 69  NVDVRSNSSVEELAKAVMEKKGVPDIIVNNAGTINRNNKLWEVPVEEFDTVIDTNVKGVA 128

Query: 139 NILRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTI 198
           N+LRHFIPL+LP  +GIIVN+SS +GR GA LV+PYC+SKW IEGLT+S+AKELP+GM +
Sbjct: 129 NVLRHFIPLMLPNKRGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPDGMAV 188

Query: 199 VALDPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTV 251
           +AL+PG+IHTEML S  G  AS YQ+P  WA KAA+MIL+LT A+NGASLTV
Sbjct: 189 IALNPGVIHTEMLQSCFGTSASLYQAPDAWASKAATMILNLTGADNGASLTV 239

[Close]

BLAST of Cla001906 vs. TrEMBL
Match: U5GNJ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.2e-79
Identity = 151/229 (65.94%), Postives = 184/229 (80.35%), Query Frame = 1


Query: 22  SKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLLNAD 81
           SKK++ITGV +GLGRALALEL +RGH +I CSR+Q NL+SLQ   S+      HLLL+AD
Sbjct: 27  SKKVMITGVGKGLGRALALELDKRGHIVIGCSRSQDNLNSLQSQFSS----DKHLLLDAD 86

Query: 82  VRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANIL 141
           V+S+  V+E+   V+EK GVPDIIVNNA  IN N KIWE+S EEFD VIDTN+KG AN+L
Sbjct: 87  VKSNSSVEELARVVVEKKGVPDIIVNNAGTINQNKKIWEVSEEEFDSVIDTNVKGIANML 146

Query: 142 RHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVAL 201
           RHFIPL++P  QGIIVN+SS +GR GA LV+PYC+SKW +EGL++S+AKELP GM IVAL
Sbjct: 147 RHFIPLMIPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKELPEGMAIVAL 206

Query: 202 DPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTV 251
           +PG+IHT+ML S  G  AS YQ P  WALKAA+MIL+LT A+NGASLTV
Sbjct: 207 NPGVIHTDMLTSCFGTSASLYQDPDTWALKAATMILNLTEADNGASLTV 251

[Close]

BLAST of Cla001906 vs. NCBI nr
Match: gi|449449088|ref|XP_004142297.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 1.6e-108
Identity = 207/241 (85.89%), Postives = 219/241 (90.87%), Query Frame = 1


Query: 18  EANESKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLL 77
           E N  KKI+ITGVSQGLGRALALELA+RGHTII CSRNQT LD LQ + SNI P +NHLL
Sbjct: 3   EENSGKKILITGVSQGLGRALALELAKRGHTIIGCSRNQTKLDLLQPIFSNIPP-YNHLL 62

Query: 78  LNADVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGT 137
           LN DV+ DDKVKE L  ++EKIGVPDIIVNNAAMIN  AKIWEISREEFDDVIDTNIKGT
Sbjct: 63  LNLDVKLDDKVKETLEIIVEKIGVPDIIVNNAAMINVKAKIWEISREEFDDVIDTNIKGT 122

Query: 138 ANILRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMT 197
           ANILRHFIPLLLPKN+GIIVNISSIFGRMG PLVSPYCSSKWGIEGL+KSIAKELPNGMT
Sbjct: 123 ANILRHFIPLLLPKNKGIIVNISSIFGRMGVPLVSPYCSSKWGIEGLSKSIAKELPNGMT 182

Query: 198 IVALDPGIIHTEMLLSSLG-KIASQYQSPQEWALKAASMILSLTNAENGASLTVEDPGAL 257
           IVALDPGIIHTEMLLSSLG  IASQYQ+PQEWALKAA MIL+LTNAENGASLTV+DPG L
Sbjct: 183 IVALDPGIIHTEMLLSSLGNNIASQYQTPQEWALKAAPMILNLTNAENGASLTVDDPGTL 242

[Close]

BLAST of Cla001906 vs. NCBI nr
Match: gi|778708164|ref|XP_011656134.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 2.5e-85
Identity = 159/236 (67.37%), Postives = 192/236 (81.36%), Query Frame = 1


Query: 23  KKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLLNADV 82
           KK++ITGV +GLGRAL +ELA+ GH II CSR+QTNL+SL+  L NIS  HNHLLLN DV
Sbjct: 2   KKVLITGVGKGLGRALGIELAKFGHIIIGCSRSQTNLNSLKQHLLNIS-SHNHLLLNIDV 61

Query: 83  RSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANILR 142
             DD VKEM   V+EKIG+PDIIVNNA +IN   KIWEI REEFD VID NIKGTAN+LR
Sbjct: 62  SCDDSVKEMTRIVVEKIGIPDIIVNNAGVINKKGKIWEIPREEFDKVIDINIKGTANVLR 121

Query: 143 HFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVALD 202
           HFIPL++P N+GIIVNIS+I    G P+ SPYCSSKW  EGL+KS+AKE+ +GMTIV LD
Sbjct: 122 HFIPLMIPINKGIIVNISAIVATFGVPMASPYCSSKWATEGLSKSVAKEVGDGMTIVTLD 181

Query: 203 PGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTVEDPGALPM 259
           PG+++T+ML + LG  +SQ+Q+PQ+WA KAA MIL+LT  +NGASLTVEDPG LP+
Sbjct: 182 PGVVNTQMLFTLLGNTSSQFQTPQKWATKAAPMILNLTRTDNGASLTVEDPGILPL 236

[Close]

BLAST of Cla001906 vs. NCBI nr
Match: gi|778697976|ref|XP_004149629.2| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 3.2e-85
Identity = 166/254 (65.35%), Postives = 203/254 (79.92%), Query Frame = 1


Query: 6   LMQERDGSREED--EANESKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQ 65
           L++ER+    E   EA  +K IVI+GVS+GLGRALALELA+ GHTII CSR++  LDSLQ
Sbjct: 19  LLEERNEEVGEMIMEAETTKVIVISGVSRGLGRALALELAKLGHTIIGCSRDKIKLDSLQ 78

Query: 66  LLLSNISPQHNHLLLNADVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISR 125
           L LSN SP+ NHLL N DV+S++ ++EM  TV EK G  DIIVNNAA++  N K+WEI  
Sbjct: 79  LQLSNASPR-NHLLFNFDVKSNESIREMAQTVKEKFGSVDIIVNNAAVVAENLKLWEIPN 138

Query: 126 EEFDDVIDTNIKGTANILRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEG 185
           E FDDVIDTN+KG AN+LRHFIPL+LPKN+GIIVN+SS++GR+ A   S YCSSKWGIEG
Sbjct: 139 EIFDDVIDTNMKGVANMLRHFIPLMLPKNKGIIVNVSSLYGRIAAARASAYCSSKWGIEG 198

Query: 186 LTKSIAKELPNGMTIVALDPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAE 245
           L+KS+AKELPNG+TIV LDPGII+T+  ++ LG  ASQYQSPQ WALKAA MIL++T A+
Sbjct: 199 LSKSVAKELPNGLTIVTLDPGIINTDASVTILGHFASQYQSPQLWALKAAPMILNITTAD 258

Query: 246 NGASLTVEDPGALP 258
           NG +L V DPG LP
Sbjct: 259 NGETLIVPDPGVLP 271

[Close]

BLAST of Cla001906 vs. NCBI nr
Match: gi|778697979|ref|XP_011654452.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 2.3e-83
Identity = 165/254 (64.96%), Postives = 202/254 (79.53%), Query Frame = 1


Query: 6   LMQERDGSREED--EANESKKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQ 65
           L++ER+    E   EA  +K IVI+GVS+GLGRALALELA+ GHTII CSR++  LDSLQ
Sbjct: 19  LLEERNEEVGEMIMEAETTKVIVISGVSRGLGRALALELAKLGHTIIGCSRDKIKLDSLQ 78

Query: 66  LLLSNISPQHNHLLLNADVRSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISR 125
           L LSN SP+ NHLL N D +S++ ++EM  TV EK G  DIIVNNAA++  N K+WEI  
Sbjct: 79  LQLSNASPR-NHLLFNFD-KSNESIREMAQTVKEKFGSVDIIVNNAAVVAENLKLWEIPN 138

Query: 126 EEFDDVIDTNIKGTANILRHFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEG 185
           E FDDVIDTN+KG AN+LRHFIPL+LPKN+GIIVN+SS++GR+ A   S YCSSKWGIEG
Sbjct: 139 EIFDDVIDTNMKGVANMLRHFIPLMLPKNKGIIVNVSSLYGRIAAARASAYCSSKWGIEG 198

Query: 186 LTKSIAKELPNGMTIVALDPGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAE 245
           L+KS+AKELPNG+TIV LDPGII+T+  ++ LG  ASQYQSPQ WALKAA MIL++T A+
Sbjct: 199 LSKSVAKELPNGLTIVTLDPGIINTDASVTILGHFASQYQSPQLWALKAAPMILNITTAD 258

Query: 246 NGASLTVEDPGALP 258
           NG +L V DPG LP
Sbjct: 259 NGETLIVPDPGVLP 270

[Close]

BLAST of Cla001906 vs. NCBI nr
Match: gi|659131190|ref|XP_008465557.1| (PREDICTED: zerumbone synthase-like [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 4.0e-83
Identity = 153/236 (64.83%), Postives = 192/236 (81.36%), Query Frame = 1


Query: 23  KKIVITGVSQGLGRALALELARRGHTIIACSRNQTNLDSLQLLLSNISPQHNHLLLNADV 82
           KK++ITGV +GLGRAL +ELA+ GH II CSR+QTNL+SL+  L NISP HNH LLN DV
Sbjct: 2   KKVLITGVGKGLGRALGIELAKFGHIIIGCSRSQTNLNSLKQHLLNISP-HNHCLLNIDV 61

Query: 83  RSDDKVKEMLYTVMEKIGVPDIIVNNAAMINGNAKIWEISREEFDDVIDTNIKGTANILR 142
             DD VKEM   V+++IGVPDIIVNNA +IN   KIWEI +EEF+ VID NIKGTAN+LR
Sbjct: 62  SCDDSVKEMARIVVQQIGVPDIIVNNAGVINKKGKIWEIPKEEFEKVIDINIKGTANVLR 121

Query: 143 HFIPLLLPKNQGIIVNISSIFGRMGAPLVSPYCSSKWGIEGLTKSIAKELPNGMTIVALD 202
           HFIPL++P N+ IIVN+SS+   +G P+ SPYCSSKW +EGL+KS+AKE+ +GMTIV LD
Sbjct: 122 HFIPLMIPINKAIIVNMSSVMATIGVPMASPYCSSKWAMEGLSKSVAKEVGDGMTIVTLD 181

Query: 203 PGIIHTEMLLSSLGKIASQYQSPQEWALKAASMILSLTNAENGASLTVEDPGALPM 259
           PG+++TEML + LG  +SQ+Q+PQ+WA+KAA MIL+LT  +NGASL V DPG LP+
Sbjct: 182 PGVVNTEMLFTLLGNTSSQFQTPQKWAMKAAPMILNLTRTDNGASLMVHDPGILPL 236

The following BLAST results are available for this feature:

BLAST of Cla001906 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTALR_ARATH	2.0e-79	62.45	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P...	[more]
FABG_STAEQ	4.0e-27	35.60	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s...	[more]
FABG_STAES	4.0e-27	35.60	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s...	[more]
FABG_STAAR	7.6e-26	34.55	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]
FABG_STAAW	7.6e-26	34.55	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]

BLAST of Cla001906 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJF0_CUCSA	1.1e-108	85.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1	[more]
A0A0A0KPL3_CUCSA	1.7e-85	67.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G054570 PE=3 SV=1	[more]
B9SPD4_RICCO	2.9e-80	66.96	Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=...	[more]
A0A067LDB8_JATCU	2.4e-79	65.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1	[more]
U5GNJ2_POPTR	3.2e-79	65.94	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1	[more]

BLAST of Cla001906 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449088\|ref\|XP_004142297.1\|	1.6e-108	85.89	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|778708164\|ref\|XP_011656134.1\|	2.5e-85	67.37	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|778697976\|ref\|XP_004149629.2\|	3.2e-85	65.35	PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sa...	[more]
gi\|778697979\|ref\|XP_011654452.1\|	2.3e-83	64.96	PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sa...	[more]
gi\|659131190\|ref\|XP_008465557.1\|	4.0e-83	64.83	PREDICTED: zerumbone synthase-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom
IPR020904	Sc_DH/Rdtase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042967	acyl-carrier-protein biosynthetic process
biological_process	GO:0042335	cuticle development
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006760	folic acid-containing compound metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009409	response to cold
biological_process	GO:0000038	very long-chain fatty acid metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005835	fatty acid synthase complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001906	Cla001906.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 154..162 score: 4.3E-11coord: 100..111 score: 4.3E-11coord: 174..193 score: 4.3
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 100..111 score: 2.5E-24coord: 174..193 score: 2.5E-24coord: 24..41 score: 2.5E-24coord: 194..211 score: 2.5E-24coord: 148..164 score: 2.5
IPR002347	Short-chain dehydrogenase/reductase SDR	PANTHER	PTHR24322	FAMILY NOT NAMED	coord: 27..158 score: 8.7E-74coord: 174..204 score: 8.7
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 23..211 score: 2.3
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 22..248 score: 1.3
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 22..234 score: 2.23
IPR020904	Short-chain dehydrogenase/reductase, conserved site	PROSITE	PS00061	ADH_SHORT	coord: 161..189 scor
None	No IPR available	PANTHER	PTHR24322:SF500	SUBFAMILY NOT NAMED	coord: 27..158 score: 8.7E-74coord: 174..204 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001906	Cla97C11G206530	Watermelon (97103) v2	wmwmbB366
Cla001906	CSPI05G01620	Wild cucumber (PI 183967)	cpiwmB449
Cla001906	Lsi11G000670	Bottle gourd (USVL1VR-Ls)	lsiwmB114
Cla001906	CsGy5G011720	Cucumber (Gy14) v2	cgybwmB408
Cla001906	CsaV3_5G015620	Cucumber (Chinese Long) v3	cucwmB461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001906	Wax gourd	wgowmB351
Cla001906	Wax gourd	wgowmB565
Cla001906	Wax gourd	wgowmB567
Cla001906	Cucurbita maxima (Rimu)	cmawmB735
Cla001906	Cucurbita maxima (Rimu)	cmawmB739
Cla001906	Cucurbita maxima (Rimu)	cmawmB745
Cla001906	Cucurbita moschata (Rifu)	cmowmB733
Cla001906	Wild cucumber (PI 183967)	cpiwmB451
Cla001906	Melon (DHL92) v3.5.1	mewmB080
Cla001906	Watermelon (Charleston Gray)	wcgwmB107
Cla001906	Cucumber (Chinese Long) v2	cuwmB436
Cla001906	Cucumber (Chinese Long) v2	cuwmB438
Cla001906	Cucurbita pepo (Zucchini)	cpewmB455
Cla001906	Bottle gourd (USVL1VR-Ls)	lsiwmB109
Cla001906	Melon (DHL92) v3.6.1	medwmB078
Cla001906	Watermelon (97103) v2	wmwmbB361