Lsi11G000030 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G000030
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPleiotropic drug resistance 9
Locationchr11 : 10887 .. 14684 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAAGCAATTATCTCTCTCTATAGACACTATAGATCATCTATCACAGTCTATCACTGATAGGTACTATAGATTGTCTATCACTGATAGACATGACATTTTGCTACATTTACAAATATTTCCAATAGCTTTGTCATTAAAACAATTATTCTTATTATTTTATTTTTGGTTTAATTGTATTCAATTTAAGTGAAAAAGAGACATGTTTTTTAATTATAAATTTGGTCTCAATGATTTGGAGAAAGTTAAAATTTAATTTCTATAATTTTAGAAATTAGAATTTAGTCTTTATGGTTTGGTAAAACCTTAATTATAAATAATTTCCAAGGTTGTTTTCAAATATAGAAAAATGAGTCAAATTATTTATAAATATAAAAAAATTTCACTGTCTATGAACTATAGACTTCAACTTCTATAGTAGTCTATTGTTGATAGACAGTGAAATTTTTCTATATTTGTAAATAGTTTGATACTTTTTCTATTTATAATAATTTTCCTAATCCCCATTGTCTGATAAAATTTTTATAAAACAGTTCCTACCGTAAACAGTTCCTACCGTAGGGAGTATCTGTAAGAATTTTATTAAAATAGAGAGACTAAATTCTAATTATAAATTATAGAGATTAAATTTTTTTTTTTTAGTATACAAACCAAATTTGTAATTTAACTTTTTTTTAATTTTATATATGAAGGTATTTAAATTTCACTGTACAAGTTTTCTTTTAATTATATTAAATTTGATCGGATGGGGCCAACAATGGAGGGTTGACCAATAAAATAAAACAAAAAAGATTGAATGTCACTTAATTTATATTTTATTTCTCAAACTTTCAACGATTGTTAGATAGAGATTGCCTCAATTTTGATCGACGAGATTGGATAACCACATTGAAATCGTTATAAATTTAGTCATTCATTTTTTTATTTTACTTGTTTTTCTTTTCATTTAGTCTTCTTCGTGAATTATTGTTAGGAGTCATTTGTTTCGTGAGGATCTAAAATTCCTATAGATTGGACATCTAAATTACCATATTTATTTTGTGATAACGTAAGATGTCTTGGTGCACTTACTGATCCCTCATGCTTTGTGAATACTTTTAAAAAAAAAAAAAAGATGCTCAGATATCTAGAGATTCTCAGGTATCCTAGAATATCCACACAGAGGCATCCCAAAGTTGGGATGCGTTCCAGGTAAAATTAATTCCAACTCGTCTCTAACAAGTGTACATTCGAAGTGGATGTTAAGTGTATTAATCTTGGACAGACTTAACGATTTGCACAATCTAGATTGTGTTGGATTTTCTTTTAAGGTAGTGGTATTCTCCGACATAACAATTCATTTTCGGCATCGTTGACGATTAAAATATAGCTACTTCATCTTATTAACTTGGTTTTGCACTTAGCAAAATTGACTCCAAGTATGGGTTGTTCTAAACTAATGGACCATTGTTGGTTTGGTTGGTTAGACTAATTTTAAAGAAATTGGCATACTCTGATGACAAGAAAATACAAATCAGATAATGGACAATCCAAATCAATATTTTGTTAGTCGTATGAATCCATTTCGATTTTTGTTTTTGAAAATTAAGTCTATTTCCTCTCTTTTTTTTTTAACCATAGTTTGCATCTTTCTTAAGTATAAGAATTGAATTCTTAGTCAAATTCCTAAAACAAAAACTACTTGTTTTAGTTTTCAAATTTTGACTTGGTTTTTTCAAAATATTGATAAAAAATAGATAACAAAACAAAAAAAATTTAGAGATGGAGTGGGTGTTTGTATGTGTAATTTTTAAAAACTAGAAATTAACGCCCCGTTTGGTAACAATTTCGTTTTTAGTTTTTGATTTTTGAAAATTAAGCCTATAAATATTTCTTCCACCTCTAAATCTGTTGTTTTAATATCTACTTTTGAAAACTAAAAAAAGTACGTAGTTTTTTTTTAAAAAAAAAAACTTGCTATTTGTTTTTAAAATTTGGTTAAGAATGCAATTCTTCTACTTAAGATTGATACAAAAATAAAAAACGAAATAATTACCTAATAAGATTTAAAAAAATCAAATAGTTATTGAATGAGACGTTAAAATTTAAAATATGAGACACTATGAAATTGTTAATAAAAGGTAATTGTGGTAGGGTTGGTGTGAAATTTCCAACCGTGGAAGTGAAATACAAAAATGTGCATATTGAGGCAGAGTATGAGATTGTTCGTGGGAAAGCCCTTCCAACAGTTTGGAATTCTTTCCAAACCAAGCTTTTTGTAAGTCTATTTTTTTTTTTTTTCTTTTCTTGGATTTCTTTAGTTCTTTTCTATTTGCAATGTAAAAAATAGCTTAAATTAAACGATAAAAGACACTATAATATCCTTTAAAATTATATGATTTCTAGTTTTTTTAATATTACTTTTAAAAGATAATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAACCAATAAGATAGATGGACCTCACAGCTCCGAGAAAAAGCACAACAAAGATAAACCAACTATCCAAAATAATCAAACTACAAAATGACCACACAACCACAGACTAAAACCCCTATTACCAAAATATCTCCAACCTAATTTTTATTCATACTTGTGGTGAAAGGTATGTAACTATGAGCAAGAATAATGAACTAGGATACAAGCTCACTTCTTAGGTTAACCTATCATGCAAAGGCCATACACGAGTGTCATGCCAGCCCTTAGCTACACAGCCAAACCCAAAAAGGAGGAGTCCCTCAACTAGCGTTTAGAAAGAAAAATAGACCAAAAAGACCCCATAACCCGAGGACAAAGCACAAACTCATAAAAACAAACAAACAACGAACCCAAAAACCAAATGGAAGAACACATCCAACAAATGAATCCAAAATAAAGATCCTATAGCCTAGAGACCGAGCACAAACCAAACAAACAAATAAAATTAACACAATAATCATCCTAGCAATTATTGAACTAAAAAAAACTTTATGAATTATAATTTATATTGAATTAGTAATTTTTTATCATCTCAAAAGTTGATAGTTTTATTGATCTCTTACGTTATTTGTTGAACAAAAAAAAATTGTGAGTTCTAATTATATTCACTATGTAATTCTTTAAAATATTACTAATTTTGTAAATTTTGTGGGTAAGTATGAACTTAAATTATTTCAATGCCCCCACACTTGGTTTAAAGATATTTTCCATTGTCGAGATGTGTTATCAATTCATTGAATTGCATATTTGGAAGTCTCTAAATTGCAATAGTTAGTCCAAAATATTACAAAATTCAAAATTTTGCACTTGTTTTATTTAGGACATTATCAAATTTTGTGGTTCGAAGTCTCATGAAGCTAAAATTAACATAATTGAAGATGTGAGTGGTGTCATAAAGCCCGGAAGGTAA

mRNA sequence

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTAATTGTGGTAGGGTTGGTGTGAAATTTCCAACCGTGGAAGTGAAATACAAAAATGTGCATATTGAGGCAGAGTATGAGATTGTTCGTGGGAAAGCCCTTCCAACAGTTTGGAATTCTTTCCAAACCAAGCTTTTTGACATTATCAAATTTTGTGGTTCGAAGTCTCATGAAGCTAAAATTAACATAATTGAAGATGTGAGTGGTGTCATAAAGCCCGGAAGGTAA

Coding sequence (CDS)

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTAATTGTGGTAGGGTTGGTGTGAAATTTCCAACCGTGGAAGTGAAATACAAAAATGTGCATATTGAGGCAGAGTATGAGATTGTTCGTGGGAAAGCCCTTCCAACAGTTTGGAATTCTTTCCAAACCAAGCTTTTTGACATTATCAAATTTTGTGGTTCGAAGTCTCATGAAGCTAAAATTAACATAATTGAAGATGTGAGTGGTGTCATAAAGCCCGGAAGGTAA

Protein sequence

MAPTTEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR
Homology
[Close]
BLAST of Lsi11G000030 vs. Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 73/197 (37.06%), Postives = 105/197 (53.30%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED----ERDTVDASLWAAVE 65
           ++ E + +EL EIGR  S   SFR+  SSFRS+S+   V+ D    + D   A  WA +E
Sbjct: 8   DDIESLRVELAEIGR--SIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIE 67

Query: 66  RLPTLERLRSSLFDDIGGVEVEEKG----NCGRVGVKFPTVEVKYKNVHIEA-------- 125
           RLPT++R+RS+L DD G   + EKG    +  ++G     + ++    HIE         
Sbjct: 68  RLPTVKRMRSTLLDD-GDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKK 127

Query: 126 --------------------------EYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHE 161
                                     E E+V GKALPT+WN+ +  L +++K  G+K+HE
Sbjct: 128 IRRRIDRVGMELPTIEVRYESLKVVAECEVVEGKALPTLWNTAKRVLSELVKLTGAKTHE 187

[Close]
BLAST of Lsi11G000030 vs. Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 46/115 (40.00%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 46  EDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNV 105
           E  +  VD +   A+ER   +E+L   + +D   +  + +    RVGV+FP++EV+Y+++
Sbjct: 52  EKGKKVVDVTKLGAMERHLMIEKLIKHIENDNLKLLKKIRRRMERVGVEFPSIEVRYEHL 111

Query: 106 HIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
            +EA  E+V GKALPT+WNS +    D++K  G +++EA I I+ DVSG+I PGR
Sbjct: 112 GVEAACEVVEGKALPTLWNSLKHVFLDLLKLSGVRTNEANIKILTDVSGIISPGR 166

[Close]
BLAST of Lsi11G000030 vs. Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 70/195 (35.90%), Postives = 100/195 (51.28%), Query Frame = 1 

Query: 5   TEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDER-DTVDASLWAAVERL 64
           ++E E   ++L EIGR  S   SFR Q+SSFRSNSA +   +D+  D  +   WAA+ERL
Sbjct: 7   SDEIESFRMDLAEIGR--SLRSSFRGQSSSFRSNSALSASQKDDAVDEENMLAWAAIERL 66

Query: 65  PTLERLRSSLFDDIGGVEVEEK----GNCGRVGVKFPTVEVKYKNVHIEAE-----YEIV 124
           PT +RLRSSLF++I G +   K     +  ++G     V ++    HIE +     ++I 
Sbjct: 67  PTFDRLRSSLFEEINGNDANVKRKRVTDVTKLGALERHVFIEKMIKHIEHDNLQLLHKIR 126

Query: 125 R-----GKALPTV------------------------WNSFQTKLFDIIKFCGSKSHEAK 161
           +     G  LPTV                        WNS ++   ++ +  G +S  AK
Sbjct: 127 KRIDKVGVELPTVEVRYKNLTIEAECELVHGKPLPTLWNSLKSITMNLARLPGLQSELAK 186

[Close]
BLAST of Lsi11G000030 vs. Swiss-Prot
Match: AB50G_ORYSJ (ABC transporter G family member 50 OS=Oryza sativa subsp. japonica GN=ABCG50 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 1 

Query: 24  FSLSFRQQNSSFRSNSAAAVVDEDERDTV----DASLWAAVERLPTLERLRSSLFDDIGG 83
           F L    Q+   + N+ +A  D+ ER+ +    D+S   A++R    + L  ++ DD   
Sbjct: 26  FELELVVQDVQRQQNNGSANTDQHERENLLLLDDSSKSGALKRRLFFDNLLKNVQDDHIR 85

Query: 84  VEVEEKGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGS 143
               +K    RV VK P +EV+Y N+ +EAE     G  LP++WNS +     ++K  G 
Sbjct: 86  FLHRQKERIDRVDVKLPAIEVRYNNLSVEAECRTANGDHLPSLWNSTKGAFSGLVKLLGL 145

Query: 144 KSHEAKINIIEDVSGVIKPGR 161
           ++  AKIN++EDVSG+IKP R
Sbjct: 146 ETERAKINVLEDVSGIIKPCR 166

[Close]
BLAST of Lsi11G000030 vs. Swiss-Prot
Match: AB49G_ORYSJ (ABC transporter G family member 49 OS=Oryza sativa subsp. japonica GN=ABCG49 PE=2 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = 1 

Query: 15  LPEIGRIRSFSLSFRQQNSSFR--SNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSS 74
           LP   R+R   LS  +   S    S          E + VD     A ER   ++RL + 
Sbjct: 92  LPTADRLRLSLLSSTRGGGSSGDVSEGGGGGAASSELEVVDVRWLGAAERRAVVQRLVAD 151

Query: 75  LFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFD 134
           +  D   +  +++    RVGV+  TVEV++++V +EAE ++V GK LPT+WN+  ++   
Sbjct: 152 VKHDHVRMLRKQRERMERVGVRPATVEVRWRDVCVEAECQVVSGKPLPTLWNAALSRFSL 211

Query: 135 IIKFCGSKSHEAKINIIEDVSGVIKPGR 161
           +    G   H++K+ I+E+VSG+IKP R
Sbjct: 212 LAAKLGFSHHQSKVQILENVSGIIKPSR 239

[Close]
BLAST of Lsi11G000030 vs. TrEMBL
Match: A0A0A0LBH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G814320 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.4e-38
Identity = 104/195 (53.33%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 1   MAPTTEEREPVG-IELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED-ERDTVDASLWA 60
           MAPTTEE EPV  IE+ EIGR          + SSFR+ S     D+D + D  DASLW 
Sbjct: 1   MAPTTEESEPVRMIEVGEIGR----------RTSSFRNGSMTTTEDDDHDGDVGDASLWK 60

Query: 61  AVERLPTLERLR-SSLFDDIGG----VEVEEKGNCGR----------------------- 120
            ++RLPT ERLR S L DD       V+V + G+  R                       
Sbjct: 61  LIDRLPTFERLRWSLLLDDDNSRRKVVDVTKLGDEERHLFIQKLINNVENDNLKLLRKVN 120

Query: 121 -----VGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAK 161
                VGVKFPTVEVKYKNV+IEA+ E+VRGKALPT+WNS QTKLF+I++F G KSHEAK
Sbjct: 121 ERLHKVGVKFPTVEVKYKNVNIEAKCEVVRGKALPTLWNSLQTKLFEIMRFFGVKSHEAK 180

[Close]
BLAST of Lsi11G000030 vs. TrEMBL
Match: A0A0A0KMI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292220 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 95/194 (48.97%), Postives = 112/194 (57.73%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQ---------------------------------- 65
           +EREPV IE+PEI RIRS S SFR+Q                                  
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  -----NSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKG 125
                +S F       V +   R  VD +    VER   ++RL   + +D   +  + K 
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

[Close]
BLAST of Lsi11G000030 vs. TrEMBL
Match: A0A0A0LEL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-27
Identity = 69/135 (51.11%), Postives = 93/135 (68.89%), Query Frame = 1 

Query: 27  SFRQQNSS-FRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEK 86
           +F+Q  SS F   +    V +  R  VD +  +  ER   +++L  ++ DD   +  + +
Sbjct: 31  TFKQLRSSLFDITNDKGEVKKKRRRVVDVTKLSNEERGLFIKKLIKNIEDDNVKLLTKVR 90

Query: 87  GNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAK 146
               RVG KFPTVEVKYKNVHIE E E+V GKA+PT+WNS Q+KL++IIKFCG KS++AK
Sbjct: 91  DRIHRVGEKFPTVEVKYKNVHIEVECEVVHGKAIPTLWNSLQSKLYEIIKFCGVKSNKAK 150

Query: 147 INIIEDVSGVIKPGR 161
           I+IIEDVSG+IKPGR
Sbjct: 151 IDIIEDVSGIIKPGR 165

[Close]
BLAST of Lsi11G000030 vs. TrEMBL
Match: V4U0I0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024261mg PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 80/186 (43.01%), Postives = 101/186 (54.30%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +E E + IEL EIGR  S   SFR   SSFR   A    DEDE D      WAAV+RLPT
Sbjct: 8   DEIESLRIELAEIGR--SIRSSFRSFASSFRG--AIHDNDEDEDDEECDPQWAAVDRLPT 67

Query: 66  LERLRSSLFDDIGGVEVEEKGNCG-------------------------------RVGVK 125
            ER+ ++LFDD  G  + +    G                               RVGV+
Sbjct: 68  FERVTTALFDDKDGKRLVDITKLGAEERHLFIEKLIKHIENDNLRLLHKIRKRFDRVGVQ 127

Query: 126 FPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSG 161
            PTVEV+YKN+ +EAE E+V GK LPT+WN+ ++ L       GSK  EAKI I++DV+G
Sbjct: 128 LPTVEVRYKNLGVEAECEVVHGKPLPTLWNTTKSALSGFPSLFGSK-QEAKIKILKDVNG 187

[Close]
BLAST of Lsi11G000030 vs. TrEMBL
Match: A5AFU8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020606 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-24
Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +E+E +G+EL E+GR  S    F    SSFRS ++ A   +++ D VD   WAA+ERLPT
Sbjct: 8   DEKESLGMELAELGR--SIGSPFHHHTSSFRSRTSDAKSYKEKDDEVDLQ-WAAIERLPT 67

Query: 66  LERLRSSLFDD-------------------IGGVE-----------VEEKGNCGRVGVKF 125
            ER+R+SLF                     +G +E           +EE  +  +VG++F
Sbjct: 68  FERVRTSLFGHHGLNDGKEELGKRVIHVTKLGALECNVFIDKLLKKIEENNH--QVGLEF 127

Query: 126 PTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGV 161
           PTVEV+Y+N+ IEAE E+V G+ LPT+WN+ ++    I  F   KS    I I++DVSG+
Sbjct: 128 PTVEVRYQNLSIEAECEVVHGEPLPTLWNTLKSTFHAIKNFTRCKSQANMIKILKDVSGI 187

[Close]
BLAST of Lsi11G000030 vs. TAIR10
Match: AT3G53480.1 (AT3G53480.1 pleiotropic drug resistance 9)

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24
Identity = 73/197 (37.06%), Postives = 105/197 (53.30%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED----ERDTVDASLWAAVE 65
           ++ E + +EL EIGR  S   SFR+  SSFRS+S+   V+ D    + D   A  WA +E
Sbjct: 8   DDIESLRVELAEIGR--SIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIE 67

Query: 66  RLPTLERLRSSLFDDIGGVEVEEKG----NCGRVGVKFPTVEVKYKNVHIEA-------- 125
           RLPT++R+RS+L DD G   + EKG    +  ++G     + ++    HIE         
Sbjct: 68  RLPTVKRMRSTLLDD-GDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKK 127

Query: 126 --------------------------EYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHE 161
                                     E E+V GKALPT+WN+ +  L +++K  G+K+HE
Sbjct: 128 IRRRIDRVGMELPTIEVRYESLKVVAECEVVEGKALPTLWNTAKRVLSELVKLTGAKTHE 187

[Close]
BLAST of Lsi11G000030 vs. TAIR10
Match: AT2G37280.1 (AT2G37280.1 pleiotropic drug resistance 5)

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-20
Identity = 46/115 (40.00%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 46  EDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNV 105
           E  +  VD +   A+ER   +E+L   + +D   +  + +    RVGV+FP++EV+Y+++
Sbjct: 52  EKGKKVVDVTKLGAMERHLMIEKLIKHIENDNLKLLKKIRRRMERVGVEFPSIEVRYEHL 111

Query: 106 HIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
            +EA  E+V GKALPT+WNS +    D++K  G +++EA I I+ DVSG+I PGR
Sbjct: 112 GVEAACEVVEGKALPTLWNSLKHVFLDLLKLSGVRTNEANIKILTDVSGIISPGR 166

[Close]
BLAST of Lsi11G000030 vs. TAIR10
Match: AT4G15230.1 (AT4G15230.1 pleiotropic drug resistance 2)

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-15
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 1 

Query: 44  VDEDERDTVDASLWAAVERLPTLERLRSSLF--DDIGGV--------------------- 103
           VD++E   +    WA VERLPT +R+ ++L   D++ G                      
Sbjct: 25  VDDEEELRLQ---WATVERLPTFKRVTTALLARDEVSGKGRVIDVTRLEGAERRLLIEML 84

Query: 104 --EVEE---------KGNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTK 161
             ++E+         +    +VG++ PTVEV++ N+ +EAE +++ GK +PT+WN+ +  
Sbjct: 85  VKQIEDDNLRLLRKIRKRIDKVGIELPTVEVRFNNLSVEAECQVIHGKPIPTLWNTIKGL 144

[Close]
BLAST of Lsi11G000030 vs. TAIR10
Match: AT4G15215.1 (AT4G15215.1 pleiotropic drug resistance 13)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14
Identity = 53/176 (30.11%), Postives = 87/176 (49.43%), Query Frame = 1 

Query: 17  EIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLF-- 76
           ++ + +SF + F   N           VD++E+     S WA VERLPT +R+ ++L   
Sbjct: 7   DVDKAKSFQVEFACGNG----------VDDEEKLR---SQWATVERLPTFKRVTTALLHT 66

Query: 77  -----DDIGGVEVEE-------------------------KGNCGRVGVKFPTVEVKYKN 136
                D I   ++E+                         +     VG++ PTVEV++ +
Sbjct: 67  GDDSSDIIDVTKLEDAERRLLIEKLVKQIEADNLRLLRKIRKRIDEVGIELPTVEVRFND 126

Query: 137 VHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
           + +EAE ++V GK +PT+WN+ +  L    KF  SK  E KI I++ VSG+++PGR
Sbjct: 127 LSVEAECQVVHGKPIPTLWNTIKGSL---SKFVCSKK-ETKIGILKGVSGIVRPGR 165

[Close]
BLAST of Lsi11G000030 vs. TAIR10
Match: AT4G15236.1 (AT4G15236.1 ABC-2 and Plant PDR ABC-type transporter family protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 38/113 (33.63%), Postives = 66/113 (58.41%), Query Frame = 1 

Query: 48  ERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGNCGRVGVKFPTVEVKYKNVHI 107
           +R  +D S    ++R   ++ L   + DD   +  + +     VG+  P +EV++ ++ +
Sbjct: 55  QRRVMDVSKLEDLDRRLFIDELIRHVEDDNRVLLQKIRTRTDEVGIDLPKIEVRFSDLFV 114

Query: 108 EAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKINIIEDVSGVIKPGR 161
           EAE E+V GK +PT+WN+  +KL    +F  SK  E KI+I++ VSG+I+P R
Sbjct: 115 EAECEVVHGKPIPTLWNAIASKL---SRFTFSK-QEDKISILKGVSGIIRPKR 163

[Close]
BLAST of Lsi11G000030 vs. NCBI nr
Match: gi|659084931|ref|XP_008443150.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 5.2e-41
Identity = 107/194 (55.15%), Postives = 124/194 (63.92%), Query Frame = 1 

Query: 1   MAPTTEEREPVG-IELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTV-DASLWA 60
           MAPTTEE EPV  IE+ EIGR          + SSFR+ S  A   ED+   V DASLW 
Sbjct: 1   MAPTTEESEPVRMIEVGEIGR----------RASSFRNGSTTAEDQEDDDGHVGDASLWK 60

Query: 61  AVERLPTLERLRSSLFDDIGG----VEVEEKGNCGR------------------------ 120
            ++RLPT ERLR SLF+D  G    V+V + G+  R                        
Sbjct: 61  LIDRLPTFERLRLSLFEDDNGRRKVVDVTKLGDVERHRFIQKLIKNIENDNLKLLRKVNE 120

Query: 121 ----VGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
               VGVKF TVEVKYKNV+IEA+ E+VRGKALPT+WNS QTKLF+IIKFCG+KSHEAKI
Sbjct: 121 RIHKVGVKFSTVEVKYKNVNIEAKCEVVRGKALPTLWNSLQTKLFEIIKFCGAKSHEAKI 180

[Close]
BLAST of Lsi11G000030 vs. NCBI nr
Match: gi|778684995|ref|XP_011652141.1| (PREDICTED: pleiotropic drug resistance protein 3-like [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 9.1e-38
Identity = 104/195 (53.33%), Postives = 121/195 (62.05%), Query Frame = 1 

Query: 1   MAPTTEEREPVG-IELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED-ERDTVDASLWA 60
           MAPTTEE EPV  IE+ EIGR          + SSFR+ S     D+D + D  DASLW 
Sbjct: 1   MAPTTEESEPVRMIEVGEIGR----------RTSSFRNGSMTTTEDDDHDGDVGDASLWK 60

Query: 61  AVERLPTLERLR-SSLFDDIGG----VEVEEKGNCGR----------------------- 120
            ++RLPT ERLR S L DD       V+V + G+  R                       
Sbjct: 61  LIDRLPTFERLRWSLLLDDDNSRRKVVDVTKLGDEERHLFIQKLINNVENDNLKLLRKVN 120

Query: 121 -----VGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAK 161
                VGVKFPTVEVKYKNV+IEA+ E+VRGKALPT+WNS QTKLF+I++F G KSHEAK
Sbjct: 121 ERLHKVGVKFPTVEVKYKNVNIEAKCEVVRGKALPTLWNSLQTKLFEIMRFFGVKSHEAK 180

[Close]
BLAST of Lsi11G000030 vs. NCBI nr
Match: gi|449445399|ref|XP_004140460.1| (PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-36
Identity = 95/194 (48.97%), Postives = 112/194 (57.73%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQ---------------------------------- 65
           +EREPV IE+PEI RIRS S SFR+Q                                  
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  -----NSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKG 125
                +S F       V +   R  VD +    VER   ++RL   + +D   +  + K 
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

[Close]
BLAST of Lsi11G000030 vs. NCBI nr
Match: gi|700195688|gb|KGN50865.1| (hypothetical protein Csa_5G292220 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-36
Identity = 95/194 (48.97%), Postives = 112/194 (57.73%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQ---------------------------------- 65
           +EREPV IE+PEI RIRS S SFR+Q                                  
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  -----NSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKG 125
                +S F       V +   R  VD +    VER   ++RL   + +D   +  + K 
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 NCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAKI 161
              +VGVKFPTVEVKYKNVHIEAEYEIVRGKALPT+WNSFQ+ LFDI+K CGSKSHEAK 
Sbjct: 122 RIHKVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTLWNSFQSNLFDIMKLCGSKSHEAKT 181

[Close]
BLAST of Lsi11G000030 vs. NCBI nr
Match: gi|659114007|ref|XP_008456863.1| (PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 3.8e-36
Identity = 97/195 (49.74%), Postives = 114/195 (58.46%), Query Frame = 1 

Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQ---------------------------------- 65
           +EREPV IE+ EI RIRS S SFR+Q                                  
Sbjct: 2   DEREPVRIEVSEIRRIRSLSSSFRRQTLSFRSSSAASVEEEHERDTIDPSLWATVERLPT 61

Query: 66  ----NSSFRSNSAAAVVDEDE--RDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEK 125
                SS   +     VD++   R  VD +    VER   ++RL   + +D   +  + +
Sbjct: 62  FERLRSSLFEDVRGVEVDQENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIR 121

Query: 126 GNCGRVGVKFPTVEVKYKNVHIEAEYEIVRGKALPTVWNSFQTKLFDIIKFCGSKSHEAK 161
               +VGVKFPTVEVKYKNVHI+AEYEIVRGKALPT+WNSFQTK FDIIK CGSKSHEAK
Sbjct: 122 ERIHKVGVKFPTVEVKYKNVHIQAEYEIVRGKALPTLWNSFQTKFFDIIKLCGSKSHEAK 181

The following BLAST results are available for this feature:
BLAST of Lsi11G000030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AB37G_ARATH3.7e-2337.06ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1[more]
AB33G_ARATH1.2e-1840.00ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1[more]
PDR3_TOBAC1.1e-1735.90Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1[more]
AB50G_ORYSJ1.2e-1634.75ABC transporter G family member 50 OS=Oryza sativa subsp. japonica GN=ABCG50 PE=... [more]
AB49G_ORYSJ1.1e-1433.11ABC transporter G family member 49 OS=Oryza sativa subsp. japonica GN=ABCG49 PE=... [more]
BLAST of Lsi11G000030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBH1_CUCSA6.4e-3853.33Uncharacterized protein OS=Cucumis sativus GN=Csa_3G814320 PE=3 SV=1[more]
A0A0A0KMI3_CUCSA1.2e-3648.97Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292220 PE=3 SV=1[more]
A0A0A0LEL9_CUCSA3.9e-2751.11Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1[more]
V4U0I0_9ROSI1.4e-2443.01Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024261mg PE=3 SV=1[more]
A5AFU8_VITVI4.0e-2439.46Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020606 PE=4 SV=1[more]
BLAST of Lsi11G000030 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53480.12.1e-2437.06 pleiotropic drug resistance 9[more]
AT2G37280.17.0e-2040.00 pleiotropic drug resistance 5[more]
AT4G15230.13.0e-1531.13 pleiotropic drug resistance 2[more]
AT4G15215.11.2e-1430.11 pleiotropic drug resistance 13[more]
AT4G15236.14.1e-1233.63 ABC-2 and Plant PDR ABC-type transporter family protein[more]
BLAST of Lsi11G000030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084931|ref|XP_008443150.1|5.2e-4155.15PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo][more]
gi|778684995|ref|XP_011652141.1|9.1e-3853.33PREDICTED: pleiotropic drug resistance protein 3-like [Cucumis sativus][more]
gi|449445399|ref|XP_004140460.1|1.7e-3648.97PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus][more]
gi|700195688|gb|KGN50865.1|1.7e-3648.97hypothetical protein Csa_5G292220 [Cucumis sativus][more]
gi|659114007|ref|XP_008456863.1|3.8e-3649.74PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like [Cucu... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G000030.1Lsi11G000030.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G000030MELO3C020048Melon (DHL92) v3.5.1lsimeB084
Lsi11G000030Cla97C11G207470Watermelon (97103) v2lsiwmbB079
Lsi11G000030Bhi07G000137Wax gourdlsiwgoB135
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G000030Wild cucumber (PI 183967)cpilsiB337
Lsi11G000030Watermelon (Charleston Gray)lsiwcgB084
Lsi11G000030Watermelon (97103) v1lsiwmB109
Lsi11G000030Cucumber (Gy14) v2cgyblsiB311
Lsi11G000030Cucumber (Chinese Long) v3cuclsiB363