Lsi10G009170 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G009170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	tetratricopeptide repeat (TPR)-containing protein
Location	chr10 : 13645548 .. 13648757 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGATTTTGTTATTTAGGACCAAAGAAATTCCAAGAGGGAAGAGCAGAGAAGGAAGGCTGAGTCCAATCTCACAGAAATGCATTTACCTCCGACTCCAATTCTCCTCTGAGCTGAAGAATTTTGATTTCTTCCACAATGTCTTTAGCTCCCCATTATCTGTATTCTTCCCATTCACTTCCCAAATTTTGCCCTCCTAACCATTCCTCTTCCTTCACTCTATGCTCTCAATCCCATCCCAAACTCTTTCCCTCCAATTCTCTCTTTCATCTCGCTTTTTCAACCCCTAATTCCCTTAAACCCTCACCTTTCATCCTTAGAGCATCCGATACAGAATCCAAAAGCGACACTGGACTCGGTGATTCAGATGATGCAAACCAACCTTATGAAGAGTATGAAGTGGAGTTGCTGCAGCCGTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTTTTGCCGACAAAACTGGATTGTTCACCGTTGGGGATAAAGTTATTGCTACTAGGTTATTCTTTACCTACTACTCTCTTTTCTTTTCAGTTCAACCTCTGCTCCCTAAATCTTCCCCACTATGTTCATCAACAAATTCACCTCTATATTTATTTGAATTGTGAAATCAAAACTATAGGATCTGCCTTGCTTCTTCATTTCACACGTGCATTATCTGTACTACTTTCCAGAATGGTGTATGCAGGGTTAATGCATAACATTTGCTTAGTACTCTAAGATTACATCAAACCTTTGGGTTATGGTTGCTATTTTCAAAATTTCTTATGAAACTAAAAGGTTATTTTGACGTTGAAATTATCACAAACTAGAAAGGCTTAAGCTGATAGGTTACAATATTACAAGTAATTCATACCCTTGACGCTAATGTCAAAGTTGAATGATACTTCAAAATTTTCCTCTTGTTGATTTGTGTATTCATCCTAATGGAAGTTAAATGGAGAAAAGAAAAAGAAAAGTTCTAGGCTTCTTAAATCTGCCATGTGTTTATTCCATAGGCTTAAGTGAAGGGTGAATTAGAATGCCGTGTGCTCATAACTTCTGTCTTCTTCTTGTTGTTGCGTGGTGTATTTTTGTTTCCAAAGAAAGTTAAAAGGAGAAAAGAAAAAGAAAAGATATAGTTTTCATGATTTCTACATATCTCCAACAAACATGACTTAGCCTAGTATGAAAAAAATGTGTGAAGAAAAGTCCTAGCAGAAACATTTGCAGCTTTTCTTACATTGGTTAGGATATAATAAACAAAATAGTTACATCAATGCAGTGCAGTATTTGGGACAGAAATATGGCCTGCTGCTGAATACGGAAGGACAATGTACACAATTCGACAAAGAATTGGTCCATTACTCATGAGAATGCAGAAGAGATATGGTTAGTAATCAATCACACTCGACACATGAATAACGAATACCAAATCAAAATGAATGATGACCAGATTTATTATCTTAAATTGGCTGAAAACCTGTATATATCGGAGTTCGCTAATAAACATAATACTCTTAACATCTTCCATGAATTGTTTGTGATTGTTTTTCCAGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCAGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAATGTTTTCTAATAGCTAATGATATCCTATTGAAGCAAGTAACAGCTCCGTTCTCTTTCCTCATTTCTGGGAGTTTTTTCCAAGCTTGGCAAGTAGGTATTGTGCAATACTTCACAGTTCGCAGGATGTCACTAGGGACTTATCTGAAAAAATAGGACCTGCAAAAGATTGATCTAGCATTTAAAAAGTCTACTAAATTGTTAACATATTATTGATCTAATTGTTACAGTTGCAAAATGCCTTAAGGTTGAAGGAGCAGAAAGCACGTAGAGAAAATGACCTACGCCAAGGACTGCGTCTGTATAAGTATGTGCTGCATAACCAACCTGTCCTCTCCTCGTATTGTTTACTTTTGAAGTGCAGACACATCAATGCCCCAACCTATCTTTCTTTCTGTTTTTTCCTCTCCAGGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTTCAGACGAAGCTTCTGTTGCCAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGGTAATGCTTTTGCTTTAACGTAGAATTCTTTGCAACAATAACTAAAATTGCAATCTCATGTTCAGTATGAAACTTCGGCTTAGATTGAGATTGTTGTAGCTTATAAAAATAATAGTTGGCGGCTGTTCATTTAGAAAAATAGTTGTGAAATGAAATAAAAATAGTATTTGACATATTTTCAATTTTAAATAAGAAAAAAACAGTTAGGGTTTAGTAAATGAAAATATTATATTAGCGTAATTTAGTAATAAGAACCAAAGTAGGCTTATTATTTCAAAGTACGCTATGTTTACCGTACTTTCTATAGACACATTTGTCTGTTTACAGTTTCCATCTTCCTGGACAAAATCACACCAAATGGGGATAACTGATTAGTGCCCCTATATAATTTTCGAACAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGGTAACAGTCACTTCAAGTTTTGATATTCAAATAAAATATTACTTGCCCTCGAGAATATATGTGGAAGTTGTGAACATATTACTCGTATGTTTGTCAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGACCTTGGAGGAATTTGAGCCTCTCGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCGATCAATGCCATCAAGTCGCTATTCGGCTTCAAAAAATGAAAACCAGATTCTTCTACAGTCATCTTTTATTAAATAATTCACATTCTTGTTGTCACATCTTGTATAAAAGTATTCAGAGCTTCTAGCTTTTAGATCAGTAACAAAAGAATTTCAATGGAATTTGTTCCCATAAAAATCTTTATTTATGCATATTAGTGTTATACACAATAAACCTATGTTGAGGAAACCTGCTTATGTTCAATTAATTCAGAGATGGTCAGTGTGGAAGCTGAAACTTGATTCCAAGTTCAAGTTATAAAAGTTATTGTTAAACTGCAGCAACTAAAAGAGATTCTGGGGGTGCAAG

mRNA sequence

ATCCGATTTTGTTATTTAGGACCAAAGAAATTCCAAGAGGGAAGAGCAGAGAAGGAAGGCTGAGTCCAATCTCACAGAAATGCATTTACCTCCGACTCCAATTCTCCTCTGAGCTGAAGAATTTTGATTTCTTCCACAATGTCTTTAGCTCCCCATTATCTGTATTCTTCCCATTCACTTCCCAAATTTTGCCCTCCTAACCATTCCTCTTCCTTCACTCTATGCTCTCAATCCCATCCCAAACTCTTTCCCTCCAATTCTCTCTTTCATCTCGCTTTTTCAACCCCTAATTCCCTTAAACCCTCACCTTTCATCCTTAGAGCATCCGATACAGAATCCAAAAGCGACACTGGACTCGGTGATTCAGATGATGCAAACCAACCTTATGAAGAGTATGAAGTGGAGTTGCTGCAGCCGTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTTTTGCCGACAAAACTGGATTGTTCACCGTTGGGGATAAAGTTATTGCTACTAGTGCAGTATTTGGGACAGAAATATGGCCTGCTGCTGAATACGGAAGGACAATGTACACAATTCGACAAAGAATTGGTCCATTACTCATGAGAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCAGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTAAGGTTGAAGGAGCAGAAAGCACGTAGAGAAAATGACCTACGCCAAGGACTGCGTCTGTATAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTTCAGACGAAGCTTCTGTTGCCAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGACCTTGGAGGAATTTGAGCCTCTCGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCGATCAATGCCATCAAGTCGCTATTCGGCTTCAAAAAATGAAAACCAGATTCTTCTACAGTCATCTTTTATTAAATAATTCACATTCTTGTTGTCACATCTTGTATAAAAGTATTCAGAGCTTCTAGCTTTTAGATCAGTAACAAAAGAATTTCAATGGAATTTGTTCCCATAAAAATCTTTATTTATGCATATTAGTGTTATACACAATAAACCTATGTTGAGGAAACCTGCTTATGTTCAATTAATTCAGAGATGGTCAGTGTGGAAGCTGAAACTTGATTCCAAGTTCAAGTTATAAAAGTTATTGTTAAACTGCAGCAACTAAAAGAGATTCTGGGGGTGCAAG

Coding sequence (CDS)

ATGTCTTTAGCTCCCCATTATCTGTATTCTTCCCATTCACTTCCCAAATTTTGCCCTCCTAACCATTCCTCTTCCTTCACTCTATGCTCTCAATCCCATCCCAAACTCTTTCCCTCCAATTCTCTCTTTCATCTCGCTTTTTCAACCCCTAATTCCCTTAAACCCTCACCTTTCATCCTTAGAGCATCCGATACAGAATCCAAAAGCGACACTGGACTCGGTGATTCAGATGATGCAAACCAACCTTATGAAGAGTATGAAGTGGAGTTGCTGCAGCCGTATGGTTTGAAATTCGCCAAGGGCCGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTTTTGCCGACAAAACTGGATTGTTCACCGTTGGGGATAAAGTTATTGCTACTAGTGCAGTATTTGGGACAGAAATATGGCCTGCTGCTGAATACGGAAGGACAATGTACACAATTCGACAAAGAATTGGTCCATTACTCATGAGAATGCAGAAGAGATATGGAAAAACAGATAGTTTCGGTGAGTTAACGGAAAAGGAGATAATCAGAGCAGAAAGAAACTCAGGCGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTAAGGTTGAAGGAGCAGAAAGCACGTAGAGAAAATGACCTACGCCAAGGACTGCGTCTGTATAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTTCAGACGAAGCTTCTGTTGCCAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTAAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGAGAGTTCGGACGGATCCTGATCTATCAAACCTAAGGACCTTGGAGGAATTTGAGCCTCTCGTGAAAAGGTTTGACGAATCATTTATCAATGAGAATGCGATCAATGCCATCAAGTCGCTATTCGGCTTCAAAAAATGA

Protein sequence

MSLAPHYLYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLFHLAFSTPNSLKPSPFILRASDTESKSDTGLGDSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFKK

Homology

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BLAST of Lsi10G009170 vs. Swiss-Prot
Match: LPA1_ARATH (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-07
Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 1


Query: 221 GLRLYKNAKYEEALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEA 280
           GL L+K  + ++AL +FE+ L   P   E+  A YN ACC++   + K  +  L  AL  
Sbjct: 82  GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141

Query: 281 GFEDFKRVRTDPDLSNLRTLEEFEPL 307
               F  +  DPDL++ R L EF+ L
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKEL 167

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BLAST of Lsi10G009170 vs. TrEMBL
Match: A0A0A0KWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 2.0e-158
Identity = 304/337 (90.21%), Postives = 312/337 (92.58%), Query Frame = 1


Query: 1   MSLAPHYLYSSHSLPKFCPPNHSSS----FTLCSQSH--PKLFPSNSLFHLAFSTPNSLK 60
           MSLAP YLYSSH LPK CPPNHSSS    F LCSQSH  PKL  S+  F  +FST +SLK
Sbjct: 5   MSLAPPYLYSSHLLPKICPPNHSSSSSSSFILCSQSHSHPKL--SHLPFSTSFSTSHSLK 64

Query: 61  PSPFILRASDTESKSDTGLGDSDDANQ-PYEEYEVELLQPYGLKFAKGRDGGTYIDAIAP 120
            SPFILRASDTESK+DT   DSDD NQ PYEEYEVEL QPYGLKFAKGRDGGTYIDAIAP
Sbjct: 65  HSPFILRASDTESKTDT---DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAP 124

Query: 121 GGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDS 180
           GGFADKTGLFTVGDKV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGKTDS
Sbjct: 125 GGFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDS 184

Query: 181 FGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEA 240
           FGELTEKEIIRAERNSGVVSNKVREIQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEA
Sbjct: 185 FGELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKYEEA 244

Query: 241 LEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPD 300
           LEKFESVLGSKPT DEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPD
Sbjct: 245 LEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPD 304

Query: 301 LSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 331
           LSN+RTLEEFEPLVKRFDESFINENAINAIKSLFGFK
Sbjct: 305 LSNIRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 336

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BLAST of Lsi10G009170 vs. TrEMBL
Match: B9SBN8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 7.1e-124
Identity = 247/339 (72.86%), Postives = 282/339 (83.19%), Query Frame = 1


Query: 1   MSLAPHY---LYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLF--HLAFSTPNSLKP 60
           MSLAP     LY+S  LP+      +    + SQ++P    + S F    +FS+ + LKP
Sbjct: 1   MSLAPSSYASLYTSPPLPRTITIKQNP--LIFSQNNPFFSKNCSFFTTSTSFSSTHLLKP 60

Query: 61  SPFILRASDTESK---SDTGLGDSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIA 120
           S   ++AS+TESK   S++G  + +   Q YEEYEVELLQPYG+KFAKGRDG TYIDAIA
Sbjct: 61  SNLTVKASETESKASKSESGSTEGEGEEQ-YEEYEVELLQPYGIKFAKGRDGATYIDAIA 120

Query: 121 PGGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTD 180
           PGG ADKTG+FTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM++QKRYGKTD
Sbjct: 121 PGGAADKTGMFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKLQKRYGKTD 180

Query: 181 SFGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEE 240
             GE+TEKEIIRAERNSG +S++VREIQ+QN LR KEQKA+RE DLR GL LYKNAKYEE
Sbjct: 181 YAGEMTEKEIIRAERNSGFISDRVREIQMQNYLRKKEQKAQREKDLRDGLILYKNAKYEE 240

Query: 241 ALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDP 300
           ALE+FESVLGSKP  +EASVASYNVACCYS+LNQLKAGLSAL+DA+EAGFEDFKR+RTDP
Sbjct: 241 ALERFESVLGSKPDPNEASVASYNVACCYSKLNQLKAGLSALKDAMEAGFEDFKRIRTDP 300

Query: 301 DLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
           DL+NLRT EEFEPL+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 DLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 336

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BLAST of Lsi10G009170 vs. TrEMBL
Match: A0A067K3A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 6.6e-122
Identity = 243/332 (73.19%), Postives = 274/332 (82.53%), Query Frame = 1


Query: 8   LYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLFHLAFSTPNS--LKPSPFILRASDT 67
           LYSS   P+     +  +  +  Q++  L  + S F  + S  N+  LK S   + AS+T
Sbjct: 11  LYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNSNLTVNASET 70

Query: 68  ESKSD-TGLG-----DSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIAPGGFADK 127
           ESK+  +G G     +  +  + YEEYEVE+ QPYGLKFAKGRDGGTYIDAIAPGG ADK
Sbjct: 71  ESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK 130

Query: 128 TGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDSFGELTE 187
           TGLF+VGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGK D  GELTE
Sbjct: 131 TGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLDYAGELTE 190

Query: 188 KEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFES 247
           KEIIRAERNSGVVSN+VREIQ+QN LR KEQKA+RENDLR+GL+LYK AKYEEALEKFES
Sbjct: 191 KEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQRENDLREGLQLYKAAKYEEALEKFES 250

Query: 248 VLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRT 307
           VLGSKP   EA+VASYNVACCYS+LNQLKAGLSALEDA++AGFEDFKR+RTDPDL+NLRT
Sbjct: 251 VLGSKPEPMEAAVASYNVACCYSKLNQLKAGLSALEDAMQAGFEDFKRIRTDPDLANLRT 310

Query: 308 LEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
            EEFEPL+KRFDESFINENAINAIKSLFGF K
Sbjct: 311 SEEFEPLLKRFDESFINENAINAIKSLFGFNK 342

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BLAST of Lsi10G009170 vs. TrEMBL
Match: B9GXY1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s20890g PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.8e-119
Identity = 243/352 (69.03%), Postives = 275/352 (78.12%), Query Frame = 1


Query: 1   MSLAPHY---LYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLF----------HLAF 60
           MSLAP     LYSS  LP         + ++ ++  P LF  N+ F            AF
Sbjct: 1   MSLAPSRYPALYSSSPLP---------TSSVQAKQIPLLFSQNTHFLSKNYSFLSTSTAF 60

Query: 61  STPNSLKPSPFILRASDTESKSDT-------GLGDSD-DANQPYEEYEVELLQPYGLKFA 120
           S    LKPS  IL+AS+TES++         G G+ + +  + YEEYEVE+ QPYG+KFA
Sbjct: 61  SNTLLLKPSNSILKASETESQTSKSAESGSGGEGEGEGEGEEKYEEYEVEIEQPYGIKFA 120

Query: 121 KGRDGGTYIDAIAPGGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGP 180
           KGRDG TYIDAIAPGG ADK G F+VGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGP
Sbjct: 121 KGRDGSTYIDAIAPGGSADKNGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGP 180

Query: 181 LLMRMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLR 240
           L M+MQKRYG  D  GELTEKEIIRAERNSGV+SN+VREIQ+QN LR KEQK +RE DLR
Sbjct: 181 LFMKMQKRYGNMDYTGELTEKEIIRAERNSGVISNRVREIQMQNYLRKKEQKEQREKDLR 240

Query: 241 QGLRLYKNAKYEEALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALE 300
           +GL+LYKNAKYEEALEKFES+LGSKP   EA+VASYNVACCYS+LNQL+AGLSALEDA++
Sbjct: 241 EGLQLYKNAKYEEALEKFESMLGSKPDPTEAAVASYNVACCYSKLNQLQAGLSALEDAMK 300

Query: 301 AGFEDFKRVRTDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
           AGFEDFKR+RTDPDLSNLRT E FEPL+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 AGFEDFKRIRTDPDLSNLRTAEGFEPLMKRFDESFINENAINAIKSLFGFNK 343

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BLAST of Lsi10G009170 vs. TrEMBL
Match: W9SBD7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019127 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.4e-118
Identity = 241/347 (69.45%), Postives = 275/347 (79.25%), Query Frame = 1


Query: 1   MSLAPH-----YLYSSHSLPKFCPPNH-------SSSFTLCSQSHPKLFPSNSLF---HL 60
           MSLAP       LY S  L K  P          SSSF   ++S    F SN  F     
Sbjct: 1   MSLAPTPSSNLSLYCSPPLAKTVPTLRRYNIFATSSSFFHINKSFS--FKSNDSFLRNSR 60

Query: 61  AFSTPNSLKPSPFILRASDTESKS-DTGLGDSDDANQPYEEYEVELLQPYGLKFAKGRDG 120
            FS     KPS  I RAS+T++++ ++  G+     + YEEYEVE+ QPYGLKFAKGRDG
Sbjct: 61  FFSNTRLEKPSVLIARASETDAQTAESKGGEGGGGEEQYEEYEVEIEQPYGLKFAKGRDG 120

Query: 121 GTYIDAIAPGGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRM 180
           GTYIDAIAPGG AD+TG FTVGD+V+ATSAVFG EIWPAAEYGRTMYT+RQRIGPLLM+M
Sbjct: 121 GTYIDAIAPGGSADETGKFTVGDRVLATSAVFGDEIWPAAEYGRTMYTMRQRIGPLLMKM 180

Query: 181 QKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRL 240
           QKRYGK D  GELTEKEIIRAERN+G +SN+VREIQ+QN LR KEQK +RE DLR+GL+L
Sbjct: 181 QKRYGKKDDGGELTEKEIIRAERNAGFISNRVREIQMQNYLRKKEQKEQREKDLREGLQL 240

Query: 241 YKNAKYEEALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFED 300
           YKNAKYEEALEKFESVLGS+P  +E+SVASYNVACCYS+LNQL+AG+SALEDAL+AGFED
Sbjct: 241 YKNAKYEEALEKFESVLGSRPDLNESSVASYNVACCYSKLNQLQAGISALEDALKAGFED 300

Query: 301 FKRVRTDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
           FKR+RTDPDL+NLRT EEFEPL+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 FKRIRTDPDLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 345

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BLAST of Lsi10G009170 vs. TAIR10
Match: AT1G55480.1 (AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region)

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-113
Identity = 220/336 (65.48%), Postives = 263/336 (78.27%), Query Frame = 1


Query: 1   MSLAPHY---LYSSHSLPKFCPPNHSSSFTLCSQ--SHPKLFPSNSLFHLAFSTPNSLKP 60
           MSLAP     LYSS SLP+      + S    S   S   LF S++   L     +  K 
Sbjct: 1   MSLAPSSYPSLYSSPSLPRTQQTKQNPSLITQSSFISAKSLFLSSNSASLC--NTHVAKR 60

Query: 61  SPFILRASDTESKSDTGLGDSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIAPGG 120
               L+AS+TES +    G   +  + YE YE+E+ QPYGLKF KGRDGGTYIDAI PGG
Sbjct: 61  RNLALKASETESSAKAEAGGDGEEEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPGG 120

Query: 121 FADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDSFG 180
            ADKTG FTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KR GK +  G
Sbjct: 121 SADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDTG 180

Query: 181 ELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALE 240
           ELTEKEIIRAERN+G +S+++REIQ+QN L+ KEQKA+RE DLR+GL+  KN KYEEALE
Sbjct: 181 ELTEKEIIRAERNAGYISSRLREIQMQNYLKKKEQKAQREKDLREGLQFSKNGKYEEALE 240

Query: 241 KFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLS 300
           +FESVLGSKPT +EASVASYNVACCYS+LNQ++AGLSALE+AL++G+EDFKR+R+DPDL 
Sbjct: 241 RFESVLGSKPTPEEASVASYNVACCYSKLNQVQAGLSALEEALKSGYEDFKRIRSDPDLE 300

Query: 301 NLRTLEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
            LR  ++F+PL+K+FDESFINE+AINAIKSLFGF K
Sbjct: 301 TLRKSKDFDPLLKQFDESFINESAINAIKSLFGFNK 334

[Close]

BLAST of Lsi10G009170 vs. TAIR10
Match: AT1G02910.1 (AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08
Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 1


Query: 221 GLRLYKNAKYEEALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEA 280
           GL L+K  + ++AL +FE+ L   P   E+  A YN ACC++   + K  +  L  AL  
Sbjct: 82  GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141

Query: 281 GFEDFKRVRTDPDLSNLRTLEEFEPL 307
               F  +  DPDL++ R L EF+ L
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKEL 167

[Close]

BLAST of Lsi10G009170 vs. TAIR10
Match: AT5G17170.1 (AT5G17170.1 rubredoxin family protein)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1


Query: 87  EVELLQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDKVIATSAVFGTEIWPAAEY 146
           EVE+ +P GL   + + GG  I  +  GG A K GL + GD+V+ TS+ FG E+WPA + 
Sbjct: 87  EVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKL 146

Query: 147 GRTMYTIRQR 157
           G T   I+ +
Sbjct: 147 GFTKTAIQAK 155

[Close]

BLAST of Lsi10G009170 vs. NCBI nr
Match: gi|449463844|ref|XP_004149641.1| (PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus])

HSP 1 Score: 566.6 bits (1459), Expect = 2.8e-158
Identity = 304/337 (90.21%), Postives = 312/337 (92.58%), Query Frame = 1


Query: 1   MSLAPHYLYSSHSLPKFCPPNHSSS----FTLCSQSH--PKLFPSNSLFHLAFSTPNSLK 60
           MSLAP YLYSSH LPK CPPNHSSS    F LCSQSH  PKL  S+  F  +FST +SLK
Sbjct: 5   MSLAPPYLYSSHLLPKICPPNHSSSSSSSFILCSQSHSHPKL--SHLPFSTSFSTSHSLK 64

Query: 61  PSPFILRASDTESKSDTGLGDSDDANQ-PYEEYEVELLQPYGLKFAKGRDGGTYIDAIAP 120
            SPFILRASDTESK+DT   DSDD NQ PYEEYEVEL QPYGLKFAKGRDGGTYIDAIAP
Sbjct: 65  HSPFILRASDTESKTDT---DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAP 124

Query: 121 GGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDS 180
           GGFADKTGLFTVGDKV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGKTDS
Sbjct: 125 GGFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDS 184

Query: 181 FGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEA 240
           FGELTEKEIIRAERNSGVVSNKVREIQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEA
Sbjct: 185 FGELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKYEEA 244

Query: 241 LEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPD 300
           LEKFESVLGSKPT DEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPD
Sbjct: 245 LEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPD 304

Query: 301 LSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 331
           LSN+RTLEEFEPLVKRFDESFINENAINAIKSLFGFK
Sbjct: 305 LSNIRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 336

[Close]

BLAST of Lsi10G009170 vs. NCBI nr
Match: gi|659097949|ref|XP_008449894.1| (PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo])

HSP 1 Score: 563.5 bits (1451), Expect = 2.4e-157
Identity = 302/335 (90.15%), Postives = 310/335 (92.54%), Query Frame = 1


Query: 1   MSLAPHYLYSSHSLPKFCPPNHSSS--FTLCSQSH--PKLFPSNSLFHLAFSTPNSLKPS 60
           MSLAPHYLYSS  LPK CPPNHSSS  F LCSQSH  PKL  S+  F  +FST +SLK S
Sbjct: 5   MSLAPHYLYSSRLLPKICPPNHSSSSSFILCSQSHSHPKL--SHPPFSTSFSTSHSLKHS 64

Query: 61  PFILRASDTESKSDTGLGDSDDANQ-PYEEYEVELLQPYGLKFAKGRDGGTYIDAIAPGG 120
           PFILRASDTESK+DT   DSDD NQ PYEEYEVEL QPYGLKFAKGRDGGTYIDAIAPGG
Sbjct: 65  PFILRASDTESKTDT---DSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGG 124

Query: 121 FADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDSFG 180
           FADKTGLFTVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MQKRYGKTDSFG
Sbjct: 125 FADKTGLFTVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFG 184

Query: 181 ELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALE 240
           ELTEKEIIRAERNSGVVSNKVREIQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEALE
Sbjct: 185 ELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKYEEALE 244

Query: 241 KFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLS 300
           KFESVLGSKPT DEASVASYNVACCYSQLNQLKAGLSALEDAL AGFEDFKRVRTDPDLS
Sbjct: 245 KFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALGAGFEDFKRVRTDPDLS 304

Query: 301 NLRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 331
           NLR LEEFEPLVKRFDESFINENAINAIKSLFGFK
Sbjct: 305 NLRALEEFEPLVKRFDESFINENAINAIKSLFGFK 334

[Close]

BLAST of Lsi10G009170 vs. NCBI nr
Match: gi|255564826|ref|XP_002523407.1| (PREDICTED: uncharacterized protein LOC8282165 [Ricinus communis])

HSP 1 Score: 451.8 bits (1161), Expect = 1.0e-123
Identity = 247/339 (72.86%), Postives = 282/339 (83.19%), Query Frame = 1


Query: 1   MSLAPHY---LYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLF--HLAFSTPNSLKP 60
           MSLAP     LY+S  LP+      +    + SQ++P    + S F    +FS+ + LKP
Sbjct: 1   MSLAPSSYASLYTSPPLPRTITIKQNP--LIFSQNNPFFSKNCSFFTTSTSFSSTHLLKP 60

Query: 61  SPFILRASDTESK---SDTGLGDSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIA 120
           S   ++AS+TESK   S++G  + +   Q YEEYEVELLQPYG+KFAKGRDG TYIDAIA
Sbjct: 61  SNLTVKASETESKASKSESGSTEGEGEEQ-YEEYEVELLQPYGIKFAKGRDGATYIDAIA 120

Query: 121 PGGFADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTD 180
           PGG ADKTG+FTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM++QKRYGKTD
Sbjct: 121 PGGAADKTGMFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKLQKRYGKTD 180

Query: 181 SFGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEE 240
             GE+TEKEIIRAERNSG +S++VREIQ+QN LR KEQKA+RE DLR GL LYKNAKYEE
Sbjct: 181 YAGEMTEKEIIRAERNSGFISDRVREIQMQNYLRKKEQKAQREKDLRDGLILYKNAKYEE 240

Query: 241 ALEKFESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDP 300
           ALE+FESVLGSKP  +EASVASYNVACCYS+LNQLKAGLSAL+DA+EAGFEDFKR+RTDP
Sbjct: 241 ALERFESVLGSKPDPNEASVASYNVACCYSKLNQLKAGLSALKDAMEAGFEDFKRIRTDP 300

Query: 301 DLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
           DL+NLRT EEFEPL+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 DLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 336

[Close]

BLAST of Lsi10G009170 vs. NCBI nr
Match: gi|802659250|ref|XP_012080818.1| (PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas])

HSP 1 Score: 445.3 bits (1144), Expect = 9.5e-122
Identity = 243/332 (73.19%), Postives = 274/332 (82.53%), Query Frame = 1


Query: 8   LYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLFHLAFSTPNS--LKPSPFILRASDT 67
           LYSS   P+     +  +  +  Q++  L  + S F  + S  N+  LK S   + AS+T
Sbjct: 11  LYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNSNLTVNASET 70

Query: 68  ESKSD-TGLG-----DSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIAPGGFADK 127
           ESK+  +G G     +  +  + YEEYEVE+ QPYGLKFAKGRDGGTYIDAIAPGG ADK
Sbjct: 71  ESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK 130

Query: 128 TGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDSFGELTE 187
           TGLF+VGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGK D  GELTE
Sbjct: 131 TGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKLDYAGELTE 190

Query: 188 KEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFES 247
           KEIIRAERNSGVVSN+VREIQ+QN LR KEQKA+RENDLR+GL+LYK AKYEEALEKFES
Sbjct: 191 KEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQRENDLREGLQLYKAAKYEEALEKFES 250

Query: 248 VLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRT 307
           VLGSKP   EA+VASYNVACCYS+LNQLKAGLSALEDA++AGFEDFKR+RTDPDL+NLRT
Sbjct: 251 VLGSKPEPMEAAVASYNVACCYSKLNQLKAGLSALEDAMQAGFEDFKRIRTDPDLANLRT 310

Query: 308 LEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
            EEFEPL+KRFDESFINENAINAIKSLFGF K
Sbjct: 311 SEEFEPLLKRFDESFINENAINAIKSLFGFNK 342

[Close]

BLAST of Lsi10G009170 vs. NCBI nr
Match: gi|470117615|ref|XP_004294949.1| (PREDICTED: uncharacterized protein LOC101313964 [Fragaria vesca subsp. vesca])

HSP 1 Score: 443.0 bits (1138), Expect = 4.7e-121
Identity = 235/334 (70.36%), Postives = 272/334 (81.44%), Query Frame = 1


Query: 1   MSLAPHY---LYSSHSLPKFCPPNHSSSFTLCSQSHPKLFPSNSLFHLAFSTPNSLKPSP 60
           MSLAP     LYSS  LP+     H+ +       +     ++S    +F     +K S 
Sbjct: 1   MSLAPTSHLSLYSSPPLPRAALTRHNPALVFSQTKNWSCLTTSS----SFLNTQLVKLSI 60

Query: 61  FILRASDTESKSDTGLGDSDDANQPYEEYEVELLQPYGLKFAKGRDGGTYIDAIAPGGFA 120
           F++RAS+TES +    G  D   +PYEEYEVE++QPYGLKF KGRDGGTYIDAIAPGGFA
Sbjct: 61  FVVRASETESPTAESEGGGD---EPYEEYEVEIIQPYGLKFTKGRDGGTYIDAIAPGGFA 120

Query: 121 DKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKTDSFGEL 180
           +KTG FTVGDKV+ATSAVFG EIWPA+EYGRTMYTIRQR+GPLLM+MQKRYGK D+ GEL
Sbjct: 121 EKTGKFTVGDKVLATSAVFGEEIWPASEYGRTMYTIRQRVGPLLMKMQKRYGKLDTSGEL 180

Query: 181 TEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKF 240
           TEKEIIRAERNSG+VS K+REIQ+QN LR KEQKA+RE+DLR GL+LYK+ KYEEALEKF
Sbjct: 181 TEKEIIRAERNSGIVSGKLREIQMQNYLRKKEQKAQRESDLRVGLQLYKSGKYEEALEKF 240

Query: 241 ESVLGSKPTSDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNL 300
           ESVLGSKP S EASVASYNVACCYS+LNQ+KAGLSALE+AL++GFEDFKR+R+DPDL NL
Sbjct: 241 ESVLGSKPDSSEASVASYNVACCYSKLNQIKAGLSALEEALKSGFEDFKRIRSDPDLGNL 300

Query: 301 RTLEEFEPLVKRFDESFINENAINAIKSLFGFKK 332
           R  EEF+PL+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 RASEEFDPLLKRFDESFINENAINAIKSLFGFNK 327

The following BLAST results are available for this feature:

BLAST of Lsi10G009170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LPA1_ARATH	4.5e-07	36.05	Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 P...	[more]

BLAST of Lsi10G009170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR6_CUCSA	2.0e-158	90.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1	[more]
B9SBN8_RICCO	7.1e-124	72.86	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1	[more]
A0A067K3A5_JATCU	6.6e-122	73.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1	[more]
B9GXY1_POPTR	1.8e-119	69.03	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s20890g PE=4 SV=1	[more]
W9SBD7_9ROSA	3.4e-118	69.45	Uncharacterized protein OS=Morus notabilis GN=L484_019127 PE=4 SV=1	[more]

BLAST of Lsi10G009170 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55480.1	1.7e-113	65.48	protein containing PDZ domain, a K-box domain, and a TPR region	[more]
AT1G02910.1	2.6e-08	36.05	tetratricopeptide repeat (TPR)-containing protein	[more]
AT5G17170.1	2.2e-07	41.43	rubredoxin family protein	[more]

BLAST of Lsi10G009170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463844\|ref\|XP_004149641.1\|	2.8e-158	90.21	PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus]	[more]
gi\|659097949\|ref\|XP_008449894.1\|	2.4e-157	90.15	PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo]	[more]
gi\|255564826\|ref\|XP_002523407.1\|	1.0e-123	72.86	PREDICTED: uncharacterized protein LOC8282165 [Ricinus communis]	[more]
gi\|802659250\|ref\|XP_012080818.1\|	9.5e-122	73.19	PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas]	[more]
gi\|470117615\|ref\|XP_004294949.1\|	4.7e-121	70.36	PREDICTED: uncharacterized protein LOC101313964 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf
IPR001478	PDZ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009575	chromoplast stroma
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G009170.1	Lsi10G009170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	GENE3D	G3DSA:2.30.42.10		coord: 92..131 score: 7.
IPR001478	PDZ domain	PROFILE	PS50106	PDZ	coord: 94..133 score: 8
IPR001478	PDZ domain	unknown	SSF50156	PDZ domain-like	coord: 81..131 score: 1.0
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 219..280 score: 1.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 218..280 score: 1.5
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 214..284 score: 9
None	No IPR available	PANTHER	PTHR17130	MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25	coord: 38..331 score: 1.7E
None	No IPR available	PANTHER	PTHR17130:SF24	GAN	coord: 38..331 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G009170	Csa4G268040	Cucumber (Chinese Long) v2	culsiB246
Lsi10G009170	CSPI04G12510	Wild cucumber (PI 183967)	cpilsiB245
Lsi10G009170	Cucsa.152700	Cucumber (Gy14) v1	cgylsiB245
Lsi10G009170	CmaCh02G011650	Cucurbita maxima (Rimu)	cmalsiB540
Lsi10G009170	CmoCh02G011980	Cucurbita moschata (Rifu)	cmolsiB525
Lsi10G009170	Cla97C02G050670	Watermelon (97103) v2	lsiwmbB052
Lsi10G009170	Bhi10G000402	Wax gourd	lsiwgoB079
Lsi10G009170	Cp4.1LG05g05640	Cucurbita pepo (Zucchini)	cpelsiB598
Lsi10G009170	Carg13977	Silver-seed gourd	carlsiB458
Lsi10G009170	CsaV3_4G017550	Cucumber (Chinese Long) v3	cuclsiB271

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G009170	Cucurbita maxima (Rimu)	cmalsiB500
Lsi10G009170	Cucurbita moschata (Rifu)	cmolsiB484
Lsi10G009170	Cucurbita pepo (Zucchini)	cpelsiB227
Lsi10G009170	Melon (DHL92) v3.5.1	lsimeB072
Lsi10G009170	Watermelon (Charleston Gray)	lsiwcgB054
Lsi10G009170	Watermelon (97103) v1	lsiwmB078
Lsi10G009170	Cucumber (Gy14) v2	cgyblsiB235
Lsi10G009170	Melon (DHL92) v3.6.1	lsimedB074