CmaCh02G011650 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G011650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	tetratricopeptide repeat (TPR)-containing protein
Location	Cma_Chr02 : 6862654 .. 6865711 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTGGCTCCGCCCACCACTCTGTATCTATGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCACTCCCCAAATTTTGTTCTTCATTTCCTCTATGTTGCTCCCATCCCAAACTCTTTCTCTCCAATTCTCATTTTCATCTCTCCTTCGCCACCTCCTTTTCAAGCCTTCATTCACTTAAACCTTCAAATTTCGTCGTCAGAGCATCCGACGCTGATTCAGTTGCTGACCAACCTTATGAAGAGTATGAAGTGGAACTGGAGCAGCCTTATGGGTTGAAATTTGTCAAGGGACGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTGCTGCCGACAAGACGGGATTGTTCACGGTTGGGGATAAAGTTATTGCTACCAGGTATCATTTTCCTTATCTCTGCTCTGTAAATCTTGCTCATTATGATCATCAACGATTGACCTATCTATTTATTCGAGCTTGTTTAGAAATTTGAATTGTGAAATGAAAATGATAGGACGTGGTTTTGTTGCGTTTTCTGTAAGATTTTCTAGAATGGTGGATGCAGGGGTCATTGATGCTTTCTTTGGTAGTCTAAAATTAGTTTATACTAGATGGCGCCTGGATGAGACAACGAGATAGCATGATCACCTGGTCAACAACAACAAATTTTGTCATGTACAAACCATGGTTACTATGTTAAATCATTTAATCTGCTTGTCTCTCCCTTGTCAGCTTGAAATGATCACTCAACTCATGCTTAGTCTGAAAAGTTCAAGTAAATCTAATGAATAATTTTCGTGACACAGTACAGAGCAGGATAATGATTGACTCCACTGCTTCAGATAAGGGTCAATTATGATTACTGAAAAATTTTCTTCTTGTTGATTTGTGTATTCATGCTAAAGAAAGTAAAATGGAGAAAAGAAAAAGAAAAAAATCTAGGCTTCTTAAATTTGTCGTGTGTTTTTCCCACAGGCTAAGATTTTCATTCACTCAACTGTTCAAAGGAGAATTATATGATGTATGCTTAAAATTTGTCTTGTTGCTGTCGTGTCGTGCATTTTTTTTCCCAAAGTAAACTAAAAGGAGAAAGGGAAAAGAAAAGAATGACTTGGCTTAGTATGAAAATGTGTAAAGAACATTCCTAGCAGAAACATTTGCAGCTTTCTTTTCTTCCATGGTTGGGATATGATAAAAGAATAGTTACATCAATGCAGTGCAGTGTTTGGGACAGAAATATGGCCTGCTGCTGAATACGGAAGGACAATGTATACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGGAGAAGAGATATGGTCAGTTATCAATCATACTCAATAAATCAATAACGAATAAAAGTACAAAAGATAAAAACAAATCACTTTTCTTAAAATTGGTTGATGACCTGTATAAATCCGAGTTTTATTATAAACATACTCTTATCTTTATCTATAAATATGATCTTTGTAAATTGTGTGTGATTGTTTTTCAGGAAAGACAGATGGTTATGGTGAGTTGACGGAAAAGGAGTTAATCAGAGCAGAGAGAAACTCGGGCGTAGTTAGTAATAAAGTGAGAGAAATTCAAGTAAGTGAACATTTACTAGCAGCTAATGATATTATATTGAAGTTATAAATTCAAGTGAGAATCCAAATGTTTCGTTAAGAAAGACAGAACTGTTATAAAGAAAATGTGAAAAAAACAAGCCTAATTTTTAAAAACCATAACCAAAAAACTAAATAGTTATCGAACATGATCATAGTTATCACTTTTTCGGGGTTTGTAATGACAATTGGGACATGTTAACCATTGGGTATTTAGTGAACCTAAGGTTGATCTCCTTGGTTGTGGACTTCTGATGGACACCCAGTTCATACTTTTTCCCCTGCCCGCATTTTCTTATCTAAAAAGGAAAAATCATCCATTCTAAAGAGTTCAACCAGCTGGGCATCTATAATTGCACAAAACTACCGGAAAGAAGAAGAAAAATGCATTAGAAAAGGTTTGCTGTACTATTTACATATTATAGGTGTAATTGTTACAGATGCAAAATGCCATGAGGTTGAAGGAGCAGAAAGCGCGCAGAGAAGATGACCTGCGCCAAGGACTACGTCTCTACAAGTATGTTGCATATCTAACTTGCCCTGCCCTTCTATTGTTTACTAAATTGTGCCCACATCAATGTCCAACCCCGCCTTTCTTTTTGTTCTTTTCCCTCAAGGAATGCTAAATATGAGGAAGCATTAGAGAAATTTGAGTCAGTGTTGGGATCCAAACCAACTCCAGACGAAGCATCAGTTGCCAGTTACAATGTTGCATGCTGTTACTCCCAACTAAATGAGGTAATGGTTTATACAGAATCGTTTCGTAAATTATTATCGAATTTAGTGTTCGTTTGGAATGACTTTTAAGACATTTTAAACTAAGCTGCAACGTTATTATGCTTTCTCTAAGACCATTTGTTTACTAAATGTTTGTATCTTTCTGGCCAAAATTCCACAAAATGGGGAATGACTGACTAGTGTACCTTTATACTTTTCGAACAGTTAAAAGCTGGGCTATCCGCACTTGAAGACGCCTTGGCAGCAGGATTTGAAGACTTCAAGGTATCAGCCACTTCGTTTTTTTTAGTTATTACATGCCCTGGACAATTATATGTGGAGAAGTTTTGGTGAAATCATTGTTCTTAATGTTTGCCAGAGAATTCGGACGGATCCTGATCTATCAAACTTGAGGACATTGGAGGAATTTGAGACTCTTCTGAAAAGGTTTGACGAGTCGTTTATCAATGAGAATGCCATCAATGCCATTAAGTCGCTATTCGGTTTCAAGAAATAAGAACTAGACTCTTCTATGGTTATCTTTTATTAAGTAATTCAAATTATTGTTGTCACATATTGTATCAAAGTATTCAAAGATTCAAACGTATAGTTAACGAAAAAATTTCAATGTAATTCGTTTTTTTACATCTTATTAGTGATACATATTGAAGCACCATGACTTAACAAGTTGAGCATATTGTTGTATTTGATTAATTTTGGTCAA

mRNA sequence

ATGTCTCTGGCTCCGCCCACCACTCTGTATCTATGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCACTCCCCAAATTTTGTTCTTCATTTCCTCTATGTTGCTCCCATCCCAAACTCTTTCTCTCCAATTCTCATTTTCATCTCTCCTTCGCCACCTCCTTTTCAAGCCTTCATTCACTTAAACCTTCAAATTTCGTCGTCAGAGCATCCGACGCTGATTCAGTTGCTGACCAACCTTATGAAGAGTATGAAGTGGAACTGGAGCAGCCTTATGGGTTGAAATTTGTCAAGGGACGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTGCTGCCGACAAGACGGGATTGTTCACGGTTGGGGATAAAGTTATTGCTACCAGTGCAGTGTTTGGGACAGAAATATGGCCTGCTGCTGAATACGGAAGGACAATGTATACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGGAGAAGAGATATGGAAAGACAGATGGTTATGGTGAGTTGACGGAAAAGGAGTTAATCAGAGCAGAGAGAAACTCGGGCGTAGTTAGTAATAAAGTGAGAGAAATTCAAATGCAAAATGCCATGAGGTTGAAGGAGCAGAAAGCGCGCAGAGAAGATGACCTGCGCCAAGGACTACGTCTCTACAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTTGAGTCAGTGTTGGGATCCAAACCAACTCCAGACGAAGCATCAGTTGCCAGTTACAATGTTGCATGCTGTTACTCCCAACTAAATGAGTTAAAAGCTGGGCTATCCGCACTTGAAGACGCCTTGGCAGCAGGATTTGAAGACTTCAAGAGAATTCGGACGGATCCTGATCTATCAAACTTGAGGACATTGGAGGAATTTGAGACTCTTCTGAAAAGGTTTGACGAGTCGTTTATCAATGAGAATGCCATCAATGCCATTAAGTCGCTATTCGGTTTCAAGAAATAAGAACTAGACTCTTCTATGGTTATCTTTTATTAAGTAATTCAAATTATTGTTGTCACATATTGTATCAAAGTATTCAAAGATTCAAACGTATAGTTAACGAAAAAATTTCAATGTAATTCGTTTTTTTACATCTTATTAGTGATACATATTGAAGCACCATGACTTAACAAGTTGAGCATATTGTTGTATTTGATTAATTTTGGTCAA

Coding sequence (CDS)

ATGTCTCTGGCTCCGCCCACCACTCTGTATCTATGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCACTCCCCAAATTTTGTTCTTCATTTCCTCTATGTTGCTCCCATCCCAAACTCTTTCTCTCCAATTCTCATTTTCATCTCTCCTTCGCCACCTCCTTTTCAAGCCTTCATTCACTTAAACCTTCAAATTTCGTCGTCAGAGCATCCGACGCTGATTCAGTTGCTGACCAACCTTATGAAGAGTATGAAGTGGAACTGGAGCAGCCTTATGGGTTGAAATTTGTCAAGGGACGAGATGGTGGAACTTATATCGACGCCATTGCACCTGGTGGTGCTGCCGACAAGACGGGATTGTTCACGGTTGGGGATAAAGTTATTGCTACCAGTGCAGTGTTTGGGACAGAAATATGGCCTGCTGCTGAATACGGAAGGACAATGTATACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGGAGAAGAGATATGGAAAGACAGATGGTTATGGTGAGTTGACGGAAAAGGAGTTAATCAGAGCAGAGAGAAACTCGGGCGTAGTTAGTAATAAAGTGAGAGAAATTCAAATGCAAAATGCCATGAGGTTGAAGGAGCAGAAAGCGCGCAGAGAAGATGACCTGCGCCAAGGACTACGTCTCTACAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTTGAGTCAGTGTTGGGATCCAAACCAACTCCAGACGAAGCATCAGTTGCCAGTTACAATGTTGCATGCTGTTACTCCCAACTAAATGAGTTAAAAGCTGGGCTATCCGCACTTGAAGACGCCTTGGCAGCAGGATTTGAAGACTTCAAGAGAATTCGGACGGATCCTGATCTATCAAACTTGAGGACATTGGAGGAATTTGAGACTCTTCTGAAAAGGTTTGACGAGTCGTTTATCAATGAGAATGCCATCAATGCCATTAAGTCGCTATTCGGTTTCAAGAAATAA

Protein sequence

MSLAPPTTLYLCSSSSSSSSSSSSSQPLPKFCSSFPLCCSHPKLFLSNSHFHLSFATSFSSLHSLKPSNFVVRASDADSVADQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRTDPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFKK

Homology

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BLAST of CmaCh02G011650 vs. Swiss-Prot
Match: LPA1_ARATH (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1


Query: 223 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAA 282
           GL L+K  + ++AL +FE+ L   P P E+  A YN ACC++   E K  +  L  AL  
Sbjct: 82  GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141

Query: 283 GFEDFKRIRTDPDLSNLRTLEEFETL 309
               F  I  DPDL++ R L EF+ L
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKEL 167

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BLAST of CmaCh02G011650 vs. TrEMBL
Match: A0A0A0KWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 6.6e-138
Identity = 276/350 (78.86%), Postives = 295/350 (84.29%), Query Frame = 1


Query: 1   MSLAPPTTLY-------LCSSSSSSSSSSSSSQPLPKFCSSFPLCC---SHPKLFLSNSH 60
           MSLAPP  LY       +C  + SSSSSSS           F LC    SHPKL      
Sbjct: 5   MSLAPPY-LYSSHLLPKICPPNHSSSSSSS-----------FILCSQSHSHPKLS----- 64

Query: 61  FHLSFATSFSSLHSLKPSNFVVRASDADSVAD--------QPYEEYEVELEQPYGLKFVK 120
            HL F+TSFS+ HSLK S F++RASD +S  D        QPYEEYEVELEQPYGLKF K
Sbjct: 65  -HLPFSTSFSTSHSLKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAK 124

Query: 121 GRDGGTYIDAIAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL 180
           GRDGGTYIDAIAPGG ADKTGLFTVGDKV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPL
Sbjct: 125 GRDGGTYIDAIAPGGFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPL 184

Query: 181 LMKMEKRYGKTDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQ 240
           LMKM+KRYGKTD +GELTEKE+IRAERNSGVVSNKVREIQ+QNA+R+KEQKARRE+DLRQ
Sbjct: 185 LMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQ 244

Query: 241 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAA 300
           GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLN+LKAGLSALEDAL A
Sbjct: 245 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEA 304

Query: 301 GFEDFKRIRTDPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFK 333
           GFEDFKR+RTDPDLSN+RTLEEFE L+KRFDESFINENAINAIKSLFGFK
Sbjct: 305 GFEDFKRVRTDPDLSNIRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 336

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BLAST of CmaCh02G011650 vs. TrEMBL
Match: B9SBN8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 2.3e-122
Identity = 244/335 (72.84%), Postives = 275/335 (82.09%), Query Frame = 1


Query: 13  SSSSSSSSSSSSSQPLPKFCS--SFPLCCSHPKLFLSNSHFHLSFATSFSSLHSLKPSNF 72
           S + SS +S  +S PLP+  +    PL  S    F S +    + +TSFSS H LKPSN 
Sbjct: 2   SLAPSSYASLYTSPPLPRTITIKQNPLIFSQNNPFFSKNCSFFTTSTSFSSTHLLKPSNL 61

Query: 73  VVRASDADSVA------------DQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGA 132
            V+AS+ +S A            ++ YEEYEVEL QPYG+KF KGRDG TYIDAIAPGGA
Sbjct: 62  TVKASETESKASKSESGSTEGEGEEQYEEYEVELLQPYGIKFAKGRDGATYIDAIAPGGA 121

Query: 133 ADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGE 192
           ADKTG+FTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMK++KRYGKTD  GE
Sbjct: 122 ADKTGMFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKLQKRYGKTDYAGE 181

Query: 193 LTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKYEEALEK 252
           +TEKE+IRAERNSG +S++VREIQMQN +R KEQKA+RE DLR GL LYKNAKYEEALE+
Sbjct: 182 MTEKEIIRAERNSGFISDRVREIQMQNYLRKKEQKAQREKDLRDGLILYKNAKYEEALER 241

Query: 253 FESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRTDPDLSN 312
           FESVLGSKP P+EASVASYNVACCYS+LN+LKAGLSAL+DA+ AGFEDFKRIRTDPDL+N
Sbjct: 242 FESVLGSKPDPNEASVASYNVACCYSKLNQLKAGLSALKDAMEAGFEDFKRIRTDPDLAN 301

Query: 313 LRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           LRT EEFE LLKRFDESFINENAINAIKSLFGF K
Sbjct: 302 LRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 336

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BLAST of CmaCh02G011650 vs. TrEMBL
Match: A0A067K3A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 245/341 (71.85%), Postives = 275/341 (80.65%), Query Frame = 1


Query: 13  SSSSSSSSSSSSSQPLPKFCSSF----PLCCSHPKLFLSNSHFHLSFATSFSSLHSLKPS 72
           S +SSS  S  SS P P+  +S     PL       FLS +    +++TS S+ H LK S
Sbjct: 2   SIASSSYPSLYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNS 61

Query: 73  NFVVRASDADSVA----------------DQPYEEYEVELEQPYGLKFVKGRDGGTYIDA 132
           N  V AS+ +S                  ++ YEEYEVE+EQPYGLKF KGRDGGTYIDA
Sbjct: 62  NLTVNASETESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDA 121

Query: 133 IAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGK 192
           IAPGG+ADKTGLF+VGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KRYGK
Sbjct: 122 IAPGGSADKTGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGK 181

Query: 193 TDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKY 252
            D  GELTEKE+IRAERNSGVVSN+VREIQMQN +R KEQKA+RE+DLR+GL+LYK AKY
Sbjct: 182 LDYAGELTEKEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQRENDLREGLQLYKAAKY 241

Query: 253 EEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRT 312
           EEALEKFESVLGSKP P EA+VASYNVACCYS+LN+LKAGLSALEDA+ AGFEDFKRIRT
Sbjct: 242 EEALEKFESVLGSKPEPMEAAVASYNVACCYSKLNQLKAGLSALEDAMQAGFEDFKRIRT 301

Query: 313 DPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           DPDL+NLRT EEFE LLKRFDESFINENAINAIKSLFGF K
Sbjct: 302 DPDLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 342

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BLAST of CmaCh02G011650 vs. TrEMBL
Match: B9GXY1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s20890g PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 5.3e-119
Identity = 241/351 (68.66%), Postives = 274/351 (78.06%), Query Frame = 1


Query: 1   MSLAPPTTLYLCSSSSSSSSSSSSSQPLPKFCSSFPLCCSHPKLFLSNSHFHLSFATSFS 60
           MSLAP     L SSS   +SS  + Q         PL  S    FLS ++  LS +T+FS
Sbjct: 1   MSLAPSRYPALYSSSPLPTSSVQAKQ--------IPLLFSQNTHFLSKNYSFLSTSTAFS 60

Query: 61  SLHSLKPSNFVVRASDADSVA------------------DQPYEEYEVELEQPYGLKFVK 120
           +   LKPSN +++AS+ +S                    ++ YEEYEVE+EQPYG+KF K
Sbjct: 61  NTLLLKPSNSILKASETESQTSKSAESGSGGEGEGEGEGEEKYEEYEVEIEQPYGIKFAK 120

Query: 121 GRDGGTYIDAIAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL 180
           GRDG TYIDAIAPGG+ADK G F+VGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL
Sbjct: 121 GRDGSTYIDAIAPGGSADKNGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL 180

Query: 181 LMKMEKRYGKTDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQ 240
            MKM+KRYG  D  GELTEKE+IRAERNSGV+SN+VREIQMQN +R KEQK +RE DLR+
Sbjct: 181 FMKMQKRYGNMDYTGELTEKEIIRAERNSGVISNRVREIQMQNYLRKKEQKEQREKDLRE 240

Query: 241 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAA 300
           GL+LYKNAKYEEALEKFES+LGSKP P EA+VASYNVACCYS+LN+L+AGLSALEDA+ A
Sbjct: 241 GLQLYKNAKYEEALEKFESMLGSKPDPTEAAVASYNVACCYSKLNQLQAGLSALEDAMKA 300

Query: 301 GFEDFKRIRTDPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           GFEDFKRIRTDPDLSNLRT E FE L+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 GFEDFKRIRTDPDLSNLRTAEGFEPLMKRFDESFINENAINAIKSLFGFNK 343

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BLAST of CmaCh02G011650 vs. TrEMBL
Match: A0A061GS66_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_039852 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 6.4e-117
Identity = 230/325 (70.77%), Postives = 266/325 (81.85%), Query Frame = 1


Query: 13  SSSSSSSSSSSSSQPLPKFCSSFPLCCSHPKLFLSNSHFHLSFATSFSSLHSLKPSNFVV 72
           S + SS  S  SS PLP+          H     SN  F  + + SF S    KP   VV
Sbjct: 2   SLAPSSHPSLCSSPPLPRTSHILFSSIKHVVFNNSNCSFFSTSSVSFCSAKEPKPPVSVV 61

Query: 73  RASDADSV-------ADQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLF 132
           +AS+ +S        +++ YEEYE+E+EQPYGLKF KGRDGGTYIDAI PGGAADKTG+F
Sbjct: 62  KASETESQTTNQEPESEEQYEEYEIEIEQPYGLKFRKGRDGGTYIDAILPGGAADKTGVF 121

Query: 133 TVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGELTEKELI 192
           TVGDKV+ATSAVFGTEIWP+AEYGRTMYTIRQRIGPLLMKM+KRYGK D  GELTEKE+I
Sbjct: 122 TVGDKVLATSAVFGTEIWPSAEYGRTMYTIRQRIGPLLMKMQKRYGKVDDGGELTEKEII 181

Query: 193 RAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKYEEALEKFESVLGS 252
           RAERNSGV+SN+VREIQMQN +R KEQK RR  DLR+GL+LY++AKYEEALEKFESVLGS
Sbjct: 182 RAERNSGVISNRVREIQMQNYLRKKEQKERRAMDLREGLQLYRSAKYEEALEKFESVLGS 241

Query: 253 KPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRTDPDLSNLRTLEEF 312
           KP PDEASVASYNVACCY++LN+++AGLSAL+DAL AGF+DFKRIRTDPDL+NL+T E+F
Sbjct: 242 KPEPDEASVASYNVACCYAKLNQIQAGLSALQDALQAGFDDFKRIRTDPDLANLKTSEQF 301

Query: 313 ETLLKRFDESFINENAINAIKSLFG 331
           E+LLKRFDESFINENA+NAIKSLFG
Sbjct: 302 ESLLKRFDESFINENAVNAIKSLFG 326

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BLAST of CmaCh02G011650 vs. TAIR10
Match: AT1G55480.1 (AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region)

HSP 1 Score: 398.7 bits (1023), Expect = 3.6e-111
Identity = 221/343 (64.43%), Postives = 266/343 (77.55%), Query Frame = 1


Query: 1   MSLAPPTTLYLCSSSSSSSSSSSSSQPLPKFCSSFPLCCSHPKLFLSNSHFHLSFATSFS 60
           MSLAP +   L SS S   +  +   P     SSF    S   LFLS++      + S  
Sbjct: 1   MSLAPSSYPSLYSSPSLPRTQQTKQNPSLITQSSF---ISAKSLFLSSN------SASLC 60

Query: 61  SLHSLKPSNFVVRASDADSVA----------DQPYEEYEVELEQPYGLKFVKGRDGGTYI 120
           + H  K  N  ++AS+ +S A          ++ YE YE+E+EQPYGLKF KGRDGGTYI
Sbjct: 61  NTHVAKRRNLALKASETESSAKAEAGGDGEEEEKYETYEIEVEQPYGLKFRKGRDGGTYI 120

Query: 121 DAIAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRY 180
           DAI PGG+ADKTG FTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+MEKR 
Sbjct: 121 DAILPGGSADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRN 180

Query: 181 GKTDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNA 240
           GK +  GELTEKE+IRAERN+G +S+++REIQMQN ++ KEQKA+RE DLR+GL+  KN 
Sbjct: 181 GKAEDTGELTEKEIIRAERNAGYISSRLREIQMQNYLKKKEQKAQREKDLREGLQFSKNG 240

Query: 241 KYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRI 300
           KYEEALE+FESVLGSKPTP+EASVASYNVACCYS+LN+++AGLSALE+AL +G+EDFKRI
Sbjct: 241 KYEEALERFESVLGSKPTPEEASVASYNVACCYSKLNQVQAGLSALEEALKSGYEDFKRI 300

Query: 301 RTDPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           R+DPDL  LR  ++F+ LLK+FDESFINE+AINAIKSLFGF K
Sbjct: 301 RSDPDLETLRKSKDFDPLLKQFDESFINESAINAIKSLFGFNK 334

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BLAST of CmaCh02G011650 vs. TAIR10
Match: AT1G02910.1 (AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1


Query: 223 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAA 282
           GL L+K  + ++AL +FE+ L   P P E+  A YN ACC++   E K  +  L  AL  
Sbjct: 82  GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141

Query: 283 GFEDFKRIRTDPDLSNLRTLEEFETL 309
               F  I  DPDL++ R L EF+ L
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKEL 167

[Close]

BLAST of CmaCh02G011650 vs. TAIR10
Match: AT5G17170.1 (AT5G17170.1 rubredoxin family protein)

HSP 1 Score: 48.9 bits (115), Expect = 7.0e-06
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 1


Query: 15  SSSSSSSSSSSQPLPKFCSSFPLCCSHPKLF----LSNSHFHLS--FATS---FSSLHSL 74
           SS  + ++++S P PK  SS  L  S   +F    L +S   +S  FA S      L+ L
Sbjct: 13  SSFFTKTTTTSNPSPKLHSSASLL-SQKTVFQGVSLEDSKKSVSEIFAVSERKIGGLNGL 72

Query: 75  KPSNFVVRASDADSVADQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLF 134
           +      RA+ + ++        EVE+++P GL   + + GG  I  +  GG A K GL 
Sbjct: 73  RRFEIKARAAASKTI--------EVEVDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLK 132

Query: 135 TVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQR 159
           + GD+V+ TS+ FG E+WPA + G T   I+ +
Sbjct: 133 S-GDQVVYTSSFFGDELWPADKLGFTKTAIQAK 155

[Close]

BLAST of CmaCh02G011650 vs. NCBI nr
Match: gi|449463844|ref|XP_004149641.1| (PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus])

HSP 1 Score: 498.4 bits (1282), Expect = 9.5e-138
Identity = 276/350 (78.86%), Postives = 295/350 (84.29%), Query Frame = 1


Query: 1   MSLAPPTTLY-------LCSSSSSSSSSSSSSQPLPKFCSSFPLCC---SHPKLFLSNSH 60
           MSLAPP  LY       +C  + SSSSSSS           F LC    SHPKL      
Sbjct: 5   MSLAPPY-LYSSHLLPKICPPNHSSSSSSS-----------FILCSQSHSHPKLS----- 64

Query: 61  FHLSFATSFSSLHSLKPSNFVVRASDADSVAD--------QPYEEYEVELEQPYGLKFVK 120
            HL F+TSFS+ HSLK S F++RASD +S  D        QPYEEYEVELEQPYGLKF K
Sbjct: 65  -HLPFSTSFSTSHSLKHSPFILRASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAK 124

Query: 121 GRDGGTYIDAIAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPL 180
           GRDGGTYIDAIAPGG ADKTGLFTVGDKV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPL
Sbjct: 125 GRDGGTYIDAIAPGGFADKTGLFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPL 184

Query: 181 LMKMEKRYGKTDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQ 240
           LMKM+KRYGKTD +GELTEKE+IRAERNSGVVSNKVREIQ+QNA+R+KEQKARRE+DLRQ
Sbjct: 185 LMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQ 244

Query: 241 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAA 300
           GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLN+LKAGLSALEDAL A
Sbjct: 245 GLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEA 304

Query: 301 GFEDFKRIRTDPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFK 333
           GFEDFKR+RTDPDLSN+RTLEEFE L+KRFDESFINENAINAIKSLFGFK
Sbjct: 305 GFEDFKRVRTDPDLSNIRTLEEFEPLVKRFDESFINENAINAIKSLFGFK 336

[Close]

BLAST of CmaCh02G011650 vs. NCBI nr
Match: gi|659097949|ref|XP_008449894.1| (PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo])

HSP 1 Score: 497.3 bits (1279), Expect = 2.1e-137
Identity = 266/327 (81.35%), Postives = 284/327 (86.85%), Query Frame = 1


Query: 24  SSQPLPKFC-------SSFPLCC---SHPKLFLSNSHFHLSFATSFSSLHSLKPSNFVVR 83
           SS+ LPK C       SSF LC    SHPKL       H  F+TSFS+ HSLK S F++R
Sbjct: 14  SSRLLPKICPPNHSSSSSFILCSQSHSHPKLS------HPPFSTSFSTSHSLKHSPFILR 73

Query: 84  ASDADSVAD--------QPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGAADKTGLF 143
           ASD +S  D        QPYEEYEVELEQPYGLKF KGRDGGTYIDAIAPGG ADKTGLF
Sbjct: 74  ASDTESKTDTDSDDPNQQPYEEYEVELEQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLF 133

Query: 144 TVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGELTEKELI 203
           TVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKM+KRYGKTD +GELTEKE+I
Sbjct: 134 TVGDRVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEII 193

Query: 204 RAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKYEEALEKFESVLGS 263
           RAERNSGVVSNKVREIQ+QNA+R+KEQKARRE+DLRQGLRLYKNAKYEEALEKFESVLGS
Sbjct: 194 RAERNSGVVSNKVREIQLQNALRMKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGS 253

Query: 264 KPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRTDPDLSNLRTLEEF 323
           KPTPDEASVASYNVACCYSQLN+LKAGLSALEDAL AGFEDFKR+RTDPDLSNLR LEEF
Sbjct: 254 KPTPDEASVASYNVACCYSQLNQLKAGLSALEDALGAGFEDFKRVRTDPDLSNLRALEEF 313

Query: 324 ETLLKRFDESFINENAINAIKSLFGFK 333
           E L+KRFDESFINENAINAIKSLFGFK
Sbjct: 314 EPLVKRFDESFINENAINAIKSLFGFK 334

[Close]

BLAST of CmaCh02G011650 vs. NCBI nr
Match: gi|255564826|ref|XP_002523407.1| (PREDICTED: uncharacterized protein LOC8282165 [Ricinus communis])

HSP 1 Score: 446.8 bits (1148), Expect = 3.3e-122
Identity = 244/335 (72.84%), Postives = 275/335 (82.09%), Query Frame = 1


Query: 13  SSSSSSSSSSSSSQPLPKFCS--SFPLCCSHPKLFLSNSHFHLSFATSFSSLHSLKPSNF 72
           S + SS +S  +S PLP+  +    PL  S    F S +    + +TSFSS H LKPSN 
Sbjct: 2   SLAPSSYASLYTSPPLPRTITIKQNPLIFSQNNPFFSKNCSFFTTSTSFSSTHLLKPSNL 61

Query: 73  VVRASDADSVA------------DQPYEEYEVELEQPYGLKFVKGRDGGTYIDAIAPGGA 132
            V+AS+ +S A            ++ YEEYEVEL QPYG+KF KGRDG TYIDAIAPGGA
Sbjct: 62  TVKASETESKASKSESGSTEGEGEEQYEEYEVELLQPYGIKFAKGRDGATYIDAIAPGGA 121

Query: 133 ADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGKTDGYGE 192
           ADKTG+FTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMK++KRYGKTD  GE
Sbjct: 122 ADKTGMFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKLQKRYGKTDYAGE 181

Query: 193 LTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKYEEALEK 252
           +TEKE+IRAERNSG +S++VREIQMQN +R KEQKA+RE DLR GL LYKNAKYEEALE+
Sbjct: 182 MTEKEIIRAERNSGFISDRVREIQMQNYLRKKEQKAQREKDLRDGLILYKNAKYEEALER 241

Query: 253 FESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRTDPDLSN 312
           FESVLGSKP P+EASVASYNVACCYS+LN+LKAGLSAL+DA+ AGFEDFKRIRTDPDL+N
Sbjct: 242 FESVLGSKPDPNEASVASYNVACCYSKLNQLKAGLSALKDAMEAGFEDFKRIRTDPDLAN 301

Query: 313 LRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           LRT EEFE LLKRFDESFINENAINAIKSLFGF K
Sbjct: 302 LRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 336

[Close]

BLAST of CmaCh02G011650 vs. NCBI nr
Match: gi|802659250|ref|XP_012080818.1| (PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas])

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-121
Identity = 245/341 (71.85%), Postives = 275/341 (80.65%), Query Frame = 1


Query: 13  SSSSSSSSSSSSSQPLPKFCSSF----PLCCSHPKLFLSNSHFHLSFATSFSSLHSLKPS 72
           S +SSS  S  SS P P+  +S     PL       FLS +    +++TS S+ H LK S
Sbjct: 2   SIASSSYPSLYSSPPFPRTNTSTNKQNPLVFYQTNHFLSKNFSFFTYSTSLSNTHLLKNS 61

Query: 73  NFVVRASDADSVA----------------DQPYEEYEVELEQPYGLKFVKGRDGGTYIDA 132
           N  V AS+ +S                  ++ YEEYEVE+EQPYGLKF KGRDGGTYIDA
Sbjct: 62  NLTVNASETESKTPKSGSGSEGGEEEGEGEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDA 121

Query: 133 IAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMEKRYGK 192
           IAPGG+ADKTGLF+VGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KRYGK
Sbjct: 122 IAPGGSADKTGLFSVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGK 181

Query: 193 TDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGLRLYKNAKY 252
            D  GELTEKE+IRAERNSGVVSN+VREIQMQN +R KEQKA+RE+DLR+GL+LYK AKY
Sbjct: 182 LDYAGELTEKEIIRAERNSGVVSNRVREIQMQNYLRKKEQKAQRENDLREGLQLYKAAKY 241

Query: 253 EEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGFEDFKRIRT 312
           EEALEKFESVLGSKP P EA+VASYNVACCYS+LN+LKAGLSALEDA+ AGFEDFKRIRT
Sbjct: 242 EEALEKFESVLGSKPEPMEAAVASYNVACCYSKLNQLKAGLSALEDAMQAGFEDFKRIRT 301

Query: 313 DPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           DPDL+NLRT EEFE LLKRFDESFINENAINAIKSLFGF K
Sbjct: 302 DPDLANLRTSEEFEPLLKRFDESFINENAINAIKSLFGFNK 342

[Close]

BLAST of CmaCh02G011650 vs. NCBI nr
Match: gi|743835876|ref|XP_011025128.1| (PREDICTED: uncharacterized protein LOC105126081 [Populus euphratica])

HSP 1 Score: 439.5 bits (1129), Expect = 5.2e-120
Identity = 243/349 (69.63%), Postives = 276/349 (79.08%), Query Frame = 1


Query: 1   MSLAPPTTLYLCSSSSSSSSSSSSSQPLPKFCSSFPLCCSHPKLFLSNSHFHLSFATSFS 60
           MSLAP     L SSS   +SS  + Q         PL  S    FLS ++  LS +T+FS
Sbjct: 1   MSLAPSRYPSLYSSSPLPTSSVQAKQ--------IPLLFSQNTHFLSKNYSFLSTSTAFS 60

Query: 61  SLHSLKPSNFVVRASDADSVA----------------DQPYEEYEVELEQPYGLKFVKGR 120
           +   LKPSN +++AS+ +S                  ++ YEEYEVE+EQPYG+KF KGR
Sbjct: 61  NTLLLKPSNSILKASETESQTSKSAESGSGGEGEGEGEEKYEEYEVEIEQPYGIKFAKGR 120

Query: 121 DGGTYIDAIAPGGAADKTGLFTVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM 180
           DG TYIDAIAPGG+ADKTG F+VGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM
Sbjct: 121 DGATYIDAIAPGGSADKTGKFSVGDKVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM 180

Query: 181 KMEKRYGKTDGYGELTEKELIRAERNSGVVSNKVREIQMQNAMRLKEQKARREDDLRQGL 240
           KM+KRYG  D  GELTEKE+IRAERNSGV+SN+VREIQMQN +R KEQK +RE DLR+GL
Sbjct: 181 KMQKRYGNMDYTGELTEKEIIRAERNSGVISNRVREIQMQNYIRKKEQKEQREKDLREGL 240

Query: 241 RLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNELKAGLSALEDALAAGF 300
           +LYKNAKYEEALEKFES+LGSKP P EA+VASYNVACCYS+LN+L+AGLSALEDA+ AGF
Sbjct: 241 QLYKNAKYEEALEKFESMLGSKPDPTEAAVASYNVACCYSKLNQLQAGLSALEDAMKAGF 300

Query: 301 EDFKRIRTDPDLSNLRTLEEFETLLKRFDESFINENAINAIKSLFGFKK 334
           EDFKRIRTDPDLSNLRT E FE L+KRFDESFINENAINAIKSLFGF K
Sbjct: 301 EDFKRIRTDPDLSNLRTAEGFEPLMKRFDESFINENAINAIKSLFGFNK 341

The following BLAST results are available for this feature:

BLAST of CmaCh02G011650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LPA1_ARATH	1.9e-08	39.53	Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 P...	[more]

BLAST of CmaCh02G011650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR6_CUCSA	6.6e-138	78.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268040 PE=4 SV=1	[more]
B9SBN8_RICCO	2.3e-122	72.84	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0342940 PE=4 SV=1	[more]
A0A067K3A5_JATCU	1.1e-121	71.85	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16187 PE=4 SV=1	[more]
B9GXY1_POPTR	5.3e-119	68.66	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s20890g PE=4 SV=1	[more]
A0A061GS66_THECC	6.4e-117	70.77	Uncharacterized protein OS=Theobroma cacao GN=TCM_039852 PE=4 SV=1	[more]

BLAST of CmaCh02G011650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55480.1	3.6e-111	64.43	protein containing PDZ domain, a K-box domain, and a TPR region	[more]
AT1G02910.1	1.0e-09	39.53	tetratricopeptide repeat (TPR)-containing protein	[more]
AT5G17170.1	7.0e-06	32.68	rubredoxin family protein	[more]

BLAST of CmaCh02G011650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463844\|ref\|XP_004149641.1\|	9.5e-138	78.86	PREDICTED: uncharacterized protein LOC101217229 [Cucumis sativus]	[more]
gi\|659097949\|ref\|XP_008449894.1\|	2.1e-137	81.35	PREDICTED: uncharacterized protein LOC103491636 [Cucumis melo]	[more]
gi\|255564826\|ref\|XP_002523407.1\|	3.3e-122	72.84	PREDICTED: uncharacterized protein LOC8282165 [Ricinus communis]	[more]
gi\|802659250\|ref\|XP_012080818.1\|	1.6e-121	71.85	PREDICTED: uncharacterized protein LOC105640994 [Jatropha curcas]	[more]
gi\|743835876\|ref\|XP_011025128.1\|	5.2e-120	69.63	PREDICTED: uncharacterized protein LOC105126081 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0008150	biological_process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009575	chromoplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G011650.1	CmaCh02G011650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	GENE3D	G3DSA:2.30.42.10		coord: 75..133 score: 1.
IPR001478	PDZ domain	PROFILE	PS50106	PDZ	coord: 96..135 score: 9
IPR001478	PDZ domain	unknown	SSF50156	PDZ domain-like	coord: 87..133 score: 2.0
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 221..282 score: 1.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 220..282 score: 1.7
None	No IPR available	PANTHER	PTHR17130	MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25	coord: 43..333 score: 1.8E
None	No IPR available	PANTHER	PTHR17130:SF24	GAN	coord: 43..333 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G011650	Cucsa.152700	Cucumber (Gy14) v1	cgycmaB0424
CmaCh02G011650	Csa4G268040	Cucumber (Chinese Long) v2	cmacuB605
CmaCh02G011650	MELO3C014728	Melon (DHL92) v3.5.1	cmameB572
CmaCh02G011650	CSPI04G12510	Wild cucumber (PI 183967)	cmacpiB612
CmaCh02G011650	CmoCh02G011980	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G011650	Lsi10G009170	Bottle gourd (USVL1VR-Ls)	cmalsiB540
CmaCh02G011650	Cp4.1LG05g05640	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G011650	MELO3C014730.2	Melon (DHL92) v3.6.1	cmamedB654
CmaCh02G011650	CsaV3_4G017550	Cucumber (Chinese Long) v3	cmacucB0728
CmaCh02G011650	Cla97C02G050670	Watermelon (97103) v2	cmawmbB629
CmaCh02G011650	Bhi10G000402	Wax gourd	cmawgoB0757
CmaCh02G011650	Carg13977	Silver-seed gourd	carcmaB0716

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G011650	Cucurbita maxima (Rimu)	cmacmaB470
CmaCh02G011650	Cucurbita moschata (Rifu)	cmacmoB607
CmaCh02G011650	Watermelon (Charleston Gray)	cmawcgB541
CmaCh02G011650	Watermelon (97103) v1	cmawmB592
CmaCh02G011650	Cucurbita pepo (Zucchini)	cmacpeB627
CmaCh02G011650	Cucumber (Gy14) v2	cgybcmaB527