Lsi10G008300 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G008300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Ser/Thr-rich T10 in DGCR region
Location	chr10 : 11741321 .. 11744675 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAGGGCCCATTTTTACCAATTTCGGCCCTGGACCACGAGCCGCCACAGATGCCGGCAAGAGCTCAAGGCAGTGGCGATTGCGGTTGGAGGATTTTCTGTAAAATGAAGGGCTAGCTCGCGTAGGGTCGTCGGTCGAATCTCTACCTCCGTTTGTCAGGTCCAATTCGTCATGTGCATAGCAGCGTTTCTATGGAAAGCTCACCCGCAATATCCATTACTCTTACTGCTAAACCGTGACGAATATCGCAGTAGGTCCGTCCAATTTTAATGGTGTTTTCCTTGGGGGAATTGGTCGATAGTTCCAAATTTTGTGAAATTAATTTGGTTTGACATGTTTAGGCCCACGAAGCCGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGGGTTGGCCGGCGGGACGTGGCTGGCTTGCTCGAGAAATGGCAGAGTTGCATTCATCACAAATTTCAGGGAAGTTCAGTCGCTTCCTCAGGCTAAGAGCAGGGGAGAGCTCCCCGTTCGTTTCTTGAAAGTAAGATAGATTTGGGTATCGTATCACTAGTTTCATAAAACTACTTAGAAATATCATTGTACTGCAGCGTTGCTATTATCAAGATTTGAAACTTGAGAGTTAAAAGAGGCACGAAACTGGAATTTGAATCCGTCGAAGGGTATGGTTAACCTGTTTTGGTCGCTTAAATCTGCAAACTTGTACATTAGGAAAATTATGCGCAGGAAAGTACAGCTGCAAGCAGACCTTACGAAAGATTGCAAACCAATCTTACCAATAATAAAGGAGCTGTTGGTTTTGTTTAGTGTGTTGTGTACTGGTGAATAGAAAAAGATGATTGAAGCTACAACATGCTAGTTTTGTTTGTTCTATGTTATAGTGAACAAGAAAAGTGAAGAGAAAAGGTGACTGAAATTACTAATAATGGGTGGAGATTGAAGATAGAACATGCTAATTTTGTTCGCTCTGTGTACTAGTAGTGAATAGGATAAATCTGATTGAATTCTTAACTGTTGAAGATAAAACATGTTAGTTTTGTTTGTTCTGTGTACTAGTGAGTAGGAAAAGCTAATTGAATTCTTAAAGGTGGGTGAAGATTGAAGATGGAACATGTTAGTTTTGTTTGTGTTGTGTTACTAGTGAATAGGAAAAGTCTAAAGTATGCTAATGATTGATGTAGATTGAAGATAGAAATGTTTGGTACTTTGCCCTTATCTCTCTCATCAGAGACTACAAAATATGGTCCTTCTTATTGGGAATAAGGACGTGGAATGGACATAGTCAGACTTACTTTAGAGAAGTGGACATATGTAAGAGCAGCATCATCTTCAAGAAATATAAGTATAGTTCAAGAGATCTCTGACATCCAAGTCATCTCAAAGATTCTTAGGTCAAGAGAGATGAACATGCACTGCATTTTATTACCTTCAAACCAAACCAAACCGAAATTTCCGAAAGTAGAGATAGAATTGTAGAACTTAAATAACTCAGATGAGATCTCTGTGAGATGATGATCCCATAAAAATGAGAGGGATTGAAGAAGGCACCAAATGAATGCAGACACCACCTTTCATATGATAACCGTCTTCATGAAGGATTTATAAAAAAAATCCATAAATAAGAAATTCCTAGACGTGAACTCTCTCATTAGGGCATTAGCAAGGAAAATCCTGCCCATGGATTTCACTGAACTCATCCACATGACAATGGGTATAATTTGCCATTGCCACCGCAGTTTTTTCATTGAACTCTTTCATTAGGGCATTAGCAAGGAAAATCCTGCCCATGGATTTCACTGAACTCATCAACATGACAATGGGTATAATTTGCCATTGCCACCGCAGTTTTTTCAGTGTAAGTATCATTACTGTTAGAATGTTGATTTTCCTGTGTTTTTGTTTTCGTAGAGCCAGAAGAGTCCACTTGACTTCGCCAAAGAAGTTGCAAAGGAAGCACACCAGTACAACGGTTTCAACTTAATAATTGCTGACATTTCCTCCAAAACCATGTCTTATATCACCAACAGACAAACAAATGCTGACAGCCTTGTCACTGAGGTTTCCCCCGGCATTCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAAGGTAGGAAAGAAATATCTCAATTTCCTTTGGTAAAGTTTCTATGTAACTTTTTAGTTTTGCATTTAGCAGCTATTTAACAGGGAACTTCCCAATTTTCTTTGGCAGTAATTTAACATGGTATCAATCTAGGACCTTGTTTTTATATTCAAATTCAAACTGTAAAGAAAGTGTGAAAAAACATAAATAAATGGTTGGCTAAAAGCCTGGGTTATGTAGCTTCAGTTTGGAGGCTCATTAAACAAATTTCCCTAATGTTTAGGCACAACGACTGGATCAGAGTTTCAGAGAGCTTATAAACAAAAATGAGGACAGGGAACTTTCAGCAGAAGAGATGGTTGAAAAGCTAATGACCAACACGGTTAAAGACGACGTGAGCTTGCTACCTGGCATCTATTCTCCTCGAACGGAATATCAATATAGTTCCATATTTGTTGATACAGACACCGAGCTGGTAAAACGAAAGGGTCATTTTGTTAGCTTTTTTAGAGATATGCATGGAGATTCTGAAATGGGTTTGCTCCATTGTTGCATAGGGCCGTTTTGGAACTGGAAGCATATCTGTTTTGTCCGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCATTTGGAGAACGATGCATGGATTGACAACCATTTTACTTTCCAGATTGAGAACGTCTAAATCCTGCTCAAGGTTAGTTTGGTTCGATAATGTTAAGCTTCTTTTTTCTTGTTATGAAGACTTGAAAGGCGAAAGGAAATTGTATAGAAGGGTTAAAGAATACGTCTATAAAGGATTGAAAATTAGAATTGATCAAGGGCCCTTTCTTATTCAGGTGGTGCTGGTTCAAATTATTATTTATCTTCGGTATTCATTTCGTCTTCATGTATAAAATGGGTGGTATATGTTCTGCAGCTTCCATGTGGTCTGTATTTGAACCTAAAGGCTTGTTTTCTTTGGACTAATGCAGTCAAAGTCATTCTTTCTTATAGATTGAATCAATCATTCTTTCTGAGTTATAGATTGAAAGAAATCAACGTATTTTTCAGGGAAAGCTTGTTTGTGTGTTGCAAGTTTTGAATAAGCTCCTTTAAAGACTTCCTCATGGTGTTCTATTACCAAAAGATGTAAAGGGGTTTCCACACAAGACATTAGTTGTATTTTATTTACTTTTGTTAATGGCCACTTTGTCACCCTTGTATCTTGGAGCCTCAGAAATTTTGGATCAATTAGAAATTGCCACATCATTGCTC

mRNA sequence

TTTTAGGGCCCATTTTTACCAATTTCGGCCCTGGACCACGAGCCGCCACAGATGCCGGCAAGAGCTCAAGGCAGTGGCGATTGCGGTTGGAGGATTTTCTGTAAAATGAAGGGCTAGCTCGCGTAGGGTCGTCGGTCGAATCTCTACCTCCGTTTGTCAGGTCCAATTCGTCATGTGCATAGCAGCGTTTCTATGGAAAGCTCACCCGCAATATCCATTACTCTTACTGCTAAACCGTGACGAATATCGCAGTAGGCCCACGAAGCCGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGGGTTGGCCGGCGGGACGTGGCTGGCTTGCTCGAGAAATGGCAGAGTTGCATTCATCACAAATTTCAGGGAAGTTCAGTCGCTTCCTCAGGCTAAGAGCAGGGGAGAGCTCCCCGTTCGTTTCTTGAAAATTGAAGATAGAAATGTTTGGGCATTAGCAAGGAAAATCCTGCCCATGGATTTCACTGAACTCATCAACATGACAATGGGTATAATTTGCCATTGCCACCGCAGTTTTTTCAGTAGCCAGAAGAGTCCACTTGACTTCGCCAAAGAAGTTGCAAAGGAAGCACACCAGTACAACGGTTTCAACTTAATAATTGCTGACATTTCCTCCAAAACCATGTCTTATATCACCAACAGACAAACAAATGCTGACAGCCTTGTCACTGAGGTTTCCCCCGGCATTCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCACAACGACTGGATCAGAGTTTCAGAGAGCTTATAAACAAAAATGAGGACAGGGAACTTTCAGCAGAAGAGATGGTTGAAAAGCTAATGACCAACACGGTTAAAGACGACGTGAGCTTGCTACCTGGCATCTATTCTCCTCGAACGGAATATCAATATAGTTCCATATTTGTTGATACAGACACCGAGCTGGGCCGTTTTGGAACTGGAAGCATATCTGTTTTGTCCGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCATTTGGAGAACGATGCATGGATTGACAACCATTTTACTTTCCAGATTGAGAACGTCTAAATCCTGCTCAAGGGAAAGCTTGTTTGTGTGTTGCAAGTTTTGAATAAGCTCCTTTAAAGACTTCCTCATGGTGTTCTATTACCAAAAGATGTAAAGGGGTTTCCACACAAGACATTAGTTGTATTTTATTTACTTTTGTTAATGGCCACTTTGTCACCCTTGTATCTTGGAGCCTCAGAAATTTTGGATCAATTAGAAATTGCCACATCATTGCTC

Coding sequence (CDS)

ATGTGCATAGCAGCGTTTCTATGGAAAGCTCACCCGCAATATCCATTACTCTTACTGCTAAACCGTGACGAATATCGCAGTAGGCCCACGAAGCCGCTGGAATGGTGGGAATGTGGCGAAATTTTGGGCGGAAGAGATGGGTTGGCCGGCGGGACGTGGCTGGCTTGCTCGAGAAATGGCAGAGTTGCATTCATCACAAATTTCAGGGAAGTTCAGTCGCTTCCTCAGGCTAAGAGCAGGGGAGAGCTCCCCGTTCGTTTCTTGAAAATTGAAGATAGAAATGTTTGGGCATTAGCAAGGAAAATCCTGCCCATGGATTTCACTGAACTCATCAACATGACAATGGGTATAATTTGCCATTGCCACCGCAGTTTTTTCAGTAGCCAGAAGAGTCCACTTGACTTCGCCAAAGAAGTTGCAAAGGAAGCACACCAGTACAACGGTTTCAACTTAATAATTGCTGACATTTCCTCCAAAACCATGTCTTATATCACCAACAGACAAACAAATGCTGACAGCCTTGTCACTGAGGTTTCCCCCGGCATTCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAAGGCACAACGACTGGATCAGAGTTTCAGAGAGCTTATAAACAAAAATGAGGACAGGGAACTTTCAGCAGAAGAGATGGTTGAAAAGCTAATGACCAACACGGTTAAAGACGACGTGAGCTTGCTACCTGGCATCTATTCTCCTCGAACGGAATATCAATATAGTTCCATATTTGTTGATACAGACACCGAGCTGGGCCGTTTTGGAACTGGAAGCATATCTGTTTTGTCCGTGAAGAACAGTGGGGAAGCTTCCTTCTTTGAGAGGCATTTGGAGAACGATGCATGGATTGACAACCATTTTACTTTCCAGATTGAGAACGTCTAA

Protein sequence

MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNGRVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICHCHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSPGIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGIYSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQIENV

Homology

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BLAST of Lsi10G008300 vs. Swiss-Prot
Match: TNG2_HUMAN (Transport and Golgi organization protein 2 homolog OS=Homo sapiens GN=TANGO2 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.1e-15
Identity = 79/301 (26.25%), Postives = 127/301 (42.19%), Query Frame = 1


Query: 1   MCIAAFLWKAHP----QYPLLLLLNRDEYRSRPTKPLEWW-ECGEILGGRD---GLAGGT 60
           MCI  F +   P     Y L+L  NRDE+ SRP+K  ++W    EIL G D   G  GGT
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60

Query: 61  WLACSRNGRVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELIN 120
           WL                        +RG+L      ++ +  W    +       EL+ 
Sbjct: 61  WLGI---------------------STRGKLAALTNYLQPQLDWQARGR------GELVT 120

Query: 121 MTMGIICHCHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNAD 180
                       F ++    L + K+V+ E H YNGFNLI AD+S+     I       +
Sbjct: 121 -----------HFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGE 180

Query: 181 SLVTEVSPGIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKD 240
                ++PG + L+NA L++PW K     Q F E + +++   L  + ++  L+     +
Sbjct: 181 PDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVERSQ--ALPKDVLIASLLDVLNNE 240

Query: 241 DVSLL-PGIYSPRTEY------QYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERH 287
           +  L  P I     EY      +Y+++ V        +GT + +++ V   G  +F ER 
Sbjct: 241 EAQLPDPAIEDQGGEYVQPMLSKYAAVCV----RCPGYGTRTNTIILVDADGHVTFTERS 257

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BLAST of Lsi10G008300 vs. Swiss-Prot
Match: TNG2_BOVIN (Transport and Golgi organization protein 2 homolog OS=Bos taurus GN=TANGO2 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14
Identity = 80/299 (26.76%), Postives = 127/299 (42.47%), Query Frame = 1


Query: 1   MCIAAFLWKAHP----QYPLLLLLNRDEYRSRPTKPLEWWECG-EILGGRDGLAGGTWLA 60
           MCI  F +   P     Y L+L  NRDE+  RP +  ++W    E+L G D         
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYHRPARAADFWGSNNEVLSGLD--------- 60

Query: 61  CSRNGRVAFITNFREVQSLPQAKSRGELPVRFLKIEDR-NVWALARKILPMDFTELINMT 120
                    +   +E  +     +RG+L      ++ R N  A  R        EL+   
Sbjct: 61  ---------MEEGKEGGTWLGISTRGKLAALTNYLQPRLNRNARGRG-------ELV--- 120

Query: 121 MGIICHCHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSL 180
                     F +S    L + K+V+ E H YNGFNLI AD+S++    I       +  
Sbjct: 121 --------AQFLTSDMDSLSYLKKVSAEGHLYNGFNLIAADLSAEKGDVICYYGNRGERE 180

Query: 181 VTEVSPGIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDV 240
              ++PG + L+NA L++PW K     Q F E + +   REL  + +V +L+     D+ 
Sbjct: 181 PVVLAPGTYGLSNALLETPWRKLCFGKQLFLEAVERG--RELPRDALVAQLLAVLSNDEA 240

Query: 241 SLL-PGIYSPRTEY------QYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHL 287
            L  P I +   EY      +Y+++ V        +GT + +V+ V   G  +F ER +
Sbjct: 241 QLPDPAIEAQGREYVRPILSKYAAVCV----RCPDYGTRTSTVILVDADGHVTFTERSM 257

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BLAST of Lsi10G008300 vs. Swiss-Prot
Match: TNG2_MOUSE (Transport and Golgi organization 2 homolog OS=Mus musculus GN=Tango2 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 78/318 (24.53%), Postives = 136/318 (42.77%), Query Frame = 1


Query: 1   MCIAAFLWKAHP----QYPLLLLLNRDEYRSRPTKPLEWW-ECGEILGGRDGLAGGTWLA 60
           MCI  F +   P     Y L+L  NRDE+ +RP+K  ++W    EIL G D         
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYNRPSKLADFWGNNSEILSGLD--------- 60

Query: 61  CSRNGRVAFITNFREVQSLPQAKSRGELPVRFLKIEDRN-VWALARKILPMDFTELINMT 120
                             + + K+ G     +L I  R  + AL   + P    +     
Sbjct: 61  ------------------MEEGKAGGT----WLGISTRGKLGALTNYLQPRQEPDARGRG 120

Query: 121 MGIICHCHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSL 180
             ++ H    F +S    L + K+V+ E H YNGFN+I AD+S+     +       +  
Sbjct: 121 E-LVSH----FLTSDMDSLSYLKKVSTEGHLYNGFNIIAADLSTSKGDVVCYYGNRGEPE 180

Query: 181 VTEVSPGIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDV 240
              ++PG + L+NA L++PW K     Q F E + ++E   L  + +V +L+     ++ 
Sbjct: 181 PIVLTPGTYGLSNALLETPWKKLCFGKQLFMEAVEQSE--ALPKDVLVTQLLDVLNNEEA 240

Query: 241 SLL-PGIYSPRTEY------QYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHL- 300
            L  P I     EY      +Y++++         +GT + +++ V  +G  +F ER + 
Sbjct: 241 QLPDPAIEDQGQEYVQPILNKYAAVW----CRCASYGTRTNTIILVDANGHVTFTERSML 276

Query: 301 --ENDAWIDNHFTFQIEN 303
             +   W  N + F +++
Sbjct: 301 DKDTSRWETNTYEFTLQS 276

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BLAST of Lsi10G008300 vs. Swiss-Prot
Match: YG37_YEAST (Uncharacterized protein YGR127W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR127W PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.0e-06
Identity = 37/100 (37.00%), Postives = 51/100 (51.00%), Query Frame = 1


Query: 1  MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAG--------GT 60
          MCI     +AHP Y L+L+ NRDE+ +R T    W     IL   D LA         GT
Sbjct: 1  MCIL-MATRAHPDYELILISNRDEFLARKTHATCWHNNDFILSPYD-LAKTSAEKQIFGT 60

Query: 61 WLACSRNGRVAFITNFR--EVQSLPQAKSRGELPVRFLKI 91
          W   ++ G++A I N +    Q+  +++SRG LP  FL I
Sbjct: 61 WSGINKEGKLATILNLKLDNEQNNTKSRSRGLLPFIFLSI 98

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BLAST of Lsi10G008300 vs. TrEMBL
Match: D7U4R9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03840 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.2e-91
Identity = 176/303 (58.09%), Postives = 212/303 (69.97%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA FLW+AHP YP LLLLNRDEY +RPT+ L WW+ GEILGGRDGLAGGTWLACSR+G
Sbjct: 1   MCIAVFLWQAHPIYPFLLLLNRDEYHNRPTEALAWWQGGEILGGRDGLAGGTWLACSRDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           R+AF+TN REV  +P+AKSRG+L VRFL+           K  PM+F E           
Sbjct: 61  RLAFLTNVREVHPIPEAKSRGDLIVRFLE----------SKKNPMEFAE----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            EV KEA +YNGFNLIIAD+ SKTM YITNR   A+  V EVSP
Sbjct: 121 -----------------EVMKEADKYNGFNLIIADLCSKTMIYITNRPREANVSVVEVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVL+NA LDSPWPKA+RL  +F+EL++K  + E+  EEMVEKLM NT+KDD  +LP I
Sbjct: 181 GIHVLSNASLDSPWPKARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRI 240

Query: 241 YSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQI 300
           Y P  E+Q SSIFVDTDT LGR+GT S S + V+ SGE +F+E+HLEN+ W +N  T+QI
Sbjct: 241 YPPEREHQLSSIFVDTDTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQI 265

Query: 301 ENV 304
           E +
Sbjct: 301 ERM 265

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BLAST of Lsi10G008300 vs. TrEMBL
Match: A0A061E3G6_THECC (Ser/Thr-rich protein T10 in DGCR region, putative isoform 1 OS=Theobroma cacao GN=TCM_007562 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.6e-88
Identity = 171/315 (54.29%), Postives = 215/315 (68.25%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRS---------RPTKPLEWWECGEILGGRDGLAGG 60
           MCIA F+W+AHP YP LL LNRDEY S         RPT+PL WWE GEILGGRDG AGG
Sbjct: 1   MCIAVFMWEAHPVYPFLLFLNRDEYHSSPTTLLGVSRPTEPLGWWEGGEILGGRDGEAGG 60

Query: 61  TWLACSRNGRVAFITNFREVQSLPQAKSRGELPVRFLKI-----EDRNVWALARKILPMD 120
           TWLA SR+GR+AFITN RE+QS+P+AKSRG LPVRFL+I     E    W    K++P  
Sbjct: 61  TWLAFSRDGRLAFITNVRELQSIPRAKSRGHLPVRFLQISTSPCEALQDWKGQLKLVPSF 120

Query: 121 FTELINMTMGIICHCHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITN 180
           F       MG    C      S+K P++FA+EV KEA++YNGFNLI+ D+ SK+M Y+TN
Sbjct: 121 FNCQSKDYMG---SCLGELLGSKKKPIEFAEEVVKEANEYNGFNLILIDLCSKSMVYVTN 180

Query: 181 RQTNADSLVTEVSPGIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLM 240
           R     + VTEVSPGIHVL+NA L+SPWPKAQRL  SF+E++ +  + EL  +E V +L+
Sbjct: 181 RPKENGNFVTEVSPGIHVLSNASLNSPWPKAQRLGHSFKEVLARYGEDELPLKETVAELL 240

Query: 241 TNTVKDDVSLLPGIYSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHL 300
            +  KDD S+LPGI+ P  EY  SSI++D     GR+GT + S LSVK++GE  F ER+L
Sbjct: 241 MDRTKDDSSMLPGIFPPEVEYHLSSIYIDVSRPQGRYGTRNQSALSVKSNGEVCFHERYL 300

Query: 301 ENDAWIDNHFTFQIE 302
           E D W +   T+QIE
Sbjct: 301 EKDLWKEQTVTYQIE 312

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BLAST of Lsi10G008300 vs. TrEMBL
Match: V4SA16_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029078mg PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-86
Identity = 167/301 (55.48%), Postives = 201/301 (66.78%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA F+W+AHP YP LLL NRDEY SRPTKPL WWE  EILGGRD  AGGTWLA + +G
Sbjct: 1   MCIAVFMWQAHPLYPFLLLFNRDEYHSRPTKPLGWWEGAEILGGRDEKAGGTWLASTTDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           + AF+TNFREVQS+PQAKSRGELPVRFL+ + +          P+DF E           
Sbjct: 61  KFAFLTNFREVQSIPQAKSRGELPVRFLQSKKK----------PLDFAE----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            E+  EA QYNGFNL+I +I SK+M Y+TNR     S+ TEVSP
Sbjct: 121 -----------------EILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVLTNA LDSPWPKAQRL  +F+EL++K  + EL  +EM ++LM +T KDD  LLP I
Sbjct: 181 GIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPDI 240

Query: 241 YSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQI 300
           Y P TE   SSIF+DT+  LGR+GT S S L VK++GE  F+ERHLE D W +    +QI
Sbjct: 241 YPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQI 263

Query: 301 E 302
           E
Sbjct: 301 E 263

[Close]

BLAST of Lsi10G008300 vs. TrEMBL
Match: A0A0B0NE22_GOSAR (Ser/Thr-rich T10 in DGCR region OS=Gossypium arboreum GN=F383_14615 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.2e-85
Identity = 163/301 (54.15%), Postives = 206/301 (68.44%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA F+W+ HP YP +L LNRDEY +RPT+PL WWE GEILGGRDG AGGTWLA SR+G
Sbjct: 1   MCIAVFMWETHPLYPFILFLNRDEYHNRPTEPLIWWEGGEILGGRDGQAGGTWLASSRDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           R+AFITNFRE QS+PQAK                    +R  LP+DF +           
Sbjct: 61  RLAFITNFREFQSIPQAK--------------------SRGNLPVDFLQ----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                  S+K P++FA+EV KEA QYNGFNLI+ D+ SK+M Y+TNR     + VT+VSP
Sbjct: 121 -------SKKKPIEFAEEVVKEADQYNGFNLILVDVRSKSMVYLTNRPEKTGNFVTQVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVL+NA LDSPW KAQRLD +F+E++ +    EL  +EMV +LM +T KDD+SLLP I
Sbjct: 181 GIHVLSNANLDSPWLKAQRLDHNFKEVLARYGKDELPLKEMVGQLMMDTTKDDLSLLPHI 240

Query: 241 YSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQI 300
           YSP TEY  S+I++DT    GR+GT S S L+VK++GE  F+ER+L+ D W +N  T+QI
Sbjct: 241 YSPETEYDLSAIYIDTTRPQGRYGTRSQSALTVKSNGEVCFYERYLDKDRWKENTVTYQI 263

Query: 301 E 302
           E
Sbjct: 301 E 263

[Close]

BLAST of Lsi10G008300 vs. TrEMBL
Match: M5VKU7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009885mg PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 169/303 (55.78%), Postives = 206/303 (67.99%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA F+W+ HP YPLLLL NRDE++SRPTKPL WWE G+ILGGRDGLAGGTWLAC+R+G
Sbjct: 1   MCIAVFVWQNHPIYPLLLLFNRDEFKSRPTKPLAWWEGGKILGGRDGLAGGTWLACTRDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           +VAFITN REV+ L QAKSRG+LPVRFL+           K   M+F E           
Sbjct: 61  KVAFITNVREVEKLAQAKSRGDLPVRFLE----------GKKSAMEFAEE---------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                             VA+EA QYNGFNLI+AD+ SK M Y+TNR     S VTEVSP
Sbjct: 121 ------------------VAEEAGQYNGFNLILADLCSKAMVYVTNRPKEDKSFVTEVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKN-EDRELSAEEMVEKLMTNTVKDD-VSLLP 240
           GIHVL+NAQLDSPWPK QRL  SF+EL++++  D +L  +EMVEKLM NT+KDD  SLLP
Sbjct: 181 GIHVLSNAQLDSPWPKVQRLGDSFKELLHEHGGDNDLPIKEMVEKLMMNTIKDDEESLLP 240

Query: 241 GIYSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTF 300
            +Y P  EY  SSIFV+   +LG +GT S S L VK SGE  ++ER+LEN+ W +   T+
Sbjct: 241 HVYPPELEYHLSSIFVEKAPQLGHYGTRSTSALCVKTSGEVIYYERYLENELWKEGTVTY 265

Query: 301 QIE 302
            ++
Sbjct: 301 HMD 265

[Close]

BLAST of Lsi10G008300 vs. TAIR10
Match: AT4G38260.1 (AT4G38260.1 Protein of unknown function (DUF833))

HSP 1 Score: 281.6 bits (719), Expect = 5.8e-76
Identity = 147/307 (47.88%), Postives = 191/307 (62.21%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA FLW++HP YP LL LNRDE  +R T+ L WWE GE +GGRD + GGTWL C+R+G
Sbjct: 1   MCIAVFLWQSHPLYPFLLFLNRDEDHNRATEALRWWEDGETVGGRDLVGGGTWLGCTRHG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           R+AF+TNF+E  S P AKSRG+LP+R+L+ E            P +F E           
Sbjct: 61  RLAFLTNFKEASSFPAAKSRGDLPLRYLQSEKS----------PAEFAE----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            E+  E   YNGFNL++A + SK+M YITNR  + D LVT+VSP
Sbjct: 121 -----------------EIQDEISLYNGFNLVVAHVLSKSMIYITNRPPHGDKLVTQVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVL+NA LDSPWPK  RL + F++L+ +N   E   + MVE++MTNTVKD+ + LP +
Sbjct: 181 GIHVLSNANLDSPWPKCLRLREGFQQLLAENGSGEFPVKTMVEEVMTNTVKDEETELPHV 240

Query: 241 YSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKN------SGEASFFERHL-ENDAWID 300
           ++P TEY  SSIFVD     GR+GT SIS + VK+       GE  F+ERHL E D+W +
Sbjct: 241 FTPETEYHLSSIFVDMQRPTGRYGTRSISAIIVKSHGDGGGDGEICFYERHLEEGDSWKE 269

[Close]

BLAST of Lsi10G008300 vs. TAIR10
Match: AT1G20730.1 (AT1G20730.1 Protein of unknown function (DUF833))

HSP 1 Score: 95.1 bits (235), Expect = 7.8e-20
Identity = 99/309 (32.04%), Postives = 134/309 (43.37%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEW-WECGEILGGRDGLAGGTWLACSRN 60
           M I AF W    +  L LL NR+ ++SR      W W+  ++L GR     GTWL  S  
Sbjct: 1   MGIVAFQW-GEGENILTLLQNRENWQSRSIGKAAWEWDESQVLSGRCAETDGTWLGISIR 60

Query: 61  GRVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIIC 120
           GRVAF+     V                    DR + A  R +                 
Sbjct: 61  GRVAFLVEAGPVN------------------RDRIIGAECRTLD---------------- 120

Query: 121 HCHRSFFSSQKSPLDFAKEVAKEAHQYNG--FNLIIADISSKTMSYITNRQTNADSLV-T 180
                F  S  SP DFA  +A ++ +  G  ++LI+ADI S +M YI     + D +V T
Sbjct: 121 -----FLKSNLSPEDFADSLALDSGRNTGIAYHLIVADIVSNSMFYIYKPSLSEDGMVYT 180

Query: 181 E-VSPGIHVLTNAQLDSP-WPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDV 240
           E V PG+H L++A LDS    +  RL + F E IN    REL   E +  L    + D V
Sbjct: 181 EPVGPGVHTLSSAGLDSEVGHRDLRLKRYFSERIN----REL--PEPISGLAEEVMYDTV 240

Query: 241 SLLPGIYSPRTEYQYSSIF-VDTDTELGRFGTGSISVLSVKNSGEASFFERHLE--NDAW 300
             + G          SSIF VDT  E   +GT   + L V+ + +  FFER+    ND W
Sbjct: 241 EAING-------DPLSSIFVVDTLIENEHYGTRCTTALVVRRTMQVRFFERYRARFNDDW 256

[Close]

BLAST of Lsi10G008300 vs. TAIR10
Match: AT1G20740.1 (AT1G20740.1 Protein of unknown function (DUF833))

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 65/184 (35.33%), Postives = 93/184 (50.54%), Query Frame = 1


Query: 125 FFSSQKSPLDFAKEVAKEAHQYNG---FNLIIADISSKTMSYITN-RQTNADSLVTE-VS 184
           F  S +SP DFAK  A +  +      F+LI+ADI+S +M YI+  R ++   + TE V 
Sbjct: 95  FLESNESPEDFAKSSAADYIRNKNTAAFHLIVADIASNSMLYISKPRFSDYGIVYTEPVG 154

Query: 185 PGIHVLTNAQLDSP-WPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLP 244
           PG+H L++A LDS    +  R+  SF E+IN+     L     + ++M + VK   S+L 
Sbjct: 155 PGVHTLSSAGLDSDVGYRDLRMRHSFCEMINR---ERLPPIRDIAEIMYDPVKAYESVLL 214

Query: 245 GIYSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLE--NDAWIDNHF 301
                      S  FVD       +GT   + L VK + E  FFER+ E  ND W D+ F
Sbjct: 215 S----------SIFFVDMKIGYEHYGTRITTALVVKRTKEVLFFERYREIFNDDWDDHDF 265

[Close]

BLAST of Lsi10G008300 vs. NCBI nr
Match: gi|359474959|ref|XP_003631559.1| (PREDICTED: transport and Golgi organization 2 homolog [Vitis vinifera])

HSP 1 Score: 343.2 bits (879), Expect = 4.6e-91
Identity = 176/303 (58.09%), Postives = 212/303 (69.97%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA FLW+AHP YP LLLLNRDEY +RPT+ L WW+ GEILGGRDGLAGGTWLACSR+G
Sbjct: 1   MCIAVFLWQAHPIYPFLLLLNRDEYHNRPTEALAWWQGGEILGGRDGLAGGTWLACSRDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           R+AF+TN REV  +P+AKSRG+L VRFL+           K  PM+F E           
Sbjct: 61  RLAFLTNVREVHPIPEAKSRGDLIVRFLE----------SKKNPMEFAE----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            EV KEA +YNGFNLIIAD+ SKTM YITNR   A+  V EVSP
Sbjct: 121 -----------------EVMKEADKYNGFNLIIADLCSKTMIYITNRPREANVSVVEVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVL+NA LDSPWPKA+RL  +F+EL++K  + E+  EEMVEKLM NT+KDD  +LP I
Sbjct: 181 GIHVLSNASLDSPWPKARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRI 240

Query: 241 YSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQI 300
           Y P  E+Q SSIFVDTDT LGR+GT S S + V+ SGE +F+E+HLEN+ W +N  T+QI
Sbjct: 241 YPPEREHQLSSIFVDTDTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQI 265

Query: 301 ENV 304
           E +
Sbjct: 301 ERM 265

[Close]

BLAST of Lsi10G008300 vs. NCBI nr
Match: gi|1009150541|ref|XP_015893071.1| (PREDICTED: transport and Golgi organization protein 2 homolog isoform X1 [Ziziphus jujuba])

HSP 1 Score: 339.0 bits (868), Expect = 8.8e-90
Identity = 174/302 (57.62%), Postives = 210/302 (69.54%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA FLW+AHP YP LLLLNRDEY SRPT+PL WW+ GEILGGRDGLAGGTWLACSR+G
Sbjct: 1   MCIAVFLWRAHPVYPFLLLLNRDEYHSRPTEPLAWWDGGEILGGRDGLAGGTWLACSRDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           R+AF+TN REVQ +PQAK+RG+LPV FLK           K  PM+F E           
Sbjct: 61  RLAFLTNVREVQLIPQAKTRGDLPVLFLK----------SKKSPMEFAE----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            EV K+A QYNGFNLI+AD+ +KTM Y+TNRQ   + LV +V P
Sbjct: 121 -----------------EVVKDADQYNGFNLILADLCAKTMVYVTNRQKEGEKLVADVLP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVLTNA+LDSPWPKAQRL  +F+EL++K  D E   +EMVEKLMT+T KD+ S LP I
Sbjct: 181 GIHVLTNARLDSPWPKAQRLRDNFKELVHKYGDGEFPIKEMVEKLMTDTTKDEESPLPHI 240

Query: 241 YSPRTEYQYSSIFVDTDTE-LGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQ 300
           YSP  EY  SSIFVD +T  LG +GT S S +SVK +GE SF+E++LEN+ W +    ++
Sbjct: 241 YSPSREYYLSSIFVDEETNPLGHYGTRSTSAVSVKTNGEVSFYEKYLENEEWKEQTVIYR 264

Query: 301 IE 302
           IE
Sbjct: 301 IE 264

[Close]

BLAST of Lsi10G008300 vs. NCBI nr
Match: gi|590688843|ref|XP_007043060.1| (Ser/Thr-rich protein T10 in DGCR region, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 333.6 bits (854), Expect = 3.7e-88
Identity = 171/315 (54.29%), Postives = 215/315 (68.25%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRS---------RPTKPLEWWECGEILGGRDGLAGG 60
           MCIA F+W+AHP YP LL LNRDEY S         RPT+PL WWE GEILGGRDG AGG
Sbjct: 1   MCIAVFMWEAHPVYPFLLFLNRDEYHSSPTTLLGVSRPTEPLGWWEGGEILGGRDGEAGG 60

Query: 61  TWLACSRNGRVAFITNFREVQSLPQAKSRGELPVRFLKI-----EDRNVWALARKILPMD 120
           TWLA SR+GR+AFITN RE+QS+P+AKSRG LPVRFL+I     E    W    K++P  
Sbjct: 61  TWLAFSRDGRLAFITNVRELQSIPRAKSRGHLPVRFLQISTSPCEALQDWKGQLKLVPSF 120

Query: 121 FTELINMTMGIICHCHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITN 180
           F       MG    C      S+K P++FA+EV KEA++YNGFNLI+ D+ SK+M Y+TN
Sbjct: 121 FNCQSKDYMG---SCLGELLGSKKKPIEFAEEVVKEANEYNGFNLILIDLCSKSMVYVTN 180

Query: 181 RQTNADSLVTEVSPGIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLM 240
           R     + VTEVSPGIHVL+NA L+SPWPKAQRL  SF+E++ +  + EL  +E V +L+
Sbjct: 181 RPKENGNFVTEVSPGIHVLSNASLNSPWPKAQRLGHSFKEVLARYGEDELPLKETVAELL 240

Query: 241 TNTVKDDVSLLPGIYSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHL 300
            +  KDD S+LPGI+ P  EY  SSI++D     GR+GT + S LSVK++GE  F ER+L
Sbjct: 241 MDRTKDDSSMLPGIFPPEVEYHLSSIYIDVSRPQGRYGTRNQSALSVKSNGEVCFHERYL 300

Query: 301 ENDAWIDNHFTFQIE 302
           E D W +   T+QIE
Sbjct: 301 EKDLWKEQTVTYQIE 312

[Close]

BLAST of Lsi10G008300 vs. NCBI nr
Match: gi|567859542|ref|XP_006422425.1| (hypothetical protein CICLE_v10029078mg [Citrus clementina])

HSP 1 Score: 327.8 bits (839), Expect = 2.0e-86
Identity = 167/301 (55.48%), Postives = 201/301 (66.78%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIA F+W+AHP YP LLL NRDEY SRPTKPL WWE  EILGGRD  AGGTWLA + +G
Sbjct: 1   MCIAVFMWQAHPLYPFLLLFNRDEYHSRPTKPLGWWEGAEILGGRDEKAGGTWLASTTDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           + AF+TNFREVQS+PQAKSRGELPVRFL+ + +          P+DF E           
Sbjct: 61  KFAFLTNFREVQSIPQAKSRGELPVRFLQSKKK----------PLDFAE----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            E+  EA QYNGFNL+I +I SK+M Y+TNR     S+ TEVSP
Sbjct: 121 -----------------EILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVKDDVSLLPGI 240
           GIHVLTNA LDSPWPKAQRL  +F+EL++K  + EL  +EM ++LM +T KDD  LLP I
Sbjct: 181 GIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPDI 240

Query: 241 YSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQI 300
           Y P TE   SSIF+DT+  LGR+GT S S L VK++GE  F+ERHLE D W +    +QI
Sbjct: 241 YPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQI 263

Query: 301 E 302
           E
Sbjct: 301 E 263

[Close]

BLAST of Lsi10G008300 vs. NCBI nr
Match: gi|694396241|ref|XP_009373407.1| (PREDICTED: transport and Golgi organization protein 2 homolog [Pyrus x bretschneideri])

HSP 1 Score: 327.8 bits (839), Expect = 2.0e-86
Identity = 171/301 (56.81%), Postives = 207/301 (68.77%), Query Frame = 1


Query: 1   MCIAAFLWKAHPQYPLLLLLNRDEYRSRPTKPLEWWECGEILGGRDGLAGGTWLACSRNG 60
           MCIAAF+W+ HP YP LLLLNRDE+ SRPT+PL WWE GEILGGRDGLAGGTWLAC+R+G
Sbjct: 1   MCIAAFVWQNHPVYPFLLLLNRDEFHSRPTEPLAWWEGGEILGGRDGLAGGTWLACTRDG 60

Query: 61  RVAFITNFREVQSLPQAKSRGELPVRFLKIEDRNVWALARKILPMDFTELINMTMGIICH 120
           +VAFITN REVQ L QAKSRG+LPVRFL+           K  PM+F +           
Sbjct: 61  KVAFITNVREVQKLAQAKSRGDLPVRFLE----------SKKSPMEFAD----------- 120

Query: 121 CHRSFFSSQKSPLDFAKEVAKEAHQYNGFNLIIADISSKTMSYITNRQTNADSLVTEVSP 180
                            EV +EA QYNGFNLI+AD+ S+TM Y+TNR     + VTEVSP
Sbjct: 121 -----------------EVVEEADQYNGFNLILADLCSRTMVYVTNRPKEDRNFVTEVSP 180

Query: 181 GIHVLTNAQLDSPWPKAQRLDQSFRELINKNEDRELSAEEMVEKLMTNTVK-DDVSLLPG 240
           GIHVL+NAQLDSPWPKAQ L  SFRE++ ++   +L  + MVEKLMTNTVK +D SLLP 
Sbjct: 181 GIHVLSNAQLDSPWPKAQLLGDSFREILMESSGDDLPIKLMVEKLMTNTVKVEDESLLPH 240

Query: 241 IYSPRTEYQYSSIFVDTDTELGRFGTGSISVLSVKNSGEASFFERHLENDAWIDNHFTFQ 300
           IY P  E+  SSIFV+   +LG +GT S S +SVK +GE S++ER+LEN  W +   T+Q
Sbjct: 241 IYPPELEHHLSSIFVEKAPQLGHYGTRSTSAVSVKTNGEVSYYERYLENQVWKEGTLTYQ 263

The following BLAST results are available for this feature:

BLAST of Lsi10G008300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TNG2_HUMAN	7.1e-15	26.25	Transport and Golgi organization protein 2 homolog OS=Homo sapiens GN=TANGO2 PE=...	[more]
TNG2_BOVIN	3.5e-14	26.76	Transport and Golgi organization protein 2 homolog OS=Bos taurus GN=TANGO2 PE=2 ...	[more]
TNG2_MOUSE	1.3e-13	24.53	Transport and Golgi organization 2 homolog OS=Mus musculus GN=Tango2 PE=1 SV=1	[more]
YG37_YEAST	6.0e-06	37.00	Uncharacterized protein YGR127W OS=Saccharomyces cerevisiae (strain ATCC 204508 ...	[more]

BLAST of Lsi10G008300 vs. TrEMBL


Match Name	E-value	Identity	Description
D7U4R9_VITVI	3.2e-91	58.09	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g03840 PE=4 SV=...	[more]
A0A061E3G6_THECC	2.6e-88	54.29	Ser/Thr-rich protein T10 in DGCR region, putative isoform 1 OS=Theobroma cacao G...	[more]
V4SA16_9ROSI	1.4e-86	55.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029078mg PE=4 SV=1	[more]
A0A0B0NE22_GOSAR	1.2e-85	54.15	Ser/Thr-rich T10 in DGCR region OS=Gossypium arboreum GN=F383_14615 PE=4 SV=1	[more]
M5VKU7_PRUPE	1.3e-84	55.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009885mg PE=4 SV=1	[more]

BLAST of Lsi10G008300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38260.1	5.8e-76	47.88	Protein of unknown function (DUF833)	[more]
AT1G20730.1	7.8e-20	32.04	Protein of unknown function (DUF833)	[more]
AT1G20740.1	1.1e-13	35.33	Protein of unknown function (DUF833)	[more]

BLAST of Lsi10G008300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|359474959\|ref\|XP_003631559.1\|	4.6e-91	58.09	PREDICTED: transport and Golgi organization 2 homolog [Vitis vinifera]	[more]
gi\|1009150541\|ref\|XP_015893071.1\|	8.8e-90	57.62	PREDICTED: transport and Golgi organization protein 2 homolog isoform X1 [Ziziph...	[more]
gi\|590688843\|ref\|XP_007043060.1\|	3.7e-88	54.29	Ser/Thr-rich protein T10 in DGCR region, putative isoform 1 [Theobroma cacao]	[more]
gi\|567859542\|ref\|XP_006422425.1\|	2.0e-86	55.48	hypothetical protein CICLE_v10029078mg [Citrus clementina]	[more]
gi\|694396241\|ref\|XP_009373407.1\|	2.0e-86	56.81	PREDICTED: transport and Golgi organization protein 2 homolog [Pyrus x bretschne...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008551	TANGO2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G008300.1	Lsi10G008300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008551	Transport and Golgi organisation protein 2	PANTHER	PTHR17985	SER/THR-RICH PROTEIN T10 IN DGCR REGION	coord: 130..301 score: 1.2E-100coord: 2..94 score: 1.2E
IPR008551	Transport and Golgi organisation protein 2	PFAM	PF05742	TANGO2	coord: 1..102 score: 1.0E-33coord: 124..287 score: 1.2
None	No IPR available	PANTHER	PTHR17985:SF14	SUBFAMILY NOT NAMED	coord: 130..301 score: 1.2E-100coord: 2..94 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G008300	CmaCh02G002990	Cucurbita maxima (Rimu)	cmalsiB556
Lsi10G008300	CmoCh02G002940	Cucurbita moschata (Rifu)	cmolsiB541
Lsi10G008300	Carg19768	Silver-seed gourd	carlsiB778

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G008300	Cucumber (Chinese Long) v3	cuclsiB432
Lsi10G008300	Cucumber (Chinese Long) v3	cuclsiB450
Lsi10G008300	Watermelon (97103) v2	lsiwmbB048
Lsi10G008300	Wax gourd	lsiwgoB076
Lsi10G008300	Cucumber (Gy14) v1	cgylsiB174
Lsi10G008300	Cucumber (Gy14) v1	cgylsiB175
Lsi10G008300	Cucumber (Gy14) v1	cgylsiB177
Lsi10G008300	Wild cucumber (PI 183967)	cpilsiB411
Lsi10G008300	Wild cucumber (PI 183967)	cpilsiB425
Lsi10G008300	Wild cucumber (PI 183967)	cpilsiB426
Lsi10G008300	Cucumber (Chinese Long) v2	culsiB409
Lsi10G008300	Cucumber (Chinese Long) v2	culsiB423
Lsi10G008300	Cucumber (Chinese Long) v2	culsiB424
Lsi10G008300	Melon (DHL92) v3.5.1	lsimeB051
Lsi10G008300	Watermelon (Charleston Gray)	lsiwcgB049
Lsi10G008300	Watermelon (97103) v1	lsiwmB076
Lsi10G008300	Cucumber (Gy14) v2	cgyblsiB374
Lsi10G008300	Cucumber (Gy14) v2	cgyblsiB387