Lsi10G004670 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G004670
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNuclear pore complex protein Nup188b
Locationchr10 : 6740217 .. 6753851 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTAGATCTGTGTGGATTGTTTATGGTTGTTGTTTCACAATTTGAGATCAGGATTCTGTAAATGTCAATGAACAGATTTTCGTTTAGAAAAAACTTCACCTTGAGGTTCTTTCATGTTATGGTTGTTTATCTCGGAAATGAAAATGAAAAGGCATATGAATGCTTCAATATTTTCTTGTTAAGAATTACCTTTTTTTTTTCAATACACTTTTAAGGATTTAGGTTTGGTTACATTTTTTTTTGTTGGTTGCATTTGAAAATTTAGTCCATGTCATAAGTTTGGAAAAATATTATAATTCTCAAGTTTGGAAAAATTGGCTTTTTGGTCCATGTCATAAGTTGCCAGCTACCAGAAACTTGATGTGGATTGTTTAAAAATTTAATAAACATACTTTTAATTTTTTTAAAATACGAAATAATTTTAATATCATTTGTTTCTCTCTCTCCCATATTTCTCCCACTCCTCAAGAAATAAATTTCAAATTGCATGAACTGAAAATAAAAATATCAAACTATGCTATATTAAAAAAAGGAAAAGTTATATACTCGTATAACATAAGCGTCCCTTCAAAAACAAAATTTTTTATGTGACGTGCTTGTATTAGAGCCCTTCCCATAAGGGTAAGTCTTTCACATACAAATTTGTGATTCAGCTTATTGTCTTCTCTGCAAGAGTTATCTTGAAATGGAGCTCCATGTTAATATAGGATTGTAAATAAACGAGGAAATTTAGGGAAGTTGATTCCTTGTGCTATCCTATGTGGACACAAACTATGCTAATTTTGCTTCTCATTTTTGTAGGGTCACAAACAAGTGCTCTAAGTCGAATGGAAATGCGGATTTTCACATTGAGTGTTGTTGCCTTCTGGAATTAGCGTAACTTAATGGTGTTTGATATGACCAAGAAGATGCAGTTTGACCCTATCTTGTGGGCTTTGAAGTTTGTTAAGGGCATGAATACATATGTTGCTCAGAGAATATCGAGTTTGTCAGCCCCAAATGCCCTCTCTTTAGACTATCGATGATGTTTGCATCAGCTGCTGGAAGTCCCCATAGGGTAACTTGTACCGACTTAATTTTGATGCTTCCTTCACCATGGGAGTGGTGGGCTTTAGAGCCATTGCTCGTAATTCTAATGGTAAACCTATGATTTCGATATAAAAAGCTCTAAAGTTTATCAGTACTGTTGAGCTCGCTGAGGCTGATACTTTCATGGATGCAATTATTACGTTTGAGGAAGCAGAGATTTGTCACTTATGGGTTGAAATAGATTCGATGATTCTCTTAAACTTAATTGAAGATAGGAACTGTTTCGACAATGAATTCCAAGCCTTTGTTGATGACATTCGAGCTTTTCATGGACAATACATTGTTTTAGGCTTCTCTTTTGGTCTACAAAACTGTAATTTCATTGCTCGCATTTTGGCATGTAATGTACGGTGAACCACCGTCTTTGGTGTTTGGCTTGAAGACCACCCCCCATAGATCGATGTTGTGTATACTGATTTGATATCTCGTTAGTTATTCTTCTTCTCTGTATTACTCCAAAAAAAAAAAAAAAAACTTAGATTATATCAATTATAACTCTAACTAGACAAGTGTAGGTTAAAGGACTAACTCTAGTTTTATGTATTATGGATTTCATTTCAATTAAGTCTATATACTTTCAAATGTCCAATTTGAGTCATTAAGTTTATACACCTATGCTGACATGGGCGATATTGCACATGCCCCAAGCTGATGGCAAGCTACAGATTCTATAAATAGTCTCATTCTAAGTGTTTAACCGAACTAAACACTTTGTAAAGCTACTTGTAGTTACTCACTACACATTAAGGTTGAATGTAAACTATTATTAACTAAAAAGAATACTTGGGTTATACCCATCTTCATGTAGCACACTTAAAAACATGTCATGTGGTAAAAAAAAATTGATTTCCTAAAAAAAAAAAATCAAATTATTATTCTATTACCATGTCAATGGGCTACATGGAGACAAGTGTAACAAAGACTACACCTAATAACTACTCTATTAATTAATTCACGAACATGTTGCAGCCCTGTTGCCAAGATTATGAATTGGTAAACGTGACATCAATAATATTTGTCACAATAAAGGCTTTTTTTAAATACAACAATAGTAGAGTAAGTATCAAACCTCCAACCTCTAGGGAGAACGACCATGCCAATTATTAGTGAGCTAAGCTCACTTTGGCGGTCACAATAAAGATTAAACTGTTACAAATTGTAGAATATATAGACCAATGATTACTTATTAAAGTTTAAAAATTAAATTGCTACATTAAAAATGAGAATTTATTACAAATAAAAAAAATAACATTATTATTAATTAAAGTTCAAACATTAAATTATTATTTTCATAAAGTCGAGGAAACATACTATGAAAAGTTCACATAATATTTTGAAAATAACCTAAACATTTTGGAATTGACGCACCGCATTAGCTAGCGCGAAAGCCAAACGCATTACAAATTTCTCCGGTACTAGCAACTCACTTCCTCTTCTCCTGAGCCGCTGCGTGGCAATAGCCGAAGCCCTCTGAAACTCAGAGGCGCGAAAGAAGAGAGAATCACACAGACATTTCCCGCTTTCCTTGCTAGGGTTCAGCTCCCAAGCTCTCGCGGGGACATCTCGCATGGCTACCTCCACTTCCGTCGACTCGTCTCTCTGGTGGGATCCTTTCCGTCCACTTCTTACTGAGCTTGAAAATGTCTCCCTCTCTTCTGCAGAACTTCCTCCTAAACTGGTAAAATTCACCCCCTCCATATCTTACGCACCAGTGTTTCAGTGCACATTTAATTGTGGCAGTGTCTTTTCAGATGAAAAAGATGGACGACAACCATGCTTGGTTCGTGGACACCGTTTCACTCTTCAAGAAACCGAACGAGAAATCAAGGGTGGCTTTAGATTCTCCGGAAGTCAAAATAGGATCCCACACGCTATCTATACAATCTGAACTTAAAGCTAAAGCTCTCAAGTTGAGCTCTTATCTGGTCGGCCTGCATGCTTTGTATGCTTTAGTTGTTATATTCGAAAATTTGAATGTTTTCCATTGCATTGTTTATGTCACAATACTATATTTGTTGAGCTACTAATTCATTTTCTTTAGTTACTCCAGTTGTATGCACGACAATATGAGAATCCTCCTACTATTATTTTGACAATATACGAACTTCTCATTTGAAAATAGATGAAATTGTTCACAAAGAAATGAAATAGTTGAAAGGATACTCCTATCATTGCTTTAAAAAGCCCTCCTAGGCGCAGGTATGGGCTTCGCCTAGGTGCGCATTAGACACACACCTTTAATGAAGCCCCAAGGCCCAAGGCTTTAGGCCCCGGGGCTTTTTCATTATTTAAGAAAAACCCAGTAATAATTAGAGTTTTCCTTCTTTATTAACTAAAAAAATATTTTACTAAGTCTATATGCAAAATCCCTTGTGTTTGGGGTGGTATTCTTTTTTCTTCGTATTTTCACGTTAACTATGCTTTCTCTTTTTTATGTAGTGCTTTTATGTATAGTGTGCCTCACAAAAAAATCGACCTTTTTTTTCTTTTTTCTTTTTGTGCATTGTGCTTAAACCCCAGAAAACTATTGTGCTCCTTGAGCTTTAAAAATACCGACTCATATAGGGAGTGAGAAAGGACAAAGTAAAGGAAAAAAGGGAAAATAAGGAAAGCACAAAGGGAATATCACTCCAATTAAAACAAGAAATACAATAGACTGTTAAAAAAAATAACACGAGAATTTATAATTATTTGACAAAATTGGGTTTTCATTTACGAGGTATAATATGAACGAAAAGGGTGAGCTTCCAAAATATTTATTGGACATGTTACTTTCTTTTCTCCTTGTTAAAAATATAATATTATCATTTTATTTATTGATGATTTACGTTTATATGTCCGTTTCAGTGTTTGGATGAGGTCCAATCGTACATTCTCGCTGCAAGAACCATTGAACATGAGAATGTAGTTGAAAACTCCCCATTTCAGGAACTTCTTCACATGGTTAGTAGCTTTGTCCAATGATTCTTATATGTATCTTTAATGGACACCTTTCAAGAGAGGTATTACATTTTGTTCTGTGGTGAAGATTTAATTTTTGATCATATGTTAAGTCTACGATGATAGTAAGTAGCAGGATGAACGATTAAGTCTGGTGGTGAAGATATATTCTTGAAGTTCTATGCTTAAGTACTTTTTGATTAATGTTTTATGAGGTCAAGTCACTAGAGCTCATATAGTTTTTTATACAATGGAGGTAATGAACCACCATAGGTTTACCCAATGGTGATTGTGACAGGCAACAAAATAGGGTTTAGAGGAAACGAGTTCGAACAATGGCATCTAGCTACCTAAGATTTAAAATTTTTCAATTTTTCTTGGCAACCAAATGTAGTAGGGACAACAGTTTTTCTTTGAGATCAGTTGAGGTGTCAAGTGTGTGCAAGTTAGCTTAGACACTCACCAATATTAAAAAAAGCAATTCGTCAAAATGTCTTATTAACCGAAAAAAAGCGAGTTAGCTTTGACACTCATCAATGTCTTAATACTTTTTTGATATTTAGTTTCATTGTAATCGAGTTTTTGCTCTTTTCATTATATCAATGAAAAATTTTCGTTTCCGTTTAAAAAAAAACCGAAGAAGAAATTCGATTAGCAGCTACTGAATTTCAAGAAGTTGGTTGTTGGAGGCCTTAGAATTTAGGGTGGCTTTGTTCCCAAGTTTTCATAGGTGGAGGTTGGATTTTTCTAATTTGTTTGCTCCTTTCCATGCTCTTGGTGCCCTCTTTCTATTTGGAGTTGTCTGGTTCTAAAGCATTATGGTTCTCCAAATATTCTAGTCGGATTGTTCCTCTATTGTGGCTCTGGTTTTGTGGATTGTTGGTTATTAACTGTTTAGTAGAAGTTGAAGCTGACTTTCTCTCCGAAGTGTTGTCCTTGTCACATGGTTACTTGTTCACAGAGTTTCAATTTTAGTGGTGTTTGGAATTTTCGTTTAAAGAACCATTTTGTTCCATCTTAGGATGCATTTGTTTGTATTTGCTTTAATTTTCTGGATAAATCCAGCTTTGGGCCATTTTTTGTTGTATTATCTTTCTTATTTTGTCTCATTGTACTCGAGGGTTAGTCTCTTTTCATTTCATTAATGAAAAGCTTTGTTTCCATTTCAAAAAAAAAAAAAAACTTGGGAGAAATAAACCTTCACGGCTTGATGGAGTTCTTACAAGAGGGCTTGGAACATTTTTTTAAAAAGGAAACAACTTTTCATTGATGGAATGAACAGAGACTAACGCTCAAAATATAATGGAACAAAATAAAACAAAAATATAGTGAGTACAAACAAAACGGCCAAATACACCCAATAAGAGAAGACAATAACTCTAATCGATCTCAAACTAAAATAAAAAATCAACTAAACTTGATATGCTCAAAGAATTCTTCAAAAAAGAACACCTCAAATAAAAAAAAACTCTGAACAACTGAGGAAAAACTTCTAAAGAGCCCAAACAAACTGGAAACTATTGGCCCAAAATGAGCTTCTGAAACCCATTGAAAGTGAAGAATGGTGAAACAACGCACAAAAATGCAGCACGCACTGAAAGACTTCTCTGAAAGGCTTCAAAGTAAACTTCAACCTAGGAGCTTCTGATGACAAAAAGTTGAAGGAAAAAAAGTCAACTTAAATTTATATCCCTAATCCTTAGTCAAACCTTAATTTGAGGTGACTTAGGTCTGATTTCTATCATCTGTAAACCACACGCCTCAATTAAGGAATGAAATTTGGAAGGAACTGAGGAAGGAATTAAGGGATACTTTGCCGCCCATGCTACTGAAAGTAAAACTTCATCTGTAACCTTATCATCATCAATTAAAAAGAGATTATCAAAAGCTCTTGTAAGAGAGTCTTCAATAGGAAGGTCATCTTACTGAGTATTTGCAATTTGCTCTTCAACCTCCTCACTACTCATACTAACATTAGATGCAAGATCAAAAACCCCATCATGAATAGAATGAGTGGAGGTTGATGCCTTGGTAGTGGAAGAGGACAAAACACCTTTGGTAAACATAACATTTGATCCTGGAATGAACTTTGTATATGTGTACGGATCTGAAGGAAGTGAAGGAGGCTGGGATAGCTTTGGTGATGAAGTAATGAGTCGAGTACAAGCTTCCTCCAAAATATCTGCGCTAATTTATGATTTTCCAAGGAAACTAAAGCGAGTAATCTTTCTAGTATAAAAGAAAGGGTGGCGTTCAATAAGCCGAGAATTCAAAATAGGGCCTTGAATTGTAGAGTAGAAACATGGTTGTGAAGATTGACCACAATCTGAAGAAGAGCGAATAGCTTGAAGGTCATCATGTAAATAGGATAGGAGCCAACTGAATTCTGCAAAAGAACATTCTCATAAGAAGGGTTTGGAACAACCATGTTTCCCTTGTCGGACACAACAAGCACGCTAAAGCCTTCATCAATCATTACTTGAGCTATTCTCTTAAGATCCACTGCATTTGAGAAACTGAAGAATGATAAATCTCCATGACCAGTGCGAGGTGGATTCAAAGGGCAAATATCCCAAAATGAAGCGAAAAACTGCCATACTTATATGTTATCTCAATCTCAGCAGGTATAAATCCACATAAAATTTTCTCCACTTCAATTATAGTAGTTGTACAATCAATTAGATTAAGTGTCTGAGAGGAGATATTAACCAAGCCTCCAAAATGCTGACCAATTGCTTCAAAGCAAGAACGTTTCCAGTAAGGCAATGGTAAATTCTTCATTGAAATCGAACCATCATAACCTTCAATAAATTTTGGATGGGAATGTTCTTCATGAGACCATTTTTCAGTTTTTAGGTGATAGTCACCAATTAGTTTCCATTTCCCATCAAAATCCAAATCAGGAAAATCATCCCTTAGATGTAATAATGCTTTATCGGCCATAAATGTGTTAATAGATACCTTGGATTGAAAATAAACTTCTAAAGCGTCATGAATGTCCAACCAAGAATTATGAGCTAACAATCTTGAAATCACTAAAAGAGAACTGAAACTCATATCCACTACCTCTTTTTCTTTCCTCACCCAATAGGTGGAAGCATCTGAATTTTGCTTAAGCAACCCATTTGCAAAAATGGCATTGAGATGATTATTTTTACCCTTCTTTGGGGACAATGCTTCTTCTTCCTCATCAAGCTTTGAAGGAGTGACGAGAGAGTGTTGCAAATTCTCTACTTTTGGAAGAAATTCTTGAATCATATCCCAAAAAACAAACCAACCTTTTTTTTTTCCAACCCCAACTGCAACAAGTAATCGCTTTCTACCACCAGTAGGTGGCCATACAACACACTCAAGTTTCCAACCGATGACGGATTTAAATTTAACCAAAAGGATAGTGCCGGAATCATCCCTAAATTTTCTCCCAAAAAAGTATGGACTAGAATTTGCAATATTTCAGCCAAAGAGTCTTCAATCCAACTCAAATGAGAGAAAGTGAGAGGAATTGACATTTTATTTTCTAAGTCTTCAACAAAACCTAAATCATCTTCAAACCAAGCCTTGAAGTAAATATTGCTTATACAACAACTCAAAGAATCCACGAGACTCAAAATCGAGTTAACTGTGGGAGAGTCTGGCCAACAAAGAGGAGGGAGGACAGAAGCAAGCAGGAACCAAAGAAAAGTAAGGAAAAATGAGGAGAATAGGGCGAAGGCGACATAGGGGAAAGATGGAGAAGGAAAGGTTAGAGCGAAGGAAGAAGAAAGAAGAGAAAAAAGAAGAAGAAAGAAAAAAGGGGGACCTGAACGAAGAAGACAGGCGGAAACGGAGAAGAGTTAACCCGCCTACGTTGATTGGAAGATTGGACGGTCAGAAATTGACAACGGAGGACGAAGGATGGATGGAAAGAGGGAGACATAGAAGCTACGGGTTTATGGCAGCTGGGTTAAAAATGCAGATAAAAACGACTATGGTTTGGAGAGAGGTCGAGGCGAACGTCGTCGGGGGGATGACCGGAAAGAAACGGAGAGGTCTGAGATAGACGACAGCCGGAGAAAGAACAGTAGGACGACGAAAGTGGGACGACTAGGTCAGTTTCAAGGAGGCTTGGAGCATTCTAAATGATGATATTCTAGGAGCATTCCTATAAGCTTGATCTCATGTACGTAATAGATTATTTATTTACTTTTTGAACAAGGAATGACATTTTTTTTAATTGAGAAATGAAAAAGACTAATACTTAAAAGATACAAGCTCCCCAAAGAAGAATAATTAAACAAAAAGAACAATACAAGAAAAGTAAATTATGAGGAAACAAAGTCAGCCCCATTCAAATTATATCTCGAAGAGAAAACCACTAACGAAGCCTGGAATGAAAACACCAACGAGAGGCCTTCAAATGAATGGCTTCACAACGATCTAACCATTGAAATGCTTGCTTTAAAAAACTCTTTTCATTAGATCAATGAAGAGACTTGTTTCCTTTTTTTTTTTTTTAAAAAAAACTCTTGATTTCTTTCTCACCATCGTTTCACGATAATTGCTTTTACAACGTTGACCCATAATGGATGAGGCCGAGAAGGAAAGCAAGGACCCATTAACAACGGTAGCGAGTTGCATTTTGAGTCATTAGAGAAAACCCAACGAGTGTTGAAACAAGCAAAAAGCTGTTGCCACTTTCTAGCAAGATAGAGCATATAAACGATAAAAGAGTAGGTGGTTTAAACTCTTTGAATCTGATTCACCTAATAAACAATTAGAGGGCATGAGGAACATCGAAGGCAACTTACTTTGCAGCACGTCCATATACTGTAGTATTGAACTACTGTTTAACACAAAATTCACATTAGAATGTTGATCTTTTTTAGACATTTCGATGTTGATAATGCTGAAAATAAAGCTTTAGGTAATGGATAATCAATTGATAATTGTCTGGCAAGGGATTTAACTGAAAATTTTCTCGAGGCATTAATACTCCAACCCTTAGAATCCTCACTGCAGACACTGTAATGACGTTGCAATACTCACGATTGAAGTTTTTTTTTTTTTGTCCGTTGAACATTAATGTCTTTTAATTTATTCAATGACAAGTTTGGTCTCTTGTTAAAAAAAATCAATTTTGTAACAAAATTTTTCAATTTCGATTTGGAGGTTCCATAACAATGCTCGGTAAGCCAAATGGCTTTGGCGATTCACCCTCGAGTCTAGCTCCCTAGTCCCTATCGCATAATATTATTGTAGCAAGTTTGGTCCCCATCCTTAGGCTTACCAAAAAGAGGGAGCCCCAAGTATTCTACAGGCCAAGATCTCTTCTTACAGTCAAATCTCTTAGCAATGCTATCAACCCATAAACTATCACAATCTATGCCCAAAAATTCTGATTTATGTCGGTTGATATTCAAACTAGATGCCTCTTGAAGGAAATTGACCAAACTAAAGAGATTTTCTATGTCCTCCTCTTTGCTCGATGAGAAAAGAATGTTGTTGTCTGCGGATGATGATTAGTGTGAATAGAATCATTGTTTAAGGAATATCCTTTGATGAAATCAATGTCAGCTGTCATTGATAAAATTCTACTAAGAGAATCCATCACAATGATAAAGAGAAAAGGGGACAACGTATCACCTTGCGTAAGACCTCTCGATGCTTTAATTTTACCCCTCGGTTTACCATTGATAATTATAGAGAAGCTGGTAGAAGAGATGCAACCTCAAATCCATTGCCTTCATTTTGTGCCTAATTGGTACAAGTTTACCTTGCTTTTTGGTAAGTTTTATTGTGTTTAATTAAGGTTTTGTGATTCAAGTCCGTAACGATGGTGAGATTTTGGAATGGATTTAGGTTCGTCAGGTTTGTTTTTATTTCTCTTTGACTTTCCCCCACTACTATCCGTATTCTAGAATCTGATTTAGATTTCAATAGTTACGTTCTAAACTGCTGGAGAATCCTAAATGTAGAAACTTAAAATTAATCATGTTTCTTCCACTCTAAGAAGTAGAGACACTTTAGTTTGGCTAGCGTGCTCGTGTTAGACACTTGGACACTTCGACACTTATTGGAAATGGACACGTATTAGACACTTGTTAGACATTAGTTTTACAAAGTGATGTAAGTAGAATGAGGTTAAATTGGGTAATTAGGCAATAAGTCCAGGTTAATTCCCTTTTTACCCGTAGTTATATTAAAACTCTATAAATAGGAGTCTTCCCCCATGTATGGACAATTAATGAATAAGTTAAGGCGAGGGACTGCACATCCCTTTTTCCCAGTTCAAATTCGGGTGTCGCCTCATCAACAATTTTCCTTCAAGAATTCTCCAAGATTAGTCTACATCAAATTGGTATTAGAGTGCCTTCGTGAAAGGACCTGATGGTGATCAAGAACACCAACAAGCTTCCCAACCTTCAAACTCGTGATGCGGAAGCATCCTTCTCCACATCTCCTCAAACTGTGAATTGAAGACTTGCAATTTGGAAACTTTAGTGGATGGTTTATGGGACAATATGATTTTGATGCAAACCTCAAAGGCCCGGTTGCAACAAGCTATTGAGAAGTTATCGTCGGAAGTGGGAAAGATGACCAACAATCAATCAAGAACCAACCAAGAAAATCCAAGGATGTAAAAAGTTGCAAGAAATCCACCCAGAAGACAAATTTCAGAATTTCAACCAACAATCAATTATCAAAATCATCCTGTAGGTATTTTTCCTCAACAACAAAGACCGATTCCACACAATATGATGAGATATGATTCAGACTCTTCAAGCGATGAAGGTTGTCCACAATTTCACCAAAATTATTTTCGAAGGTACCCTCCTAATCATTTGTATCAAGAAAACCATCTTCGAGCCCAAGAACCATACCAAGAACACAAAAATTATGGTTATAATGGCCTTGTTTTCTATCAAGAGGAGTTTTTTTTTAAAAGGAAACAAGTCTCTTTCATTGATAAAATGAATTGAGACAAAAGCTCAGAGTACATAATTGGGAAACATCATCAAAATAGCCTAAGGATCAGGGAATGCACCCGGACATCTCAACTAGGTTGACACCTCCGTAGCACTCTCATCATATCCAAGATAATTGTAAACGAAATAAGAAACCAATAATTACTACTAGCTCAATCCAATGTAAGGGAAAACCCCGAATACATGGGTCAAAGACAAAAGAACTAAAAGACATGAATCTGAAAGGAAATACATTATACAAAATCCCTTTAAGAACAATCTAAACTCTAAGGTGCTGGAAACAATCGCCACTTTCAAAATTACCAAGATCTAACCACTGATACATCAAATACCTTCCCAAGACCTCAAGATCAAGCAGGTAATAATTCCCATGTCCAAGAAACTTATCCAACTTATCATAATGGTCAACAACATCACCCACTGTTTAGACATTATGACCAAGAAGCTGTCCAAGAATATCAAGATTGGCAACATCAGAACTAGAAACATCAATATTGGCACCAAGATTCAAATTATAGAATGAAAATTGACTTGCCTTGCTATAATGGCCGAATGAATGTGAAATTTTTTTTGAACTGGGCTTGTGTCGTTGACTGTATATTCAAGGAACATTTGGATCAAGAGCAGCCTAGTGGAGATGGAATATTTGGAATTTTGGATGGAGTTTTTGACATTGCAGCAGCTGCAACAGAGGTATTAGATGACCTTGATGATAAAAGATTTGATGAACTCGATGGACTTAATGGAAATTTTATGTCTTGGACTTTTTTACATAATAATTTTGTTTAAGATGTAGGAGGTTGGTTTGACCATACTCCGTTGTACAAGTTTATTTTATTTCTTAATTGTTTCATTTTTTTCTTCTTGTTAAAACTCAAGAACGAGTTTCCTTTTTGGAGGGGTAGAATGATATAAGTAGAATGAGGTTAAATTGGGTAATTAGGCAATAGGTTTAGGTTAATTCCCTTTTTACCCCCACTTGTATTAAAACTCTATAAATAGGAGTCTTCCCCCCATGTATGGACAATTAATGAATAAGATTTTCCTTCAAGAATTCTCCAAGATTCGTAGTCTACATCACAAAGTCAAAATAGGACTGACATTTGTTAGACATGCATCAAATACTTGTTACATATACTAAAATAGACACAAATATGACAAAAATATCTAAATATAAGAGCGAAATGCATCAAACTAATTTTTTAAGCATATAAATATATAAACTCATTGACTTTGAATTTTCTTCTTGTTTGAAAATGATATATATTTTAAAAAATGTATTTTTAATGAACGTGTCCTTGTTGTGTCCATGACCTAGATTTTTTTAAAAATTAGCGTGTCATTGTGTTTGTGTCGTGTCATATCTATGTTTCGTATCCGTATCCGTGCTTCTTTAGCTTGCATTTTTCTTCATCACTTAGCCCCCAAATTTATTTTTTTTCAGAAGTAGACAATAAGACTTCTCCTCCTATTCCATCCTCCATTCTGACGAAGTTTGCTTCTTGAGTTTCGTGAAATTTCTCCATTGGTTTATGGAAGAAGTCGTTTCAGTTTAAGTTTGGCAAGTTTTGTTTTGTTGTACCTGAGATTTCGATGTTTTGGTTCTTCTCTCAAGCTTTTAAACCGGCAGTTTGGTTGCCCTTTTGGTTACTTGAAGTCTTTAGCCTTGATAGATGACTTTGGTCTTGAGTTTTTGTGAATTTCCTCCTTTGGCTGCAACATTTTGTTTTGACTTCTCCGAGATATTTGGTTTGACTTCCGTAAGGAGATTTTTGTTTCTTTACTGGTGTTGGTTTTGGTTCTTCCAAAGCTGTTTTCAATGAATTATTTTTTCTTTCTAAGTTGCTTGAAGTTTGGGAGTTTGTAGCACCATTCTTTTTGCTATTAAGTAGTTTTTTGTGTGTGTTGCATCAGATTGCTTTTTGTTGTGTTTTAAATGGTTTTTATGATTGGTTGGTGGTCAATTCTTGGTTTTGTCGGGGTTTTTTTGAAGCAGCTATTGGTTTTCCGTGTTTGAAGGAGGTCTCATTCATAGTTACTTCATTCTTTTGCAAGCGCTCTAAGTATTTCAGTTGATTTCGGAAATGCTCTTGGCTCTTTATTTGTTTATTTTTCTTGGATAATCTTTTTATGGTTGTGTTTGTTATTTGTACTTTTTCTTTCTTTTTCACTCCCTTTGGGAGTTTGTATTCCTTGAACATTTATTCCTTTTCATTATATAATGAGAAGTTGTTTCTTGTTCATAAAAAACTGAGACCTGAAGTTAATATCAGGTACGTGTTTGATCATATTTTTTAAGTTATTGTCCTTGTCTTATTTAGTTTTCTTATTTTAATGAAGGTTCTACTTGAATATTACATTGAACGGCAGTGCTTGCTGAAATGTACAAGGCGCATACTCTTGCATGCTTGTAAGTTCATTTTGATGAATGATTACCGTCTCTGATTTTGAGTTGTTTGCTCATTTCTCCTCTCTAACTGGTTTTTGCATACATGAGTTTTCTCATTTAGGGCTATCTTTTTCCTAGATGTTAATTTTTACTTAATTCCTAATTTATTTTATTGATGCTCTCATTGTAGTATTTGTTGGAAATGGTTCCAAAAAAGATGATATTTGTGACAAGGCACAAAGACTGA

mRNA sequence

ATGAACTCCCAAGCTCTCGCGGGGACATCTCGCATGGCTACCTCCACTTCCGTCGACTCGTCTCTCTGGTGGGATCCTTTCCGTCCACTTCTTACTGAGCTTGAAAATGTCTCCCTCTCTTCTGCAGAACTTCCTCCTAAACTGATGAAAAAGATGGACGACAACCATGCTTGGTTCGTGGACACCGTTTCACTCTTCAAGAAACCGAACGAGAAATCAAGGGTGGCTTTAGATTCTCCGGAATATTTGTTGGAAATGGTTCCAAAAAAGATGATATTTGTGACAAGGCACAAAGACTGA

Coding sequence (CDS)

ATGAACTCCCAAGCTCTCGCGGGGACATCTCGCATGGCTACCTCCACTTCCGTCGACTCGTCTCTCTGGTGGGATCCTTTCCGTCCACTTCTTACTGAGCTTGAAAATGTCTCCCTCTCTTCTGCAGAACTTCCTCCTAAACTGATGAAAAAGATGGACGACAACCATGCTTGGTTCGTGGACACCGTTTCACTCTTCAAGAAACCGAACGAGAAATCAAGGGTGGCTTTAGATTCTCCGGAATATTTGTTGGAAATGGTTCCAAAAAAGATGATATTTGTGACAAGGCACAAAGACTGA

Protein sequence

MNSQALAGTSRMATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNEKSRVALDSPEYLLEMVPKKMIFVTRHKD
Homology
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BLAST of Lsi10G004670 vs. TrEMBL
Match: E5GC19_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.3e-28
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          MA+STSVDSSLWWDPF P LTELENVSLSS ELPP LMKKMDDNHAWFV TVSLFKKPNE
Sbjct: 1  MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 72 KSRVALDSPE 82
          KSRVALDS E
Sbjct: 61 KSRVALDSQE 70

[Close]
BLAST of Lsi10G004670 vs. TrEMBL
Match: A0A0A0LPK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263960 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.5e-25
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          M +STSVDS LWWDPF P LTELENVSLSS ELPP LMKK+D NHAWFV TVSLFKKPNE
Sbjct: 1  MTSSTSVDSFLWWDPFHPFLTELENVSLSSTELPPTLMKKVDANHAWFVGTVSLFKKPNE 60

Query: 72 KSRVALDSPE 82
          KSRVAL+S E
Sbjct: 61 KSRVALNSQE 70

[Close]
BLAST of Lsi10G004670 vs. TrEMBL
Match: W9R6T0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024956 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17
Identity = 48/70 (68.57%), Postives = 53/70 (75.71%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          MA   SVD SLWWDPF  LLTELEN SLSS +LPP L KK+ DNH W VDTVS FK PNE
Sbjct: 1  MANLKSVDPSLWWDPFSLLLTELENASLSS-DLPPNLTKKLKDNHDWLVDTVSRFKPPNE 60

Query: 72 KSRVALDSPE 82
          KS+ AL+S +
Sbjct: 61 KSKEALNSQQ 69

[Close]
BLAST of Lsi10G004670 vs. TrEMBL
Match: W6JJ93_NICBE (Nuclear pore complex protein Nup188b OS=Nicotiana benthamiana GN=NbNup188b PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.5e-17
Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 6  LAGTSRMATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSL 65
          +A  +++    +VD+SLWW+PF  LLTELE+VSLSS +LPP L KK+ DNHAWF+ T+SL
Sbjct: 1  MATLAKVNDEVTVDASLWWEPFTELLTELESVSLSS-DLPPLLEKKIKDNHAWFLHTISL 60

Query: 66 FKKPNEKSRVALDS 80
          FK PN+KSR ALD+
Sbjct: 61 FKSPNQKSRDALDA 73

[Close]
BLAST of Lsi10G004670 vs. TrEMBL
Match: A0A087GKR9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G265400 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-16
Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          MA S SVDSSLWWDPF  LLTELEN SL   +LP +++KK+++NHAWFV+T+S+FK P+ 
Sbjct: 1  MANSKSVDSSLWWDPFDSLLTELENASLYD-DLPDRIVKKLEENHAWFVNTLSMFKSPSV 60

Query: 72 KSRVALDS 80
          KS+ AL+S
Sbjct: 61 KSKEALNS 67

[Close]
BLAST of Lsi10G004670 vs. TAIR10
Match: AT4G38760.1 (AT4G38760.1 Protein of unknown function (DUF3414))

HSP 1 Score: 91.3 bits (225), Expect = 3.7e-19
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 1 

Query: 12  MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
           MA   SVDSSLWWDPF  LLT+LEN SLS  +LP  + KK+++NHAWFV T+S+FK P+E
Sbjct: 1   MANPNSVDSSLWWDPFDSLLTDLENASLSD-DLPQPIAKKLEENHAWFVGTLSMFKPPSE 60

Query: 72  KSRVALDSPEYLLEMVPKKMIFVTRHKD 100
           KS+ AL+S   L+++   +++   + KD
Sbjct: 61  KSKEALNSD--LVKIKEHQLVIKPQLKD 85

[Close]
BLAST of Lsi10G004670 vs. NCBI nr
Match: gi|659116180|ref|XP_008457947.1| (PREDICTED: uncharacterized protein LOC103497512 [Cucumis melo])

HSP 1 Score: 131.3 bits (329), Expect = 9.1e-28
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          MA+STSVDSSLWWDPF P LTELENVSLSS ELPP LMKKMDDNHAWFV TVSLFKKPNE
Sbjct: 1  MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 72 KSRVALDSPE 82
          KSRVALDS E
Sbjct: 61 KSRVALDSQE 70

[Close]
BLAST of Lsi10G004670 vs. NCBI nr
Match: gi|307136176|gb|ADN34017.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 131.3 bits (329), Expect = 9.1e-28
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          MA+STSVDSSLWWDPF P LTELENVSLSS ELPP LMKKMDDNHAWFV TVSLFKKPNE
Sbjct: 1  MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 72 KSRVALDSPE 82
          KSRVALDS E
Sbjct: 61 KSRVALDSQE 70

[Close]
BLAST of Lsi10G004670 vs. NCBI nr
Match: gi|778669647|ref|XP_011649284.1| (PREDICTED: uncharacterized protein LOC101204633 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          M +STSVDS LWWDPF P LTELENVSLSS ELPP LMKK+D NHAWFV TVSLFKKPNE
Sbjct: 1  MTSSTSVDSFLWWDPFHPFLTELENVSLSSTELPPTLMKKVDANHAWFVGTVSLFKKPNE 60

Query: 72 KSRVALDSPE 82
          KSRVAL+S E
Sbjct: 61 KSRVALNSQE 70

[Close]
BLAST of Lsi10G004670 vs. NCBI nr
Match: gi|700206782|gb|KGN61901.1| (hypothetical protein Csa_2G263960 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          M +STSVDS LWWDPF P LTELENVSLSS ELPP LMKK+D NHAWFV TVSLFKKPNE
Sbjct: 1  MTSSTSVDSFLWWDPFHPFLTELENVSLSSTELPPTLMKKVDANHAWFVGTVSLFKKPNE 60

Query: 72 KSRVALDSPE 82
          KSRVAL+S E
Sbjct: 61 KSRVALNSQE 70

[Close]
BLAST of Lsi10G004670 vs. NCBI nr
Match: gi|645261245|ref|XP_008236201.1| (PREDICTED: uncharacterized protein LOC103334994 [Prunus mume])

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 1 

Query: 12 MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 71
          MA+  SVD+SLWWDPF  LLTELEN SLSS +LPP L+KK+ DNHAWFVDT+S FK PNE
Sbjct: 1  MASPKSVDASLWWDPFSVLLTELENASLSS-DLPPNLVKKLKDNHAWFVDTLSHFKPPNE 60

Query: 72 KSRVALDSPE 82
           SR AL+S +
Sbjct: 61 NSREALNSQQ 69

The following BLAST results are available for this feature:
BLAST of Lsi10G004670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi10G004670 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GC19_CUCME6.3e-2890.00Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LPK9_CUCSA8.5e-2582.86Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263960 PE=4 SV=1[more]
W9R6T0_9ROSA5.0e-1768.57Uncharacterized protein OS=Morus notabilis GN=L484_024956 PE=4 SV=1[more]
W6JJ93_NICBE8.5e-1760.81Nuclear pore complex protein Nup188b OS=Nicotiana benthamiana GN=NbNup188b PE=2 ... [more]
A0A087GKR9_ARAAL4.2e-1663.24Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G265400 PE=4 SV=1[more]
BLAST of Lsi10G004670 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38760.13.7e-1952.27 Protein of unknown function (DUF3414)[more]
BLAST of Lsi10G004670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116180|ref|XP_008457947.1|9.1e-2890.00PREDICTED: uncharacterized protein LOC103497512 [Cucumis melo][more]
gi|307136176|gb|ADN34017.1|9.1e-2890.00hypothetical protein [Cucumis melo subsp. melo][more]
gi|778669647|ref|XP_011649284.1|1.2e-2482.86PREDICTED: uncharacterized protein LOC101204633 [Cucumis sativus][more]
gi|700206782|gb|KGN61901.1|1.2e-2482.86hypothetical protein Csa_2G263960 [Cucumis sativus][more]
gi|645261245|ref|XP_008236201.1|2.2e-1870.00PREDICTED: uncharacterized protein LOC103334994 [Prunus mume][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function
molecular_function GO:0017056 structural constituent of nuclear pore
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G004670.1Lsi10G004670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi10G004670Csa2G263960Cucumber (Chinese Long) v2culsiB093
Lsi10G004670CSPI02G13190Wild cucumber (PI 183967)cpilsiB091
Lsi10G004670Cucsa.169190Cucumber (Gy14) v1cgylsiB281
Lsi10G004670CmoCh02G003200Cucurbita moschata (Rifu)cmolsiB533
Lsi10G004670MELO3C020787Melon (DHL92) v3.5.1lsimeB054
Lsi10G004670ClCG02G011550Watermelon (Charleston Gray)lsiwcgB045
Lsi10G004670Bhi10G001501Wax gourdlsiwgoB080
Lsi10G004670Cp4.1LG05g13100Cucurbita pepo (Zucchini)cpelsiB589
Lsi10G004670CsGy2G013150Cucumber (Gy14) v2cgyblsiB086
Lsi10G004670Carg19796Silver-seed gourdcarlsiB777
Lsi10G004670CsaV3_2G015750Cucumber (Chinese Long) v3cuclsiB104
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G004670Wax gourdlsiwgoB065
Lsi10G004670Wax gourdlsiwgoB089
Lsi10G004670Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi10G004670Bottle gourd (USVL1VR-Ls)lsilsiB031
Lsi10G004670Cucumber (Gy14) v1cgylsiB019
Lsi10G004670Cucumber (Gy14) v1cgylsiB617
Lsi10G004670Cucurbita maxima (Rimu)cmalsiB089
Lsi10G004670Cucurbita maxima (Rimu)cmalsiB466
Lsi10G004670Cucurbita maxima (Rimu)cmalsiB507
Lsi10G004670Cucurbita maxima (Rimu)cmalsiB548
Lsi10G004670Cucurbita maxima (Rimu)cmalsiB596
Lsi10G004670Cucurbita moschata (Rifu)cmolsiB073
Lsi10G004670Cucurbita moschata (Rifu)cmolsiB451
Lsi10G004670Cucurbita moschata (Rifu)cmolsiB491
Lsi10G004670Cucurbita moschata (Rifu)cmolsiB580
Lsi10G004670Cucurbita pepo (Zucchini)cpelsiB046
Lsi10G004670Cucurbita pepo (Zucchini)cpelsiB197
Lsi10G004670Cucurbita pepo (Zucchini)cpelsiB220
Lsi10G004670Cucurbita pepo (Zucchini)cpelsiB388
Lsi10G004670Cucurbita pepo (Zucchini)cpelsiB436
Lsi10G004670Cucurbita pepo (Zucchini)cpelsiB522
Lsi10G004670Wild cucumber (PI 183967)cpilsiB414
Lsi10G004670Wild cucumber (PI 183967)cpilsiB497
Lsi10G004670Cucumber (Chinese Long) v2culsiB411
Lsi10G004670Cucumber (Chinese Long) v2culsiB489
Lsi10G004670Melon (DHL92) v3.5.1lsimeB064
Lsi10G004670Melon (DHL92) v3.5.1lsimeB077
Lsi10G004670Watermelon (Charleston Gray)lsiwcgB041
Lsi10G004670Watermelon (Charleston Gray)lsiwcgB057
Lsi10G004670Watermelon (97103) v1lsiwmB065
Lsi10G004670Watermelon (97103) v1lsiwmB079
Lsi10G004670Cucumber (Gy14) v2cgyblsiB456
Lsi10G004670Melon (DHL92) v3.6.1lsimedB056
Lsi10G004670Melon (DHL92) v3.6.1lsimedB069
Lsi10G004670Melon (DHL92) v3.6.1lsimedB080
Lsi10G004670Silver-seed gourdcarlsiB289
Lsi10G004670Silver-seed gourdcarlsiB314
Lsi10G004670Silver-seed gourdcarlsiB363
Lsi10G004670Silver-seed gourdcarlsiB927
Lsi10G004670Cucumber (Chinese Long) v3cuclsiB437
Lsi10G004670Cucumber (Chinese Long) v3cuclsiB523
Lsi10G004670Watermelon (97103) v2lsiwmbB034
Lsi10G004670Watermelon (97103) v2lsiwmbB044
Lsi10G004670Watermelon (97103) v2lsiwmbB058