Lsi10G004420 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi10G004420
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSAUR-like auxin-responsive protein family
Locationchr10 : 6587354 .. 6587647 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTCGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGTTTTACCAAAAACCAACTGGATGTTCCAAAAGGCCATGTGGCAGTTTACGTGGGAGAGATTCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACTTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAGGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTGTAGATCTCACTTCTAGATTGCAAGTAGCTTGA

mRNA sequence

ATGGGGATTCGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGTTTTACCAAAAACCAACTGGATGTTCCAAAAGGCCATGTGGCAGTTTACGTGGGAGAGATTCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACTTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAGGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTGTAGATCTCACTTCTAGATTGCAAGTAGCTTGA

Coding sequence (CDS)

ATGGGGATTCGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGTCAGGTTTTACCAAAAACCAACTGGATGTTCCAAAAGGCCATGTGGCAGTTTACGTGGGAGAGATTCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACTTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAGGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTGTAGATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA
Homology
[Close]
BLAST of Lsi10G004420 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-24
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 1 

Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]
BLAST of Lsi10G004420 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 1 

Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]
BLAST of Lsi10G004420 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.6e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]
BLAST of Lsi10G004420 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]
BLAST of Lsi10G004420 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1 

Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]
BLAST of Lsi10G004420 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.0e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG RLLSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LLSHAEEEFGFHHP GGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of Lsi10G004420 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-44
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]
BLAST of Lsi10G004420 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.0e-44
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LL+H+EEEFGFHHPQG LTIPCKEDAF+DLTSRLQ++
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]
BLAST of Lsi10G004420 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-43
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG+ LL LVPHAK+ILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LLS AEEEFGFHHP GGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]
BLAST of Lsi10G004420 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-41
Identity = 86/97 (88.66%), Postives = 89/97 (91.75%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LLS+AEEEFGFHHPQGGLTIPCKEDAFVDLTS+LQV+
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]
BLAST of Lsi10G004420 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 1   MGIRLLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]
BLAST of Lsi10G004420 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          +LL  AEEEFGF HP GGLTIPC E  F+DL SRL  +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]
BLAST of Lsi10G004420 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]
BLAST of Lsi10G004420 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 1 

Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]
BLAST of Lsi10G004420 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 1 

Query: 1   MGIRLLSLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQV 97
           PISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]
BLAST of Lsi10G004420 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG RLLSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LLSHAEEEFGFHHP GGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of Lsi10G004420 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 5.5e-46
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LLS+AEEEFGFHHPQGGLTIPCKED F+DLTSRLQV+
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]
BLAST of Lsi10G004420 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 8.0e-45
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LL+ AEEEFGFHHP GGLTIPCKEDAFVDLTSRLQVA
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of Lsi10G004420 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-44
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]
BLAST of Lsi10G004420 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVA 98
          LL+H+EEEFGFHHPQG LTIPCKEDAF+DLTSRLQ++
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:
BLAST of Lsi10G004420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAU24_ARATH5.9e-2463.10Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1[more]
SAU20_ARATH3.0e-2364.56Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1[more]
SAU22_ARATH6.6e-2371.21Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1[more]
SAU21_ARATH1.1e-2271.21Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1[more]
SAU23_ARATH1.1e-2272.31Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1[more]
BLAST of Lsi10G004420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPI0_CUCSA3.0e-4695.88Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1[more]
A0A0A0LLF1_CUCSA2.1e-4489.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1[more]
A0A0A0LIZ9_CUCSA8.0e-4487.63Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1[more]
A0A0A0LJ99_CUCSA4.0e-4389.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1[more]
A0A0A0LJA3_CUCSA1.7e-4188.66Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1[more]
BLAST of Lsi10G004420 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34810.12.7e-2758.10 SAUR-like auxin-responsive protein family [more]
AT2G21210.13.6e-2757.14 SAUR-like auxin-responsive protein family [more]
AT4G38840.13.6e-2758.76 SAUR-like auxin-responsive protein family [more]
AT5G18080.13.4e-2563.10 SAUR-like auxin-responsive protein family [more]
AT4G34790.14.4e-2554.63 SAUR-like auxin-responsive protein family [more]
BLAST of Lsi10G004420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206757|gb|KGN61876.1|4.2e-4695.88hypothetical protein Csa_2G258720 [Cucumis sativus][more]
gi|659115596|ref|XP_008457635.1|5.5e-4693.81PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|659115592|ref|XP_008457632.1|8.0e-4593.81PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|778674175|ref|XP_011650154.1|3.0e-4489.69PREDICTED: auxin-induced protein 15A-like [Cucumis sativus][more]
gi|700206761|gb|KGN61880.1|1.2e-4387.63hypothetical protein Csa_2G258760 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G004420.1Lsi10G004420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 13..93
score: 6.6
NoneNo IPR availablePANTHERPTHR31929FAMILY NOT NAMEDcoord: 2..97
score: 2.5
NoneNo IPR availablePANTHERPTHR31929:SF13SUBFAMILY NOT NAMEDcoord: 2..97
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi10G004420Csa2G258720Cucumber (Chinese Long) v2culsiB093
Lsi10G004420Cucsa.169400Cucumber (Gy14) v1cgylsiB281
Lsi10G004420Cucsa.169530Cucumber (Gy14) v1cgylsiB282
Lsi10G004420CmoCh11G017180Cucurbita moschata (Rifu)cmolsiB073
Lsi10G004420CmoCh20G007920Cucurbita moschata (Rifu)cmolsiB491
Lsi10G004420CmoCh02G003400Cucurbita moschata (Rifu)cmolsiB533
Lsi10G004420CsGy7G000460Cucumber (Gy14) v2cgyblsiB456
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi10G004420Lsi11G011690Bottle gourd (USVL1VR-Ls)lsilsiB021
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G004420Cucumber (Gy14) v2cgyblsiB086
Lsi10G004420Melon (DHL92) v3.6.1lsimedB056
Lsi10G004420Cucumber (Chinese Long) v3cuclsiB104
Lsi10G004420Watermelon (97103) v2lsiwmbB043
Lsi10G004420Wax gourdlsiwgoB080
Lsi10G004420Cucumber (Gy14) v1cgylsiB617
Lsi10G004420Cucurbita maxima (Rimu)cmalsiB089
Lsi10G004420Cucurbita maxima (Rimu)cmalsiB466
Lsi10G004420Cucurbita maxima (Rimu)cmalsiB507
Lsi10G004420Cucurbita maxima (Rimu)cmalsiB548
Lsi10G004420Cucurbita moschata (Rifu)cmolsiB451
Lsi10G004420Cucurbita moschata (Rifu)cmolsiB489
Lsi10G004420Cucurbita pepo (Zucchini)cpelsiB220
Lsi10G004420Cucurbita pepo (Zucchini)cpelsiB436
Lsi10G004420Cucurbita pepo (Zucchini)cpelsiB589
Lsi10G004420Wild cucumber (PI 183967)cpilsiB091
Lsi10G004420Wild cucumber (PI 183967)cpilsiB497
Lsi10G004420Cucumber (Chinese Long) v2culsiB489
Lsi10G004420Melon (DHL92) v3.5.1lsimeB054
Lsi10G004420Melon (DHL92) v3.5.1lsimeB064
Lsi10G004420Watermelon (Charleston Gray)lsiwcgB039
Lsi10G004420Watermelon (Charleston Gray)lsiwcgB057
Lsi10G004420Watermelon (97103) v1lsiwmB079
Lsi10G004420Watermelon (97103) v1lsiwmB084