Lsi10G004380 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6579118 .. 6579414 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA

mRNA sequence

ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA

Coding sequence (CDS)

ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA

Protein sequence

MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

Homology

[Close]

BLAST of Lsi10G004380 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-23
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 1


Query: 12 VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFG 71
          VAK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFG
Sbjct: 9  VAKKILSR---SAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFG 68

Query: 72 FSHPIGGLTIPCKEEAFIDITSRLH 97
          F HP+GGLTIPC E+ FI++TSRLH
Sbjct: 69 FDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Lsi10G004380 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 1


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL + + +    S  PKG + VYVG++++KR+ VP+SYLS PSF  LL ++EE
Sbjct: 7  LLG-AKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSRL 96
          EFGF+HP+GGLTIPC E+ FI++TSRL
Sbjct: 67 EFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004380 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL + + S+      PKG + VYVG++++KR+ VP+SYLS PSF  LL ++EE
Sbjct: 7  LLG-AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSRL 96
          EFGF HP+GGLTIPC E+ FI++TSRL
Sbjct: 67 EFGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Lsi10G004380 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-22
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 1


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EE
Sbjct: 7  LLG-AKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSRL 96
          EFGF HP+GGLTIPC E+ FI++TSRL
Sbjct: 67 EFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004380 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.3e-22
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 1


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL + + ++   S  PKG + VYVG++++KR+ VPISYL+ PSF  LL ++EE
Sbjct: 7  LLG-AKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSR 95
          EFGF HP+GGLTIPC E+ FI++TSR
Sbjct: 67 EFGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Lsi10G004380 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI  PSVLL  AKQILK +SVS RCQS+VPKGHIPVYVG+ +RKRFFVPISYL+HPSFV
Sbjct: 1  MGIRFPSVLLS-AKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38
Identity = 80/98 (81.63%), Postives = 89/98 (90.82%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV
Sbjct: 1  MGIRLPSVLLS-AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-37
Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MG  LPS+L   AKQILK QS+S RCQS+VPKGHI VYVG+ ++KRF VPISYL+HPSF+
Sbjct: 1  MGFRLPSILFS-AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFL 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL+RAEEEFGF+HP GGLTIPCKEEAFID+TSRLHTS
Sbjct: 61 DLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Lsi10G004380 vs. TrEMBL
Match: A0A0A0LJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.6e-37
Identity = 78/98 (79.59%), Postives = 87/98 (88.78%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVL   AKQ+LK QSVS+R QS VPKGHIPVYVG+T+RKRFFVPISYLSHPSFV
Sbjct: 1  MGIRLPSVL-AAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL +AEEEFGFSHP GGL IPCKEEAFID+TS+L +S
Sbjct: 61 ELLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 97

[Close]

BLAST of Lsi10G004380 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-35
Identity = 72/98 (73.47%), Postives = 86/98 (87.76%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI +PS+LL  AKQI + QSVS+RC SN+PKGHI VYVG+ ERKRF VP+SYL+HP+F+
Sbjct: 1  MGIRMPSLLLN-AKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFL 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
           LL RAEEEFGF+HP GGLTIPCKE+AFID+TS+LHTS
Sbjct: 61 SLLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of Lsi10G004380 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKK----QSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSH 60
          M I +P VL   +KQIL++     S SS    +VPKG++ VYVG+   KRF VP+SYL  
Sbjct: 1  MAIRIPRVLQS-SKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQ 60

Query: 61 PSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH 97
          PSF DLL++AEEEFGF HP+GGLTIPC EE FID+ SR +
Sbjct: 61 PSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Lsi10G004380 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25
Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 1


Query: 7  SVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKT-ERKRFFVPISYLSHPSFVDLLKR 66
          S +L  +KQ+LK  S SS   + +PKGH+ VYVG+  +++RF VP++YLSHP F  LL++
Sbjct: 6  SRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRK 65

Query: 67 AEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          AEEEFGF HP+GGLTIPC E+ FID+ SRL TS
Sbjct: 66 AEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Lsi10G004380 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.8e-25
Identity = 55/92 (59.78%), Postives = 71/92 (77.17%), Query Frame = 1


Query: 14  KQILKKQSVSSRCQSN------VPKGHIPVYVGKT---ERKRFFVPISYLSHPSFVDLLK 73
           KQILK  S+++R +++      VPKGH+ VYVG+    E+KRF VPIS+L+HPSF + L 
Sbjct: 13  KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 74  RAEEEFGFSHPIGGLTIPCKEEAFID-ITSRL 96
           RAEEEFGF+HP+GGLTIPC+EE F+D I SRL
Sbjct: 73  RAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of Lsi10G004380 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-24
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 1


Query: 12 VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFG 71
          VAK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFG
Sbjct: 9  VAKKILSR---SAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFG 68

Query: 72 FSHPIGGLTIPCKEEAFIDITSRLH 97
          F HP+GGLTIPC E+ FI++TSRLH
Sbjct: 69 FDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Lsi10G004380 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-23
Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 23 SSRCQSNVPKGHIPVYVGKT--ERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLT 82
          S + QS VPKGH+ VYVG+    +KRF VPISYL+HPSF  LL RAEEEFGF+HPIGGLT
Sbjct: 14 SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGLT 73

Query: 83 IPCKEEAFIDI 92
          IPC+EE F+ +
Sbjct: 74 IPCREETFVGL 84

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: gi|778669595|ref|XP_011649275.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI  PSVLL  AKQILK +SVS RCQS+VPKGHIPVYVG+ +RKRFFVPISYL+HPSFV
Sbjct: 1  MGIRFPSVLLS-AKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38
Identity = 80/98 (81.63%), Postives = 89/98 (90.82%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV
Sbjct: 1  MGIRLPSVLLS-AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 4.3e-38
Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV
Sbjct: 1  MGIRLPSVLLS-AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
           LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 HLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-37
Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MG  LPS+L   AKQILK QS+S RCQS+VPKGHI VYVG+ ++KRF VPISYL+HPSF+
Sbjct: 1  MGFRLPSILFS-AKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFL 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL+RAEEEFGF+HP GGLTIPCKEEAFID+TSRLHTS
Sbjct: 61 DLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 1


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MG  LPS+L   AKQILK QS+S RCQS+VPKGHI VYVG+ ++ RF VPISYL+HPSF+
Sbjct: 1  MGFRLPSILFS-AKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFL 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL+RAEEEFGF+HP GGLTIPCKEEAFID+TSRLHTS
Sbjct: 61 DLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

The following BLAST results are available for this feature:

BLAST of Lsi10G004380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	5.1e-23	57.65	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU19_ARATH	1.9e-22	57.47	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU21_ARATH	3.3e-22	57.47	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU24_ARATH	5.6e-22	57.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	7.3e-22	56.98	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]

BLAST of Lsi10G004380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLF7_CUCSA	1.0e-38	82.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	1.8e-38	81.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	1.9e-37	77.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LJ92_CUCSA	9.6e-37	79.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	1.8e-35	73.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]

BLAST of Lsi10G004380 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	5.2e-26	57.00	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	4.4e-25	58.06	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	9.8e-25	59.78	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	2.9e-24	57.65	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	1.1e-23	67.61	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669595\|ref\|XP_011649275.1\|	1.5e-38	82.65	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669591\|ref\|XP_011649272.1\|	2.5e-38	81.63	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115594\|ref\|XP_008457634.1\|	4.3e-38	81.63	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|449458550\|ref\|XP_004147010.1\|	2.8e-37	77.55	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115590\|ref\|XP_008457631.1\|	1.1e-36	76.53	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004380.1	Lsi10G004380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 20..94 score: 6.7
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..98 score: 3.3
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..98 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G004380	Csa2G258690	Cucumber (Chinese Long) v2	culsiB093
Lsi10G004380	CSPI02G12920	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G004380	Cucsa.169500	Cucumber (Gy14) v1	cgylsiB281
Lsi10G004380	Cla016625	Watermelon (97103) v1	lsiwmB084
Lsi10G004380	Bhi10G001527	Wax gourd	lsiwgoB080
Lsi10G004380	CsaV3_2G015480	Cucumber (Chinese Long) v3	cuclsiB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G004380	Watermelon (97103) v2	lsiwmbB043
Lsi10G004380	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi10G004380	Cucumber (Gy14) v1	cgylsiB617
Lsi10G004380	Cucurbita maxima (Rimu)	cmalsiB089
Lsi10G004380	Cucurbita maxima (Rimu)	cmalsiB466
Lsi10G004380	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G004380	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G004380	Cucurbita moschata (Rifu)	cmolsiB073
Lsi10G004380	Cucurbita moschata (Rifu)	cmolsiB451
Lsi10G004380	Cucurbita moschata (Rifu)	cmolsiB489
Lsi10G004380	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G004380	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G004380	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G004380	Cucurbita pepo (Zucchini)	cpelsiB436
Lsi10G004380	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G004380	Wild cucumber (PI 183967)	cpilsiB497
Lsi10G004380	Cucumber (Chinese Long) v2	culsiB489
Lsi10G004380	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G004380	Melon (DHL92) v3.5.1	lsimeB064
Lsi10G004380	Watermelon (Charleston Gray)	lsiwcgB039
Lsi10G004380	Watermelon (Charleston Gray)	lsiwcgB057
Lsi10G004380	Watermelon (97103) v1	lsiwmB079
Lsi10G004380	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G004380	Cucumber (Gy14) v2	cgyblsiB456
Lsi10G004380	Melon (DHL92) v3.6.1	lsimedB056