Csa2G258690 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G258690
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced SAUR-like protein; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr2 : 12564089 .. 12564629 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTCTCATTCAAACATTGAAGTTTACCACTTCCAAAAAGTTTCAATCCCATTATAGCCATGGGAATTCGTTTGCCTTCAGTTCTTGCAGCTGCCAAGCAAGTTCTCAAGATGCAGTCTGTCTCAGCAAGATCTCAGTCCATTGTTCCCAAAGGTCACATTCCAGTGTACGTGGGAGAAACCGACAGAAAGCGGTTTTTCGTTCCGATATCGTACTTGAGTCATCCTTCATTCGTAGAGTTGCTCAACAAGGCTGAAGAAGAGTTTGGATTCAGCCACCCAACTGGAGGTTTGAGAATTCCCTGCAAGGAAGAAGCCTTCATTGATGTTACTTCTAAATTGCAAAGTTCATGAATGATTTGAGAACAAGGAGCAATTCTCCTCACAGTTTTGACAATTTTTTTCTCTGTTCATTTTAGTGTACTACTTCGTATGTAAATGGTTAGATTAGAAAAACTGGAGAGTTACAAAGCCATTTGTACATCAATGACAAATATCAGTTGCAATGAAACATTTCTTGCTAACAAAGCCTTATTCATTA

mRNA sequence

ATGGGAATTCGTTTGCCTTCAGTTCTTGCAGCTGCCAAGCAAGTTCTCAAGATGCAGTCTGTCTCAGCAAGATCTCAGTCCATTGTTCCCAAAGGTCACATTCCAGTGTACGTGGGAGAAACCGACAGAAAGCGGTTTTTCGTTCCGATATCGTACTTGAGTCATCCTTCATTCGTAGAGTTGCTCAACAAGGCTGAAGAAGAGTTTGGATTCAGCCACCCAACTGGAGGTTTGAGAATTCCCTGCAAGGAAGAAGCCTTCATTGATGTTACTTCTAAATTGCAAAGTTCATGA

Coding sequence (CDS)

ATGGGAATTCGTTTGCCTTCAGTTCTTGCAGCTGCCAAGCAAGTTCTCAAGATGCAGTCTGTCTCAGCAAGATCTCAGTCCATTGTTCCCAAAGGTCACATTCCAGTGTACGTGGGAGAAACCGACAGAAAGCGGTTTTTCGTTCCGATATCGTACTTGAGTCATCCTTCATTCGTAGAGTTGCTCAACAAGGCTGAAGAAGAGTTTGGATTCAGCCACCCAACTGGAGGTTTGAGAATTCCCTGCAAGGAAGAAGCCTTCATTGATGTTACTTCTAAATTGCAAAGTTCATGA

Protein sequence

MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS*

Homology

[Close]

BLAST of Csa2G258690 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   S S  + S  PKG + VYVGE+ +KR+ VP+SYLS PSF  LL+K+EEE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF+HP GGL IPC E+ FI+VTS+LQ
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258690 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-21
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   + SA      PKG + VYVGE+ +KR+ VP+SYLS PSF  LL+K+EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF HP GGL IPC E+ FI+VTS+LQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Csa2G258690 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21
Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   + +A   S  PKG + VYVGE+ +KR+ VPISYL+ PSF  LL+K+EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF HP GGL IPC E+ FI+VTS+ Q
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Csa2G258690 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   S S  + S  PKG + VYVGE+ +KR+ VP+SYL+ PSF  LL+K+EEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF HP GGL IPC E+ FI+VTS+LQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258690 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.1e-21
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   S S  + S  PKG + VYVGE+ +KR+ VP+SYL+ PSF  LL+K+E+E
Sbjct: 7  LLGAKKIL---SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF HP GGL IPC E+ FI+VTS+LQ
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258690 vs. TrEMBL
Match: A0A0A0LJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE
Sbjct: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS
Sbjct: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 97

[Close]

BLAST of Csa2G258690 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.3e-37
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIR PSVL +AKQ+LKM+SVS R QS VPKGHIPVYVGE  RKRFFVPISYL+HPSFV 
Sbjct: 1  MGIRFPSVLLSAKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVN 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Csa2G258690 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.6e-37
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIRLPSVL +AKQ+LKM++VS R QS VPKGHIPVYVGE  RKRF VPISYL+HPSFV 
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Csa2G258690 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-34
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MG RLPS+L +AKQ+LK QS+S R QS VPKGHI VYVGE  +KRF VPISYL+HPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL +AEEEFGF+HPTGGL IPCKEEAFIDVTS+L +S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Csa2G258690 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-33
Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIR+PS+L  AKQ+ +MQSVS R  S +PKGHI VYVGE +RKRF VP+SYL+HP+F+ 
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LLN+AEEEFGF+HP+GGL IPCKE+AFID+TSKL +S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of Csa2G258690 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVL---KMQSVSARSQSI-VPKGHIPVYVGETDRKRFFVPISYLSHP 60
          M IR+P VL ++KQ+L   K+ S S+ S S+ VPKG++ VYVGE + KRF VP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVELLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSK 94
          SF +LL KAEEEFGF HP GGL IPC EE FID+ S+
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Csa2G258690 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGET-DRKRFFVPISYLSHPSFV 60
          M IR+  VL ++KQ+LK  S S+ + +I PKGH+ VYVGE   ++RF VP++YLSHP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVAI-PKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ELLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          +LL KAEEEFGF HP GGL IPC E+ FID+ S+L +S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Csa2G258690 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-24
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 1   MGIRLPSVLAAAKQVLKMQSVSARSQSI------VPKGHIPVYVGET---DRKRFFVPIS 60
           MG+   ++  A KQ+LK+ S++ R+++       VPKGH+ VYVGE    ++KRF VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLSHPSFVELLNKAEEEFGFSHPTGGLRIPCKEEAFID-VTSKLQ 96
           +L+HPSF E L++AEEEFGF+HP GGL IPC+EE F+D + S+LQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Csa2G258690 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 7.1e-23
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   S S  + S  PKG + VYVGE+ +KR+ VP+SYLS PSF  LL+K+EEE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF+HP GGL IPC E+ FI+VTS+LQ
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258690 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.2 bits (256), Expect = 9.2e-23
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 9  LAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVELLNKAEEE 68
          L  AK++L   + SA      PKG + VYVGE+ +KR+ VP+SYLS PSF  LL+K+EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLRIPCKEEAFIDVTSKLQ 96
          FGF HP GGL IPC E+ FI+VTS+LQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Csa2G258690 vs. NCBI nr
Match: gi|778669586|ref|XP_011649271.1| (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE
Sbjct: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS
Sbjct: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 97

[Close]

BLAST of Csa2G258690 vs. NCBI nr
Match: gi|778669595|ref|XP_011649275.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 4.7e-37
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIR PSVL +AKQ+LKM+SVS R QS VPKGHIPVYVGE  RKRFFVPISYL+HPSFV 
Sbjct: 1  MGIRFPSVLLSAKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVN 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Csa2G258690 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-36
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIRLPSVL +AKQ+LKM++VS R QS VPKGHIPVYVGE  RKRF VPISYL+HPSFV 
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVH 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Csa2G258690 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-36
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MGIRLPSVL +AKQ+LKM++VS R QS VPKGHIPVYVGE  RKRF VPISYL+HPSFV 
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Csa2G258690 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-34
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 1


Query: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60
          MG RLPS+L +AKQ+LK QS+S R QS VPKGHI VYVGE  +KRF VPISYL+HPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 98
          LL +AEEEFGF+HPTGGL IPCKEEAFIDVTS+L +S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

The following BLAST results are available for this feature:

BLAST of Csa2G258690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU19_ARATH	1.3e-21	58.62	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU21_ARATH	1.6e-21	57.47	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU20_ARATH	3.6e-21	56.32	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	3.6e-21	57.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	8.1e-21	56.32	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]

BLAST of Csa2G258690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ92_CUCSA	1.3e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1	[more]
A0A0A0LLF7_CUCSA	3.3e-37	81.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	9.6e-37	80.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	1.5e-34	74.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	3.8e-33	70.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]

BLAST of Csa2G258690 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	4.0e-26	59.79	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	3.4e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.2e-24	52.38	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	7.1e-23	58.62	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	9.2e-23	57.47	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa2G258690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669586\|ref\|XP_011649271.1\|	1.9e-46	100.00	PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]	[more]
gi\|778669595\|ref\|XP_011649275.1\|	4.7e-37	81.44	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115594\|ref\|XP_008457634.1\|	1.4e-36	80.41	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669591\|ref\|XP_011649272.1\|	1.4e-36	80.41	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|449458550\|ref\|XP_004147010.1\|	2.2e-34	74.23	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU110589	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G258690.1	Csa2G258690.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU110589	CU110589	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..92 score: 3.8
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.3
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G258690	Lsi10G004380	Bottle gourd (USVL1VR-Ls)	culsiB093
Csa2G258690	CSPI02G12920	Wild cucumber (PI 183967)	cpicuB065
Csa2G258690	Cucsa.169460	Cucumber (Gy14) v1	cgycuB257
Csa2G258690	CmaCh20G007880	Cucurbita maxima (Rimu)	cmacuB542
Csa2G258690	CmoCh20G007980	Cucurbita moschata (Rifu)	cmocuB531

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G258690	Melon (DHL92) v3.5.1	cumeB098
Csa2G258690	Watermelon (Charleston Gray)	cuwcgB104
Csa2G258690	Watermelon (97103) v1	cuwmB155
Csa2G258690	Cucurbita pepo (Zucchini)	cpecuB267
Csa2G258690	Cucurbita pepo (Zucchini)	cpecuB540
Csa2G258690	Cucurbita pepo (Zucchini)	cpecuB704
Csa2G258690	Cucumber (Gy14) v2	cgybcuB056
Csa2G258690	Cucumber (Gy14) v2	cgybcuB295
Csa2G258690	Melon (DHL92) v3.6.1	cumedB087
Csa2G258690	Melon (DHL92) v3.6.1	cumedB089
Csa2G258690	Silver-seed gourd	carcuB0341
Csa2G258690	Watermelon (97103) v2	cuwmbB110
Csa2G258690	Wax gourd	cuwgoB182
Csa2G258690	Cucumber (Chinese Long) v2	cucuB077
Csa2G258690	Cucurbita maxima (Rimu)	cmacuB541
Csa2G258690	Cucurbita maxima (Rimu)	cmacuB588
Csa2G258690	Cucurbita moschata (Rifu)	cmocuB577