Lsi10G002850 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G002850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	PLATZ transcription factor family protein
Location	chr10 : 4565213 .. 4571571 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAGCACCAACCAAAGCAGAAAAGGCATTTTTCTCCATAGCCCTACCTTTTTCTCTTCTTTCCATATTCTCTCTGTCACTTTCCCGAGAAAATTCCTCCCAGAGAAAACTGATCGGAGAGGTTAGAGAAATCCAAGCCGCAATCGTGAAAATCATGGTGAGCATTCGATTGAAATCGAAACCTCCATTGCTGAATCCGTCTCCAAATTCTCCGATTAATCTCGCTCTTCTTTCTCTTCTTTCTGAAATTTCTTGTGCTTTTTGTGATGAATTAGGGGAAAATCGGAGAAGTCGATCAGAACGAAGAGGAAGAAGAAGAAGAAGAAGGAGAAGGTGAAGGTGAAATTGAATGGCCGCCATGGATGGAACCTCTGCTAAGCACGAGCTTCTTCGTTCAATGCAAGCACCACGCCGATTCGCACAAAACTGAATGCAATATGTATTGCTTGGATTGTATGAACGGAGCTCTCTGTTCGCTCTGTCTTAATTCTCATAAAGATCATAGAGCTATTCAGGTACGCTCTGTTCTTCTTCTTCTTCTTCTTCTTGTTCTGTAAATTCTTTGAGATTCTTCGATTGGATTTTTTTTCGCAATTTCTTCAATTATTGGGTGATTTATTTTTATTTTTTTGGGAAGATTTAATTGTTTCTTCTTTGAATGAAGACAATGTAGAAATTACTGTTTGTTACCTACTAACAGCAACAAGATGCCAAATCATAACTATATAAACTGTGAAGTCTCTCTTTATCTTTATTTTGTTATTTTATTCTCTTCTTTTTCCTTTTTAAATGTTAAAGTGCCTGGTTGTTAAATTTTATAAAGTTACTTCTGATACTGAGGTAAAAAGTAAATAAAAAAAAAAACAAGTAAAAGGTAAAAATTAAAAAATTAACATATATATAGTAGTGAATGTTGGTTGATGGTTTTTTTAAAGATTTTAAGAAAAAAAACTTTGGAAGTATGATTACATTTGCTTCTGTTGGTTGATATTTATGATTTAGTTGAGATTAGTGAATATAAAAGATAAGCGGAGGAGGGTAAATGTTAATGATAATCTAATTGTTTAATTCCTTATATTTTTTTATCATTAATGTATCATGTCAATTCAATTAATATTTATTCGGATTAGATTTTGTTAATGATATATATGTTCTCAATATATTTTAGTATAGAGTTCATTTAGTGTAAATTAAATTGGAACTAGAAGATTAGGAGTCCAATCAATTTAAAAGTTTTGGTTCAAGAACATAGATCATCACTAAGATATTAGAAAAATGACAATGAAGAAAAGGTAGCTAAAATGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTAACCAAATTTCAATACTATACATCCTTATTTATTAACCTAAGATTATATATATATATATATATTCAAAAATTGAAATATCATCCTTAATCTTACATAACATTAAAATGTGTTGGATGAGAATCAAAAAACTTGGAACAACGACAATGTTCCAGGTCATTGTCACATTGTTCCATGTTTCAATTTTTATTCAACACATCTTAGTGGAATTTCTACTGCATAAGTAATTTTAAAAATATTTACCAAAAGTCACCAGCAATATTGCCATTTTTGTAGGAATAGGACTATTGTATAAACAAAGGACAAAAAGTTGAGTTTCTCTTTTTTTTTTTTTTAGTTTAGGCTTGAAAAAAAAAGACAAAATTACAGAAAATGTCAACGAACTTTGCCTTTTTGTTTCAAAAATATCCATGTACTTTAAAAAATTGCAATGTTACTCTTGAACTTTCATAAATGTTTAAAACTACCTTTAGAATTTTACATTTAAATCAGGACTTGAAACGATGTGGTGATGACCTAAAATAGTTCGGTGATCTAATTTTCCGTTCTAAGTCACTGCCACATCATTTCAAGTGCCATTTTTCGTAAAAAAGATTATAAAGAATTTTTACTACAGTATTAATTTTGAGACGTTTATGAATATTGATATATATATTTTGTGGAATATATATGTATATAGATAAGGAGATCGTCCTACCATGATGTGATAAGGGTATGTGAGATACAGAAATTTGTGGACATAAGAGGAGTTCAAACTTATATTATAAACAGTGCAAGGATTGTGTTCTTGAACGAGCGCCCTCAGCCGCGACCTGCTAAAGCTCTCACTAATATCTGCATCGTCTGCCACCGTTCGCTTCTTGATTCCTTCCATTTCTGCTCTCTTGGTTGCAAGGTTTTTCTTTTTCTCTTCTTTCATTGCTCGACTCTATAATTGCATGCCTTTGGTTGATTTATTTTACGCTAAATTATAAAAAAATGTCACTAAACTTTACATTTTCGGTTAAAAATACCTTTAAACTTTCAAAAAAGAGTTCAAAAATACTTTTATTGTTAGTTTAGAATGGAAACCGTTTTAAAGTTTTGTTTAAAAAATATCCCTAAATTTAAAAAAAATATATATATACTTTCATTATTAGTATATGAACAAAAAACGGTTAATATCTCGTTGAAAAAAATAACTCTAATTTTAAAAAAAAAGTTTAAAAATGTTCGTATCATTAATATGGTTATCAATTTGTTTGAAGTTTGTTTTAGTTCGAGAAAAATCAATTTTAAAATGAATTATATAGATATCCACTCTCACTTTTTTCTTATTTTTATAATTCTTACACTTAAATTTTCAGCAACTAAAATTTTAAGTAAACAAAAAAAAAACTCACAAAATTCGAATACGAAAATTCATTTAAAACATACCAAAACGATAAATAGTCAAATAAAAAATACATTTGACTATTAACACACACTCAACTACTAACATACAATTTTGTTAAAACATTTAAGTTCTAAACTCGCTTGGTGCTTCTATATTCTTTTTGGACTTATTATAGGTCATATACCTTAACTGAAGTGTGCAATTTTATTTATTTATTTATTTTTAGATATACAAATGTCAAACATTTAACGAAAAAGGAGTAGAATAGTATTGTAGAAGAGAGAAGAAAAAAAAGGAAAAATAGACAAGAAAGACGATATTAACGATTTTTGTTCATATAATAGTAATGATATTTTTGAATTTTTTTTTTAAAGCTTAGGAGTATTTTTGACACAAAACACTAATGGTTTTCTTTCAAAAAAAAACTAACAGTAAGGATATTTTTTAATTCATTTTGGAAGTTGGTATTTTTTAATTCATTTTGGAAGTTTAAGGGTATTTTGTATAATTTGGCCGTTATTTTATTTATCTTTTTATTGGGAAAAAAACATTTTGTTTCTTAAATTAACAATATATAAAAAAAATTACATCAAAATACTCTTTTAAAATTAAAGGTAAACTTTTTATGTTAGGTTTATTTTTACCTATTTATTATGCATTTTAGAGAGAGAGAGAAAAAAAGGGGTAAATTAGTTTTTTGTTTAACAAAAGCACGGGACAAAACTTAATTTGATTGTTTTTAAATTAATTTTTTTAACAATTTTGAAAATGTTTAGTGTTGAAAAAAATAGTGAAATTTAATTGTTTTTAAATTAATTAATAGACGGTTAATTAGAAAGTGAATATTTATTGAAAAATCAAATTTAAAATTAAAGTGAAAAAATTTTGAAATCTAGAGACCAAATTAAAATAGAACTCAAATATTAATGATAAAATTATAACATTTTGAAACTTAGGGACAAAATTGAAACTAAATTCAAAAATTAAGAATTAAAAGTGTAAAATTTTGAAACTTAATAATCAAATCAAAATTAGATGCAAAACTAAGGTAAAAAATCAATTGTATTTTAGAAGCATTTTTTCGAAAGTTATTTTAAATATGCTATTAATTATGTTTGTACATTATCTTTAGAGTAATTAGTATCAAGTTTAAAACCTCATGAATAGAAGTTAAAACATTTTTGAACGATAGGAGTATAATTGATATTAGGAGGCTTTTTTTTTTTTTTTTTTTTTTTAAAGGGGAAGGTTGTTTGAGTAATTTAACCAAGTATATATATGTTTAAAAGATTTATAGTGTTAATTAATTAAAAAGATAATGTCGATAATTTTAAAAATAATAAAAATACAACTAATACAACAATCTCTTCGATAATAATAATAATAATAAAAAAAAAAAACCTCATGATTTAAACCTTAATTATTGTATTTTTATAGATAATTTTTTTAAATGATAAAACAAACATAGCAAAATGTCACTGTCTATTAGTGATAGACATTGATAAACACCGATAGACATCTATGAGTGTCTATCATTATCCATCGTGACATTTTGCTATATTGTAAATATTTTGGCTCATTTTTCTATATTTAAAAACAACTCTATTTTTAGGGTGAAAATTTCTTATTCTTTTTTGTGGAGTGGGAGTTTGAAAAAATGAAAGTAGTCTTGAGAATTGAAGATGTTTGTGAGTTGTGTTGAAGTACTTTTAAAATTTAATATAATTATTCGAGTGATACGTTTCTTCAACCTAAATAACCCTTATTAAATAATGAACTCAACTCAACATTTAAAATTTTATTCTAAAAGTAAATAAAATATTAATATGTAAAAATCTTATTTAAATATTCTATATATATATATATATATATATATATATATATATATATATATATATATATTGAATTAAGATTAGCAAGTCAATTTCATTTTATATTATGAATTTTTTTTCTAAAGTACTAAAAAATTACTTTTTGAAAATAAAGGATCTAAAAAATGATAAAATTAAAATAAATATATGTATATATAATGTATCTTATATAAGTAAAAGATATGCTTTTTAAAATTAATAATAAGTTTTGGTTGATTGATATTGGTTTGTGTTATTTTAGGTGAACCCATGAACTAACTCAACCTATAGAATTTTTATTTATTTGAACCGAACCCAACTCAAATGAGTTAATAACTCGTCTCACATCATACGAGTTGAGTTGGGTTAGATTGATCGGATTTTTCGAGTGGTCGAATTTTTTTTTAAAAGTCCTTAACTATTAAGATTGGTGATAATGTAGCTTTCAAATTTTCAAATTGGATAAATAACACCCTTAAACAATAAAAGAAATATGCAATCACCTCATCATTAAATCAATTAATTTTACAAAGAAAATTATAAAACCTACCGTTTGATCCATCAGGAAAAAGACAGATTCAATTAAATAAACTCATGGCTTAATCATTATTATATAAAGTACAAATTAAAGCTAATTAATGAAAAATAAATTTAATTGTAGGAAAAGTATATTGAAAGTAAACTATTAATTATCCTCCATTAGTGGATGAGTCCCCACCTAAATAAAAGTCTAAATTACAAAAAAAAAAAACAATAATAATAATAATAATAAAATACATACTTTGAAGTGAAAATTCATTAGAATTTTGTATAAAAATTGGGATCATAAATAGTTAGGGTGGTATTCAGGTATCAATTTCTATTTCAAATCATCGACACCATTTTAGGTCGTAATTTTTATTTTAAAAAAAATTTTGAAATATTTATGAAACGTTAACCATTCCATGATAATTTTTTAAAGAATTTGAATATTTTTTAAGCAAAATTTTATAAAAATAATAGAATATATTTTTTAAAAAAAGATTAGATTATTAATAATTGAATAGTTTAACCTATTTACTATAGGTTTAGATATTTGAACCACAGACTTCTTTATTACAAACACGTTGATATATTAGTTGTTGCTTTAGAGAATAGTTGTTAGTTGATTGACAAATTATAATGAAATTATTTTATAATAAATACAGCTAATTGGGACATCAAAGAATTTTGGAAAAAGAGTAATAAATGTGGTGGAAAATGAAAGCTCCGACACCGAGAAATCGAAGACCGCCACCAGCAACAGAAGAAGACTTAGAAGCAAAATCCAAAGCTTCTCGCCGTCGACGCCACCGCCCACGGCGGCGACTCACAGAACCGGCAAGAGAAGGAAGGGAACACCGCACCGGTCTCCGATGGGAGGACTTCTCCTAGAATTTTAAATATTTATTATTATTTTTATAAAAAAAATATTAAAAACTCAAAAAGACGAAAATGCCCCCTACAGCCACCGACACATAAACACAGATTTGAGATCATTACTATTTTTGCAGCATCTGAGCCTTTGGCCAATGGTCAACGGAGGCCGTTGCTGTAAAACTAAAAAGTTACAGCTCTGTTATGTATAGTGTATAAGAAAAAGATGTATTTTGTTGTAATTTAATAATAAAAAATATTAAATTAAGAGAGAGAGAAATCATAATAATAATAATAATAATAATGTGTACTTGTTTGTGATTGTAGATTTGTTGAAACAAGCTATTTTATAAAAATAGCACATAAATTTGAATTAAATTATGAAAAATAATTTCACTTTTT

mRNA sequence

CGCAGCACCAACCAAAGCAGAAAAGGCATTTTTCTCCATAGCCCTACCTTTTTCTCTTCTTTCCATATTCTCTCTGTCACTTTCCCGAGAAAATTCCTCCCAGAGAAAACTGATCGGAGAGGTTAGAGAAATCCAAGCCGCAATCGTGAAAATCATGGGGAAAATCGGAGAAGTCGATCAGAACGAAGAGGAAGAAGAAGAAGAAGAAGGAGAAGGTGAAGGTGAAATTGAATGGCCGCCATGGATGGAACCTCTGCTAAGCACGAGCTTCTTCGTTCAATGCAAGCACCACGCCGATTCGCACAAAACTGAATGCAATATGTATTGCTTGGATTGTATGAACGGAGCTCTCTGTTCGCTCTGTCTTAATTCTCATAAAGATCATAGAGCTATTCAGAAATTTGTGGACATAAGAGGAGTTCAAACTTATATTATAAACAGTGCAAGGATTGTGTTCTTGAACGAGCGCCCTCAGCCGCGACCTGCTAAAGCTCTCACTAATATCTGCATCGTCTGCCACCGTTCGCTTCTTGATTCCTTCCATTTCTGCTCTCTTGGTTGCAAGCTAATTGGGACATCAAAGAATTTTGGAAAAAGAGTAATAAATGTGGTGGAAAATGAAAGCTCCGACACCGAGAAATCGAAGACCGCCACCAGCAACAGAAGAAGACTTAGAAGCAAAATCCAAAGCTTCTCGCCGTCGACGCCACCGCCCACGGCGGCGACTCACAGAACCGGCAAGAGAAGGAAGGGAACACCGCACCGGTCTCCGATGGGAGGACTTCTCCTAGAATTTTAAATATTTATTATTATTTTTATAAAAAAAATATTAAAAACTCAAAAAGACGAAAATGCCCCCTACAGCCACCGACACATAAACACAGATTTGAGATCATTACTATTTTTGCAGCATCTGAGCCTTTGGCCAATGGTCAACGGAGGCCGTTGCTGTAAAACTAAAAAGTTACAGCTCTGTTATGTATAGTGTATAAGAAAAAGATGTATTTTGTTGTAATTTAATAATAAAAAATATTAAATTAAGAGAGAGAGAAATCATAATAATAATAATAATAATAATGTGTACTTGTTTGTGATTGTAGATTTGTTGAAACAAGCTATTTTATAAAAATAGCACATAAATTTGAATTAAATTATGAAAAATAATTTCACTTTTT

Coding sequence (CDS)

ATGGGGAAAATCGGAGAAGTCGATCAGAACGAAGAGGAAGAAGAAGAAGAAGAAGGAGAAGGTGAAGGTGAAATTGAATGGCCGCCATGGATGGAACCTCTGCTAAGCACGAGCTTCTTCGTTCAATGCAAGCACCACGCCGATTCGCACAAAACTGAATGCAATATGTATTGCTTGGATTGTATGAACGGAGCTCTCTGTTCGCTCTGTCTTAATTCTCATAAAGATCATAGAGCTATTCAGAAATTTGTGGACATAAGAGGAGTTCAAACTTATATTATAAACAGTGCAAGGATTGTGTTCTTGAACGAGCGCCCTCAGCCGCGACCTGCTAAAGCTCTCACTAATATCTGCATCGTCTGCCACCGTTCGCTTCTTGATTCCTTCCATTTCTGCTCTCTTGGTTGCAAGCTAATTGGGACATCAAAGAATTTTGGAAAAAGAGTAATAAATGTGGTGGAAAATGAAAGCTCCGACACCGAGAAATCGAAGACCGCCACCAGCAACAGAAGAAGACTTAGAAGCAAAATCCAAAGCTTCTCGCCGTCGACGCCACCGCCCACGGCGGCGACTCACAGAACCGGCAAGAGAAGGAAGGGAACACCGCACCGGTCTCCGATGGGAGGACTTCTCCTAGAATTTTAA

Protein sequence

MGKIGEVDQNEEEEEEEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHRAIQKFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCHRSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFSPSTPPPTAATHRTGKRRKGTPHRSPMGGLLLEF

Homology

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BLAST of Lsi10G002850 vs. TrEMBL
Match: A0A0A0LR17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G445270 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-102
Identity = 193/231 (83.55%), Postives = 203/231 (87.88%), Query Frame = 1


Query: 1   MGKIGEVDQNEEEEEEEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLD 60
           M KIGE+D+N    EEEEGEGEGEIEWPPW+EPLLSTSFFVQCK+HADSHK+ECNMYCLD
Sbjct: 1   MEKIGEIDKN----EEEEGEGEGEIEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLD 60

Query: 61  CMNGALCSLCLNSHKDHRA----------------IQKFVDIRGVQTYIINSARIVFLNE 120
           CMNGALCSLCLNSHKDHRA                IQKFVDI GVQTYIINSARIVFLNE
Sbjct: 61  CMNGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNE 120

Query: 121 RPQPRPAKALTNICIVCHRSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSK 180
           RPQPRP+KALTNIC+VCHRSLLDSFHFCSLGCKLIGTSKN GK++I VVENESSDTEKSK
Sbjct: 121 RPQPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNNGKKIIKVVENESSDTEKSK 180

Query: 181 TATSNRRR-LRSKIQSFSPSTPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           T+ SNR R LRSKIQSFSPSTPPPTAATHRT KRRKGTPHRSPMGGLLLEF
Sbjct: 181 TSGSNRGRILRSKIQSFSPSTPPPTAATHRTAKRRKGTPHRSPMGGLLLEF 227

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BLAST of Lsi10G002850 vs. TrEMBL
Match: B9S255_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1327780 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.2e-73
Identity = 137/212 (64.62%), Postives = 161/212 (75.94%), Query Frame = 1


Query: 19  GEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHR 78
           G  + +++WPPW+ PLL TSFFVQCK HAD+HK+ECNMYCLDCMNGALCSLCL+ HK+HR
Sbjct: 40  GGDKDDVKWPPWLRPLLQTSFFVQCKLHADAHKSECNMYCLDCMNGALCSLCLSYHKEHR 99

Query: 79  AIQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCH 138
           AIQ                K++DI GVQTYIINSARIVFLNERPQPRP K +TN C VC 
Sbjct: 100 AIQIRRSSYHDVIRVSEIQKYLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQVCE 159

Query: 139 RSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFSP 198
           RSLLDSF FCSLGCK++GTSKNF K+ +   E E SDTE+S      +   +SKIQSF+P
Sbjct: 160 RSLLDSFSFCSLGCKIVGTSKNFRKKKMR-KEIEGSDTEESMNNGIGKGSPKSKIQSFTP 219

Query: 199 STPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           STPPPTA  +RT KRRKG PHRSPMGG ++E+
Sbjct: 220 STPPPTAVNYRTAKRRKGVPHRSPMGGFIIEY 250

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BLAST of Lsi10G002850 vs. TrEMBL
Match: F6HED6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01560 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.2e-73
Identity = 143/217 (65.90%), Postives = 167/217 (76.96%), Query Frame = 1


Query: 16  EEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHK 75
           EEEGE E E +WPPW+ PLL TSFFVQCK HADSH++ECNMYCLDCMNGALCSLCLN HK
Sbjct: 16  EEEGEEEVESKWPPWLRPLLQTSFFVQCKLHADSHRSECNMYCLDCMNGALCSLCLNFHK 75

Query: 76  DHRAIQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICI 135
           DHRAIQ                KF+DI GVQTYIINSARIVFLNERPQPRP K +TN C 
Sbjct: 76  DHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQ 135

Query: 136 VCHRSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATS-NRRRLRSKIQ 195
           VC RSLLDSF FCSLGCK++GTSK+F K+ +  +E E SD+E    A+S +    +SKI 
Sbjct: 136 VCERSLLDSFTFCSLGCKIVGTSKSFRKKKL-CMETEGSDSESLNGASSGSGSSSKSKIP 195

Query: 196 SFSPSTPPPT-AATHRTGKRRKGTPHRSPMGGLLLEF 215
           SF+PSTPPPT AAT+RT KRRKG PHR+P+G L++++
Sbjct: 196 SFTPSTPPPTAAATYRTAKRRKGVPHRAPLGALIIQY 231

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BLAST of Lsi10G002850 vs. TrEMBL
Match: A5BU40_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016796 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-72
Identity = 135/212 (63.68%), Postives = 160/212 (75.47%), Query Frame = 1


Query: 19  GEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHR 78
           G  E +  WPPW++PLL  SFFVQCK HADSHK+ECNMYCLDCMNGALCSLCL  HKDHR
Sbjct: 32  GPDEEDNRWPPWLKPLLRESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLGYHKDHR 91

Query: 79  AIQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCH 138
           AIQ                K +DI GVQTYIINSAR+VFLNERPQPRP K +TN C VC 
Sbjct: 92  AIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 151

Query: 139 RSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFSP 198
           RSLLDSF FCSLGCK++GTS NF K+        SSD+E+S +++S+ R+ ++ +QSFSP
Sbjct: 152 RSLLDSFRFCSLGCKIVGTSTNFQKKKHQQPATASSDSEESYSSSSHGRQAQNAVQSFSP 211

Query: 199 STPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           STPPPTA  +RT KRRKG PHR+PMGGL++E+
Sbjct: 212 STPPPTAVNYRTAKRRKGIPHRAPMGGLIIEY 243

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BLAST of Lsi10G002850 vs. TrEMBL
Match: A0A0B0MRL1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_25875 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.4e-72
Identity = 137/207 (66.18%), Postives = 157/207 (75.85%), Query Frame = 1


Query: 24  EIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHRAIQ-- 83
           E++WPPW+ PLL TSFFVQCK HAD+HK+ECNMYCLDCMNGALCSLCL  HKDHRAIQ  
Sbjct: 34  EVKWPPWLRPLLQTSFFVQCKLHADAHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIR 93

Query: 84  --------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCHRSLLD 143
                         KFVDI G+QTYIINSARIVFLNERPQPRP K +TN C VC RSLLD
Sbjct: 94  RSSYHDVIRVSEIQKFVDITGIQTYIINSARIVFLNERPQPRPGKGVTNTCQVCERSLLD 153

Query: 144 SFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFSPSTPPP 203
           SF+FCSLGCK++GTSKNF ++     E + SD E S    SN    +SK+QSF PSTPPP
Sbjct: 154 SFNFCSLGCKIVGTSKNFIRKKKMCKETDGSDAE-SLNGVSN-GSTKSKVQSFRPSTPPP 213

Query: 204 TAATHRTGKRRKGTPHRSPMGGLLLEF 215
           TA  +RT KRRKG PHR+PMGGL++E+
Sbjct: 214 TAVNYRTAKRRKGVPHRAPMGGLIIEY 238

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BLAST of Lsi10G002850 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein)

HSP 1 Score: 228.0 bits (580), Expect = 5.4e-60
Identity = 118/214 (55.14%), Postives = 144/214 (67.29%), Query Frame = 1


Query: 20  EGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHRA 79
           E E    +P W++PLL   FFVQCK HADSHK+ECNMYCLDC NG LCSLCL+ HKDH A
Sbjct: 4   EEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHA 63

Query: 80  IQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCHR 139
           IQ                KF+DI GVQTY+INSA++VFLNERPQPRP K + N C VC+R
Sbjct: 64  IQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYR 123

Query: 140 SLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKI---QSF 199
           SL+DSF FCSLGCK+ G SK   K   N +    SD++ S ++TS  R  ++      SF
Sbjct: 124 SLVDSFRFCSLGCKISGISKKKRKEWTNNL----SDSDDSYSSTSIGRLKKNDDIMNNSF 183

Query: 200 SPSTPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           +PSTPP +A   R  KRRKG PHR+P GGL++E+
Sbjct: 184 TPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

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BLAST of Lsi10G002850 vs. TAIR10
Match: AT4G17900.1 (AT4G17900.1 PLATZ transcription factor family protein)

HSP 1 Score: 227.3 bits (578), Expect = 9.2e-60
Identity = 118/208 (56.73%), Postives = 143/208 (68.75%), Query Frame = 1


Query: 19  GEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHR 78
           G  E E  WPPW++PLL   FFV CK H DSHK+ECNMYCLDC NG LCSLCL  HKDHR
Sbjct: 25  GPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHR 84

Query: 79  A----------------IQKFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCH 138
                            IQK++DI G+QTY+INSA++VFLNERPQPRP K +TN C VC+
Sbjct: 85  TIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCY 144

Query: 139 RSLL-DSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFS 198
           RSL+ DSF FCSLGCK+ GTS+ F K      EN   +TE S ++ +  + + + +QSFS
Sbjct: 145 RSLVDDSFRFCSLGCKIAGTSRGFEKG----RENLLMETEDSSSSIAIGKNI-TNLQSFS 204

Query: 199 PSTPPPTAATH-RTGKRRKGTPHRSPMG 209
           PSTPP T +++ R  KRRKG PHRSPMG
Sbjct: 205 PSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

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BLAST of Lsi10G002850 vs. TAIR10
Match: AT5G46710.1 (AT5G46710.1 PLATZ transcription factor family protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 98/221 (44.34%), Postives = 130/221 (58.82%), Query Frame = 1


Query: 10  NEEEEEEEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSL 69
           N E + +     EGE +WP W++PLL+  FF QCK H    +TEC MYCLDC N + CSL
Sbjct: 10  NREIKPKNRRFMEGENQWPIWLKPLLNQHFFAQCKFHGHLPRTECKMYCLDCTNDSFCSL 69

Query: 70  CLNSHKDHRA----------------IQKFVDIRGVQTYIINSARIVFLNERPQPRPAKA 129
           CL+ H++HR                 IQK++DI  +QTY+INS++++FLNERPQ +P K 
Sbjct: 70  CLSEHENHRTIQIRISSYHNVTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQSKPGKG 129

Query: 130 LTNICIVCHRSLLDS-FHFCSLGCKLIGTSKNFGKRVINVV-----ENESSDTEKSKTAT 189
            TN C+VC+R L ++ F FCS+GCK+ GTS  F KRV +        N SS  E + +  
Sbjct: 130 FTNACMVCYRGLAENCFRFCSIGCKVAGTSGVFQKRVKHTTNDSDNSNNSSGVENNSSGA 189

Query: 190 SNRRRLRSKIQSFSPSTP--PPTAATHRTGKRRKGTPHRSP 207
            N     S +QS SP TP  PP +   R    RKG PHR+P
Sbjct: 190 ENG---NSNLQSLSPPTPQFPPRSLRKRL---RKGIPHRAP 224

[Close]

BLAST of Lsi10G002850 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein)

HSP 1 Score: 171.8 bits (434), Expect = 4.6e-43
Identity = 106/256 (41.41%), Postives = 129/256 (50.39%), Query Frame = 1


Query: 4   IGEVDQNEEEEEEEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMN 63
           +G + + EEEE+            PPW+ P+L  S+FV C  H DS+K ECN++CLDC  
Sbjct: 1   MGPMIRTEEEEDYTS---------PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAG 60

Query: 64  GALCSLCLNSHKDHRA----------------IQKFVDIRGVQTYIINSARIVFLNERPQ 123
            A CS CL  HKDHR                 IQKF+DI  VQTYIINSA+IVFLNERPQ
Sbjct: 61  NAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQ 120

Query: 124 PRPAKALTNICIVCHRSLLDSFHFCSLGCKLIGTSK-----------NFGKRVINVVENE 183
           PR  K +TN C +C RSLLDSF FCSLGCKL G  +             G+  +   E++
Sbjct: 121 PRIGKGVTNTCEICCRSLLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESD 180

Query: 184 SSDTEKSKTATSNRRRLRSKIQ--------------------------SFSPSTPPPTAA 207
            + T      T+   RL S +                           SFSP TPP    
Sbjct: 181 EATTPTKMRKTNAFNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IY 240

[Close]

BLAST of Lsi10G002850 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41
Identity = 96/229 (41.92%), Postives = 120/229 (52.40%), Query Frame = 1


Query: 28  PPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHRA-------- 87
           PPW+ P+L  ++F+ C  HA S+K+ECNM+CLDC + A CS CL +H++HR         
Sbjct: 18  PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRRSSY 77

Query: 88  --------IQKFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCHRSLLDSFHF 147
                   IQK++DI  VQTYIINSARIVFLNERPQPR  K +TN C +C RSLLDSF F
Sbjct: 78  HNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRF 137

Query: 148 CSLGCKLIGTSKN----------FGKRVINVVENESSDTEKSKTATSNRRRLRSKIQ--- 207
           CSLGCKL G  ++           G+      E++ + T      T    RL S +    
Sbjct: 138 CSLGCKLGGMKRDPSLTFSLRGKHGREYEGEWESDEATTPTKIRKTCAFNRLMSGLSIST 197

[Close]

BLAST of Lsi10G002850 vs. NCBI nr
Match: gi|659118521|ref|XP_008459164.1| (PREDICTED: uncharacterized protein LOC103498364 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 6.4e-103
Identity = 191/231 (82.68%), Postives = 205/231 (88.74%), Query Frame = 1


Query: 1   MGKIGEVDQNEEEEEEEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLD 60
           M KIGE+D+N    EEEEGEGEGEIEWPPW+EPLLST+FFVQCK+HADSHK+ECNMYCLD
Sbjct: 1   MEKIGEIDKN----EEEEGEGEGEIEWPPWLEPLLSTNFFVQCKNHADSHKSECNMYCLD 60

Query: 61  CMNGALCSLCLNSHKDHRA----------------IQKFVDIRGVQTYIINSARIVFLNE 120
           CMNGA+CSLCLNSHKDHRA                IQKFVDI GVQTYIINSARIVFLNE
Sbjct: 61  CMNGAICSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNE 120

Query: 121 RPQPRPAKALTNICIVCHRSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSK 180
           RPQPRP+KALTNIC+VCHRSLLDSFHFCSLGCKLIGTSKN+GK++I VVENESSDTEKSK
Sbjct: 121 RPQPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNYGKKIIKVVENESSDTEKSK 180

Query: 181 TATSNRRR-LRSKIQSFSPSTPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           T++SNR R LRSKIQSFSPSTPPPTAATHRT KRRKGTPHRSPMGGLLLEF
Sbjct: 181 TSSSNRGRILRSKIQSFSPSTPPPTAATHRTAKRRKGTPHRSPMGGLLLEF 227

[Close]

BLAST of Lsi10G002850 vs. NCBI nr
Match: gi|449460690|ref|XP_004148078.1| (PREDICTED: uncharacterized protein LOC101216747 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 193/231 (83.55%), Postives = 203/231 (87.88%), Query Frame = 1


Query: 1   MGKIGEVDQNEEEEEEEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLD 60
           M KIGE+D+N    EEEEGEGEGEIEWPPW+EPLLSTSFFVQCK+HADSHK+ECNMYCLD
Sbjct: 1   MEKIGEIDKN----EEEEGEGEGEIEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLD 60

Query: 61  CMNGALCSLCLNSHKDHRA----------------IQKFVDIRGVQTYIINSARIVFLNE 120
           CMNGALCSLCLNSHKDHRA                IQKFVDI GVQTYIINSARIVFLNE
Sbjct: 61  CMNGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNE 120

Query: 121 RPQPRPAKALTNICIVCHRSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSK 180
           RPQPRP+KALTNIC+VCHRSLLDSFHFCSLGCKLIGTSKN GK++I VVENESSDTEKSK
Sbjct: 121 RPQPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNNGKKIIKVVENESSDTEKSK 180

Query: 181 TATSNRRR-LRSKIQSFSPSTPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           T+ SNR R LRSKIQSFSPSTPPPTAATHRT KRRKGTPHRSPMGGLLLEF
Sbjct: 181 TSGSNRGRILRSKIQSFSPSTPPPTAATHRTAKRRKGTPHRSPMGGLLLEF 227

[Close]

BLAST of Lsi10G002850 vs. NCBI nr
Match: gi|255558091|ref|XP_002520074.1| (PREDICTED: uncharacterized protein LOC8280509 isoform X1 [Ricinus communis])

HSP 1 Score: 282.0 bits (720), Expect = 9.0e-73
Identity = 137/212 (64.62%), Postives = 161/212 (75.94%), Query Frame = 1


Query: 19  GEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHR 78
           G  + +++WPPW+ PLL TSFFVQCK HAD+HK+ECNMYCLDCMNGALCSLCL+ HK+HR
Sbjct: 40  GGDKDDVKWPPWLRPLLQTSFFVQCKLHADAHKSECNMYCLDCMNGALCSLCLSYHKEHR 99

Query: 79  AIQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCH 138
           AIQ                K++DI GVQTYIINSARIVFLNERPQPRP K +TN C VC 
Sbjct: 100 AIQIRRSSYHDVIRVSEIQKYLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQVCE 159

Query: 139 RSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFSP 198
           RSLLDSF FCSLGCK++GTSKNF K+ +   E E SDTE+S      +   +SKIQSF+P
Sbjct: 160 RSLLDSFSFCSLGCKIVGTSKNFRKKKMR-KEIEGSDTEESMNNGIGKGSPKSKIQSFTP 219

Query: 199 STPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           STPPPTA  +RT KRRKG PHRSPMGG ++E+
Sbjct: 220 STPPPTAVNYRTAKRRKGVPHRSPMGGFIIEY 250

[Close]

BLAST of Lsi10G002850 vs. NCBI nr
Match: gi|225454704|ref|XP_002271206.1| (PREDICTED: uncharacterized protein LOC100261275 [Vitis vinifera])

HSP 1 Score: 281.6 bits (719), Expect = 1.2e-72
Identity = 143/217 (65.90%), Postives = 167/217 (76.96%), Query Frame = 1


Query: 16  EEEGEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHK 75
           EEEGE E E +WPPW+ PLL TSFFVQCK HADSH++ECNMYCLDCMNGALCSLCLN HK
Sbjct: 16  EEEGEEEVESKWPPWLRPLLQTSFFVQCKLHADSHRSECNMYCLDCMNGALCSLCLNFHK 75

Query: 76  DHRAIQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICI 135
           DHRAIQ                KF+DI GVQTYIINSARIVFLNERPQPRP K +TN C 
Sbjct: 76  DHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQ 135

Query: 136 VCHRSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATS-NRRRLRSKIQ 195
           VC RSLLDSF FCSLGCK++GTSK+F K+ +  +E E SD+E    A+S +    +SKI 
Sbjct: 136 VCERSLLDSFTFCSLGCKIVGTSKSFRKKKL-CMETEGSDSESLNGASSGSGSSSKSKIP 195

Query: 196 SFSPSTPPPT-AATHRTGKRRKGTPHRSPMGGLLLEF 215
           SF+PSTPPPT AAT+RT KRRKG PHR+P+G L++++
Sbjct: 196 SFTPSTPPPTAAATYRTAKRRKGVPHRAPLGALIIQY 231

[Close]

BLAST of Lsi10G002850 vs. NCBI nr
Match: gi|147833550|emb|CAN63851.1| (hypothetical protein VITISV_016796 [Vitis vinifera])

HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72
Identity = 135/212 (63.68%), Postives = 160/212 (75.47%), Query Frame = 1


Query: 19  GEGEGEIEWPPWMEPLLSTSFFVQCKHHADSHKTECNMYCLDCMNGALCSLCLNSHKDHR 78
           G  E +  WPPW++PLL  SFFVQCK HADSHK+ECNMYCLDCMNGALCSLCL  HKDHR
Sbjct: 32  GPDEEDNRWPPWLKPLLRESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLGYHKDHR 91

Query: 79  AIQ----------------KFVDIRGVQTYIINSARIVFLNERPQPRPAKALTNICIVCH 138
           AIQ                K +DI GVQTYIINSAR+VFLNERPQPRP K +TN C VC 
Sbjct: 92  AIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 151

Query: 139 RSLLDSFHFCSLGCKLIGTSKNFGKRVINVVENESSDTEKSKTATSNRRRLRSKIQSFSP 198
           RSLLDSF FCSLGCK++GTS NF K+        SSD+E+S +++S+ R+ ++ +QSFSP
Sbjct: 152 RSLLDSFRFCSLGCKIVGTSTNFQKKKHQQPATASSDSEESYSSSSHGRQAQNAVQSFSP 211

Query: 199 STPPPTAATHRTGKRRKGTPHRSPMGGLLLEF 215
           STPPPTA  +RT KRRKG PHR+PMGGL++E+
Sbjct: 212 STPPPTAVNYRTAKRRKGIPHRAPMGGLIIEY 243

The following BLAST results are available for this feature:

BLAST of Lsi10G002850 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G002850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR17_CUCSA	1.3e-102	83.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G445270 PE=4 SV=1	[more]
B9S255_RICCO	6.2e-73	64.62	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1327780 PE=4 SV=1	[more]
F6HED6_VITVI	8.2e-73	65.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01560 PE=4 SV=...	[more]
A5BU40_VITVI	1.8e-72	63.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016796 PE=4 SV=1	[more]
A0A0B0MRL1_GOSAR	2.4e-72	66.18	Uncharacterized protein OS=Gossypium arboreum GN=F383_25875 PE=4 SV=1	[more]

BLAST of Lsi10G002850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32700.1	5.4e-60	55.14	PLATZ transcription factor family protein	[more]
AT4G17900.1	9.2e-60	56.73	PLATZ transcription factor family protein	[more]
AT5G46710.1	1.9e-44	44.34	PLATZ transcription factor family protein	[more]
AT1G21000.1	4.6e-43	41.41	PLATZ transcription factor family protein	[more]
AT1G76590.1	1.5e-41	41.92	PLATZ transcription factor family protein	[more]

BLAST of Lsi10G002850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118521\|ref\|XP_008459164.1\|	6.4e-103	82.68	PREDICTED: uncharacterized protein LOC103498364 [Cucumis melo]	[more]
gi\|449460690\|ref\|XP_004148078.1\|	1.9e-102	83.55	PREDICTED: uncharacterized protein LOC101216747 [Cucumis sativus]	[more]
gi\|255558091\|ref\|XP_002520074.1\|	9.0e-73	64.62	PREDICTED: uncharacterized protein LOC8280509 isoform X1 [Ricinus communis]	[more]
gi\|225454704\|ref\|XP_002271206.1\|	1.2e-72	65.90	PREDICTED: uncharacterized protein LOC100261275 [Vitis vinifera]	[more]
gi\|147833550\|emb\|CAN63851.1\|	2.6e-72	63.68	hypothetical protein VITISV_016796 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G002850.1	Lsi10G002850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 78..138 score: 5.6
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 6..214 score: 1.4E
None	No IPR available	PANTHER	PTHR31065:SF8	SUBFAMILY NOT NAMED	coord: 6..214 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G002850	Csa2G445270	Cucumber (Chinese Long) v2	culsiB094
Lsi10G002850	CSPI02G27960	Wild cucumber (PI 183967)	cpilsiB092
Lsi10G002850	Cucsa.318510	Cucumber (Gy14) v1	cgylsiB520
Lsi10G002850	CmaCh20G009000	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G002850	CmaCh02G004490	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G002850	CmoCh02G004580	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G002850	CmoCh20G009080	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G002850	Cla010241	Watermelon (97103) v1	lsiwmB043
Lsi10G002850	MELO3C021855	Melon (DHL92) v3.5.1	lsimeB047
Lsi10G002850	ClCG09G017220	Watermelon (Charleston Gray)	lsiwcgB034
Lsi10G002850	MELO3C021855.2	Melon (DHL92) v3.6.1	lsimedB049
Lsi10G002850	Cla97C09G178750	Watermelon (97103) v2	lsiwmbB070
Lsi10G002850	Bhi10G001743	Wax gourd	lsiwgoB074
Lsi10G002850	Cp4.1LG05g12130	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G002850	Cp4.1LG16g01960	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G002850	CsGy2G027410	Cucumber (Gy14) v2	cgyblsiB087
Lsi10G002850	Carg23608	Silver-seed gourd	carlsiB731
Lsi10G002850	Carg24052	Silver-seed gourd	carlsiB961
Lsi10G002850	CsaV3_2G036660	Cucumber (Chinese Long) v3	cuclsiB105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G002850	Melon (DHL92) v3.6.1	lsimedB059