Carg23608 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23608
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PLATZ transcription factor family protein
Location	Cucurbita_argyrosperma_scaffold_182 : 77796 .. 79783 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGAATTCGATCCAAATCGGAACACCTCCATTGCCGAATCGGTTACCTAATTCTTCTATCGATCGATTGATCGATCGCGCTCTTTTTCCTGAAATTTCTTCCGATTTTGCGTTGAATTAGGTCAAAATAGGAGAAATCGACCAGAAAGAGGAAGAACAAGAAGAAGAAGAGGAAGAAGATGAAGTTGAATGGCCGCCATGGCTGGAACCTCTGCTGAGCACGAGCTTCTTCGTTCAATGCAAGCTGCACGCGGATTCGCACAAAAGTGAATGCAATATGTATTGCTTGGATTGCGTGAACGGAGCTCTCTGTTCGCTCTGTCTTGATTCGCATCGAGATCACAGAGCCATTCAGGTATGCTCTGTTCTTTGAGATTCTTTCGCTTTCGTGTTGCGAAGAATTTCTTCAATTATTGAATTTTCTTTTTTTAATTTTGATTTTTTGGAAAATATTTAATTGAAGCCTACGTGGAAATTACTGTTTGTTACCTACTAACAGCAACAAGATGTCAAATCATAACTATATTAACTGTGAAAGTCTCTCTTTATCTTTATTTTATTATTTTATTATTTTCTCTTTCTTTCTCCAATCAAGAGGTTGTTGCTAAATTTTGAAAAGTTACTTCTCTGTTTCCAGGTAAAGGTAAAAAAGTAAAAAGTAAAAAATAATTTGTATCAATTAATATTTAAATCCGAGTCTTTTCCCTACCACATATTTCAATCTCTATTTCAAAATTTTAATTTATTTTCGTGAATGTTTTTTTTATATATATATATATTTTTAAAGAATATTTCTAATAAATAATTTTTATCTTTTAATATAATTTCAATATATATATATATATATATATATATATATATATATAAAAGTTTTGCTCTCGACTCAGTTTAGTTAATATATTGTTTTCTCCTCCATTTTTCCAACTTGGGAGAGTTTATCGGCTCGTGAATTAAATGAATGTTTTTAGTTAAAAATTATTGTGTTTTTGGGTAATGGAATACAGATAAGGAGATCGTCGTACCATGATGTGATAAGAGTATGCGAGATACAGAAATATGTGGACATAACAGGAGTCCAAACTTACATCATAAATAGTGCGAGGATCGTGTTCTTGAACGAGCGCCCTCAGACACGTCCTTCGAAAGCTCTCACTAACATCTGCCTTGTTTGCCACCGTTCCCTTCTTCATTCCTTCCATTTCTGCTCTCTTGGCTGCAAGGTTTTTCTTTCCACCTTTTTCTTATTCATTTCTATGCTCTTCTCTCCTTTTGAAAATGTTTTTCGAAAATCATTAAAAAAGAAAAAACCCCGAGTAAATATGTTCTTATTTTGTTTATATTTTGATTTGGAGACAGATATGATCTATGAACTTTTAGATAGATTATGAAGAATTGCTTTGCGCATAAATTGAAACGTGAAGGTGTTTTGAGTAATTTGATCTTAAGAGGATATTTGAAATTATGAGTCGAGTTATTAAATATGTAGCGGTTAATATCATGACTTGTAGATCGATATTTTCGTTTTTATGAATTTTTCATTTTCTTATAAATAATATCGAACGGTTGAAATAAATGTGAATTTATATTTTATAAATACAGCTAATTGGGACGTCGAGAAATTTTGAGAAAAAGGAGAAAGTGATGGAAAACGAAAGCTCGGACACCGCCACGAGCAACAGAAGAAGGCTTAGAAGCAAAATCCAAAGCTTCTCGCCGGCGACGCCACCACCCACGGCGGCGGCGACTCACAAAGCTGGCAAGAGAAGGAAGGGAACGCCACATCGATCCCCAATGGGAGGACTTCTCTTAGAATTTTAAATATTTATTATTAGTACGAAAAGACGAAAATACCCCTTACAACCACCACCGACGCATAAGCCCAAATTATTACTATTTTTTGCAGCATCTGAGCCTTTGGCCAACGGTTAACGGAGGCCGTTGCTGTAAATGTCACATCTCTGTTACATATATAGTGCATAAGAAA

mRNA sequence

ATGGTCAAAATAGGAGAAATCGACCAGAAAGAGGAAGAACAAGAAGAAGAAGAGGAAGAAGATGAAGTTGAATGGCCGCCATGGCTGGAACCTCTGCTGAGCACGAGCTTCTTCGTTCAATGCAAGCTGCACGCGGATTCGCACAAAAGTGAATGCAATATGTATTGCTTGGATTGCGTGAACGGAGCTCTCTGTTCGCTCTGTCTTGATTCGCATCGAGATCACAGAGCCATTCAGATAAGGAGATCGTCGTACCATGATGTGATAAGAGTATGCGAGATACAGAAATATGTGGACATAACAGGAGTCCAAACTTACATCATAAATAGTGCGAGGATCGTGTTCTTGAACGAGCGCCCTCAGACACGTCCTTCGAAAGCTCTCACTAACATCTGCCTTGTTTGCCACCGTTCCCTTCTTCATTCCTTCCATTTCTGCTCTCTTGGCTGCAAGCTAATTGGGACGTCGAGAAATTTTGAGAAAAAGGAGAAAGTGATGGAAAACGAAAGCTCGGACACCGCCACGAGCAACAGAAGAAGGCTTAGAAGCAAAATCCAAAGCTTCTCGCCGGCGACGCCACCACCCACGGCGGCGGCGACTCACAAAGCTGGCAAGAGAAGGAAGGGAACGCCACATCGATCCCCAATGGGAGGACTTCTCTTAGAATTTTAAATATTTATTATTAGTACGAAAAGACGAAAATACCCCTTACAACCACCACCGACGCATAAGCCCAAATTATTACTATTTTTTGCAGCATCTGAGCCTTTGGCCAACGGTTAACGGAGGCCGTTGCTGTAAATGTCACATCTCTGTTACATATATAGTGCATAAGAAA

Coding sequence (CDS)

ATGGTCAAAATAGGAGAAATCGACCAGAAAGAGGAAGAACAAGAAGAAGAAGAGGAAGAAGATGAAGTTGAATGGCCGCCATGGCTGGAACCTCTGCTGAGCACGAGCTTCTTCGTTCAATGCAAGCTGCACGCGGATTCGCACAAAAGTGAATGCAATATGTATTGCTTGGATTGCGTGAACGGAGCTCTCTGTTCGCTCTGTCTTGATTCGCATCGAGATCACAGAGCCATTCAGATAAGGAGATCGTCGTACCATGATGTGATAAGAGTATGCGAGATACAGAAATATGTGGACATAACAGGAGTCCAAACTTACATCATAAATAGTGCGAGGATCGTGTTCTTGAACGAGCGCCCTCAGACACGTCCTTCGAAAGCTCTCACTAACATCTGCCTTGTTTGCCACCGTTCCCTTCTTCATTCCTTCCATTTCTGCTCTCTTGGCTGCAAGCTAATTGGGACGTCGAGAAATTTTGAGAAAAAGGAGAAAGTGATGGAAAACGAAAGCTCGGACACCGCCACGAGCAACAGAAGAAGGCTTAGAAGCAAAATCCAAAGCTTCTCGCCGGCGACGCCACCACCCACGGCGGCGGCGACTCACAAAGCTGGCAAGAGAAGGAAGGGAACGCCACATCGATCCCCAATGGGAGGACTTCTCTTAGAATTTTAA

Protein sequence

MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF

Homology

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BLAST of Carg23608 vs. NCBI nr
Match: XP_022943399.1 (uncharacterized protein LOC111448175 [Cucurbita moschata])

HSP 1 Score: 419.5 bits (1077), Expect = 7.3e-114
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 223

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BLAST of Carg23608 vs. NCBI nr
Match: XP_023512107.1 (uncharacterized protein LOC111776925 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.5 bits (1059), Expect = 8.9e-112
Identity = 218/223 (97.76%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           MVKIGEIDQ  XXXXXXXXXXXXXWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MVKIGEIDQ--XXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSH DHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHPDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 221

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BLAST of Carg23608 vs. NCBI nr
Match: XP_022986606.1 (uncharacterized protein LOC111484296 [Cucurbita maxima])

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-107
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 27  PWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSSYH 86
           PWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+NGALCSLCLDSH+DHRAIQIRRSSYH
Sbjct: 27  PWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCMNGALCSLCLDSHQDHRAIQIRRSSYH 86

Query: 87  DVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHFC 146
           DVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHFC
Sbjct: 87  DVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHFC 146

Query: 147 SLGCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKR 206
           SLGCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKR
Sbjct: 147 SLGCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKR 206

Query: 207 RKGTPHRSPMGGLLLEF 224
           RKGTPHRSPMGGLL+EF
Sbjct: 207 RKGTPHRSPMGGLLIEF 223

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BLAST of Carg23608 vs. NCBI nr
Match: XP_008459164.1 (PREDICTED: uncharacterized protein LOC103498364 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 9.9e-95
Identity = 195/230 (84.78%), Postives = 209/230 (90.87%), Query Frame = 0


Query: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEID+   XXXXXXXXXXX WPPWLEPLLST+FFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MEKIGEIDK--NXXXXXXXXXXXEWPPWLEPLLSTNFFVQCKNHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGA+CSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK+VDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGAICSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKK-EKVMENESSD-----TA 180
           Q RPSKALTNICLVCHRSLL SFHFCSLGCKLIGTS+N+ KK  KV+ENESSD     T+
Sbjct: 121 QPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNYGKKIIKVVENESSDTEKSKTS 180

Query: 181 TSNRRR-LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           +SNR R LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 SSNRGRILRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 227

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BLAST of Carg23608 vs. NCBI nr
Match: XP_004148078.1 (PREDICTED: uncharacterized protein LOC101216747 [Cucumis sativus] >KGN63424.1 hypothetical protein Csa_2G445270 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 197/230 (85.65%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEID+   XXXXXXXXXXX WPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MEKIGEIDK--NXXXXXXXXXXXEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK+VDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKK-EKVMENESSD-----TA 180
           Q RPSKALTNICLVCHRSLL SFHFCSLGCKLIGTS+N  KK  KV+ENESSD     T+
Sbjct: 121 QPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNNGKKIIKVVENESSDTEKSKTS 180

Query: 181 TSNRRR-LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
            SNR R LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 GSNRGRILRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 227

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BLAST of Carg23608 vs. TAIR10
Match: AT4G17900.1 (PLATZ transcription factor family protein)

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-71
Identity = 129/196 (65.82%), Postives = 153/196 (78.06%), Query Frame = 0


Query: 25  WPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSS 84
           WPPWL+PLL   FFV CK H DSHKSECNMYCLDC NG LCSLCL  H+DHR IQIRRSS
Sbjct: 33  WPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIRRSS 92

Query: 85  YHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLL-HSF 144
           YHDVIRV EIQKY+DI G+QTY+INSA++VFLNERPQ RP K +TN C VC+RSL+  SF
Sbjct: 93  YHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRSLVDDSF 152

Query: 145 HFCSLGCKLIGTSRNFEK--KEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATH 204
            FCSLGCK+ GTSR FEK  +  +ME E S ++ +  + + + +QSFSP+TPP T ++  
Sbjct: 153 RFCSLGCKIAGTSRGFEKGRENLLMETEDSSSSIAIGKNI-TNLQSFSPSTPPLTTSSNC 212

Query: 205 KAGKRRKGTPHRSPMG 218
           +  KRRKG PHRSPMG
Sbjct: 213 RIVKRRKGIPHRSPMG 227

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BLAST of Carg23608 vs. TAIR10
Match: AT1G32700.1 (PLATZ transcription factor family protein)

HSP 1 Score: 255.8 bits (652), Expect = 2.5e-68
Identity = 128/207 (61.84%), Postives = 155/207 (74.88%), Query Frame = 0


Query: 25  WPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSS 84
           +P WL+PLL   FFVQCKLHADSHKSECNMYCLDC NG LCSLCL  H+DH AIQIRRSS
Sbjct: 11  YPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSS 70

Query: 85  YHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFH 144
           YHDVIRV EIQK++DITGVQTY+INSA++VFLNERPQ RP K + N C VC+RSL+ SF 
Sbjct: 71  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFR 130

Query: 145 FCSLGCKLIGTSRNFEKKEKVMENESSDT----ATSNRRRLRSK----IQSFSPATPPPT 204
           FCSLGCK+ G S+   KK K   N  SD+    ++++  RL+        SF+P+T PP 
Sbjct: 131 FCSLGCKISGISK---KKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPST-PPL 190

Query: 205 AAATHKAGKRRKGTPHRSPMGGLLLEF 224
           +A   +  KRRKG PHR+P GGL++E+
Sbjct: 191 SAVNRRIAKRRKGIPHRAPFGGLIIEY 213

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BLAST of Carg23608 vs. TAIR10
Match: AT1G21000.1 (PLATZ transcription factor family protein)

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 113/233 (48.50%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 26  PPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSSY 85
           PPWL P+L  S+FV C +H DS+K+ECN++CLDC   A CS CL  H+DHR +QIRRSSY
Sbjct: 16  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSY 75

Query: 86  HDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHF 145
           H+V+RV EIQK++DI  VQTYIINSA+IVFLNERPQ R  K +TN C +C RSLL SF F
Sbjct: 76  HNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRF 135

Query: 146 CSLGCKLIGTSR-----NFEKKEK-------VMENESSDTATSNRR-----RLRSKIQ-- 205
           CSLGCKL G  R      F  K K         E++ + T T  R+     RL S +   
Sbjct: 136 CSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRLMSGLSIS 195

Query: 206 ------------------------SFSPATPPPTAAATHKAGKRRKGTPHRSP 216
                                   SFSP TPP      H+   RRKG PHR+P
Sbjct: 196 TVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP---IYNHRNSSRRKGVPHRAP 245

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BLAST of Carg23608 vs. TAIR10
Match: AT1G76590.1 (PLATZ transcription factor family protein)

HSP 1 Score: 198.0 bits (502), Expect = 6.3e-51
Identity = 111/230 (48.26%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 26  PPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSSY 85
           PPWL P+L  ++F+ C +HA S+KSECNM+CLDC + A CS CL +HR+HR +QIRRSSY
Sbjct: 18  PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRRSSY 77

Query: 86  HDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHF 145
           H+V+RV EIQKY+DI+ VQTYIINSARIVFLNERPQ R  K +TN C +C RSLL SF F
Sbjct: 78  HNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDSFRF 137

Query: 146 CSLGCKLIGTSR-----------NFEKKEKVMENESSDTATSNRR-----RLRSKIQ--- 205
           CSLGCKL G  R           +  + E   E++ + T T  R+     RL S +    
Sbjct: 138 CSLGCKLGGMKRDPSLTFSLRGKHGREYEGEWESDEATTPTKIRKTCAFNRLMSGLSIST 197

Query: 206 ---------------------SFSPATPPPTAAATHKAGKRRKGTPHRSP 216
                                  SP TPP      H+   RRKG PHR+P
Sbjct: 198 VKCDYLSGDQPSSSSGDESGFKLSPGTPP---IYNHRNSSRRKGVPHRAP 244

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BLAST of Carg23608 vs. TAIR10
Match: AT5G46710.1 (PLATZ transcription factor family protein)

HSP 1 Score: 191.8 bits (486), Expect = 4.5e-49
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 0


Query: 25  WPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSS 84
           WP WL+PLL+  FF QCK H    ++EC MYCLDC N + CSLCL  H +HR IQIR SS
Sbjct: 27  WPIWLKPLLNQHFFAQCKFHGHLPRTECKMYCLDCTNDSFCSLCLSEHENHRTIQIRISS 86

Query: 85  YHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHS-F 144
           YH+V +V EIQKY+DI+ +QTY+INS++++FLNERPQ++P K  TN C+VC+R L  + F
Sbjct: 87  YHNVTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQSKPGKGFTNACMVCYRGLAENCF 146

Query: 145 HFCSLGCKLIGTSRNFEKKEKVMENESS--------DTATSNRRRLRSKIQSFSPATPPP 204
            FCS+GCK+ GTS  F+K+ K   N+S                          SP TP  
Sbjct: 147 RFCSIGCKVAGTSGVFQKRVKHTTNDSDXXXXXXXXXXXXXXXXXXXXXXXXLSPPTPQF 206

Query: 205 TAAATHKAGKRRKGTPHRSP 216
              +  K  + RKG PHR+P
Sbjct: 207 PPRSLRK--RLRKGIPHRAP 224

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BLAST of Carg23608 vs. Swiss-Prot
Match: sp|P0CB19|Y3081_ARATH (Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-04
Identity = 36/127 (28.35%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 94  IQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNI---CLVCHRSL--LHSFHFCSL 153
           + +Y+DI+G+  Y IN   IV++N+R      ++ +N+   C +C   +    S  FCS+
Sbjct: 1   MSQYMDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSM 60

Query: 154 GCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRK 213
            CK    S    + +++MEN              S++   S     P     H    RRK
Sbjct: 61  ECKF--RSVLGSQLDELMENS-------------SEVTEISEEIDEPVMKKRH----RRK 108

Query: 214 GTPHRSP 216
           G+PHR+P
Sbjct: 121 GSPHRAP 108

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BLAST of Carg23608 vs. TrEMBL
Match: tr|A0A1S3C9J0|A0A1S3C9J0_CUCME (uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 6.5e-95
Identity = 195/230 (84.78%), Postives = 209/230 (90.87%), Query Frame = 0


Query: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEID+   XXXXXXXXXXX WPPWLEPLLST+FFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MEKIGEIDK--NXXXXXXXXXXXEWPPWLEPLLSTNFFVQCKNHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGA+CSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK+VDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGAICSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKK-EKVMENESSD-----TA 180
           Q RPSKALTNICLVCHRSLL SFHFCSLGCKLIGTS+N+ KK  KV+ENESSD     T+
Sbjct: 121 QPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNYGKKIIKVVENESSDTEKSKTS 180

Query: 181 TSNRRR-LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           +SNR R LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 SSNRGRILRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 227

[Close]

BLAST of Carg23608 vs. TrEMBL
Match: tr|A0A0A0LR17|A0A0A0LR17_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.9e-94
Identity = 197/230 (85.65%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MVKIGEIDQXXXXXXXXXXXXXXXWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEID+   XXXXXXXXXXX WPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MEKIGEIDK--NXXXXXXXXXXXEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK+VDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKK-EKVMENESSD-----TA 180
           Q RPSKALTNICLVCHRSLL SFHFCSLGCKLIGTS+N  KK  KV+ENESSD     T+
Sbjct: 121 QPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNNGKKIIKVVENESSDTEKSKTS 180

Query: 181 TSNRRR-LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
            SNR R LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 GSNRGRILRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 227

[Close]

BLAST of Carg23608 vs. TrEMBL
Match: tr|A0A2I4H095|A0A2I4H095_9ROSI (uncharacterized protein LOC109012416 OS=Juglans regia OX=51240 GN=LOC109012416 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 7.0e-81
Identity = 149/204 (73.04%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 25  WPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSS 84
           WPPWL+PLL TSFFV CK+HADSHKSECNMYCLDC+NGALCSLCL SHRDHRAIQIRRSS
Sbjct: 97  WPPWLQPLLQTSFFVHCKIHADSHKSECNMYCLDCMNGALCSLCLTSHRDHRAIQIRRSS 156

Query: 85  YHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFH 144
           YHDVIRV EIQKY+DITGVQTYIINSARIVFLNERPQ RP K +TN C VC RSLL SF 
Sbjct: 157 YHDVIRVSEIQKYLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQVCERSLLDSFS 216

Query: 145 FCSLGCKLIGTSRNFEKKEKVMEN-ESSDTATS----NRRRLRSKIQSFSPATPPPTAAA 204
           FCSLGCK++GTS++F KK+  ME+ E SDT  S        ++SK++SF+P+TPPPT AA
Sbjct: 217 FCSLGCKIVGTSKSFRKKKMCMESTEGSDTEGSLNGIGNGHMKSKVRSFTPSTPPPT-AA 276

Query: 205 THKAGKRRKGTPHRSPMGGLLLEF 224
           +++   RRKG PHRSPMGGL++E+
Sbjct: 277 SYRTANRRKGVPHRSPMGGLIIEY 299

[Close]

BLAST of Carg23608 vs. TrEMBL
Match: tr|A0A2P4KCU0|A0A2P4KCU0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26501 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 7.0e-81
Identity = 149/203 (73.40%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 25  WPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSS 84
           WP WL PLL TSFFVQCK+HADSHKSECNMYCLDC+NGALCSLCL SHRDHRAIQIRRSS
Sbjct: 16  WPLWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSLCLGSHRDHRAIQIRRSS 75

Query: 85  YHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFH 144
           YHDVIRV EIQKY+DITGVQTYIINSARIVFLNERPQ RP K +TN C VC RSLL SF 
Sbjct: 76  YHDVIRVSEIQKYLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCQVCERSLLDSFS 135

Query: 145 FCSLGCKLIGTSRNFEKKEKVMENESSDTATS----NRRRLRSKIQSFSPATPPPTAAAT 204
           FCSLGCK++GTS+NF K++  ME + SDT  S    +   ++S+IQSFSP+TPPPT    
Sbjct: 136 FCSLGCKIVGTSKNFRKRKMCMETDGSDTEGSLNGISNGYVKSRIQSFSPSTPPPT--VN 195

Query: 205 HKAGKRRKGTPHRSPMGGLLLEF 224
           ++  KRRKG PHRSPMGGL++E+
Sbjct: 196 YRTAKRRKGVPHRSPMGGLIIEY 216

[Close]

BLAST of Carg23608 vs. TrEMBL
Match: tr|B9IPK7|B9IPK7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G051200v3 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 146/203 (71.92%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 25  WPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSS 84
           WPPWL PLL TSFFVQCKLHAD+HKSECNMYCLDC+NGALCS+CL  H DHRAIQIRRSS
Sbjct: 39  WPPWLHPLLETSFFVQCKLHADAHKSECNMYCLDCMNGALCSVCLSLHSDHRAIQIRRSS 98

Query: 85  YHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFH 144
           YHDVIRV EIQKY+DITGVQTYIINSARIVFLNERPQ RP K +TN C VC RSLL SF 
Sbjct: 99  YHDVIRVSEIQKYLDITGVQTYIINSARIVFLNERPQPRPGKGVTNTCHVCERSLLDSFS 158

Query: 145 FCSLGCKLIGTSRNFEKKEKVMENESSDTATS----NRRRLRSKIQSFSPATPPPTAAAT 204
           FCSLGCK++GTS+NF KK++  E + SDT  S         RSK+QSF+P+TPPP+A   
Sbjct: 159 FCSLGCKIVGTSKNFRKKKRYKEMDGSDTDESMKGIGNGGARSKVQSFTPSTPPPSAMNN 218

Query: 205 HKAGKRRKGTPHRSPMGGLLLEF 224
           ++  KRRKG PHRSPMGG ++E+
Sbjct: 219 YRTAKRRKGVPHRSPMGGYIIEY 241

The following BLAST results are available for this feature:

BLAST of Carg23608 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943399.1	7.3e-114	99.10	uncharacterized protein LOC111448175 [Cucurbita moschata]	[more]
XP_023512107.1	8.9e-112	97.76	uncharacterized protein LOC111776925 [Cucurbita pepo subsp. pepo]	[more]
XP_022986606.1	1.3e-107	97.97	uncharacterized protein LOC111484296 [Cucurbita maxima]	[more]
XP_008459164.1	9.9e-95	84.78	PREDICTED: uncharacterized protein LOC103498364 [Cucumis melo]	[more]
XP_004148078.1	2.9e-94	85.65	PREDICTED: uncharacterized protein LOC101216747 [Cucumis sativus] >KGN63424.1 hy...	[more]

BLAST of Carg23608 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17900.1	1.9e-71	65.82	PLATZ transcription factor family protein	[more]
AT1G32700.1	2.5e-68	61.84	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.3e-51	48.50	PLATZ transcription factor family protein	[more]
AT1G76590.1	6.3e-51	48.26	PLATZ transcription factor family protein	[more]
AT5G46710.1	4.5e-49	48.00	PLATZ transcription factor family protein	[more]

BLAST of Carg23608 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CB19\|Y3081_ARATH	7.2e-04	28.35	Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 P...	[more]

BLAST of Carg23608 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9J0\|A0A1S3C9J0_CUCME	6.5e-95	84.78	uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=...	[more]
tr\|A0A0A0LR17\|A0A0A0LR17_CUCSA	1.9e-94	85.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1	[more]
tr\|A0A2I4H095\|A0A2I4H095_9ROSI	7.0e-81	73.04	uncharacterized protein LOC109012416 OS=Juglans regia OX=51240 GN=LOC109012416 P...	[more]
tr\|A0A2P4KCU0\|A0A2P4KCU0_QUESU	7.0e-81	73.40	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26501 PE=4 SV=1	[more]
tr\|B9IPK7\|B9IPK7_POPTR	1.6e-80	71.92	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G051200v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23608-RA	Carg23608-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 81..152 e-value: 2.4E-26 score: 92.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..223
None	No IPR available	PANTHER	PTHR31065:SF8	SUBFAMILY NOT NAMED	coord: 16..221
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 16..221

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23608	Cla010241	Watermelon (97103) v1	carwmB0794
Carg23608	Csa2G445270	Cucumber (Chinese Long) v2	carcuB0813
Carg23608	MELO3C021855	Melon (DHL92) v3.5.1	carmeB0793
Carg23608	ClCG09G017220	Watermelon (Charleston Gray)	carwcgB0769
Carg23608	CSPI02G27960	Wild cucumber (PI 183967)	carcpiB0832
Carg23608	Cucsa.318510	Cucumber (Gy14) v1	carcgyB0908
Carg23608	CmaCh02G004490	Cucurbita maxima (Rimu)	carcmaB1105
Carg23608	CmaCh20G009000	Cucurbita maxima (Rimu)	carcmaB1104
Carg23608	CmoCh02G004580	Cucurbita moschata (Rifu)	carcmoB1074
Carg23608	CmoCh20G009080	Cucurbita moschata (Rifu)	carcmoB1073
Carg23608	Lsi10G002850	Bottle gourd (USVL1VR-Ls)	carlsiB731
Carg23608	Cp4.1LG16g01960	Cucurbita pepo (Zucchini)	carcpeB1113
Carg23608	Cp4.1LG05g12130	Cucurbita pepo (Zucchini)	carcpeB1114
Carg23608	CsGy2G027410	Cucumber (Gy14) v2	carcgybB0787
Carg23608	MELO3C021855.2	Melon (DHL92) v3.6.1	carmedB0805
Carg23608	CsaV3_2G036660	Cucumber (Chinese Long) v3	carcucB0836
Carg23608	Cla97C09G178750	Watermelon (97103) v2	carwmbB0833
Carg23608	Bhi10G001743	Wax gourd	carwgoB0930

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23608	Carg24052	Silver-seed gourd	carcarB620

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23608	Melon (DHL92) v3.5.1	carmeB0794