BLAST of Lsi10G002070 vs. Swiss-Prot
Match:
SIGA_ARATH (RNA polymerase sigma factor sigA OS=Arabidopsis thaliana GN=SIGA PE=1 SV=1)
HSP 1 Score: 663.7 bits (1711), Expect = 1.6e-189
Identity = 358/517 (69.25%), Postives = 424/517 (82.01%), Query Frame = 1
Query: 2 MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSP 61
MATAA+IGL KRLL+SS Y+SD TEK L N+ Q ++ TK+ + AK +SN+SP
Sbjct: 1 MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCS-SQYHIASTKSGITAKKASNYSP 60
Query: 62 SYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE------DEETDLKCTVEALLLL 121
S+PSSNR++Q KA+KE VD S T +PWL N T E D++ + +VEA+LLL
Sbjct: 61 SFPSSNRHTQSAKALKESVDVAS--TEKPWLPNGTDKELEEECYDDDDLISHSVEAILLL 120
Query: 122 QKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFM 181
QKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K HV
Sbjct: 121 QKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHV-- 180
Query: 182 AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRL 241
+S +++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RL
Sbjct: 181 ----------KAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRL 240
Query: 242 KERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM 301
K+RLGCEPS++QLA+SLKISR EL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Sbjct: 241 KDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEM 300
Query: 302 ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG 361
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLG
Sbjct: 301 SDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLG 360
Query: 362 LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGET 421
LIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGET
Sbjct: 361 LIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGET 420
Query: 422 HHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEIS 481
HHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+IS
Sbjct: 421 HHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDIS 480
Query: 482 KRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
KRIGLSRERVRQVGLVALEKLK AA+ RKMEAM+LK+
Sbjct: 481 KRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
BLAST of Lsi10G002070 vs. Swiss-Prot
Match:
SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigA PE=3 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 4.8e-40
Identity = 113/330 (34.24%), Postives = 185/330 (56.06%), Query Frame = 1
Query: 176 KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLK 235
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL
Sbjct: 62 KAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLS 121
Query: 236 ERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA 295
E+L +P + + A ++++ R R+ A++K+ SN+RLV+SIA++Y N G
Sbjct: 122 EKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQ 181
Query: 296 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL 355
DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E +
Sbjct: 182 DLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISR 241
Query: 356 I-RNAKVRLQEKGITPSLDRIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL 415
I + K+ QE G P+ + IA + M+ +K+ K+A IS + +E L
Sbjct: 242 IKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF 301
Query: 416 ---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E 475
GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Sbjct: 302 IESDGETPEDQVSKN-------------LLREDLEKVLD-SLSPRERDVLRLRYGLDDGR 361
Query: 476 CLTWEEISKRIGLSRERVRQVGLVALEKLK 495
T EEI + ++RER+RQ+ AL KL+
Sbjct: 362 MKTLEEIGQIFNVTRERIRQIEAKALRKLR 377
BLAST of Lsi10G002070 vs. Swiss-Prot
Match:
SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA1 PE=3 SV=2)
HSP 1 Score: 166.4 bits (420), Expect = 8.2e-40
Identity = 114/331 (34.44%), Postives = 183/331 (55.29%), Query Frame = 1
Query: 173 AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRL 232
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L
Sbjct: 74 AAAKAKAKVRKTYT----EDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDEL 133
Query: 233 KERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM 292
E+L PS+ + A ++ E R R+ A++K+ SN+RLV+SIA++Y N G
Sbjct: 134 LEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSF 193
Query: 293 ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG 352
DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E +
Sbjct: 194 QDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETIS 253
Query: 353 LI-RNAKVRLQEKGITPSLDRIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNG 412
I + K+ QE G P+ + IA + M+ +K+ K+A IS + +E L
Sbjct: 254 RIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGD 313
Query: 413 L---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN- 472
GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Sbjct: 314 FIEADGETPEDEVAKN-------------LLREDLEGVLS-TLSPRERDVLRLRYGLDDG 373
Query: 473 ECLTWEEISKRIGLSRERVRQVGLVALEKLK 495
T EEI + ++RER+RQ+ AL KL+
Sbjct: 374 RMKTLEEIGQLFNVTRERIRQIEAKALRKLR 386
BLAST of Lsi10G002070 vs. Swiss-Prot
Match:
RPSB_NOSS1 (RNA polymerase sigma-B factor OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigB PE=3 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 97/293 (33.11%), Postives = 172/293 (58.70%), Query Frame = 1
Query: 206 LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSL 265
LLSH + + +++++ + + K L E+L EP+ + A +++ L ++ + +
Sbjct: 37 LLSHEQEIFFAQQVQQMMVMFTAKEELAEKLQREPTLQEWADKMQLKEDVLLQQLSQGQI 96
Query: 266 AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 325
A++K+ +N+RLV+SIA++Y E DL+Q G +GL RG+EKFD + G+K STY YWW
Sbjct: 97 AKQKMIQANLRLVVSIAKKYQKRNLEFLDLIQEGALGLERGVEKFDPTLGYKFSTYAYWW 156
Query: 326 IRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKV 385
IRQG++RA+ + SRT+RLP H+ ++L I+ + L +K G + IA++LN+ ++
Sbjct: 157 IRQGITRAIAQQSRTIRLPIHMADKLNKIKCVQRELSQKLGYIAGVTEIAQALNLEPSQI 216
Query: 386 KNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNKLI 445
+ + + + SLD G +T + D+ + +P + +L +++ L+
Sbjct: 217 REYLQLVRQPVSLDMRI-----GFEQDTQLQDLLKDDGM--SPERYAERELLYQDIHNLL 276
Query: 446 NMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK 496
L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Sbjct: 277 -AKLTPQQKEVLILRFGLAGGCELTLVQISQRMGISRERVRQVEKQALTLLRR 321
BLAST of Lsi10G002070 vs. Swiss-Prot
Match:
SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2)
HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 125/375 (33.33%), Postives = 197/375 (52.53%), Query Frame = 1
Query: 140 KTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK 199
KT +P +G S +++R+ ++ N + + LR T S
Sbjct: 230 KTASGIPSVKTGSSPKKKRLVAQEVDHNDPL--------RYLRMTTS------------- 289
Query: 200 GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSR 259
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R
Sbjct: 290 ---SSKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQR 349
Query: 260 VMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKIS 319
+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK S
Sbjct: 350 IHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFS 409
Query: 320 TYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLN 379
TY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+
Sbjct: 410 TYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATG 469
Query: 380 MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL--- 439
+S K++ + SLD++ + N P E IAD P T IL
Sbjct: 470 LSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV----IAD------PEAVTSEDILIKE 529
Query: 440 --KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEK 499
+ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A K
Sbjct: 530 FMRQDLDKVLD-SLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRK 569
Query: 500 LKKAAKTRKMEAMLL 508
LK + ++ L+
Sbjct: 590 LKNKKRNNHLQQYLV 569
BLAST of Lsi10G002070 vs. TrEMBL
Match:
A0A0A0LQR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431090 PE=4 SV=1)
HSP 1 Score: 914.4 bits (2362), Expect = 5.9e-263
Identity = 481/510 (94.31%), Postives = 495/510 (97.06%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN D RLGQTQVS +K+VVIAKSS+NFS
Sbjct: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSSSKSVVIAKSSANFS 60
Query: 61 PSYPSSNRNSQ-CIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSM 120
P YPSSNR+SQ CIKAVKEHV+TPSSP AEPW HNTT WEDEET+LK TVEALLLLQKSM
Sbjct: 61 PRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWEDEETELKYTVEALLLLQKSM 120
Query: 121 LEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISK 180
LEKQW+LSFEQTVSTD P+ KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISK
Sbjct: 121 LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180
Query: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 240
Query: 241 PSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
PSEDQLAISLKISR ELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
Query: 361 RLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
Query: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
NCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
Query: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508
BLAST of Lsi10G002070 vs. TrEMBL
Match:
A0A067E9X0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010521mg PE=4 SV=1)
HSP 1 Score: 754.2 bits (1946), Expect = 1.0e-214
Identity = 396/509 (77.80%), Postives = 445/509 (87.43%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAA+IGL A KRLL+SS YYSD +EK Y N DL +QV TKNVV AK SSN++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYIN-DLGSANSQVGSTKNVVAAKKSSNYN 60
Query: 61 PSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 120
PS+PSSNR +Q IKA+KEHVDT + TAEPW E+E ++L +VEALLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 121 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 180
EKQWNLSFE+TV TD+P KT KKVPVTCSGVSARQRR++SK+KI +++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQ 180
Query: 181 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240
LR ISPEL+QNRLKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 241 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
S +QLA SL+ISR EL+S +MECSLAREKL MSNVRLVMSIAQRYDNMGA+MADLVQGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 300
Query: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 360
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 361 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
L+EKG+TPS+DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 421 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480
+ENNPWHG D W LK EVNKLI +TLG+REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 481 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of Lsi10G002070 vs. TrEMBL
Match:
V4SS73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031289mg PE=4 SV=1)
HSP 1 Score: 750.7 bits (1937), Expect = 1.1e-213
Identity = 393/509 (77.21%), Postives = 444/509 (87.23%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAA+IGL A KRLL+SS YYSD +EK Y N DL +QV TKNVV AK SSN++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYIN-DLGSANSQVGSTKNVVAAKKSSNYN 60
Query: 61 PSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 120
PS+PSSNR +Q IKA+KEHVDT + TAEPW E+E ++L +VEALLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 121 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 180
EKQWNLSFE+TV TD+P KT KKVPVTCSGVSARQRR++SK+KI +++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQ 180
Query: 181 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240
LR ISPEL+QN LKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 241 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
S +QLA SL+ISR EL+S +MECSLAREKL MSNVRLVMSIAQRYDNMGA+MADL+QGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 300
Query: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 360
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 361 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
L+EKG+TP++DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 421 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480
+ENNPWHG D W LK EVNKLI +TLG+REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 481 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of Lsi10G002070 vs. TrEMBL
Match:
A0A0G2SY45_9ROSI (Sigma factor OS=Melianthus villosus GN=sig1 PE=2 SV=1)
HSP 1 Score: 743.0 bits (1917), Expect = 2.4e-211
Identity = 385/509 (75.64%), Postives = 439/509 (86.25%), Query Frame = 1
Query: 2 MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSP 61
MATAA+IGL A KRLL+SS YYSD+ EK+ YAN+ G +PTK VVIAK SSN SP
Sbjct: 1 MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDH---GHYNATPTKTVVIAKKSSNCSP 60
Query: 62 SYPSSNRNSQCIKAVKEHVDTPSSP-TAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 121
+PSSNR +Q IKA+KEHVD S P TAE W + +++ D++ +VEALLLLQKSML
Sbjct: 61 RFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSML 120
Query: 122 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 181
EKQWNLSF++T+ TD + KT K++PVTCSGVSARQRRMS+KRKI +++ M Q +
Sbjct: 121 EKQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSMMQTSRCNR 180
Query: 182 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
LR I PEL+QNR KGYVKG++SEELLSHAEVV LSKKIK GL+LEE K RLK+RLGCEP
Sbjct: 181 LRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEP 240
Query: 242 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 301
S++QLA SL+ISR ELRS+ +E LAREKLAMSNVRLVMSIAQRYDNMGAEM+DLVQGGL
Sbjct: 241 SDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL 300
Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 361
IGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSRTLRLPTHLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKIR 360
Query: 362 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
L+EKGITPS++R+AE LNMSKKK++NATEAISKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 422 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
CL+NNPWHG D W LK EV KLI MTLG+REREIIRLYHGLDNECLTWE+ISKRIGLSRE
Sbjct: 421 CLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRE 480
Query: 482 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVA+EKLK AA+ + MEAML+KH
Sbjct: 481 RVRQVGLVAMEKLKHAARRKHMEAMLVKH 506
BLAST of Lsi10G002070 vs. TrEMBL
Match:
B9SDF8_RICCO (RNA polymerase sigma factor rpoD, putative OS=Ricinus communis GN=RCOM_1517450 PE=4 SV=1)
HSP 1 Score: 738.4 bits (1905), Expect = 5.8e-210
Identity = 383/509 (75.25%), Postives = 444/509 (87.23%), Query Frame = 1
Query: 2 MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSP 61
MATAA+IGL A KRLL+S+ YYSD TEK+ AN L Q++ TK +++AK SSN+ P
Sbjct: 1 MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEH-GLTHYQITSTKTLIVAKKSSNYGP 60
Query: 62 SYPSSNRNSQCIKAVKEHVDTPSSP-TAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 121
S+PSSNRN+Q IKA+KEHVDT S+P TA E+E +DL +VEALLLLQKSML
Sbjct: 61 SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 120
Query: 122 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 181
EKQWNLSFE+T S+D+P K+ KK+PVTCSGVSARQRR++ +RK ++ F Q + KQ
Sbjct: 121 EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 180
Query: 182 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
L+ +SPELLQNRLKGYVKG++SEELLSHAEVVRLS+ IK GL+LE+ K+RLKERLGC+P
Sbjct: 181 LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 240
Query: 242 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 301
S++Q+A SLKISR EL+S+ + CSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Sbjct: 241 SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 361
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 360
Query: 362 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
L+EKG+TPS+DRIAESLN+S+KKV+NATEA+SKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 422 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
CLENNPWHG D W LK EVNKLIN+TL +RE+EIIRLY+GLDNE LTWE+ISKRIGLSRE
Sbjct: 421 CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 480
Query: 482 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVALEKLK AA+ +K+EAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKLEAMLVKH 508
BLAST of Lsi10G002070 vs. TAIR10
Match:
AT1G64860.1 (AT1G64860.1 sigma factor A)
HSP 1 Score: 663.7 bits (1711), Expect = 9.2e-191
Identity = 358/517 (69.25%), Postives = 424/517 (82.01%), Query Frame = 1
Query: 2 MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFSP 61
MATAA+IGL KRLL+SS Y+SD TEK L N+ Q ++ TK+ + AK +SN+SP
Sbjct: 1 MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCS-SQYHIASTKSGITAKKASNYSP 60
Query: 62 SYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWE------DEETDLKCTVEALLLL 121
S+PSSNR++Q KA+KE VD S T +PWL N T E D++ + +VEA+LLL
Sbjct: 61 SFPSSNRHTQSAKALKESVDVAS--TEKPWLPNGTDKELEEECYDDDDLISHSVEAILLL 120
Query: 122 QKSMLEKQWNLSFEQTVSTDAPRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQNKHVFM 181
QKSMLEK WNLSFE+ VS++ P T+ KK+PV TCSG+SARQRR+ +K+K HV
Sbjct: 121 QKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHV-- 180
Query: 182 AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRL 241
+S +++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RL
Sbjct: 181 ----------KAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRL 240
Query: 242 KERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM 301
K+RLGCEPS++QLA+SLKISR EL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Sbjct: 241 KDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEM 300
Query: 302 ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG 361
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLG
Sbjct: 301 SDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLG 360
Query: 362 LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGET 421
LIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGET
Sbjct: 361 LIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGET 420
Query: 422 HHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEIS 481
HHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+IS
Sbjct: 421 HHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDIS 480
Query: 482 KRIGLSRERVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
KRIGLSRERVRQVGLVALEKLK AA+ RKMEAM+LK+
Sbjct: 481 KRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
BLAST of Lsi10G002070 vs. TAIR10
Match:
AT1G08540.1 (AT1G08540.1 RNApolymerase sigma subunit 2)
HSP 1 Score: 162.5 bits (410), Expect = 6.7e-40
Identity = 125/375 (33.33%), Postives = 197/375 (52.53%), Query Frame = 1
Query: 140 KTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVK 199
KT +P +G S +++R+ ++ N + + LR T S
Sbjct: 230 KTASGIPSVKTGSSPKKKRLVAQEVDHNDPL--------RYLRMTTS------------- 289
Query: 200 GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSR 259
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R
Sbjct: 290 ---SSKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQR 349
Query: 260 VMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKIS 319
+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK S
Sbjct: 350 IHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFS 409
Query: 320 TYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLN 379
TY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+
Sbjct: 410 TYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATG 469
Query: 380 MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL--- 439
+S K++ + SLD++ + N P E IAD P T IL
Sbjct: 470 LSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV----IAD------PEAVTSEDILIKE 529
Query: 440 --KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEK 499
+ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A K
Sbjct: 530 FMRQDLDKVLD-SLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRK 569
Query: 500 LKKAAKTRKMEAMLL 508
LK + ++ L+
Sbjct: 590 LKNKKRNNHLQQYLV 569
BLAST of Lsi10G002070 vs. TAIR10
Match:
AT2G36990.1 (AT2G36990.1 RNApolymerase sigma-subunit F)
HSP 1 Score: 151.8 bits (382), Expect = 1.2e-36
Identity = 102/313 (32.59%), Postives = 173/313 (55.27%), Query Frame = 1
Query: 194 LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR 253
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS
Sbjct: 235 LQLFLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISS 294
Query: 254 VELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSS 313
L+S + +REKL +N+RLV+ IA++Y N G DL+Q G +GL++ +EKF
Sbjct: 295 PVLKSDIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQ 354
Query: 314 KGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDR 373
G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS +
Sbjct: 355 SGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEE 414
Query: 374 IAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDT 433
+A + +S +K+ S+ + + + T D+ +E P
Sbjct: 415 LAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQD----TTFQEITPDSGIE-TPTMSVGK 474
Query: 434 WILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE 493
+++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Sbjct: 475 QLMRNHVRNLLNV-LSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALY 534
Query: 494 KLKKAAKTRKMEA 505
+LK+ + + A
Sbjct: 535 RLKQNMNSHGLHA 541
BLAST of Lsi10G002070 vs. TAIR10
Match:
AT5G13730.1 (AT5G13730.1 sigma factor 4)
HSP 1 Score: 143.3 bits (360), Expect = 4.2e-34
Identity = 112/341 (32.84%), Postives = 166/341 (48.68%), Query Frame = 1
Query: 160 SSKRKIQNKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKI 219
S KR+ + + + ++ + E + V G LS E V+L +
Sbjct: 76 SEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVVGASRSGFLSRLEEVQLCLYL 135
Query: 220 KVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSL----AREKLAMSNV 279
K G LE T ++E + +++ L R + + E AREK+
Sbjct: 136 KEGAKLENLGTSVEEN-------EMVSVLLASGRGKKKRSANEILCRRKEAREKITRCYR 195
Query: 280 RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV 339
RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+
Sbjct: 196 RLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIA 255
Query: 340 ENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKV 399
SR ++LP + E + A L K PS + IAE LN++ V+ A E
Sbjct: 256 HKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSP 315
Query: 400 FSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI 459
SLDR A + G I E P +K E+ +L+ +L RE +
Sbjct: 316 VSLDRVASQN-----GRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLG-SLTARESRV 375
Query: 460 IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK 495
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Sbjct: 376 LGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLR 403
BLAST of Lsi10G002070 vs. TAIR10
Match:
AT3G53920.1 (AT3G53920.1 RNApolymerase sigma-subunit C)
HSP 1 Score: 99.0 bits (245), Expect = 9.0e-21
Identity = 76/283 (26.86%), Postives = 146/283 (51.59%), Query Frame = 1
Query: 215 LSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRVELRSRVMECSLAREKLAMSN 274
+S +K+ +E +T+L+E G S A + ++ L + R++L S
Sbjct: 281 MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKST 340
Query: 275 VRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 334
LV+ +A+ Y +G DL+Q G +G+L+G E+FD ++G+K STYV +WIR+ +S +
Sbjct: 341 RSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMV 400
Query: 335 VENSRTLRLPTHLHERLGLIRNAKVRLQ-EKGITPSLD-RIAESLNMSKKKVKNATEAIS 394
++R + +P+ + + I+ A+ L+ GI + D IA+ S KK++ A + +
Sbjct: 401 SRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLK 460
Query: 395 KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDRER 454
V S+D++ + D +E +P + +++ L+ L RE+
Sbjct: 461 VVGSIDKKVGDCFT----TKFLEFTPDTTME-SPEEAVMRQSARRDIHDLLE-GLEPREK 520
Query: 455 EIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLK 495
+++ L +GL D + EEI K + +S+E +R++ A+ KL+
Sbjct: 521 QVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLR 557
BLAST of Lsi10G002070 vs. NCBI nr
Match:
gi|659125683|ref|XP_008462812.1| (PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo])
HSP 1 Score: 941.0 bits (2431), Expect = 8.5e-271
Identity = 492/510 (96.47%), Postives = 500/510 (98.04%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAN D RLGQTQVSPTK+VVIAKSS+NFS
Sbjct: 1 MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSPTKSVVIAKSSANFS 60
Query: 61 PSYPSSNRNSQ-CIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSM 120
PSYP SNR+SQ CIKAVKEHV+TPSSPTAEPWL NTTIWEDEETDLKCTVEALLLLQKSM
Sbjct: 61 PSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSM 120
Query: 121 LEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISK 180
LEKQWNLSFEQTVSTD PR KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISK
Sbjct: 121 LEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180
Query: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCE 240
Query: 241 PSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
PSEDQLAISLKISR ELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
Query: 361 RLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
Query: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
Query: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
ERVRQVGLVALEKLKKAAKTRKMEAML+KH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLIKH 509
BLAST of Lsi10G002070 vs. NCBI nr
Match:
gi|449468291|ref|XP_004151855.1| (PREDICTED: RNA polymerase sigma factor sigA [Cucumis sativus])
HSP 1 Score: 914.4 bits (2362), Expect = 8.5e-263
Identity = 481/510 (94.31%), Postives = 495/510 (97.06%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN D RLGQTQVS +K+VVIAKSS+NFS
Sbjct: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSSSKSVVIAKSSANFS 60
Query: 61 PSYPSSNRNSQ-CIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSM 120
P YPSSNR+SQ CIKAVKEHV+TPSSP AEPW HNTT WEDEET+LK TVEALLLLQKSM
Sbjct: 61 PRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWEDEETELKYTVEALLLLQKSM 120
Query: 121 LEKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISK 180
LEKQW+LSFEQTVSTD P+ KTLKKVPVTCSGVSARQRRMSSKRKIQ+KHVFMAQPKISK
Sbjct: 121 LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180
Query: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 240
Query: 241 PSEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
PSEDQLAISLKISR ELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
Query: 361 RLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
Query: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
NCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
Query: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
ERVRQVGLVALEKLKKAAKTRKMEAMLLKH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508
BLAST of Lsi10G002070 vs. NCBI nr
Match:
gi|641828896|gb|KDO48032.1| (hypothetical protein CISIN_1g010521mg [Citrus sinensis])
HSP 1 Score: 754.2 bits (1946), Expect = 1.5e-214
Identity = 396/509 (77.80%), Postives = 445/509 (87.43%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAA+IGL A KRLL+SS YYSD +EK Y N DL +QV TKNVV AK SSN++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYIN-DLGSANSQVGSTKNVVAAKKSSNYN 60
Query: 61 PSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 120
PS+PSSNR +Q IKA+KEHVDT + TAEPW E+E ++L +VEALLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 121 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 180
EKQWNLSFE+TV TD+P KT KKVPVTCSGVSARQRR++SK+KI +++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQ 180
Query: 181 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240
LR ISPEL+QNRLKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 241 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
S +QLA SL+ISR EL+S +MECSLAREKL MSNVRLVMSIAQRYDNMGA+MADLVQGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 300
Query: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 360
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 361 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
L+EKG+TPS+DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 421 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480
+ENNPWHG D W LK EVNKLI +TLG+REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 481 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of Lsi10G002070 vs. NCBI nr
Match:
gi|568862454|ref|XP_006484698.1| (PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis])
HSP 1 Score: 752.3 bits (1941), Expect = 5.6e-214
Identity = 395/509 (77.60%), Postives = 444/509 (87.23%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAA+IGL A KRLL+SS YYSD +EK Y N DL +QV TKNVV AK SSN++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYIN-DLGSANSQVGSTKNVVAAKKSSNYN 60
Query: 61 PSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 120
PS+PSSNR +Q IKA+KEHVDT + TAEPW E+E ++L +VEALLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 121 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 180
EKQWNLSFE+TV TD+P KT KKVPVTCSGVSARQRR++SK+KI +++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQ 180
Query: 181 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240
LR ISPEL+QN LKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 241 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
S +QLA SL+ISR EL+S +MECSLAREKL MSNVRLVMSIAQRYDNMGA+MADLVQGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 300
Query: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 360
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 361 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
L+EKG+TPS+DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 421 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480
+ENNPWHG D W LK EVNKLI +TLG+REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 481 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of Lsi10G002070 vs. NCBI nr
Match:
gi|567889765|ref|XP_006437403.1| (hypothetical protein CICLE_v10031289mg [Citrus clementina])
HSP 1 Score: 750.7 bits (1937), Expect = 1.6e-213
Identity = 393/509 (77.21%), Postives = 444/509 (87.23%), Query Frame = 1
Query: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANNDLRLGQTQVSPTKNVVIAKSSSNFS 60
MMATAA+IGL A KRLL+SS YYSD +EK Y N DL +QV TKNVV AK SSN++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYIN-DLGSANSQVGSTKNVVAAKKSSNYN 60
Query: 61 PSYPSSNRNSQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSML 120
PS+PSSNR +Q IKA+KEHVDT + TAEPW E+E ++L +VEALLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 121 EKQWNLSFEQTVSTDAPRGKTLKKVPVTCSGVSARQRRMSSKRKIQNKHVFMAQPKISKQ 180
EKQWNLSFE+TV TD+P KT KKVPVTCSGVSARQRR++SK+KI +++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQ 180
Query: 181 LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240
LR ISPEL+QN LKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 241 SEDQLAISLKISRVELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300
S +QLA SL+ISR EL+S +MECSLAREKL MSNVRLVMSIAQRYDNMGA+MADL+QGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 300
Query: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 360
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 361 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420
L+EKG+TP++DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 421 CLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480
+ENNPWHG D W LK EVNKLI +TLG+REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 481 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 510
RVRQVGLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| SIGA_ARATH | 1.6e-189 | 69.25 | RNA polymerase sigma factor sigA OS=Arabidopsis thaliana GN=SIGA PE=1 SV=1 | [more] |
| SIGA_NOSS1 | 4.8e-40 | 34.24 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=... | [more] |
| SIGA1_SYNE7 | 8.2e-40 | 34.44 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) G... | [more] |
| RPSB_NOSS1 | 1.2e-38 | 33.11 | RNA polymerase sigma-B factor OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sig... | [more] |
| SIGB_ARATH | 1.2e-38 | 33.33 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LQR2_CUCSA | 5.9e-263 | 94.31 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431090 PE=4 SV=1 | [more] |
| A0A067E9X0_CITSI | 1.0e-214 | 77.80 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010521mg PE=4 SV=1 | [more] |
| V4SS73_9ROSI | 1.1e-213 | 77.21 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031289mg PE=4 SV=1 | [more] |
| A0A0G2SY45_9ROSI | 2.4e-211 | 75.64 | Sigma factor OS=Melianthus villosus GN=sig1 PE=2 SV=1 | [more] |
| B9SDF8_RICCO | 5.8e-210 | 75.25 | RNA polymerase sigma factor rpoD, putative OS=Ricinus communis GN=RCOM_1517450 P... | [more] |
