BLAST of CmaCh20G009500 vs. Swiss-Prot
Match:
SIGA_ARATH (RNA polymerase sigma factor sigA OS=Arabidopsis thaliana GN=SIGA PE=1 SV=1)
HSP 1 Score: 628.6 bits (1620), Expect = 5.8e-179
Identity = 343/513 (66.86%), Postives = 405/513 (78.95%), Query Frame = 1
Query: 5 TTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFSPRN 64
T A+ GL KRLL+SS Y+SD TEK L NDH Q ++ TKS ITA+ + N+SP
Sbjct: 3 TAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSG-ITAKKASNYSPSF 62
Query: 65 QSSNRHVHCIKAAPSS----PTAEPGLHNSTIWE------DEETDLKCTVEVLLLLQKSM 124
SSNRH KA S T +P L N T E D++ + +VE +LLLQKSM
Sbjct: 63 PSSNRHTQSAKALKESVDVASTEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQKSM 122
Query: 125 LEKQWNLSFDQTVLADAPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHVLMAQPR 184
LEK WNLSF++ V ++ P T +KK+PV TCSG+SARQRR+ +K+K HV
Sbjct: 123 LEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHV------ 182
Query: 185 ISKQLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERL 244
++ +++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RL
Sbjct: 183 ------KAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRL 242
Query: 245 GCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLV 304
GCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM DLV
Sbjct: 243 GCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLV 302
Query: 305 QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRN 364
QGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSR LRLPTH+HERLGLIRN
Sbjct: 303 QGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRN 362
Query: 365 AKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSY 424
AK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSY
Sbjct: 363 AKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSY 422
Query: 425 IADNCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIG 484
IAD LENNPWHG D LK EV+KLI+ TLG RE+EIIRLY+GLD ECLTWE+ISKRIG
Sbjct: 423 IADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISKRIG 482
Query: 485 LSRERVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
LSRERVRQ+GLVALEKLK AA+ RKMEAM+LK+
Sbjct: 483 LSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
BLAST of CmaCh20G009500 vs. Swiss-Prot
Match:
SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2)
HSP 1 Score: 166.8 bits (421), Expect = 6.2e-40
Identity = 115/310 (37.10%), Postives = 175/310 (56.45%), Query Frame = 1
Query: 198 SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVME 257
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR +
Sbjct: 269 SSKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHH 328
Query: 258 CSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYV 317
+L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY
Sbjct: 329 GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 388
Query: 318 YWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSK 377
+WWI+Q V ++L + SRM+RLP HM E ++ A+ +L E G P + IAE+ +S
Sbjct: 389 HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSM 448
Query: 378 KKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWI---LKAE 437
K++ + SLD++ + N P E IAD DI I ++ +
Sbjct: 449 KRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV----IAD----PEAVTSEDILIKEFMRQD 508
Query: 438 VNKLITTTLGNREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAA 497
++K++ +LG RE+++IR G+ D T +EI + +G+SRERVRQI A KLK
Sbjct: 509 LDKVL-DSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKK 568
Query: 498 KTRKMEAMLL 503
+ ++ L+
Sbjct: 569 RNNHLQQYLV 569
BLAST of CmaCh20G009500 vs. Swiss-Prot
Match:
RPSB_NOSS1 (RNA polymerase sigma-B factor OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigB PE=3 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 2.6e-38
Identity = 97/293 (33.11%), Postives = 171/293 (58.36%), Query Frame = 1
Query: 201 LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSL 260
LLSH + + +++++ + + K L E+L EP+ + A +++ L + + +
Sbjct: 37 LLSHEQEIFFAQQVQQMMVMFTAKEELAEKLQREPTLQEWADKMQLKEDVLLQQLSQGQI 96
Query: 261 AREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 320
A++K+ +N+RLV+SIA++Y K E DL+Q G +GL RG+EKFD + G+K STY YWW
Sbjct: 97 AKQKMIQANLRLVVSIAKKYQKRNLEFLDLIQEGALGLERGVEKFDPTLGYKFSTYAYWW 156
Query: 321 IRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKV 380
IRQG++RA+ + SR +RLP HM ++L I+ + L +K G + IA++LN+ ++
Sbjct: 157 IRQGITRAIAQQSRTIRLPIHMADKLNKIKCVQRELSQKLGYIAGVTEIAQALNLEPSQI 216
Query: 381 KNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDIWILKAEVNKLI 440
+ + + + SLD G +T + D+ + +P + +L +++ L+
Sbjct: 217 REYLQLVRQPVSLDMRI-----GFEQDTQLQDLLKDDGM--SPERYAERELLYQDIHNLL 276
Query: 441 TTTLGNREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVALEKLKK 491
L +++E++ L GL C LT +IS+R+G+SRERVRQ+ AL L++
Sbjct: 277 -AKLTPQQKEVLILRFGLAGGCELTLVQISQRMGISRERVRQVEKQALTLLRR 321
BLAST of CmaCh20G009500 vs. Swiss-Prot
Match:
SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigA PE=3 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 1.7e-37
Identity = 105/313 (33.55%), Postives = 174/313 (55.59%), Query Frame = 1
Query: 186 QNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLK 245
++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A +++
Sbjct: 79 EDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEKLERDPRDSEWAEAVQ 138
Query: 246 ISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKF 305
+ R + A++K+ SN+RLV+SIA++Y G DL+Q G +GL+R EKF
Sbjct: 139 LPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 198
Query: 306 DSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLI-RNAKVRLQEKGITPS 365
D KG+K STY WWIRQ ++RA+ + SR +RLP H++E + I + K+ QE G P+
Sbjct: 199 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPT 258
Query: 366 IDRIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCL 425
+ IA + M+ +K+ K+A IS + +E L GET ++ N
Sbjct: 259 EEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDGETPEDQVSKN-- 318
Query: 426 ENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDN-ECLTWEEISKRIGLSRER 485
+L+ ++ K++ +L RER+++RL +GLD+ T EEI + ++RER
Sbjct: 319 -----------LLREDLEKVL-DSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRER 377
Query: 486 VRQIGLVALEKLK 490
+RQI AL KL+
Sbjct: 379 IRQIEAKALRKLR 377
BLAST of CmaCh20G009500 vs. Swiss-Prot
Match:
SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA1 PE=3 SV=2)
HSP 1 Score: 158.3 bits (399), Expect = 2.2e-37
Identity = 107/313 (34.19%), Postives = 170/313 (54.31%), Query Frame = 1
Query: 186 QNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLK 245
++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++
Sbjct: 88 EDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQLDRLPSDAEWAAAVD 147
Query: 246 ISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKF 305
+ R + A++K+ SN+RLV+SIA++Y G DL+Q G +GL+R EKF
Sbjct: 148 SPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 207
Query: 306 DSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLI-RNAKVRLQEKGITPS 365
D KG+K STY WWIRQ ++RA+ + SR +RLP H++E + I + K+ QE G P+
Sbjct: 208 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPT 267
Query: 366 IDRIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCL 425
+ IA + M+ +K+ K+A IS + +E L GET +A N L
Sbjct: 268 EEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVAKNLL 327
Query: 426 ENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDN-ECLTWEEISKRIGLSRER 485
E + + +TL RER+++RL +GLD+ T EEI + ++RER
Sbjct: 328 R--------------EDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRER 386
Query: 486 VRQIGLVALEKLK 490
+RQI AL KL+
Sbjct: 388 IRQIEAKALRKLR 386
BLAST of CmaCh20G009500 vs. TrEMBL
Match:
A0A0A0LQR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431090 PE=4 SV=1)
HSP 1 Score: 838.2 bits (2164), Expect = 5.3e-240
Identity = 446/510 (87.45%), Postives = 468/510 (91.76%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T AI GLGAAKRLLNSSSYYSDFTEK+LYAND+R+GQTQVS +KSVVI A+SS NFS
Sbjct: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVI-AKSSANFS 60
Query: 62 PRNQSSNRHVH-CIKAA------PSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSM 121
PR SSNRH CIKA PSSP AEP HN+T WEDEET+LK TVE LLLLQKSM
Sbjct: 61 PRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWEDEETELKYTVEALLLLQKSM 120
Query: 122 LEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 181
LEKQW+LSF+QTV D P+ KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISK
Sbjct: 121 LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180
Query: 182 QLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 241
QLRPTI+ ELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 240
Query: 242 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 301
PSEDQLAISLKISRA+LRS +ME SLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
Query: 302 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKV 361
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLPTH+HERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
Query: 362 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 421
+LQEKGITPS+DRIAESLNMSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
Query: 422 NCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSR 481
NCLENNPWHGTD WILK EVN+LI TLG+REREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
Query: 482 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
ERVRQ+GLVALEKLKKAAKTRKMEAMLLKH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508
BLAST of CmaCh20G009500 vs. TrEMBL
Match:
A0A0G2SY45_9ROSI (Sigma factor OS=Melianthus villosus GN=sig1 PE=2 SV=1)
HSP 1 Score: 694.5 bits (1791), Expect = 9.5e-197
Identity = 371/507 (73.18%), Postives = 419/507 (82.64%), Query Frame = 1
Query: 5 TTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFSPRN 64
T A+ GL A KRLL+SS YYSD+ EK+ YANDH G +PTK+VVI +SS N SPR
Sbjct: 3 TAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDH--GHYNATPTKTVVIAKKSS-NCSPRF 62
Query: 65 QSSNRHVHCIKAAP------SSP-TAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSMLEK 124
SSNR IKA S P TAE S +++ D++ +VE LLLLQKSMLEK
Sbjct: 63 PSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSMLEK 122
Query: 125 QWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLR 184
QWNLSFD+T+L D + KT K++PVTCSGVSARQRRMS+KRKI S++ M Q +LR
Sbjct: 123 QWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSMMQTSRCNRLR 182
Query: 185 PTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSE 244
I EL+QNR KGYVKG++SEELLSHAEVV LSKKIK GL+LEE K RLK+RLGCEPS+
Sbjct: 183 TIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEPSD 242
Query: 245 DQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIG 304
+QLA SL+ISRA+LRS +E LAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGGLIG
Sbjct: 243 EQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIG 302
Query: 305 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVRLQ 364
LLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR LRLPTH+HERLGLIRNAK+RL+
Sbjct: 303 LLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKIRLE 362
Query: 365 EKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCL 424
EKGITPSI+R+AE LNMSKKK++NATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCL
Sbjct: 363 EKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCL 422
Query: 425 ENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRERV 484
+NNPWHG D W LK EV KLI TLG REREIIRLYHGLDNECLTWE+ISKRIGLSRERV
Sbjct: 423 DNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRERV 482
Query: 485 RQIGLVALEKLKKAAKTRKMEAMLLKH 505
RQ+GLVA+EKLK AA+ + MEAML+KH
Sbjct: 483 RQVGLVAMEKLKHAARRKHMEAMLVKH 506
BLAST of CmaCh20G009500 vs. TrEMBL
Match:
A0A067E9X0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010521mg PE=4 SV=1)
HSP 1 Score: 691.4 bits (1783), Expect = 8.1e-196
Identity = 369/509 (72.50%), Postives = 419/509 (82.32%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T A+ GL A KRLL+SS YYSD +EK Y ND +QV TK+VV A+ S N++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVV-AAKKSSNYN 60
Query: 62 PRNQSSNRHVHCIKAAPS------SPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSML 121
P SSNR IKA + TAEP E+E ++L +VE LLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 122 EKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 181
EKQWNLSF++TVL D+P KT KKVPVTCSGVSARQRR++SK+KI S++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQ 180
Query: 182 LRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
LR I+ EL+QNRLKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 242 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 301
S +QLA SL+ISR +L+S +MECSLAREKL MSNVRLVMSIAQRYD MGA+M DLVQGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 300
Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVR 361
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP H+HERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 362 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
L+EKG+TPS+DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 422 CLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
+ENNPWHG D W LK EVNKLI TLG REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 482 RVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
RVRQ+GLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of CmaCh20G009500 vs. TrEMBL
Match:
V4SS73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031289mg PE=4 SV=1)
HSP 1 Score: 688.0 bits (1774), Expect = 8.9e-195
Identity = 366/509 (71.91%), Postives = 418/509 (82.12%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T A+ GL A KRLL+SS YYSD +EK Y ND +QV TK+VV A+ S N++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVV-AAKKSSNYN 60
Query: 62 PRNQSSNRHVHCIKAAPS------SPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSML 121
P SSNR IKA + TAEP E+E ++L +VE LLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 122 EKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 181
EKQWNLSF++TVL D+P KT KKVPVTCSGVSARQRR++SK+KI S++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQ 180
Query: 182 LRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
LR I+ EL+QN LKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 242 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 301
S +QLA SL+ISR +L+S +MECSLAREKL MSNVRLVMSIAQRYD MGA+M DL+QGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 300
Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVR 361
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP H+HERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 362 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
L+EKG+TP++DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 422 CLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
+ENNPWHG D W LK EVNKLI TLG REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 482 RVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
RVRQ+GLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of CmaCh20G009500 vs. TrEMBL
Match:
A0A0B0MW11_GOSAR (RNA polymerase sigma factor rpoD OS=Gossypium arboreum GN=F383_22349 PE=4 SV=1)
HSP 1 Score: 686.0 bits (1769), Expect = 3.4e-194
Identity = 367/510 (71.96%), Postives = 416/510 (81.57%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T A+ GL KRLL+SS YS+ +K+ YA D+ Q TK++++ RSS N S
Sbjct: 1 MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSS-NCS 60
Query: 62 PRNQSSNRHVHCIKA-------APSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSM 121
SSNRH IKA A S T EP +H + E E DL C+VE LLLLQKSM
Sbjct: 61 QNLPSSNRHTQLIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSM 120
Query: 122 LEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 181
LEKQW LSF++T+ ++P KT KVPVTCSGVSARQRR ++KRKI S++ M QP +K
Sbjct: 121 LEKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPN-AK 180
Query: 182 QLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 241
QLR I ELLQNRLKGYVKG++SE+LLSHAEVVRLSKKIK GL+LEE RLKERLGCE
Sbjct: 181 QLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCE 240
Query: 242 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 301
PS++QLA SLK+SRA+LRS +ECSLAREKLAMSNVRLVMSIAQRYD MGAEM DL+QGG
Sbjct: 241 PSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGG 300
Query: 302 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKV 361
LIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSR LRLPT++HERLGLIRNAK
Sbjct: 301 LIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKY 360
Query: 362 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 421
RL+EKGITP+IDRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD
Sbjct: 361 RLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIAD 420
Query: 422 NCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSR 481
N +ENNPWHG D W LK EVN+LI TLG REREIIRLYHGLD E LTWE+ISKRIGLSR
Sbjct: 421 NHVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSR 480
Query: 482 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
ERVRQ+GLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 ERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of CmaCh20G009500 vs. TAIR10
Match:
AT1G64860.1 (AT1G64860.1 sigma factor A)
HSP 1 Score: 628.6 bits (1620), Expect = 3.2e-180
Identity = 343/513 (66.86%), Postives = 405/513 (78.95%), Query Frame = 1
Query: 5 TTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFSPRN 64
T A+ GL KRLL+SS Y+SD TEK L NDH Q ++ TKS ITA+ + N+SP
Sbjct: 3 TAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSG-ITAKKASNYSPSF 62
Query: 65 QSSNRHVHCIKAAPSS----PTAEPGLHNSTIWE------DEETDLKCTVEVLLLLQKSM 124
SSNRH KA S T +P L N T E D++ + +VE +LLLQKSM
Sbjct: 63 PSSNRHTQSAKALKESVDVASTEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQKSM 122
Query: 125 LEKQWNLSFDQTVLADAPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHVLMAQPR 184
LEK WNLSF++ V ++ P T +KK+PV TCSG+SARQRR+ +K+K HV
Sbjct: 123 LEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHV------ 182
Query: 185 ISKQLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERL 244
++ +++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RL
Sbjct: 183 ------KAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRL 242
Query: 245 GCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLV 304
GCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM DLV
Sbjct: 243 GCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLV 302
Query: 305 QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRN 364
QGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSR LRLPTH+HERLGLIRN
Sbjct: 303 QGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRN 362
Query: 365 AKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSY 424
AK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSY
Sbjct: 363 AKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSY 422
Query: 425 IADNCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIG 484
IAD LENNPWHG D LK EV+KLI+ TLG RE+EIIRLY+GLD ECLTWE+ISKRIG
Sbjct: 423 IADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISKRIG 482
Query: 485 LSRERVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
LSRERVRQ+GLVALEKLK AA+ RKMEAM+LK+
Sbjct: 483 LSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502
BLAST of CmaCh20G009500 vs. TAIR10
Match:
AT1G08540.1 (AT1G08540.1 RNApolymerase sigma subunit 2)
HSP 1 Score: 166.8 bits (421), Expect = 3.5e-41
Identity = 115/310 (37.10%), Postives = 175/310 (56.45%), Query Frame = 1
Query: 198 SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVME 257
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR +
Sbjct: 269 SSKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHH 328
Query: 258 CSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYV 317
+L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY
Sbjct: 329 GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYA 388
Query: 318 YWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVRL-QEKGITPSIDRIAESLNMSK 377
+WWI+Q V ++L + SRM+RLP HM E ++ A+ +L E G P + IAE+ +S
Sbjct: 389 HWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSM 448
Query: 378 KKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWI---LKAE 437
K++ + SLD++ + N P E IAD DI I ++ +
Sbjct: 449 KRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV----IAD----PEAVTSEDILIKEFMRQD 508
Query: 438 VNKLITTTLGNREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLKKAA 497
++K++ +LG RE+++IR G+ D T +EI + +G+SRERVRQI A KLK
Sbjct: 509 LDKVL-DSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKK 568
Query: 498 KTRKMEAMLL 503
+ ++ L+
Sbjct: 569 RNNHLQQYLV 569
BLAST of CmaCh20G009500 vs. TAIR10
Match:
AT5G13730.1 (AT5G13730.1 sigma factor 4)
HSP 1 Score: 148.7 bits (374), Expect = 9.8e-36
Identity = 117/341 (34.31%), Postives = 168/341 (49.27%), Query Frame = 1
Query: 155 SSKRKIQSKHVLMAQPRISKQLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKI 214
S KR+ + + + R+ + E + V G LS E V+L +
Sbjct: 76 SEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVVGASRSGFLSRLEEVQLCLYL 135
Query: 215 KVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSL----AREKLAMSNV 274
K G LE T ++E + +++ L R K + S E AREK+
Sbjct: 136 KEGAKLENLGTSVEEN-------EMVSVLLASGRGKKKRSANEILCRRKEAREKITRCYR 195
Query: 275 RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV 334
RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+
Sbjct: 196 RLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIA 255
Query: 335 ENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKV 394
SR+++LP M E + A L K PS + IAE LN++ V+ A E
Sbjct: 256 HKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSP 315
Query: 395 FSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGNREREI 454
SLDR A + G I E P +K E+ +L+ +L RE +
Sbjct: 316 VSLDRVASQN-----GRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLL-GSLTARESRV 375
Query: 455 IRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVALEKLK 490
+ LY GL+ E +++EEI K + LSRERVRQI +AL+KL+
Sbjct: 376 LGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLR 403
BLAST of CmaCh20G009500 vs. TAIR10
Match:
AT2G36990.1 (AT2G36990.1 RNApolymerase sigma-subunit F)
HSP 1 Score: 141.7 bits (356), Expect = 1.2e-33
Identity = 103/353 (29.18%), Postives = 184/353 (52.12%), Query Frame = 1
Query: 149 ARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINSELLQNRLKGYVKGLLSEELLSHAEVV 208
A+ RR + + + + K+ + +++ + L+ ++ G +++LL+ E
Sbjct: 198 AKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADND---DALQLFLWGPETKQLLTAKEEA 257
Query: 209 RLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMS 268
L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +
Sbjct: 258 ELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITA 317
Query: 269 NVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRA 328
N+RLV+ IA++Y G DL+Q G +GL++ +EKF G + +TY YWWIRQ + ++
Sbjct: 318 NLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKS 377
Query: 329 LVENSRMLRLPTHMHERLGLIRNA-KVRLQEKGITPSIDRIAESLNMSKKKVKNATEAIS 388
+ +NSR +RLP +++ LG + A K +QE PS + +A + +S +K+
Sbjct: 378 IFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTR 437
Query: 389 KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGNRER 448
S+ + + + T D+ +E P +++ V L+ L +ER
Sbjct: 438 TPLSMQQPIWSDQD----TTFQEITPDSGIE-TPTMSVGKQLMRNHVRNLL-NVLSPKER 497
Query: 449 EIIRLYHGLD-NECLTWEEISKRIGLSRERVRQIGLVALEKLKKAAKTRKMEA 500
II+L G+D + + EI + GLS+ERVRQ+ AL +LK+ + + A
Sbjct: 498 RIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHA 541
BLAST of CmaCh20G009500 vs. TAIR10
Match:
AT3G53920.1 (AT3G53920.1 RNApolymerase sigma-subunit C)
HSP 1 Score: 95.5 bits (236), Expect = 9.9e-20
Identity = 92/346 (26.59%), Postives = 174/346 (50.29%), Query Frame = 1
Query: 154 MSSKRKIQSKHVLMA-------QPRISKQLRPTINSELLQNRLKGYVKGLLSEELLSHAE 213
+SS+RK++ K + Q + LR T N+ + R++ K E +S E
Sbjct: 220 VSSRRKVKKKARRSSVTAENGDQSSLPIGLRTTWNN-IDVPRVRRPPKYRKKRERISRNE 279
Query: 214 VVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLA 273
+S +K+ +E +T+L+E G S A + ++ L ++ R++L
Sbjct: 280 T-EMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELV 339
Query: 274 MSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 333
S LV+ +A+ Y +G +DL+Q G +G+L+G E+FD ++G+K STYV +WIR+ +S
Sbjct: 340 KSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMS 399
Query: 334 RALVENSRMLRLPTHMHERLGLIRNAKVRLQ-EKGITPSID-RIAESLNMSKKKVKNATE 393
+ ++R + +P+ + + I+ A+ L+ GI + D IA+ S KK++ A +
Sbjct: 400 TMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQ 459
Query: 394 AISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGN 453
+ V S+D++ + D +E +P + +++ L+ L
Sbjct: 460 CLKVVGSIDKKVGDCFT----TKFLEFTPDTTME-SPEEAVMRQSARRDIHDLL-EGLEP 519
Query: 454 REREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVALEKLK 490
RE++++ L +GL D + EEI K + +S+E +R+I A+ KL+
Sbjct: 520 REKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLR 557
BLAST of CmaCh20G009500 vs. NCBI nr
Match:
gi|659125683|ref|XP_008462812.1| (PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo])
HSP 1 Score: 864.4 bits (2232), Expect = 1.0e-247
Identity = 457/510 (89.61%), Postives = 473/510 (92.75%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M TTAI GLGAAKRLLNSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SS NFS
Sbjct: 1 MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVI-AKSSANFS 60
Query: 62 PRNQSSNRHVH-CIKAA------PSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSM 121
P SNRH CIKA PSSPTAEP L N+TIWEDEETDLKCTVE LLLLQKSM
Sbjct: 61 PSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSM 120
Query: 122 LEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 181
LEKQWNLSF+QTV D PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISK
Sbjct: 121 LEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180
Query: 182 QLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 241
QLRPTI+ ELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCE 240
Query: 242 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 301
PSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
Query: 302 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKV 361
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLPTH+HERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
Query: 362 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 421
+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
Query: 422 NCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSR 481
NCLENNPWHGTD WILKAEVNKLI TLG+REREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
Query: 482 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
ERVRQ+GLVALEKLKKAAKTRKMEAML+KH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLIKH 509
BLAST of CmaCh20G009500 vs. NCBI nr
Match:
gi|449468291|ref|XP_004151855.1| (PREDICTED: RNA polymerase sigma factor sigA [Cucumis sativus])
HSP 1 Score: 838.2 bits (2164), Expect = 7.6e-240
Identity = 446/510 (87.45%), Postives = 468/510 (91.76%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T AI GLGAAKRLLNSSSYYSDFTEK+LYAND+R+GQTQVS +KSVVI A+SS NFS
Sbjct: 1 MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVI-AKSSANFS 60
Query: 62 PRNQSSNRHVH-CIKAA------PSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSM 121
PR SSNRH CIKA PSSP AEP HN+T WEDEET+LK TVE LLLLQKSM
Sbjct: 61 PRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWEDEETELKYTVEALLLLQKSM 120
Query: 122 LEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 181
LEKQW+LSF+QTV D P+ KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISK
Sbjct: 121 LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180
Query: 182 QLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 241
QLRPTI+ ELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 240
Query: 242 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 301
PSEDQLAISLKISRA+LRS +ME SLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300
Query: 302 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKV 361
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLPTH+HERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360
Query: 362 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 421
+LQEKGITPS+DRIAESLNMSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
Query: 422 NCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSR 481
NCLENNPWHGTD WILK EVN+LI TLG+REREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
Query: 482 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
ERVRQ+GLVALEKLKKAAKTRKMEAMLLKH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLLKH 508
BLAST of CmaCh20G009500 vs. NCBI nr
Match:
gi|807411296|gb|AKC88633.1| (sigma factor [Melianthus villosus])
HSP 1 Score: 694.5 bits (1791), Expect = 1.4e-196
Identity = 371/507 (73.18%), Postives = 419/507 (82.64%), Query Frame = 1
Query: 5 TTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFSPRN 64
T A+ GL A KRLL+SS YYSD+ EK+ YANDH G +PTK+VVI +SS N SPR
Sbjct: 3 TAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDH--GHYNATPTKTVVIAKKSS-NCSPRF 62
Query: 65 QSSNRHVHCIKAAP------SSP-TAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSMLEK 124
SSNR IKA S P TAE S +++ D++ +VE LLLLQKSMLEK
Sbjct: 63 PSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSMLEK 122
Query: 125 QWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLR 184
QWNLSFD+T+L D + KT K++PVTCSGVSARQRRMS+KRKI S++ M Q +LR
Sbjct: 123 QWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSMMQTSRCNRLR 182
Query: 185 PTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSE 244
I EL+QNR KGYVKG++SEELLSHAEVV LSKKIK GL+LEE K RLK+RLGCEPS+
Sbjct: 183 TIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEPSD 242
Query: 245 DQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIG 304
+QLA SL+ISRA+LRS +E LAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGGLIG
Sbjct: 243 EQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIG 302
Query: 305 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVRLQ 364
LLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSR LRLPTH+HERLGLIRNAK+RL+
Sbjct: 303 LLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKIRLE 362
Query: 365 EKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCL 424
EKGITPSI+R+AE LNMSKKK++NATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCL
Sbjct: 363 EKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCL 422
Query: 425 ENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRERV 484
+NNPWHG D W LK EV KLI TLG REREIIRLYHGLDNECLTWE+ISKRIGLSRERV
Sbjct: 423 DNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRERV 482
Query: 485 RQIGLVALEKLKKAAKTRKMEAMLLKH 505
RQ+GLVA+EKLK AA+ + MEAML+KH
Sbjct: 483 RQVGLVAMEKLKHAARRKHMEAMLVKH 506
BLAST of CmaCh20G009500 vs. NCBI nr
Match:
gi|641828896|gb|KDO48032.1| (hypothetical protein CISIN_1g010521mg [Citrus sinensis])
HSP 1 Score: 691.4 bits (1783), Expect = 1.2e-195
Identity = 369/509 (72.50%), Postives = 419/509 (82.32%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T A+ GL A KRLL+SS YYSD +EK Y ND +QV TK+VV A+ S N++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVV-AAKKSSNYN 60
Query: 62 PRNQSSNRHVHCIKAAPS------SPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSML 121
P SSNR IKA + TAEP E+E ++L +VE LLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 122 EKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 181
EKQWNLSF++TVL D+P KT KKVPVTCSGVSARQRR++SK+KI S++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQ 180
Query: 182 LRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
LR I+ EL+QNRLKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 242 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 301
S +QLA SL+ISR +L+S +MECSLAREKL MSNVRLVMSIAQRYD MGA+M DLVQGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 300
Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVR 361
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP H+HERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 362 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
L+EKG+TPS+DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 422 CLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
+ENNPWHG D W LK EVNKLI TLG REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 482 RVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
RVRQ+GLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
BLAST of CmaCh20G009500 vs. NCBI nr
Match:
gi|568862454|ref|XP_006484698.1| (PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis])
HSP 1 Score: 689.5 bits (1778), Expect = 4.4e-195
Identity = 368/509 (72.30%), Postives = 418/509 (82.12%), Query Frame = 1
Query: 2 MATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNFS 61
M T A+ GL A KRLL+SS YYSD +EK Y ND +QV TK+VV A+ S N++
Sbjct: 1 MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVV-AAKKSSNYN 60
Query: 62 PRNQSSNRHVHCIKAAPS------SPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSML 121
P SSNR IKA + TAEP E+E ++L +VE LLLLQKSML
Sbjct: 61 PSFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 120
Query: 122 EKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 181
EKQWNLSF++TVL D+P KT KKVPVTCSGVSARQRR++SK+KI S++ + Q SKQ
Sbjct: 121 EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQ 180
Query: 182 LRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
LR I+ EL+QN LKGYVKG++SEELL+HAEVVRLSKKIK GL+L++ K RLKERLGCEP
Sbjct: 181 LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 240
Query: 242 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 301
S +QLA SL+ISR +L+S +MECSLAREKL MSNVRLVMSIAQRYD MGA+M DLVQGGL
Sbjct: 241 SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 300
Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKVR 361
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSR LRLP H+HERLGLIRNAK+R
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 360
Query: 362 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
L+EKG+TPS+DRIAE LNMS+KKV+NATEAI KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 420
Query: 422 CLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
+ENNPWHG D W LK EVNKLI TLG REREIIRLY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 421 RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 480
Query: 482 RVRQIGLVALEKLKKAAKTRKMEAMLLKH 505
RVRQ+GLVALEKLK AA+ +KMEAML+KH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKMEAMLVKH 508
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| SIGA_ARATH | 5.8e-179 | 66.86 | RNA polymerase sigma factor sigA OS=Arabidopsis thaliana GN=SIGA PE=1 SV=1 | [more] |
| SIGB_ARATH | 6.2e-40 | 37.10 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2 | [more] |
| RPSB_NOSS1 | 2.6e-38 | 33.11 | RNA polymerase sigma-B factor OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sig... | [more] |
| SIGA_NOSS1 | 1.7e-37 | 33.55 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=... | [more] |
| SIGA1_SYNE7 | 2.2e-37 | 34.19 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LQR2_CUCSA | 5.3e-240 | 87.45 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G431090 PE=4 SV=1 | [more] |
| A0A0G2SY45_9ROSI | 9.5e-197 | 73.18 | Sigma factor OS=Melianthus villosus GN=sig1 PE=2 SV=1 | [more] |
| A0A067E9X0_CITSI | 8.1e-196 | 72.50 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010521mg PE=4 SV=1 | [more] |
| V4SS73_9ROSI | 8.9e-195 | 71.91 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031289mg PE=4 SV=1 | [more] |
| A0A0B0MW11_GOSAR | 3.4e-194 | 71.96 | RNA polymerase sigma factor rpoD OS=Gossypium arboreum GN=F383_22349 PE=4 SV=1 | [more] |
