Lsi09G016420 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G016420
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Unknown protein
Location	chr09 : 24734069 .. 24735130 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAAGCCCCCCTCCAAGAACAAGAATCCCAAGAAAAGAACTCTGCAAATATCAAAAACGATGTTGTTCAATTTCGTCGTTAACGATATGCGCGCTCTGATTGATGCGGCCACCACATTGGGAATGGTCGATCGAATGGCGGATGCAACATTTTCACCGGAAATGTTTTGCATAATGGCCGATTCATATCCTTCCATTAACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGATCATTACGTCTGCAACCAGCTTAAGCGTTCTTGGTTCTTCCTCACCCACATTTTCCCTCTTGCCCTAGAATTGGAAGATTCTGGTTACACTTCTTTGACCTTCTCTATCCCTTACCCTGAACGCGCCGAACTCAAATTCGAAGGCCCAAATGGTAATTTTCTTTTACTATTCCCCTGCTCTCCCTTCTTCTTCTTTCAAGAAATTCTTTAATTTCTTTTTTTCTTTTTTTCTTTTTCTTTTTTAGGCCTTCTTCGCGAAATCGATTTCGAATTGTTTTGGTCCCATAATCCATTGTACATCGACGAATTTGATCTCTCAATTTTTGCTTCCATGGATTCTCGAGAATTCTCCTACCTTGTCGATGAGTATCATATGTTTGATTACGGTAATTATAATTCATCTTTCATTTTTTAATTTAAGTTAAAATACTAGCTATTTGATTGGTTTATTGTTATTATTTACAGTTCATGTTACTATAACGAGTACACGAGTGACAGTCTCTTATTCAATGATGCAAGAGACAATTCTTACCTCACAGGTATATATACTAATCTTGAGAATATTAATTAATGAATATATAAATATGTTTTAATTATTGTTAAATTTAGGATGGACAATGCATAATTGGGGGTGTTAGAGCACCAAATCAAATTCAATTCTTAATCACTTTGAATCCACCAGAAGCTTTCCATCATATTGCAAGTCTAACGAAGAGGATATGGCTCTTCAAGACATGTAATTCTACCAAAGGTTTAATTACTGCTCCTCTTGGATTGAATAGTCGACTTGCCGCTTTTTTCTGTGATGTGTTTGCAGAATAA

mRNA sequence

CTAAAAGCCCCCCTCCAAGAACAAGAATCCCAAGAAAAGAACTCTGCAAATATCAAAAACGATGTTGTTCAATTTCGTCGTTAACGATATGCGCGCTCTGATTGATGCGGCCACCACATTGGGAATGGTCGATCGAATGGCGGATGCAACATTTTCACCGGAAATGTTTTGCATAATGGCCGATTCATATCCTTCCATTAACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGATCATTACGTCTGCAACCAGCTTAAGCGTTCTTGGTTCTTCCTCACCCACATTTTCCCTCTTGCCCTAGAATTGGAAGATTCTGGTTACACTTCTTTGACCTTCTCTATCCCTTACCCTGAACGCGCCGAACTCAAATTCGAAGGCCCAAATGGCCTTCTTCGCGAAATCGATTTCGAATTGTTTTGGTCCCATAATCCATTGTACATCGACGAATTTGATCTCTCAATTTTTGCTTCCATGGATTCTCGAGAATTCTCCTACCTTGTCGATGAGTATCATATGTTTGATTACGTTCATGTTACTATAACGAGTACACGAGTGACAGTCTCTTATTCAATGATGCAAGAGACAATTCTTACCTCACAGGATGGACAATGCATAATTGGGGGTGTTAGAGCACCAAATCAAATTCAATTCTTAATCACTTTGAATCCACCAGAAGCTTTCCATCATATTGCAAGTCTAACGAAGAGGATATGGCTCTTCAAGACATGTAATTCTACCAAAGGTTTAATTACTGCTCCTCTTGGATTGAATAGTCGACTTGCCGCTTTTTTCTGTGATGTGTTTGCAGAATAA

Coding sequence (CDS)

ATGTTGTTCAATTTCGTCGTTAACGATATGCGCGCTCTGATTGATGCGGCCACCACATTGGGAATGGTCGATCGAATGGCGGATGCAACATTTTCACCGGAAATGTTTTGCATAATGGCCGATTCATATCCTTCCATTAACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGATCATTACGTCTGCAACCAGCTTAAGCGTTCTTGGTTCTTCCTCACCCACATTTTCCCTCTTGCCCTAGAATTGGAAGATTCTGGTTACACTTCTTTGACCTTCTCTATCCCTTACCCTGAACGCGCCGAACTCAAATTCGAAGGCCCAAATGGCCTTCTTCGCGAAATCGATTTCGAATTGTTTTGGTCCCATAATCCATTGTACATCGACGAATTTGATCTCTCAATTTTTGCTTCCATGGATTCTCGAGAATTCTCCTACCTTGTCGATGAGTATCATATGTTTGATTACGTTCATGTTACTATAACGAGTACACGAGTGACAGTCTCTTATTCAATGATGCAAGAGACAATTCTTACCTCACAGGATGGACAATGCATAATTGGGGGTGTTAGAGCACCAAATCAAATTCAATTCTTAATCACTTTGAATCCACCAGAAGCTTTCCATCATATTGCAAGTCTAACGAAGAGGATATGGCTCTTCAAGACATGTAATTCTACCAAAGGTTTAATTACTGCTCCTCTTGGATTGAATAGTCGACTTGCCGCTTTTTTCTGTGATGTGTTTGCAGAATAA

Protein sequence

MLFNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHYVCNQLKRSWFFLTHIFPLALELEDSGYTSLTFSIPYPERAELKFEGPNGLLREIDFELFWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETILTSQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLNSRLAAFFCDVFAE

Homology

[Close]

BLAST of Lsi09G016420 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 9.2e-92
Identity = 164/250 (65.60%), Postives = 198/250 (79.20%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           FNF+VN+MR L+DA  TLG+ D   DATFSPEMFC+MADS  SI++AIGLQLWPPFFDHY
Sbjct: 4   FNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDHY 63

Query: 63  VCNQLKRSWFFLTHIFPLALELEDSGYTSLTFSIPY-PERAELKFEGPNGLLREIDFELF 122
            C  LK SWFF + IFPLA  L+D GYTS +FSI   P  A+++F+GP  LL E+   L 
Sbjct: 64  FCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRLV 123

Query: 123 WSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETILTS 182
           + H PL I +FDLS+F SMDS++FS L+ +YHMFD VHVTITS RV  SYS MQETIL+ 
Sbjct: 124 FCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILSP 183

Query: 183 QDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLNSR 242
           Q+GQCIIGG+RAP++++F+ITL P E F+HIAS TKR+W FK CNS +GLITAPLGLN+R
Sbjct: 184 QNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNAR 243

Query: 243 LAAFFCDVFA 252
           L AFFCDVFA
Sbjct: 244 LVAFFCDVFA 253

[Close]

BLAST of Lsi09G016420 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.6e-82
Identity = 158/255 (61.96%), Postives = 195/255 (76.47%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           F   V+DM+ LID+  TLG+VD MADA FSP+ FCIMADS  SI++A G+QLWPPFFD +
Sbjct: 4   FRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDSF 63

Query: 63  VCNQLKRS-WFFLTHIFPLALELEDSGYTSLTFSIPYPER-----AELKFEGPNGLLREI 122
             + +++  WF LTH+F LA+EL +SGYTSLTFSI   ER     A+ KFEGPNGLLR++
Sbjct: 64  YSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRDV 123

Query: 123 DFELFWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQE 182
           +F L     PL I + DLS F SMDS EFS ++ EYHMFDYV V ITS RV+ SY+++QE
Sbjct: 124 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 183

Query: 183 TILTSQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPL 242
           TI+T +DGQC+IGGVRAPNQ+QF+IT++ P AF H AS +KRIWLFK  NSTKG+ITAPL
Sbjct: 184 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 243

Query: 243 GLNSRLAAFFCDVFA 252
           GL  RL +FFCDV A
Sbjct: 244 GLYGRLVSFFCDVTA 255

[Close]

BLAST of Lsi09G016420 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.0e-79
Identity = 151/249 (60.64%), Postives = 190/249 (76.31%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           F   V+DM+ LID+  TLG+VD MADA FSP+MFCI+ADS  S+ +A GLQLWPPFFD +
Sbjct: 4   FRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDSF 63

Query: 63  VCNQLKRS-WFFLTHIFPLALELEDSGYTSLTFSIPYPER--AELKFEGPNGLLREIDFE 122
             + L++  WF LTH+FPLALEL +SG TSLTFSI       A+ KFEGPNGLLRE++F 
Sbjct: 64  YSDNLRQIFWFRLTHLFPLALELLESGCTSLTFSIERFRHNYAQFKFEGPNGLLREVNFR 123

Query: 123 LFWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETIL 182
           L     PL I + DLS F +MDS+EFSY++ +Y+MFDYV V ITS RV+ S S +QET +
Sbjct: 124 LTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQETTI 183

Query: 183 TSQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLN 242
           +++DG+CI+GGVRAP Q+QF+IT++ P AF H AS +KRIWLFK  NSTKG+ITAPLGL 
Sbjct: 184 SAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLY 243

Query: 243 SRLAAFFCD 249
            RL +FFCD
Sbjct: 244 GRLVSFFCD 252

[Close]

BLAST of Lsi09G016420 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16
Identity = 67/246 (27.24%), Postives = 118/246 (47.97%), Query Frame = 1


Query: 5   FVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHYVC 64
           F + ++   +DA   L      A+   SP MF ++   + ++   +  Q+ P FF+++  
Sbjct: 2   FSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHH-NLELNVAFQMMPQFFNYFFS 61

Query: 65  NQLKRSWFFLTHIFPLALELEDSGYTSLTFSI-PYPERAELKFEGPNG---LLREIDFEL 124
           N+   S   +  +F     +++   TSL+F +    +R  LKF  P     L+R+     
Sbjct: 62  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 121

Query: 125 FWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETILT 184
               +   +   DL  F S+DS++F  +V     + +V VT T + V  S + ++E I  
Sbjct: 122 AVKED---MGNIDLETFVSIDSQQFRRVVTGCRDY-FVRVTTTHSHVRFS-NEIKEFIFA 181

Query: 185 SQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLNS 244
            + G+CI+ GV      +FLI + P   F++I    KR+WLFK+ +     I AP+GL +
Sbjct: 182 REGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFA 241

Query: 245 RLAAFF 247
           R   +F
Sbjct: 242 RFVIYF 241

[Close]

BLAST of Lsi09G016420 vs. TrEMBL
Match: A0A0A0K833_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002320 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 1


Query: 2   LFNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFD- 61
           +F F+++++ + +DA + L  +  + +  FSPEMF IMA+  PS +  I LQL+PPFF+ 
Sbjct: 1   MFVFILDEIHSFVDAVSALAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60

Query: 62  HYVCNQLKRSWFFLTHIFPLALELEDSGYTSLTFSIPYPERAELKFEGPNG 112
            Y C QL  SW ++ H FP    LE +G++SLTFS      A+L F   +G
Sbjct: 61  QYSCQQLHYSWIYINHFFPEMFHLERTGFSSLTFSFADSHHADLTFCSRDG 111

[Close]

BLAST of Lsi09G016420 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 8.6e-99
Identity = 174/253 (68.77%), Postives = 210/253 (83.00%), Query Frame = 1


Query: 1   MLFNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFD 60
           M FNFVVN+M+ LIDA  TLG+ D++ADATFSPEMFC+M DS  SI++ IGLQLWPPFFD
Sbjct: 1   MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFD 60

Query: 61  HYVCNQLKRSWFFLTHIFPLALELEDSGYTSLTFSI-PYPERAELKFEGPNGLLREIDFE 120
           HY C++L+ SWFF   IFPLA +L+DSGYTS +FSI P P+ A++KF+GPNGLL E +FE
Sbjct: 61  HYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGPNGLLHETNFE 120

Query: 121 LFWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETIL 180
           L +SH+PL I +FDLS+F SMDS+EFS ++ +YHMFD VHVTITS RV  SYS+MQETIL
Sbjct: 121 LVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETIL 180

Query: 181 TSQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLN 240
             Q+GQCIIGG++APNQ+QF++TL P E F+HIAS TKR+W FK CNS KGLITAPLGLN
Sbjct: 181 NQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLN 240

Query: 241 SRLAAFFCDVFAE 253
           SRL A F DVFAE
Sbjct: 241 SRLVACFFDVFAE 253

[Close]

BLAST of Lsi09G016420 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus])

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-91
Identity = 164/250 (65.60%), Postives = 198/250 (79.20%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           FNF+VN+MR L+DA  TLG+ D   DATFSPEMFC+MADS  SI++AIGLQLWPPFFDHY
Sbjct: 4   FNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDHY 63

Query: 63  VCNQLKRSWFFLTHIFPLALELEDSGYTSLTFSIPY-PERAELKFEGPNGLLREIDFELF 122
            C  LK SWFF + IFPLA  L+D GYTS +FSI   P  A+++F+GP  LL E+   L 
Sbjct: 64  FCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRLV 123

Query: 123 WSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETILTS 182
           + H PL I +FDLS+F SMDS++FS L+ +YHMFD VHVTITS RV  SYS MQETIL+ 
Sbjct: 124 FCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILSP 183

Query: 183 QDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLNSR 242
           Q+GQCIIGG+RAP++++F+ITL P E F+HIAS TKR+W FK CNS +GLITAPLGLN+R
Sbjct: 184 QNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNAR 243

Query: 243 LAAFFCDVFA 252
           L AFFCDVFA
Sbjct: 244 LVAFFCDVFA 253

[Close]

BLAST of Lsi09G016420 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88
Identity = 162/250 (64.80%), Postives = 195/250 (78.00%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           FNF+VN+MR L+DA  TLG+ D   DATFSPEMFC+MADS  SI++AIGLQLWPPFFDHY
Sbjct: 4   FNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDHY 63

Query: 63  VCNQLKRSWFFLTHIFPLALELEDSGYTSLTFSIPY-PERAELKFEGPNGLLREIDFELF 122
            C  LK SWFF + IFPLA  L+D GYTS +FSI   P  A+++F+GP  LL E+   L 
Sbjct: 64  FCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRLV 123

Query: 123 WSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQETILTS 182
           + H PL I +FDLS+F SMDS++FS L+ +YHMFD VHVTITS RV  SYS MQETIL+ 
Sbjct: 124 FCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILSP 183

Query: 183 QDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPLGLNSR 242
              QCIIGG+RAP++++F+ITL P E F+HIAS TKR+W FK CNS +GLITAPLGLN+R
Sbjct: 184 ---QCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNAR 243

Query: 243 LAAFFCDVFA 252
           L AFFCDVFA
Sbjct: 244 LVAFFCDVFA 250

[Close]

BLAST of Lsi09G016420 vs. NCBI nr
Match: gi|700191317|gb|KGN46521.1| (hypothetical protein Csa_6G106730 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 9.5e-82
Identity = 158/255 (61.96%), Postives = 195/255 (76.47%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           F   V+DM+ LID+  TLG+VD MADA FSP+ FCIMADS  SI++A G+QLWPPFFD +
Sbjct: 4   FRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDSF 63

Query: 63  VCNQLKRS-WFFLTHIFPLALELEDSGYTSLTFSIPYPER-----AELKFEGPNGLLREI 122
             + +++  WF LTH+F LA+EL +SGYTSLTFSI   ER     A+ KFEGPNGLLR++
Sbjct: 64  YSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRDV 123

Query: 123 DFELFWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQE 182
           +F L     PL I + DLS F SMDS EFS ++ EYHMFDYV V ITS RV+ SY+++QE
Sbjct: 124 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 183

Query: 183 TILTSQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPL 242
           TI+T +DGQC+IGGVRAPNQ+QF+IT++ P AF H AS +KRIWLFK  NSTKG+ITAPL
Sbjct: 184 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 243

Query: 243 GLNSRLAAFFCDVFA 252
           GL  RL +FFCDV A
Sbjct: 244 GLYGRLVSFFCDVTA 255

[Close]

BLAST of Lsi09G016420 vs. NCBI nr
Match: gi|778722070|ref|XP_011658399.1| (PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 9.5e-82
Identity = 158/255 (61.96%), Postives = 195/255 (76.47%), Query Frame = 1


Query: 3   FNFVVNDMRALIDAATTLGMVDRMADATFSPEMFCIMADSYPSINAAIGLQLWPPFFDHY 62
           F   V+DM+ LID+  TLG+VD MADA FSP+ FCIMADS  SI++A G+QLWPPFFD +
Sbjct: 4   FRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDSF 63

Query: 63  VCNQLKRS-WFFLTHIFPLALELEDSGYTSLTFSIPYPER-----AELKFEGPNGLLREI 122
             + +++  WF LTH+F LA+EL +SGYTSLTFSI   ER     A+ KFEGPNGLLR++
Sbjct: 64  YSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRDV 123

Query: 123 DFELFWSHNPLYIDEFDLSIFASMDSREFSYLVDEYHMFDYVHVTITSTRVTVSYSMMQE 182
           +F L     PL I + DLS F SMDS EFS ++ EYHMFDYV V ITS RV+ SY+++QE
Sbjct: 124 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 183

Query: 183 TILTSQDGQCIIGGVRAPNQIQFLITLNPPEAFHHIASLTKRIWLFKTCNSTKGLITAPL 242
           TI+T +DGQC+IGGVRAPNQ+QF+IT++ P AF H AS +KRIWLFK  NSTKG+ITAPL
Sbjct: 184 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPL 243

Query: 243 GLNSRLAAFFCDVFA 252
           GL  RL +FFCDV A
Sbjct: 244 GLYGRLVSFFCDVTA 255

The following BLAST results are available for this feature:

BLAST of Lsi09G016420 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G016420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIF2_CUCSA	9.2e-92	65.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1	[more]
A0A0A0KFM5_CUCSA	6.6e-82	61.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1	[more]
A0A0A0KA18_CUCSA	4.0e-79	60.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1	[more]
A0A0A0K7E0_CUCSA	1.3e-16	27.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1	[more]
A0A0A0K833_CUCSA	1.4e-15	40.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002320 PE=4 SV=1	[more]

BLAST of Lsi09G016420 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi09G016420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119586\|ref\|XP_008459734.1\|	8.6e-99	68.77	PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]	[more]
gi\|778686233\|ref\|XP_004146827.2\|	1.3e-91	65.60	PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]	[more]
gi\|778686236\|ref\|XP_011652354.1\|	1.4e-88	64.80	PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]	[more]
gi\|700191317\|gb\|KGN46521.1\|	9.5e-82	61.96	hypothetical protein Csa_6G106730 [Cucumis sativus]	[more]
gi\|778722070\|ref\|XP_011658399.1\|	9.5e-82	61.96	PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016420.1	Lsi09G016420.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G016420	Csa6G106730	Cucumber (Chinese Long) v2	culsiB398
Lsi09G016420	CSPI06G08380	Wild cucumber (PI 183967)	cpilsiB401
Lsi09G016420	Cucsa.120980	Cucumber (Gy14) v1	cgylsiB171
Lsi09G016420	CmoCh17G004700	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G016420	Cla006698	Watermelon (97103) v1	lsiwmB042
Lsi09G016420	Cla006680	Watermelon (97103) v1	lsiwmB036
Lsi09G016420	ClCG06G002890	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G016420	MELO3C035225.2	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G016420	Cla97C06G112280	Watermelon (97103) v2	lsiwmbB026
Lsi09G016420	Cla97C06G112070	Watermelon (97103) v2	lsiwmbB024
Lsi09G016420	Bhi12G001928	Wax gourd	lsiwgoB011
Lsi09G016420	Cp4.1LG12g04300	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G016420	CsGy6G008470	Cucumber (Gy14) v2	cgyblsiB364
Lsi09G016420	CsaV3_6G008760	Cucumber (Chinese Long) v3	cuclsiB422

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G016420	Cucumber (Gy14) v1	cgylsiB169
Lsi09G016420	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G016420	Cucurbita maxima (Rimu)	cmalsiB817
Lsi09G016420	Cucurbita moschata (Rifu)	cmolsiB803
Lsi09G016420	Cucurbita pepo (Zucchini)	cpelsiB248
Lsi09G016420	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G016420	Cucumber (Chinese Long) v2	culsiB402
Lsi09G016420	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G016420	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G016420	Silver-seed gourd	carlsiB545
Lsi09G016420	Silver-seed gourd	carlsiB820
Lsi09G016420	Cucumber (Chinese Long) v3	cuclsiB424