Cla006680 (gene) Watermelon (97103) v1

Overview
NameCla006680
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr6 : 3081247 .. 3083036 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTCAATTTCGTCGTCAACGATATGCACGCCCTCATAAACGCGGCCACCACATTGGGGATGGTGGATCAAATGGCGGATACAACATTCTCGCCGGAAATGCTTTGCATAATGGCGGATTCAAATATTTCCATTCACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGACCATTACTTCTGCAATGAGGCTCAGCGTTCTTGGTTTTTCCTCACCAACATTTTCCCTCTTGCCCTAGATTTACAAGATTCTGGTTACACTTCTTTGACCTTCTCTATCCCTTACCCCGAACGTGCCGAACTCAAATTCCAAGGCCCAAATGGTAATTTTGTTTTATTTCATTCCCTTACCTCCTCTTCTTTCAACAAATTCTTATTTCCATTCCTTTAATTTCTCTCTTAGGCCTTCTTCGCGAAATTGATTTCGAATTGGCTTATTCCCATGATCCTTTGTTCATCAGCGAATTTGATCTCTCCATTTTTGTTTCCATGGATTCTCAACAATTCTCCCACATTATCGCTGAATATCATATGTTTGATTACGGTAATATTTTTTGTTATTTCCTTTTACTAAATCTTTAATTTAGTCATAATTCTTTTTTTTTTTTTTTTAATTTTCTTGTATGAAAATTATAATTATTATTTAATCAATAGATAATGCTCGACTTGTGGCTTTTCTTTTTTTCTTTTTTTTTCTTTAATGCGACAGCAAGAGCTGATTAATGGACTTATAATGGGAAATTATGTCTCTTTTTGGTGTACAAGAATAATGGTATATATTAAATAAAACATTTTATTATCTTATTACTATTTTTCCTATTATATTTAAAAGAATATTCACATGTTTGAATTTTTTTACGTGAAAATTATTGTTATTATTATTATTATTATTATTTAATCAATTTCAGTAAAATATAAATATAATGGTATACTTGTGGCTTTTTTTCTTTAATGCAACAGCAAGAGATAATTAATGAAATTTAATGGAAAATTATGTCTCTCTCTCTTTTTCTTTTTTTTTTTTACAAGAATAATGGCCTATATTTTTTTAAAAAAAAATTGTTCATTTAACATTTTTACTATAAATTTTGAAATAACATTCACATATTGTATTTTGTTACATAAAAATTATTATTATTATTTAATCAATTTATGTAGATGTATCAAAATAAATAGACGAAAAATTTTAGCTTTAAATTTAAATTTAGGGAAATTCTTATAAGTGGAAAGAATATCAAACGTTACAAATATACAAAAATTTTATTGTCTATCGTGGTCTGTCGCTAATAGACAATGAATTTTTTTTATATTTATAAATGTTTTGACTCATTTTGTTATATTTGAAAACAACTTTATTATATATACATGTAAGTTAATTTAACTTTTTAATTGTGTATTATTATTATTTACAGTTCAAGTTACTGTAACAAGCACACGAGTGACATTCTCTTATGCAATTATGCAAGAGACAAGTCTTAGCCCACAGGTATTGTATATTAATTTTTGGAGGGTGTTACTTAATTAGTTAATGTAATATATGGTTTAAATTATTGTTAAATGTAGGATGGAGAATGCATAATTGGAGGTATTAGAGCACCAAATCAAATTCAATTCATGATCAATTTGAGTCCACCAGAAGCCTTCTATCATATCGCAAGCCAAACGAAGAGGATATGGTTCTTCAAAACTTGTAATTCCACCAAAGGTTTAATTACTGCCCCTCTTGGATTGAATGGTCGACTTGTTTCTTTTTTCTGTACTTCAGCACCAAGTGATTATTAG

mRNA sequence

ATGTCGTTCAATTTCGTCGTCAACGATATGCACGCCCTCATAAACGCGGCCACCACATTGGGGATGGTGGATCAAATGGCGGATACAACATTCTCGCCGGAAATGCTTTGCATAATGGCGGATTCAAATATTTCCATTCACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGACCATTACTTCTGCAATGAGGCTCAGCGTTCTTGGTTTTTCCTCACCAACATTTTCCCTCTTGCCCTAGATTTACAAGATTCTGGTTACACTTCTTTGACCTTCTCTATCCCTTACCCCGAACGTGCCGAACTCAAATTCCAAGGCCCAAATGGCCTTCTTCGCGAAATTGATTTCGAATTGGCTTATTCCCATGATCCTTTGTTCATCAGCGAATTTGATCTCTCCATTTTTGTTTCCATGGATTCTCAACAATTCTCCCACATTATCGCTGAATATCATATGTTTGATTACGTTCAAGTTACTGTAACAAGCACACGAGTGACATTCTCTTATGCAATTATGCAAGAGACAAGTCTTAGCCCACAGGATGGAGAATGCATAATTGGAGGTATTAGAGCACCAAATCAAATTCAATTCATGATCAATTTGAGTCCACCAGAAGCCTTCTATCATATCGCAAGCCAAACGAAGAGGATATGGTTCTTCAAAACTTGTAATTCCACCAAAGGTTTAATTACTGCCCCTCTTGGATTGAATGGTCGACTTGTTTCTTTTTTCTGTACTTCAGCACCAAGTGATTATTAG

Coding sequence (CDS)

ATGTCGTTCAATTTCGTCGTCAACGATATGCACGCCCTCATAAACGCGGCCACCACATTGGGGATGGTGGATCAAATGGCGGATACAACATTCTCGCCGGAAATGCTTTGCATAATGGCGGATTCAAATATTTCCATTCACGCCGCCATCGGCCTTCAACTCTGGCCTCCATTCTTTGACCATTACTTCTGCAATGAGGCTCAGCGTTCTTGGTTTTTCCTCACCAACATTTTCCCTCTTGCCCTAGATTTACAAGATTCTGGTTACACTTCTTTGACCTTCTCTATCCCTTACCCCGAACGTGCCGAACTCAAATTCCAAGGCCCAAATGGCCTTCTTCGCGAAATTGATTTCGAATTGGCTTATTCCCATGATCCTTTGTTCATCAGCGAATTTGATCTCTCCATTTTTGTTTCCATGGATTCTCAACAATTCTCCCACATTATCGCTGAATATCATATGTTTGATTACGTTCAAGTTACTGTAACAAGCACACGAGTGACATTCTCTTATGCAATTATGCAAGAGACAAGTCTTAGCCCACAGGATGGAGAATGCATAATTGGAGGTATTAGAGCACCAAATCAAATTCAATTCATGATCAATTTGAGTCCACCAGAAGCCTTCTATCATATCGCAAGCCAAACGAAGAGGATATGGTTCTTCAAAACTTGTAATTCCACCAAAGGTTTAATTACTGCCCCTCTTGGATTGAATGGTCGACTTGTTTCTTTTTTCTGTACTTCAGCACCAAGTGATTATTAG

Protein sequence

MSFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDHYFCNEAQRSWFFLTNIFPLALDLQDSGYTSLTFSIPYPERAELKFQGPNGLLREIDFELAYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSLSPQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGLNGRLVSFFCTSAPSDY
Homology
[Close]
BLAST of Cla006680 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.2e-92
Identity = 161/247 (65.18%), Postives = 198/247 (80.16%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SFNF+VN+M  L++A  TLG+ D   D TFSPEM C+MADSN+SIH+AIGLQLWPPFFDH
Sbjct: 3   SFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDH 62

Query: 62  YFCNEAQRSWFFLTNIFPLALDLQDSGYTSLTFSIPY-PERAELKFQGPNGLLREIDFEL 121
           YFC + + SWFF + IFPLA  L+D GYTS +FSI   P  A+++FQGP  LL E+   L
Sbjct: 63  YFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRL 122

Query: 122 AYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSLS 181
            + H PL I +FDLS+FVSMDSQQFS++I++YHMFD V VT+TS RV FSY+ MQET LS
Sbjct: 123 VFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILS 182

Query: 182 PQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGLNG 241
           PQ+G+CIIGG+RAP++++F+I L P E F HIASQTKR+WFFK CNS +GLITAPLGLN 
Sbjct: 183 PQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNA 242

Query: 242 RLVSFFC 248
           RLV+FFC
Sbjct: 243 RLVAFFC 249

[Close]
BLAST of Cla006680 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.1e-83
Identity = 156/252 (61.90%), Postives = 199/252 (78.97%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SF   V+DM  LI++  TLG+VD MAD  FSP+  CIMADS+ SIH+A G+QLWPPFFD 
Sbjct: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDS 62

Query: 62  YFCNEA-QRSWFFLTNIFPLALDLQDSGYTSLTFSIPYPER-----AELKFQGPNGLLRE 121
           ++ ++  Q  WF LT++F LA++L +SGYTSLTFSI   ER     A+ KF+GPNGLLR+
Sbjct: 63  FYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRD 122

Query: 122 IDFELAYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQ 181
           ++F L     PL I + DLS FVSMDS++FS+II+EYHMFDYV+V +TS RV+FSYAI+Q
Sbjct: 123 VNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQ 182

Query: 182 ETSLSPQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAP 241
           ET ++P+DG+C+IGG+RAPNQ+QF+I +S P AF+H ASQ+KRIW FK  NSTKG+ITAP
Sbjct: 183 ETIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAP 242

Query: 242 LGLNGRLVSFFC 248
           LGL GRLVSFFC
Sbjct: 243 LGLYGRLVSFFC 251

[Close]
BLAST of Cla006680 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.2e-80
Identity = 150/249 (60.24%), Postives = 193/249 (77.51%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SF   V+DM  LI++  TLG+VD MAD  FSP+M CI+ADS++S+ +A GLQLWPPFFD 
Sbjct: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDS 62

Query: 62  YFC-NEAQRSWFFLTNIFPLALDLQDSGYTSLTFSIPYPER--AELKFQGPNGLLREIDF 121
           ++  N  Q  WF LT++FPLAL+L +SG TSLTFSI       A+ KF+GPNGLLRE++F
Sbjct: 63  FYSDNLRQIFWFRLTHLFPLALELLESGCTSLTFSIERFRHNYAQFKFEGPNGLLREVNF 122

Query: 122 ELAYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETS 181
            L     PL I + DLS FV+MDSQ+FS+II++Y+MFDYV+V +TS RV+FS + +QET+
Sbjct: 123 RLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQETT 182

Query: 182 LSPQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGL 241
           +S +DG CI+GG+RAP Q+QF+I +S P AF+H ASQ+KRIW FK  NSTKG+ITAPLGL
Sbjct: 183 ISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGL 242

Query: 242 NGRLVSFFC 248
            GRLVSFFC
Sbjct: 243 YGRLVSFFC 251

[Close]
BLAST of Cla006680 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 71/246 (28.86%), Postives = 121/246 (49.19%), Query Frame = 1 

Query: 5   FVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDHYFC 64
           F + ++   ++A   L    + A+   SP M  ++   + ++   +  Q+ P FF+++F 
Sbjct: 2   FSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHH-NLELNVAFQMMPQFFNYFFS 61

Query: 65  NEAQRSWFFLTNIFPLALDLQDSGYTSLTFSI-PYPERAELKFQGPNG---LLREIDFEL 124
           N    S   +  +F     +++   TSL+F +    +R  LKF  P     L+R+     
Sbjct: 62  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 121

Query: 125 AYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSLS 184
           A   D   +   DL  FVS+DSQQF  ++     + +V+VT T + V FS  I +E   +
Sbjct: 122 AVKED---MGNIDLETFVSIDSQQFRRVVTGCRDY-FVRVTTTHSHVRFSNEI-KEFIFA 181

Query: 185 PQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGLNG 244
            + GECI+ G+      +F+I + P   FY+I  + KR+W FK+ +     I AP+GL  
Sbjct: 182 REGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFA 241

Query: 245 RLVSFF 247
           R V +F
Sbjct: 242 RFVIYF 241

[Close]
BLAST of Cla006680 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-14
Identity = 64/236 (27.12%), Postives = 112/236 (47.46%), Query Frame = 1 

Query: 5   FVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDHYFC 64
           F VN +  L+N    L  + +  D   SP  L +M   N S     GLQ+   FF+ Y  
Sbjct: 6   FRVNPLSGLLNPTPVLSHLGEEVDIRVSPLKLSLMLP-NFSPSFIAGLQMTHEFFNLYIS 65

Query: 65  NEAQRSWFFLTNIFPLALDLQDSGYTSLTFSIPYPERAE--LKFQGPNGLLREIDFELAY 124
           +   +  F L   +     ++  G++S+ F++         L F+  N        +L  
Sbjct: 66  DRTYQFRFSLRKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFENNNAKRERRRLKLL- 125

Query: 125 SHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSLSPQ 184
           ++D     + + + FVS+DS+ F  I +E +    V VT T++RV F +   +E + S +
Sbjct: 126 AYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRS-VSVTFTNSRVNF-FNKNKEITFSKE 185

Query: 185 DGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGL 239
           + +C+IGG+    + +F+I + P   F  ++SQ+KR+WF         ++  PLGL
Sbjct: 186 ENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQ-RDFSCIMILPLGL 236

[Close]
BLAST of Cla006680 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-100
Identity = 176/247 (71.26%), Postives = 207/247 (83.81%), Query Frame = 1 

Query: 1   MSFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFD 60
           MSFNFVVN+M  LI+A  TLG+ DQ+AD TFSPEM C+M DSN+SIH+ IGLQLWPPFFD
Sbjct: 1   MSFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFD 60

Query: 61  HYFCNEAQRSWFFLTNIFPLALDLQDSGYTSLTFSI-PYPERAELKFQGPNGLLREIDFE 120
           HYFC+E Q SWFF   IFPLA DLQDSGYTS +FSI P P+ A++KFQGPNGLL E +FE
Sbjct: 61  HYFCSELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGPNGLLHETNFE 120

Query: 121 LAYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSL 180
           L YSH PL I +FDLS+FVSMDSQ+FS++I++YHMFD V VT+TS RV FSY+IMQET L
Sbjct: 121 LVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETIL 180

Query: 181 SPQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGLN 240
           + Q+G+CIIGGI+APNQ+QF++ L P E F HIASQTKR+WFFK CNS KGLITAPLGLN
Sbjct: 181 NQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLN 240

Query: 241 GRLVSFF 247
            RLV+ F
Sbjct: 241 SRLVACF 247

[Close]
BLAST of Cla006680 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 4.6e-92
Identity = 161/247 (65.18%), Postives = 198/247 (80.16%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SFNF+VN+M  L++A  TLG+ D   D TFSPEM C+MADSN+SIH+AIGLQLWPPFFDH
Sbjct: 3   SFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDH 62

Query: 62  YFCNEAQRSWFFLTNIFPLALDLQDSGYTSLTFSIPY-PERAELKFQGPNGLLREIDFEL 121
           YFC + + SWFF + IFPLA  L+D GYTS +FSI   P  A+++FQGP  LL E+   L
Sbjct: 63  YFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRL 122

Query: 122 AYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSLS 181
            + H PL I +FDLS+FVSMDSQQFS++I++YHMFD V VT+TS RV FSY+ MQET LS
Sbjct: 123 VFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILS 182

Query: 182 PQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGLNG 241
           PQ+G+CIIGG+RAP++++F+I L P E F HIASQTKR+WFFK CNS +GLITAPLGLN 
Sbjct: 183 PQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNA 242

Query: 242 RLVSFFC 248
           RLV+FFC
Sbjct: 243 RLVAFFC 249

[Close]
BLAST of Cla006680 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 2.1e-89
Identity = 160/247 (64.78%), Postives = 195/247 (78.95%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SFNF+VN+M  L++A  TLG+ D   D TFSPEM C+MADSN+SIH+AIGLQLWPPFFDH
Sbjct: 3   SFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDH 62

Query: 62  YFCNEAQRSWFFLTNIFPLALDLQDSGYTSLTFSIPY-PERAELKFQGPNGLLREIDFEL 121
           YFC + + SWFF + IFPLA  L+D GYTS +FSI   P  A+++FQGP  LL E+   L
Sbjct: 63  YFCRDLKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLRL 122

Query: 122 AYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQETSLS 181
            + H PL I +FDLS+FVSMDSQQFS++I++YHMFD V VT+TS RV FSY+ MQET LS
Sbjct: 123 VFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILS 182

Query: 182 PQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAPLGLNG 241
           PQ   CIIGG+RAP++++F+I L P E F HIASQTKR+WFFK CNS +GLITAPLGLN 
Sbjct: 183 PQ---CIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNA 242

Query: 242 RLVSFFC 248
           RLV+FFC
Sbjct: 243 RLVAFFC 246

[Close]
BLAST of Cla006680 vs. NCBI nr
Match: gi|700191317|gb|KGN46521.1| (hypothetical protein Csa_6G106730 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 3.0e-83
Identity = 156/252 (61.90%), Postives = 199/252 (78.97%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SF   V+DM  LI++  TLG+VD MAD  FSP+  CIMADS+ SIH+A G+QLWPPFFD 
Sbjct: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDS 62

Query: 62  YFCNEA-QRSWFFLTNIFPLALDLQDSGYTSLTFSIPYPER-----AELKFQGPNGLLRE 121
           ++ ++  Q  WF LT++F LA++L +SGYTSLTFSI   ER     A+ KF+GPNGLLR+
Sbjct: 63  FYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRD 122

Query: 122 IDFELAYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQ 181
           ++F L     PL I + DLS FVSMDS++FS+II+EYHMFDYV+V +TS RV+FSYAI+Q
Sbjct: 123 VNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQ 182

Query: 182 ETSLSPQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAP 241
           ET ++P+DG+C+IGG+RAPNQ+QF+I +S P AF+H ASQ+KRIW FK  NSTKG+ITAP
Sbjct: 183 ETIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAP 242

Query: 242 LGLNGRLVSFFC 248
           LGL GRLVSFFC
Sbjct: 243 LGLYGRLVSFFC 251

[Close]
BLAST of Cla006680 vs. NCBI nr
Match: gi|778722070|ref|XP_011658399.1| (PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 3.0e-83
Identity = 156/252 (61.90%), Postives = 199/252 (78.97%), Query Frame = 1 

Query: 2   SFNFVVNDMHALINAATTLGMVDQMADTTFSPEMLCIMADSNISIHAAIGLQLWPPFFDH 61
           SF   V+DM  LI++  TLG+VD MAD  FSP+  CIMADS+ SIH+A G+QLWPPFFD 
Sbjct: 3   SFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDS 62

Query: 62  YFCNEA-QRSWFFLTNIFPLALDLQDSGYTSLTFSIPYPER-----AELKFQGPNGLLRE 121
           ++ ++  Q  WF LT++F LA++L +SGYTSLTFSI   ER     A+ KF+GPNGLLR+
Sbjct: 63  FYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSI---ERFRYNYAQFKFEGPNGLLRD 122

Query: 122 IDFELAYSHDPLFISEFDLSIFVSMDSQQFSHIIAEYHMFDYVQVTVTSTRVTFSYAIMQ 181
           ++F L     PL I + DLS FVSMDS++FS+II+EYHMFDYV+V +TS RV+FSYAI+Q
Sbjct: 123 VNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQ 182

Query: 182 ETSLSPQDGECIIGGIRAPNQIQFMINLSPPEAFYHIASQTKRIWFFKTCNSTKGLITAP 241
           ET ++P+DG+C+IGG+RAPNQ+QF+I +S P AF+H ASQ+KRIW FK  NSTKG+ITAP
Sbjct: 183 ETIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAP 242

Query: 242 LGLNGRLVSFFC 248
           LGL GRLVSFFC
Sbjct: 243 LGLYGRLVSFFC 251

The following BLAST results are available for this feature:
BLAST of Cla006680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIF2_CUCSA3.2e-9265.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1[more]
A0A0A0KFM5_CUCSA2.1e-8361.90Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1[more]
A0A0A0KA18_CUCSA8.2e-8060.24Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1[more]
A0A0A0K7E0_CUCSA1.1e-2028.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1[more]
A0A0A0K9W8_CUCSA1.6e-1427.12Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1[more]
BLAST of Cla006680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119586|ref|XP_008459734.1|1.2e-10071.26PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo][more]
gi|778686233|ref|XP_004146827.2|4.6e-9265.18PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus][more]
gi|778686236|ref|XP_011652354.1|2.1e-8964.78PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus][more]
gi|700191317|gb|KGN46521.1|3.0e-8361.90hypothetical protein Csa_6G106730 [Cucumis sativus][more]
gi|778722070|ref|XP_011658399.1|3.0e-8361.90PREDICTED: uncharacterized protein LOC105435987 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla006680Cla006680.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.70.10.10coord: 47..172
score: 4.