Lsi09G010320 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi09G010320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRegulator of Vps4 activity in the MVB pathway protein
Locationchr09 : 15002536 .. 15006807 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATTGGTTTAAATTGTGATCCCTCTAAAGTTGACTCTTGGGGTCTTTGGTGGGTTGTGAGGTTAGCCAAATCCCTTGTTCATATTTGGGGCTTCTCCTAGGAGGCAATCCTAGAAATGTGTCATTTTGAAACCCTGTGGTGTAAACAGTACAAAGGAGGCTCTCGTTTTTTTTTTGGGAGGATTGGTGAGTGGGAGTCGAGCCTTGTTGTGCGTTATTTTCACATCTTTATCATTTGTCTAAGAAGAGGTTGTCGTCAGTTGCCTCTATTTTTGTCAACGTCTTGAGTCGTCTCCCTCTATCTCTTTGAATCTTTGTTGTCCTTTGACTTATTGCGAGTCTTTGGAGGTGGTGGTATTCTCTCTCCTAATTCTATTCTAGGTAGAAGTGACTTGTGCATTTGGGACCCTAATCCTTTTAACGGGTTCTTTTCTTGTTCGCTTTTCATCCTCCCTTCACTCATTCAGAGACCTTAGTTTTTGAGATAACATATCATGTAGTTTGACAGTAGATTTTGTACTGAATAGGAAGTCTATTGTCGTCACATCTCATCCTAGGCTTAGTAGGGTAGTTTGGGGCAGGGTGGGAAAGTTTTCTCCTCTTTGTGGAAGGTTAAAGTTCTTAAGAAAGTTTGTTTGTTTTTTTTTTTCCTTGTCAAGTTATACATGGTAGAGTAAACACCCAGGATTGTATCCAGGGGCACACTACCTTGGTTTGCACTCATAGTGGTGCACTTTTTAGACAGCAGAGGAGGATCCTGATCATCTTTTGTGGTACTATTAGTTAGTCTCTGTGGAGCCCATGCTTTAGTTTGTGGGTTGATGTGATTCGTAATTTGGATTGCCAGTCTTTCTCCGAAGAGATTGCGGTGAATCCTGTTTCATGATTAGGGGAGGATCTTGTGGCAAGTTCGTTATTTTGCTATCTTGTGGGGAGTGTGGATTGAGAGAGACAGTGGGATTCGTAGAGGGCTAGGGATCTTTGGATTTAGTTTGGGAGGGGGTGAGGTCTAATGCCTCGTTATGTGCATTTGTTTGTGGGGTTTTTGTAATTATCTGCTTAGCTATCAATTTTTGGGTTGGAGCTTGTTCTCGTACGTAGCAGAGGGCTTTTTTTTAATTTTTTTTAATTTTAATAACCTTGTATATTCTTTCATTTTTTTTTTTCAATTAAAGCTTGTTTCTTACCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGGAAAAAAACCGGACCATTTTGGAGCCCTTTTATATAAATGTTCTTACTTTGTGCTTTTTGTCTGTCCGTAGTTAACTACTAAATTTACCATAACAGAGAATGTCCAGTTGAACTACGAGAGGCTATTGCGAGCATAATATTTGCTGCTCCTAGATGTTCTGACCTCCCAGATTTACTTCAGCTGAAGAATTTGTTTGCAGTGAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGATTCTGGTGTTAACCGATCAGTTGAGTGTATCTCAAGTTTAATCATGAGCAGTACTATCTTGTTTTTTGAGAATAAAAAGGATATCATTCGTTTACTACTTTGTTTTCATTTCAGATTATTGAAAAGCTTTCAGTGAGTGCTCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCACAAGAACATGGACTCCACTGGGATTCTTCCAGCACTGCATCTGAATTTAGTAAAACCCACGAAGATCTGCTGGTATGATTGCATACTTGAATTTTACTTGTTCCTGAAAACTCTCTGATTTTTGTGACATTTACAAAGAACCTTGTTGATCACTTTAAGCACAACCCTATAGTTGATATTCGATTCATAATACTGTAGTGGAGTTATAAATGGTTTATGTTCTTGCTTCTGGAAACACTTTGGGCTATTCTACTGACTGCATAATTCTCCATCCTTCCCGTTACATCTTGGCTTGATTTGAATTGGAAAATGCTTGTATCTCAATGAAAATGGTTATGAGATTCTAGGATTTGTAGAAGTCGCGAGCTCTTCCTTCTCCAGGGGTCCCCTCCATATTTTGTGACCAAAATTCTGTTGCCCACCACCCTGTTCCTATCAATAACTGTTGAACCCTTACAAATTGCCAACATACTCAGAAACAGTATTCAGTAAGACTAACAGGCTAACAGACTTGTTTACTTAACTAGATTACAACTTCAGATAAAGATTTTTGTTCCCTCTGCTGAAAATGCACTTTAATACCTTCAAGTTAAAGTTTACATTTCGACAATATTTGTGGCTCGCTATTAGCACTCATAGTTGTGATAAACTAATCTATTTTTGTGAGAAGTGAGAACTAAATCTTCTGCTAACGTTAGGGATACTTTTAGTTTAATGTGGAGTTTGAGCCCCTTATTTTTACTTATTTATCTGTTTTTAGGTTTTGATATTTCACAGTTTAATTGATCTTGAGTTTTTAGATTGTTAAATTACATTGAATTATTGTCTCCGTTCGGTAATCATTTGGTTTTTGAAAATTAAGCCTATAAACACCACTTCTATTTATTGGTTTATATGTAAGTCTACATTTTAGGAGTGTTCTCAAAATCAAAGCCAAAATTTGAAAACTAAAAAAAGTAGTTTTTGTTTTTGAAAATTGTCTAAGAATTCAAATGTTTATATAGGAAGTATGAAAACTATTAGTAAGAAATTGTGAGAAAACAAGCACAAATTTTAAAAAGAAAAACTAAATACCAAGGTCCCGTTTGGTAACTATTTTGTTTATGGTTTTTGAAAATTGTGTATTTCCTCTCATTTTCTTACAATGGTTTGCATCTTTCAAAGTTGAATTCTTAGCCAAATTCCAAAACCAAATGCAAGTTCTATAAAACTAGTTTTTTAAGTTTTCAAAATTTGATTTGGTTTTTGAAAACATTGGTAAAAAGTTGAGAATAAGGCAAAAAAATTTAGAGGTGGAATGAGTGTTTGTAGGCTTAATTTTCAAAAACTAAATGGTTACCAAATGGGGTCAAAATGATCACCAAGGGACCTTATTGATTGGTTTGTCAGTAGTTATTTATTTAGTTTTGACGAGGTAACATTCACAACTTATTTGATTTAAAGTTTAAATGGATAAAACTGAAAGTTGAATATTAAAACTGACAAGTTGAGCAAAGTAGAAGGGTAAAAAGTGATCTTTTTGACATAAAGAAACTCTGAATACAATCCCTTAGGTTTGAGCTTGTTAATTTTCTCCCAGAGGACTTCTAGTTGATTAGCCAGCCAATTAAGAGAGATGAACTGTGGATGTTTTTATGAACATTAAAGGAAGGAGATTCTCCCCCTCTATTAAGCTTGTAAATTTATGGGCTTATCTCTGTCTCTCTTATATGGAGCTGTTATGTGATTTGCTACAAGCACTGGAGTGAGTTTGTTATAGTTAACTTATTCTGTTTTCGATTGTCCATCATGTGGCCTTTTTTATGCAGGGTGGACCCAAGGTAGTACAAGGAGCAGCAGCCTCTCAAACTCCTCAACACAGCTCTTCGAATTCTTCCATTCCTTATGCACATCCCGCCGTGTCTCCCATGGGAAGGCAAGAACCCGAATGCCACCATACATTCAGCCCAATTAGCAATAGTACAAACGAAATCAAACCAGGACCTAAAAAGTTTGATGTCAAACCAGAAGTTGCTGCTAAATTAGATACAAGACCACCTCCATCCGACGTATTAGAGAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCCGAGCTAGCAAATGTCAACCTTGGAGCAATGAAGTTTGAAGGAGGACAAACTTCGGAGTGCTGAAGACAAAAAGAAAGGTAATTTACACATTTGTTTGATACTGGACTCGTGCATAAAGTCTCTGTTTGAACTGTCCTAAAAGCTTGAAGAGTGACGAGTCAATCCACAAGTGGAAGCGAACCAAATCTATGTAATTAATACAGTTCAAGTAAAATTTATTTGTAAAATACTGAAGTTCTTATTTCACGAAACCTCACCTATGGTGATGTTGGTCAAGTTCTAATGGTGCAGCAGTTTGATATAAATGCCACATTAGAAGAAAACTAAGTTTGCTCTAAAATATGAGCAATGTTCTTCCTTCACATATGAGCATGCATGCTTCCTTTGCTTCTGTTTGGTAAATGTTCATATTTTTCATTTTATAAACCTTTTCAAAAAGGTACAATGTACTTTTGATTTAAAAGATTTAAGGTAAGTGTCTATTTAGTCTTTGAAATTTT

mRNA sequence

ATGATTATTGGTTTAAATTGTGATCCCTCTAAAGTTGACTCTTGGGGTCTTTGGTGGGTTGTGAGAGAATGTCCAGTTGAACTACGAGAGGCTATTGCGAGCATAATATTTGCTGCTCCTAGATGTTCTGACCTCCCAGATTTACTTCAGCTGAAGAATTTGTTTGCAGTGAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGATTCTGGTGTTAACCGATCAATTATTGAAAAGCTTTCAGTGAGTGCTCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCACAAGAACATGGACTCCACTGGGATTCTTCCAGCACTGCATCTGAATTTAGTAAAACCCACGAAGATCTGCTGGGTGGACCCAAGGTAGTACAAGGAGCAGCAGCCTCTCAAACTCCTCAACACAGCTCTTCGAATTCTTCCATTCCTTATGCACATCCCGCCGTGTCTCCCATGGGAAGGCAAGAACCCGAATGCCACCATACATTCAGCCCAATTAGCAATAGTACAAACGAAATCAAACCAGGACCTAAAAAGTTTGATGTCAAACCAGAAGTTGCTGCTAAATTAGATACAAGACCACCTCCATCCGACGTATTAGAGAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCCGAGCTAGCAAATGTCAACCTTGGAGCAATGAAGTTTGAAGGAGGACAAACTTCGGAGTGCTGAAGACAAAAAGAAAGGTAATTTACACATTTGTTTGATACTGGACTCGTGCATAAAGTCTCTGTTTGAACTGTCCTAAAAGCTTGAAGAGTGACGAGTCAATCCACAAGTGGAAGCGAACCAAATCTATGTAATTAATACAGTTCAAGTAAAATTTATTTGTAAAATACTGAAGTTCTTATTTCACGAAACCTCACCTATGGTGATGTTGGTCAAGTTCTAATGGTGCAGCAGTTTGATATAAATGCCACATTAGAAGAAAACTAAGTTTGCTCTAAAATATGAGCAATGTTCTTCCTTCACATATGAGCATGCATGCTTCCTTTGCTTCTGTTTGGTAAATGTTCATATTTTTCATTTTATAAACCTTTTCAAAAAGGTACAATGTACTTTTGATTTAAAAGATTTAAGGTAAGTGTCTATTTAGTCTTTGAAATTTT

Coding sequence (CDS)

ATGATTATTGGTTTAAATTGTGATCCCTCTAAAGTTGACTCTTGGGGTCTTTGGTGGGTTGTGAGAGAATGTCCAGTTGAACTACGAGAGGCTATTGCGAGCATAATATTTGCTGCTCCTAGATGTTCTGACCTCCCAGATTTACTTCAGCTGAAGAATTTGTTTGCAGTGAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGATTCTGGTGTTAACCGATCAATTATTGAAAAGCTTTCAGTGAGTGCTCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCACAAGAACATGGACTCCACTGGGATTCTTCCAGCACTGCATCTGAATTTAGTAAAACCCACGAAGATCTGCTGGGTGGACCCAAGGTAGTACAAGGAGCAGCAGCCTCTCAAACTCCTCAACACAGCTCTTCGAATTCTTCCATTCCTTATGCACATCCCGCCGTGTCTCCCATGGGAAGGCAAGAACCCGAATGCCACCATACATTCAGCCCAATTAGCAATAGTACAAACGAAATCAAACCAGGACCTAAAAAGTTTGATGTCAAACCAGAAGTTGCTGCTAAATTAGATACAAGACCACCTCCATCCGACGTATTAGAGAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCCGAGCTAGCAAATGTCAACCTTGGAGCAATGAAGTTTGAAGGAGGACAAACTTCGGAGTGCTGA

Protein sequence

MIIGLNCDPSKVDSWGLWWVVRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSIIEKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQTPQHSSSNSSIPYAHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEGGQTSEC
BLAST of Lsi09G010320 vs. TrEMBL
Match: A0A0A0KMU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G367190 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.7e-101
Identity = 204/230 (88.70%), Postives = 211/230 (91.74%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII
Sbjct: 96  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQTP 141
           EKLSVSAPPGELKLKVMKEIA+EHGL+WDSSSTASEFSKTHEDLLGGPK VQG+A SQTP
Sbjct: 156 EKLSVSAPPGELKLKVMKEIAKEHGLNWDSSSTASEFSKTHEDLLGGPKGVQGSAVSQTP 215

Query: 142 QHSSSNSSIPY--AHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKLD 201
           QH S N SI +  AH A SPMG++EPE HH   PIS +TNEIKP PK FDVKPEVAAKLD
Sbjct: 216 QH-SLNPSISHVSAHLAASPMGKKEPEHHHAVGPISYNTNEIKPEPKSFDVKPEVAAKLD 275

Query: 202 TRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEGGQTSEC 250
           TR PPSDVLEKAKAAIASAERATAAARVAAELANVNLG MKFEGGQTSEC
Sbjct: 276 TR-PPSDVLEKAKAAIASAERATAAARVAAELANVNLGTMKFEGGQTSEC 323

BLAST of Lsi09G010320 vs. TrEMBL
Match: I1NFJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G116300 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60
Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAIASIIFAAPRCSD+PDLL +KNLF  KYGKEFVSA+SELRPDSGVNR+II
Sbjct: 96  RECPTELREAIASIIFAAPRCSDVPDLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQ-GAAASQT 141
           EKLSVSAP GE+KLKV++EIA+E+ + WDSS T +EF K HEDLLGG K V  GA  S T
Sbjct: 156 EKLSVSAPSGEVKLKVLREIAEEYNIAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHT 215

Query: 142 PQHSSSNSSIP-YAHPAVSPM-GRQEPECHHTFSPISNS----TNEIKPGPKKFDVKPEV 201
           P  + SN+  P    P++ P+  +QE +     SP +N+    TNEI+   K  +V P  
Sbjct: 216 PSRNGSNNPSPCITEPSIKPVQDKQEYKHLEAPSPSNNNSSLDTNEIEQSHKNNNV-PAG 275

Query: 202 AAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEG 244
            AK +TR   SDVLEKA+AAIASA+RA+AAAR AA L   N G++K EG
Sbjct: 276 DAKSETRFQSSDVLEKARAAIASADRASAAARAAAALVQSNFGSLKLEG 323

BLAST of Lsi09G010320 vs. TrEMBL
Match: A0A0B2PUJ2_GLYSO (IST1 like OS=Glycine soja GN=glysoja_015308 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60
Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAIASIIFAAPRCSD+PDLL +KNLF  KYGKEFVSA+SELRPDSGVNR+II
Sbjct: 96  RECPTELREAIASIIFAAPRCSDVPDLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQ-GAAASQT 141
           EKLSVSAP GE+KLKV++EIA+E+ + WDSS T +EF K HEDLLGG K V  GA  S T
Sbjct: 156 EKLSVSAPSGEVKLKVLREIAEEYNIAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHT 215

Query: 142 PQHSSSNSSIP-YAHPAVSPM-GRQEPECHHTFSPISNS----TNEIKPGPKKFDVKPEV 201
           P  + SN+  P    P++ P+  +QE +     SP +N+    TNEI+   K  +V P  
Sbjct: 216 PSRNGSNNPSPCITEPSIKPVQDKQEYKHLEAPSPSNNNSSLDTNEIEQSHKNNNV-PAG 275

Query: 202 AAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEG 244
            AK +TR   SDVLEKA+AAIASA+RA+AAAR AA L   N G++K EG
Sbjct: 276 DAKSETRFQSSDVLEKARAAIASADRASAAARAAAALVQSNFGSLKLEG 323

BLAST of Lsi09G010320 vs. TrEMBL
Match: I1NFJ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G116300 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60
Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAIASIIFAAPRCSD+PDLL +KNLF  KYGKEFVSA+SELRPDSGVNR+II
Sbjct: 60  RECPTELREAIASIIFAAPRCSDVPDLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTII 119

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQ-GAAASQT 141
           EKLSVSAP GE+KLKV++EIA+E+ + WDSS T +EF K HEDLLGG K V  GA  S T
Sbjct: 120 EKLSVSAPSGEVKLKVLREIAEEYNIAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHT 179

Query: 142 PQHSSSNSSIP-YAHPAVSPM-GRQEPECHHTFSPISNS----TNEIKPGPKKFDVKPEV 201
           P  + SN+  P    P++ P+  +QE +     SP +N+    TNEI+   K  +V P  
Sbjct: 180 PSRNGSNNPSPCITEPSIKPVQDKQEYKHLEAPSPSNNNSSLDTNEIEQSHKNNNV-PAG 239

Query: 202 AAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEG 244
            AK +TR   SDVLEKA+AAIASA+RA+AAAR AA L   N G++K EG
Sbjct: 240 DAKSETRFQSSDVLEKARAAIASADRASAAARAAAALVQSNFGSLKLEG 287

BLAST of Lsi09G010320 vs. TrEMBL
Match: M5XDF0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008869mg PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.3e-58
Identity = 136/217 (62.67%), Postives = 162/217 (74.65%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAI+SIIFA+PRCS++PDLLQ+KNLF  KYGKEFVSA SELRPDSGVNR+II
Sbjct: 96  RECPPELREAISSIIFASPRCSEVPDLLQIKNLFTAKYGKEFVSAASELRPDSGVNRTII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAA-SQT 141
           EKLSVSAP GE +L+V+KEIAQE+ L+WDSS+T +EFSKTHEDLLGG K V G AA SQ 
Sbjct: 156 EKLSVSAPSGEARLRVLKEIAQEYNLNWDSSNTEAEFSKTHEDLLGGSKHVSGGAAPSQA 215

Query: 142 PQHSSSNSSIPY--AHPAVSPMGRQEPECHHTFSPI----SNSTNEIKPGPKKFDVKPEV 201
           P    S SS P   AH  V+   +QEP+  H   P+    ++ TNEI+P           
Sbjct: 216 PAKQGSFSSSPSNGAHSIVAADIKQEPKYLHAPRPLRETHTSYTNEIQPSINDDKAAAVS 275

Query: 202 AAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAEL 232
             K +TRP  S++LE+A+AAIASAERA+AAAR AAEL
Sbjct: 276 DTKRETRPKSSEILERARAAIASAERASAAARSAAEL 312

BLAST of Lsi09G010320 vs. TAIR10
Match: AT1G25420.1 (AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-51
Identity = 116/220 (52.73%), Postives = 149/220 (67.73%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           +ECP ELREAIASIIFAAPRCS++PDLLQ+KNLF  KYGKEF+   SELRPDSGVNR+II
Sbjct: 96  KECPRELREAIASIIFAAPRCSEVPDLLQIKNLFGTKYGKEFIMVASELRPDSGVNRTII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVV---QGAAAS 141
           EKLS ++P G  +LK++KEIAQE+ L+WDSS+T +EF K+HEDLLGG K +    G + S
Sbjct: 156 EKLSPTSPSGAARLKMLKEIAQEYSLNWDSSATEAEFMKSHEDLLGGAKQIHRQDGISES 215

Query: 142 QTPQHSSSNSSIPYAHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKL 201
           +  Q     SS+     ++     Q  +     +P+S S    K       +     A  
Sbjct: 216 RPSQQGYGQSSVSREVESLPAEATQRFQKLQAQNPVSKSMPSSK-------LTSAFQAPP 275

Query: 202 DTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGA 239
           DTR   +DV+E A+AA+ASA+RATAAAR AA+L NV+ GA
Sbjct: 276 DTRRNQTDVMEIARAALASADRATAAARAAAQLVNVSYGA 308

BLAST of Lsi09G010320 vs. TAIR10
Match: AT1G34220.1 (AT1G34220.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNR--- 81
           RECP++L+EAI+S+ FAAPRCSDL +L Q++ LF  KYGKEFV+A SEL+PDSGVNR   
Sbjct: 96  RECPLDLKEAISSVCFAAPRCSDLTELQQVQILFVSKYGKEFVAAASELKPDSGVNRKTE 155

Query: 82  --------SIIEK-------------------LSVSAPPGELKLKVMKEIAQEHGLHWDS 141
                   S++E                    LSV AP  E KLK++KEIA+EH L WD 
Sbjct: 156 SLIFIAWFSLVETRDLFMFLYFSNSILQLVELLSVRAPSPETKLKLLKEIAEEHELDWDP 215

Query: 142 SSTASEFSKTHEDLLGGPKVVQGAAASQTPQHSSSNSSI 151
           +ST ++  K+HEDLL GPK   G +    P+  +  +++
Sbjct: 216 ASTETDLFKSHEDLLDGPKQFGGGSKLPLPEEQNEKTNL 254

BLAST of Lsi09G010320 vs. TAIR10
Match: AT4G35730.1 (AT4G35730.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30
Identity = 85/211 (40.28%), Postives = 118/211 (55.92%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           ++CPV+L+E IAS+IFAAPRCS++P+L  L+++FA KYGK+FVSA ++LRP  GVNR +I
Sbjct: 110 KQCPVDLKEGIASLIFAAPRCSEIPELGDLRDIFAKKYGKDFVSAATDLRPSCGVNRMLI 169

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQTP 141
           +KLSV  P GE KLK+MKEIA+E  + WD++ T  E  K  E+ + GP+    A      
Sbjct: 170 DKLSVRNPGGEYKLKIMKEIAKEFQVDWDTTETEQELLKPQEESIDGPRKFVSA------ 229

Query: 142 QHSSSNSSIPYAHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKLDTR 201
                 SS+P    A++     EP       P S S+  I                    
Sbjct: 230 ------SSLPVNRAAIN-----EPIDPTKAVPRSTSSMSI-------------------N 284

Query: 202 PPPSDVLEKAKAAIASAERATAAARVAAELA 233
               D    A+AA   A++A AAA+VA+ LA
Sbjct: 290 THYHDTESAAEAATELAKQAVAAAQVASLLA 284

BLAST of Lsi09G010320 vs. TAIR10
Match: AT2G19710.1 (AT2G19710.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 112.1 bits (279), Expect = 5.0e-25
Identity = 87/266 (32.71%), Postives = 129/266 (48.50%), Query Frame = 1

Query: 2   IIGLNCDPSKVDSWGLWWVVRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGK 61
           +IG+ C+   V   G+    + CP++L+EA+ S++FA+ R SD+P+L ++   F  KYGK
Sbjct: 74  LIGIYCELLVV-RLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTTKYGK 133

Query: 62  EFVSAISELRPDSGVNRSIIEKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKT 121
           +F ++  ELRPDSGV+R ++EKLS  AP G  K+K++  IA+EH + W++ S      K 
Sbjct: 134 DFSTSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEHNVVWEAQSFVESDPKD 193

Query: 122 HEDLLGGPKVVQGAAASQTPQHSSSNSSIP--YAHPAVSPMGRQEPECHHT-------FS 181
            E LL G    Q A++       +SN   P     PA         E HH+         
Sbjct: 194 TE-LLNGANSFQPASSMNMDSSINSNKEQPPNIHAPATVNAHHGSSERHHSPENSYANGG 253

Query: 182 PISNSTNEIKPGPKKFDVKPEVAAKLDTRPPPS-------------------------DV 234
             S+ +N +  G K  D     A    +RP                            D 
Sbjct: 254 RSSSRSNNVTSG-KADDYYHSKARPSRSRPDEGECRNPNHGYENSSSRNKQKWEPEFVDS 313

BLAST of Lsi09G010320 vs. TAIR10
Match: AT4G29440.1 (AT4G29440.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 77/252 (30.56%), Postives = 121/252 (48.02%), Query Frame = 1

Query: 2   IIGLNCDPSKVDSWGLWWVVRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGK 61
           ++G+ C+   V   G+    + CP +L+EA+AS+++A+ R +D+ +L  +   F+ KYGK
Sbjct: 74  LVGIYCE-LLVARLGVIDSQKTCPNDLKEAVASVLYASQRLTDVGELSDIVKHFSAKYGK 133

Query: 62  EFVSAISELRPDSGVNRSIIEKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKT 121
           +FVSA   L+PDSGV+R ++EKLSV AP G  K+K++ EIA +H + W++ S      K 
Sbjct: 134 DFVSAAIGLQPDSGVSRLLVEKLSVKAPDGPTKIKILTEIATQHNVTWEAESLVESDPKE 193

Query: 122 HEDLLGGPKVVQGAAASQTPQHSSSNSSIPYAHPAVSPM----------GRQEPECHHTF 181
                G    V   A     + S   ++ P    A + +          GR       T 
Sbjct: 194 TMSASGASSSVSQPATGIKSESSRIQNNQPPVFQAAATVNVSQNSYATDGRSSSRMTSTD 253

Query: 182 SPISNSTNEIKPGPKKFDVKPEVAAKLDTRPPPS----------DVLEKAKAAIASAERA 234
             +  + +     PK    + +     D  P             D    A+AA  SAERA
Sbjct: 254 FNVGKTPDHYHQDPKPSGDRVDGREHRDHNPGHGDTSPFETKFVDATSAARAAAESAERA 313

BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|659131631|ref|XP_008465781.1| (PREDICTED: IST1 homolog [Cucumis melo])

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-102
Identity = 203/230 (88.26%), Postives = 210/230 (91.30%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII
Sbjct: 96  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQTP 141
           EKLSVSAPPGELKLKVMKEIA++HGL+WDSSST SEFSKTHEDLLGGPK VQGAA SQTP
Sbjct: 156 EKLSVSAPPGELKLKVMKEIAKQHGLNWDSSSTVSEFSKTHEDLLGGPKGVQGAAVSQTP 215

Query: 142 QHSSSNSSIPY--AHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKLD 201
           QHS  N SI Y  A  A SPMG++EPE HH   PI+ +TNEIKP PK FDVKPEVAAKLD
Sbjct: 216 QHSFLNPSISYGSALLAASPMGKKEPEHHHAVGPINYNTNEIKPEPKSFDVKPEVAAKLD 275

Query: 202 TRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEGGQTSEC 250
           TRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLG MKFEGGQTSEC
Sbjct: 276 TRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGTMKFEGGQTSEC 325

BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|449445148|ref|XP_004140335.1| (PREDICTED: IST1 homolog [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 5.3e-101
Identity = 204/230 (88.70%), Postives = 211/230 (91.74%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII
Sbjct: 96  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQTP 141
           EKLSVSAPPGELKLKVMKEIA+EHGL+WDSSSTASEFSKTHEDLLGGPK VQG+A SQTP
Sbjct: 156 EKLSVSAPPGELKLKVMKEIAKEHGLNWDSSSTASEFSKTHEDLLGGPKGVQGSAVSQTP 215

Query: 142 QHSSSNSSIPY--AHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKLD 201
           QH S N SI +  AH A SPMG++EPE HH   PIS +TNEIKP PK FDVKPEVAAKLD
Sbjct: 216 QH-SLNPSISHVSAHLAASPMGKKEPEHHHAVGPISYNTNEIKPEPKSFDVKPEVAAKLD 275

Query: 202 TRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEGGQTSEC 250
           TR PPSDVLEKAKAAIASAERATAAARVAAELANVNLG MKFEGGQTSEC
Sbjct: 276 TR-PPSDVLEKAKAAIASAERATAAARVAAELANVNLGTMKFEGGQTSEC 323

BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|955393070|ref|XP_014628249.1| (PREDICTED: uncharacterized protein LOC100820205 isoform X2 [Glycine max])

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59
Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAIASIIFAAPRCSD+PDLL +KNLF  KYGKEFVSA+SELRPDSGVNR+II
Sbjct: 60  RECPTELREAIASIIFAAPRCSDVPDLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTII 119

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQ-GAAASQT 141
           EKLSVSAP GE+KLKV++EIA+E+ + WDSS T +EF K HEDLLGG K V  GA  S T
Sbjct: 120 EKLSVSAPSGEVKLKVLREIAEEYNIAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHT 179

Query: 142 PQHSSSNSSIP-YAHPAVSPM-GRQEPECHHTFSPISNS----TNEIKPGPKKFDVKPEV 201
           P  + SN+  P    P++ P+  +QE +     SP +N+    TNEI+   K  +V P  
Sbjct: 180 PSRNGSNNPSPCITEPSIKPVQDKQEYKHLEAPSPSNNNSSLDTNEIEQSHKNNNV-PAG 239

Query: 202 AAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEG 244
            AK +TR   SDVLEKA+AAIASA+RA+AAAR AA L   N G++K EG
Sbjct: 240 DAKSETRFQSSDVLEKARAAIASADRASAAARAAAALVQSNFGSLKLEG 287

BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|356575558|ref|XP_003555907.1| (PREDICTED: IST1 homolog isoform X1 [Glycine max])

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59
Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAIASIIFAAPRCSD+PDLL +KNLF  KYGKEFVSA+SELRPDSGVNR+II
Sbjct: 96  RECPTELREAIASIIFAAPRCSDVPDLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQ-GAAASQT 141
           EKLSVSAP GE+KLKV++EIA+E+ + WDSS T +EF K HEDLLGG K V  GA  S T
Sbjct: 156 EKLSVSAPSGEVKLKVLREIAEEYNIAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHT 215

Query: 142 PQHSSSNSSIP-YAHPAVSPM-GRQEPECHHTFSPISNS----TNEIKPGPKKFDVKPEV 201
           P  + SN+  P    P++ P+  +QE +     SP +N+    TNEI+   K  +V P  
Sbjct: 216 PSRNGSNNPSPCITEPSIKPVQDKQEYKHLEAPSPSNNNSSLDTNEIEQSHKNNNV-PAG 275

Query: 202 AAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEG 244
            AK +TR   SDVLEKA+AAIASA+RA+AAAR AA L   N G++K EG
Sbjct: 276 DAKSETRFQSSDVLEKARAAIASADRASAAARAAAALVQSNFGSLKLEG 323

BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|1009155255|ref|XP_015895613.1| (PREDICTED: IST1 homolog [Ziziphus jujuba])

HSP 1 Score: 235.7 bits (600), Expect = 8.6e-59
Identity = 139/223 (62.33%), Postives = 163/223 (73.09%), Query Frame = 1

Query: 22  RECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSII 81
           RECP ELREAIASIIFAAPRCSD+PDLLQLKNLF  KYGKEFVSAISELRPDSGVNR+II
Sbjct: 96  RECPTELREAIASIIFAAPRCSDVPDLLQLKNLFNAKYGKEFVSAISELRPDSGVNRTII 155

Query: 82  EKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQ-- 141
           EKLSV AP G+++LKV+KEIA+E  + WDSS+T +EFSK+HEDLLGG K +  A      
Sbjct: 156 EKLSVHAPSGDVRLKVLKEIAREFNVDWDSSNTEAEFSKSHEDLLGGSKQISAATGDSIV 215

Query: 142 TPQHSS--SNSSIPYAHPAVSPMGRQEPECHHTFSPISNS------TNEIKPGPKKFDVK 201
             +H S  S +SI  +       G+QEP+  H   P S S      TNEI+P  +  D  
Sbjct: 216 PAKHGSFKSTTSIEASQSITPTHGKQEPQ--HLQVPKSLSKMPSFGTNEIQPSIRDDDAP 275

Query: 202 PEVAAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANV 235
           P +  K +TRP  SDVLE+A+AAIASAERA+AAAR AAELANV
Sbjct: 276 PAIDFKHETRPRSSDVLERARAAIASAERASAAARAAAELANV 316

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KMU2_CUCSA3.7e-10188.70Uncharacterized protein OS=Cucumis sativus GN=Csa_5G367190 PE=4 SV=1[more]
I1NFJ5_SOYBN9.2e-6061.14Uncharacterized protein OS=Glycine max GN=GLYMA_20G116300 PE=4 SV=1[more]
A0A0B2PUJ2_GLYSO9.2e-6061.14IST1 like OS=Glycine soja GN=glysoja_015308 PE=4 SV=1[more]
I1NFJ6_SOYBN9.2e-6061.14Uncharacterized protein OS=Glycine max GN=GLYMA_20G116300 PE=4 SV=1[more]
M5XDF0_PRUPE2.3e-5862.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008869mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G25420.11.8e-5152.73 Regulator of Vps4 activity in the MVB pathway protein[more]
AT1G34220.11.2e-3145.91 Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G35730.16.8e-3040.28 Regulator of Vps4 activity in the MVB pathway protein[more]
AT2G19710.15.0e-2532.71 Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G29440.11.8e-2230.56 Regulator of Vps4 activity in the MVB pathway protein[more]
Match NameE-valueIdentityDescription
gi|659131631|ref|XP_008465781.1|1.3e-10288.26PREDICTED: IST1 homolog [Cucumis melo][more]
gi|449445148|ref|XP_004140335.1|5.3e-10188.70PREDICTED: IST1 homolog [Cucumis sativus][more]
gi|955393070|ref|XP_014628249.1|1.3e-5961.14PREDICTED: uncharacterized protein LOC100820205 isoform X2 [Glycine max][more]
gi|356575558|ref|XP_003555907.1|1.3e-5961.14PREDICTED: IST1 homolog isoform X1 [Glycine max][more]
gi|1009155255|ref|XP_015895613.1|8.6e-5962.33PREDICTED: IST1 homolog [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0048573 photoperiodism, flowering
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G010320.1Lsi09G010320.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161UNCHARACTERIZED DUF292coord: 22..234
score: 9.7
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 22..107
score: 1.9
NoneNo IPR availablePANTHERPTHR12161:SF21REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEINcoord: 22..234
score: 9.7