Lsi09G010320 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTATTGGTTTAAATTGTGATCCCTCTAAAGTTGACTCTTGGGGTCTTTGGTGGGTTGTGAGGTTAGCCAAATCCCTTGTTCATATTTGGGGCTTCTCCTAGGAGGCAATCCTAGAAATGTGTCATTTTGAAACCCTGTGGTGTAAACAGTACAAAGGAGGCTCTCGTTTTTTTTTTGGGAGGATTGGTGAGTGGGAGTCGAGCCTTGTTGTGCGTTATTTTCACATCTTTATCATTTGTCTAAGAAGAGGTTGTCGTCAGTTGCCTCTATTTTTGTCAACGTCTTGAGTCGTCTCCCTCTATCTCTTTGAATCTTTGTTGTCCTTTGACTTATTGCGAGTCTTTGGAGGTGGTGGTATTCTCTCTCCTAATTCTATTCTAGGTAGAAGTGACTTGTGCATTTGGGACCCTAATCCTTTTAACGGGTTCTTTTCTTGTTCGCTTTTCATCCTCCCTTCACTCATTCAGAGACCTTAGTTTTTGAGATAACATATCATGTAGTTTGACAGTAGATTTTGTACTGAATAGGAAGTCTATTGTCGTCACATCTCATCCTAGGCTTAGTAGGGTAGTTTGGGGCAGGGTGGGAAAGTTTTCTCCTCTTTGTGGAAGGTTAAAGTTCTTAAGAAAGTTTGTTTGTTTTTTTTTTTCCTTGTCAAGTTATACATGGTAGAGTAAACACCCAGGATTGTATCCAGGGGCACACTACCTTGGTTTGCACTCATAGTGGTGCACTTTTTAGACAGCAGAGGAGGATCCTGATCATCTTTTGTGGTACTATTAGTTAGTCTCTGTGGAGCCCATGCTTTAGTTTGTGGGTTGATGTGATTCGTAATTTGGATTGCCAGTCTTTCTCCGAAGAGATTGCGGTGAATCCTGTTTCATGATTAGGGGAGGATCTTGTGGCAAGTTCGTTATTTTGCTATCTTGTGGGGAGTGTGGATTGAGAGAGACAGTGGGATTCGTAGAGGGCTAGGGATCTTTGGATTTAGTTTGGGAGGGGGTGAGGTCTAATGCCTCGTTATGTGCATTTGTTTGTGGGGTTTTTGTAATTATCTGCTTAGCTATCAATTTTTGGGTTGGAGCTTGTTCTCGTACGTAGCAGAGGGCTTTTTTTTAATTTTTTTTAATTTTAATAACCTTGTATATTCTTTCATTTTTTTTTTTCAATTAAAGCTTGTTTCTTACCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGGAAAAAAACCGGACCATTTTGGAGCCCTTTTATATAAATGTTCTTACTTTGTGCTTTTTGTCTGTCCGTAGTTAACTACTAAATTTACCATAACAGAGAATGTCCAGTTGAACTACGAGAGGCTATTGCGAGCATAATATTTGCTGCTCCTAGATGTTCTGACCTCCCAGATTTACTTCAGCTGAAGAATTTGTTTGCAGTGAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGATTCTGGTGTTAACCGATCAGTTGAGTGTATCTCAAGTTTAATCATGAGCAGTACTATCTTGTTTTTTGAGAATAAAAAGGATATCATTCGTTTACTACTTTGTTTTCATTTCAGATTATTGAAAAGCTTTCAGTGAGTGCTCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCACAAGAACATGGACTCCACTGGGATTCTTCCAGCACTGCATCTGAATTTAGTAAAACCCACGAAGATCTGCTGGTATGATTGCATACTTGAATTTTACTTGTTCCTGAAAACTCTCTGATTTTTGTGACATTTACAAAGAACCTTGTTGATCACTTTAAGCACAACCCTATAGTTGATATTCGATTCATAATACTGTAGTGGAGTTATAAATGGTTTATGTTCTTGCTTCTGGAAACACTTTGGGCTATTCTACTGACTGCATAATTCTCCATCCTTCCCGTTACATCTTGGCTTGATTTGAATTGGAAAATGCTTGTATCTCAATGAAAATGGTTATGAGATTCTAGGATTTGTAGAAGTCGCGAGCTCTTCCTTCTCCAGGGGTCCCCTCCATATTTTGTGACCAAAATTCTGTTGCCCACCACCCTGTTCCTATCAATAACTGTTGAACCCTTACAAATTGCCAACATACTCAGAAACAGTATTCAGTAAGACTAACAGGCTAACAGACTTGTTTACTTAACTAGATTACAACTTCAGATAAAGATTTTTGTTCCCTCTGCTGAAAATGCACTTTAATACCTTCAAGTTAAAGTTTACATTTCGACAATATTTGTGGCTCGCTATTAGCACTCATAGTTGTGATAAACTAATCTATTTTTGTGAGAAGTGAGAACTAAATCTTCTGCTAACGTTAGGGATACTTTTAGTTTAATGTGGAGTTTGAGCCCCTTATTTTTACTTATTTATCTGTTTTTAGGTTTTGATATTTCACAGTTTAATTGATCTTGAGTTTTTAGATTGTTAAATTACATTGAATTATTGTCTCCGTTCGGTAATCATTTGGTTTTTGAAAATTAAGCCTATAAACACCACTTCTATTTATTGGTTTATATGTAAGTCTACATTTTAGGAGTGTTCTCAAAATCAAAGCCAAAATTTGAAAACTAAAAAAAGTAGTTTTTGTTTTTGAAAATTGTCTAAGAATTCAAATGTTTATATAGGAAGTATGAAAACTATTAGTAAGAAATTGTGAGAAAACAAGCACAAATTTTAAAAAGAAAAACTAAATACCAAGGTCCCGTTTGGTAACTATTTTGTTTATGGTTTTTGAAAATTGTGTATTTCCTCTCATTTTCTTACAATGGTTTGCATCTTTCAAAGTTGAATTCTTAGCCAAATTCCAAAACCAAATGCAAGTTCTATAAAACTAGTTTTTTAAGTTTTCAAAATTTGATTTGGTTTTTGAAAACATTGGTAAAAAGTTGAGAATAAGGCAAAAAAATTTAGAGGTGGAATGAGTGTTTGTAGGCTTAATTTTCAAAAACTAAATGGTTACCAAATGGGGTCAAAATGATCACCAAGGGACCTTATTGATTGGTTTGTCAGTAGTTATTTATTTAGTTTTGACGAGGTAACATTCACAACTTATTTGATTTAAAGTTTAAATGGATAAAACTGAAAGTTGAATATTAAAACTGACAAGTTGAGCAAAGTAGAAGGGTAAAAAGTGATCTTTTTGACATAAAGAAACTCTGAATACAATCCCTTAGGTTTGAGCTTGTTAATTTTCTCCCAGAGGACTTCTAGTTGATTAGCCAGCCAATTAAGAGAGATGAACTGTGGATGTTTTTATGAACATTAAAGGAAGGAGATTCTCCCCCTCTATTAAGCTTGTAAATTTATGGGCTTATCTCTGTCTCTCTTATATGGAGCTGTTATGTGATTTGCTACAAGCACTGGAGTGAGTTTGTTATAGTTAACTTATTCTGTTTTCGATTGTCCATCATGTGGCCTTTTTTATGCAGGGTGGACCCAAGGTAGTACAAGGAGCAGCAGCCTCTCAAACTCCTCAACACAGCTCTTCGAATTCTTCCATTCCTTATGCACATCCCGCCGTGTCTCCCATGGGAAGGCAAGAACCCGAATGCCACCATACATTCAGCCCAATTAGCAATAGTACAAACGAAATCAAACCAGGACCTAAAAAGTTTGATGTCAAACCAGAAGTTGCTGCTAAATTAGATACAAGACCACCTCCATCCGACGTATTAGAGAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCCGAGCTAGCAAATGTCAACCTTGGAGCAATGAAGTTTGAAGGAGGACAAACTTCGGAGTGCTGAAGACAAAAAGAAAGGTAATTTACACATTTGTTTGATACTGGACTCGTGCATAAAGTCTCTGTTTGAACTGTCCTAAAAGCTTGAAGAGTGACGAGTCAATCCACAAGTGGAAGCGAACCAAATCTATGTAATTAATACAGTTCAAGTAAAATTTATTTGTAAAATACTGAAGTTCTTATTTCACGAAACCTCACCTATGGTGATGTTGGTCAAGTTCTAATGGTGCAGCAGTTTGATATAAATGCCACATTAGAAGAAAACTAAGTTTGCTCTAAAATATGAGCAATGTTCTTCCTTCACATATGAGCATGCATGCTTCCTTTGCTTCTGTTTGGTAAATGTTCATATTTTTCATTTTATAAACCTTTTCAAAAAGGTACAATGTACTTTTGATTTAAAAGATTTAAGGTAAGTGTCTATTTAGTCTTTGAAATTTT ATGATTATTGGTTTAAATTGTGATCCCTCTAAAGTTGACTCTTGGGGTCTTTGGTGGGTTGTGAGAGAATGTCCAGTTGAACTACGAGAGGCTATTGCGAGCATAATATTTGCTGCTCCTAGATGTTCTGACCTCCCAGATTTACTTCAGCTGAAGAATTTGTTTGCAGTGAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGATTCTGGTGTTAACCGATCAATTATTGAAAAGCTTTCAGTGAGTGCTCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCACAAGAACATGGACTCCACTGGGATTCTTCCAGCACTGCATCTGAATTTAGTAAAACCCACGAAGATCTGCTGGGTGGACCCAAGGTAGTACAAGGAGCAGCAGCCTCTCAAACTCCTCAACACAGCTCTTCGAATTCTTCCATTCCTTATGCACATCCCGCCGTGTCTCCCATGGGAAGGCAAGAACCCGAATGCCACCATACATTCAGCCCAATTAGCAATAGTACAAACGAAATCAAACCAGGACCTAAAAAGTTTGATGTCAAACCAGAAGTTGCTGCTAAATTAGATACAAGACCACCTCCATCCGACGTATTAGAGAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCCGAGCTAGCAAATGTCAACCTTGGAGCAATGAAGTTTGAAGGAGGACAAACTTCGGAGTGCTGAAGACAAAAAGAAAGGTAATTTACACATTTGTTTGATACTGGACTCGTGCATAAAGTCTCTGTTTGAACTGTCCTAAAAGCTTGAAGAGTGACGAGTCAATCCACAAGTGGAAGCGAACCAAATCTATGTAATTAATACAGTTCAAGTAAAATTTATTTGTAAAATACTGAAGTTCTTATTTCACGAAACCTCACCTATGGTGATGTTGGTCAAGTTCTAATGGTGCAGCAGTTTGATATAAATGCCACATTAGAAGAAAACTAAGTTTGCTCTAAAATATGAGCAATGTTCTTCCTTCACATATGAGCATGCATGCTTCCTTTGCTTCTGTTTGGTAAATGTTCATATTTTTCATTTTATAAACCTTTTCAAAAAGGTACAATGTACTTTTGATTTAAAAGATTTAAGGTAAGTGTCTATTTAGTCTTTGAAATTTT ATGATTATTGGTTTAAATTGTGATCCCTCTAAAGTTGACTCTTGGGGTCTTTGGTGGGTTGTGAGAGAATGTCCAGTTGAACTACGAGAGGCTATTGCGAGCATAATATTTGCTGCTCCTAGATGTTCTGACCTCCCAGATTTACTTCAGCTGAAGAATTTGTTTGCAGTGAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGATTCTGGTGTTAACCGATCAATTATTGAAAAGCTTTCAGTGAGTGCTCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCACAAGAACATGGACTCCACTGGGATTCTTCCAGCACTGCATCTGAATTTAGTAAAACCCACGAAGATCTGCTGGGTGGACCCAAGGTAGTACAAGGAGCAGCAGCCTCTCAAACTCCTCAACACAGCTCTTCGAATTCTTCCATTCCTTATGCACATCCCGCCGTGTCTCCCATGGGAAGGCAAGAACCCGAATGCCACCATACATTCAGCCCAATTAGCAATAGTACAAACGAAATCAAACCAGGACCTAAAAAGTTTGATGTCAAACCAGAAGTTGCTGCTAAATTAGATACAAGACCACCTCCATCCGACGTATTAGAGAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCCGAGCTAGCAAATGTCAACCTTGGAGCAATGAAGTTTGAAGGAGGACAAACTTCGGAGTGCTGA MIIGLNCDPSKVDSWGLWWVVRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEFVSAISELRPDSGVNRSIIEKLSVSAPPGELKLKVMKEIAQEHGLHWDSSSTASEFSKTHEDLLGGPKVVQGAAASQTPQHSSSNSSIPYAHPAVSPMGRQEPECHHTFSPISNSTNEIKPGPKKFDVKPEVAAKLDTRPPPSDVLEKAKAAIASAERATAAARVAAELANVNLGAMKFEGGQTSEC
BLAST of Lsi09G010320 vs. TrEMBL
Match: A0A0A0KMU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G367190 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 3.7e-101 Identity = 204/230 (88.70%), Postives = 211/230 (91.74%), Query Frame = 1
BLAST of Lsi09G010320 vs. TrEMBL
Match: I1NFJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G116300 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60 Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1
BLAST of Lsi09G010320 vs. TrEMBL
Match: A0A0B2PUJ2_GLYSO (IST1 like OS=Glycine soja GN=glysoja_015308 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60 Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1
BLAST of Lsi09G010320 vs. TrEMBL
Match: I1NFJ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G116300 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.2e-60 Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1
BLAST of Lsi09G010320 vs. TrEMBL
Match: M5XDF0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008869mg PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.3e-58 Identity = 136/217 (62.67%), Postives = 162/217 (74.65%), Query Frame = 1
BLAST of Lsi09G010320 vs. TAIR10
Match: AT1G25420.1 (AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 199.9 bits (507), Expect = 1.8e-51 Identity = 116/220 (52.73%), Postives = 149/220 (67.73%), Query Frame = 1
BLAST of Lsi09G010320 vs. TAIR10
Match: AT1G34220.1 (AT1G34220.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 1
BLAST of Lsi09G010320 vs. TAIR10
Match: AT4G35730.1 (AT4G35730.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30 Identity = 85/211 (40.28%), Postives = 118/211 (55.92%), Query Frame = 1
BLAST of Lsi09G010320 vs. TAIR10
Match: AT2G19710.1 (AT2G19710.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 112.1 bits (279), Expect = 5.0e-25 Identity = 87/266 (32.71%), Postives = 129/266 (48.50%), Query Frame = 1
BLAST of Lsi09G010320 vs. TAIR10
Match: AT4G29440.1 (AT4G29440.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22 Identity = 77/252 (30.56%), Postives = 121/252 (48.02%), Query Frame = 1
BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|659131631|ref|XP_008465781.1| (PREDICTED: IST1 homolog [Cucumis melo]) HSP 1 Score: 381.3 bits (978), Expect = 1.3e-102 Identity = 203/230 (88.26%), Postives = 210/230 (91.30%), Query Frame = 1
BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|449445148|ref|XP_004140335.1| (PREDICTED: IST1 homolog [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 5.3e-101 Identity = 204/230 (88.70%), Postives = 211/230 (91.74%), Query Frame = 1
BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|955393070|ref|XP_014628249.1| (PREDICTED: uncharacterized protein LOC100820205 isoform X2 [Glycine max]) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59 Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1
BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|356575558|ref|XP_003555907.1| (PREDICTED: IST1 homolog isoform X1 [Glycine max]) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-59 Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 1
BLAST of Lsi09G010320 vs. NCBI nr
Match: gi|1009155255|ref|XP_015895613.1| (PREDICTED: IST1 homolog [Ziziphus jujuba]) HSP 1 Score: 235.7 bits (600), Expect = 8.6e-59 Identity = 139/223 (62.33%), Postives = 163/223 (73.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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