CmoCh04G021400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Regulator of Vps4 activity in the MVB pathway protein
Location	Cmo_Chr04 : 14635299 .. 14647290 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTAGGTCCATTACTATGTTGTGTTTGAATTCTCTTCCTCGTCAGTGCATGTTCATCGAAAAAAATGCGGTGTCCGTTCATCTGTTAGATAAAAGTTATGGTTTTCCTATTTAGGTTATTCACACGTTCGTTTTTTGATATTTGAATTAATGCCTCCCCGTATAATGGAAGAGCGTATTTTTTGCTGGCATTTTGGCCAACTTTGGGCGCAAGATTTGTGCCACTACTGCTACCACTACTGCTAATTTTAGGATAGGATAGTTATTTAAATATGTCAACAGAATGAAAATAACAACCCATCGGGTCTTCAGTGCAAATATTCTCTCTCCCTTTGTTTTCCGTTATTTTCTTCTTACAATAAGTTTTCCTTTGGCTGTTTTTACTCCGTCGACGATTTCCTCTCAATTGCCAAATGGTATTAGAGCCTGGTTTAATCCACCAGTGGTATATCATTCAGAGGAGCTGACTTTATCAAAAGCCAAGTTGAATAGCTCAAGTAGTTAGAGCGTCGACCTAACAACACACAGGTCTCAAGTAGAAGAAAATGCAAAACGTGAAAATACACATATCGTGGGGTCCATCTCGAGCAGGCTCACTCACACCTCCACATTGTCGAGCCGTAGAGGAAGGAGAAACGATCGAGTACCGGGAGGATCGCCTAGCGTTCGCCGCTATATTACAGTCTGTGCCTCTAGAGATGTTGACGTCTCTCTCCACTAAGCGCACGGGGCTCACCAACAGCAATGGTCTGTGCCTCTAGAGATGTTGGCATCTCTCTCTAGAGACATTACTTGACGTGAACTGAACGACCTATGTTGAACAGCGGAAGAAGAATGCCGCTTCAGGAGTCGATCGATGACGGCGGGAAGAAGGGCCACTTGAGCAACACTCTTTTCATGGTGAGTGCATCGGTCATATTCAACGTCCCCAATTTCGATTCCAAATCCACAGATGTGGAGGTAATCAGCGAGGGGCGAGCAGCATGAGCACCGACAAGAGGTCCTCGACACAATGTCAACAAACCATATGACCGGGGCAAGATCCGTGTTCTCTGAGCTTGACTCGGGGATTCGCGAGAGTGAAATTCAGTGATGGCTCTGTTGAAGGGCGCAGCACCATCCTGTTCGTTGGCAAAGGAGGCAAGCACCACAAGTTGACCAATGTCTACTTCCATCCCGAGGCTCAAGGCTAACCTTGGGCGCGACACCATCCTGTTCTTCGGTAAGGGAGGCGAGCACCGTAAGTTGACCAGCGTCTATTTCCATCCCGAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAACTCAATGAGGTCGGCTACTTCATTTCCATCGGGTGTCTCATCGGGTCAACTCAAGGCTGTGCCACGGGTGACTCATCGAAAAGCAGAGGCACACCCTCTTTCCATCTCAGGCATCCTACCGTGCCGGTGAGCTGTTGGAGCTCGTGCACAGCGATATCTGCGATCCCACTAAGCCGACGACCCTAGGTGGCAAGACCCTCTTCTTCCTACTGGTCGATGACAAAAGTCGCTTCATGTGGTTGATCCTGCTGCAAGCGAAAAGTGAGGCGGTAGAGGCGATTCAGCCCATTCAAGTGCAAGCGGAGGCCAAATGCGGTGAGAAGATGCCTAATGCTGCGCACGGACCGAGGCGGGAGAATTTACCTCAACGAGCTTCTATAAGTATTGCGACGAGCTCGGCATGCAGCGGCAACTAATGGCGCCATACTCCCCCCAGTAGAACGGGGTAGTGGAACGCCGAAATTAGACCATTGTTTGGGACAGCAAGGTCTGTCTGGAGAATTTACCTCAGCGAGCTTTGGTAAGTATTACGACGAGCTCGACATGCAACAGCAGCTAACTACGCCCTACTCCCCCCAACAGAACGGGATGGTGGAACGCCAAAATCAGACCATCGTTTGGGACAGCAAGGTCATTGTTGATGATGGCCGGGATGGATTATTCAAGAAATTAGACTATGATTTAAATACTGAAATCTTATTCGATTCTTGCTTTTTAGAACCCCCCCTTCTGTTTCCCTTTTGACTGTTGGATCTTTCAATGCACCGTTATATCCTTTCTCGTCTTGATACCCGAGTGAGGGACCCCTACGATGCCTAGGGGGCCCGAACCTTCCTTTATACACTAGGAGTTTTTTAAGGGACCCTGACTTATTGTTTGCACCAGGGTGGTGGAACGCCAAAATCAGACCATCGTTCAGGACAGCAAGGTCATTGCTGATGATGACCGGGATGCCAAGAGGTTCTGGAGAGAGGCGGTAATGACGGCCATCTATATCCTCAATTGATCGCCAATGCAAAGCCTTGACGGGAAGACGCCACATGGGGAGGCCGAATGCGGTAAGAAGATGCCTAATGCTGCGCAAGGACCGAGGCGGGAGAATTTACCTCAGCGAGCTTCAGTAAGTATTGCGACGAGTTTGACATGCAGCGACAACTAACGACGCCCTACTCCCCCAGCAGAACGGGGTGGTGGAACGTCGAAATCAAACCATCGTTTGGGACAGCAAGGTCATTGCTGATGACGGTCGGGATGCCTAGGAGGTTCTGGGGAGAGACGGTAATGACGACCTTCTATCTCCTCAATCGATCACCAACACGAAGCCTTGATGAGAAGACGCCACATGAGGCCTGGTACAACAAGAAGCCAGTGGTACATCATCTCCGAGTGTTCGGCTACGTCGCATACATGAAGGTAGCGCGTCCCCACGTTGCCAAGCTCAATCCTACGGGGGGCGAGCTCACGTGTCTCGCGACGTCATCTTCGACGAAAGCCTTCTGGCAGTGGAACGACGTGACCGAGGTAGACTAAAACCCAAATCAATTCACAGTGAAATACCTCGTCATCGAGCCAGAAGAAGGAGGAGCGCAACATCGAGAACAGTCACCGCCGTCAGCAGCTACACCCCCTGAACCAGTGGAGTTTGCAACACCACGGACTGTGGATTAAACGTTGGATGCCGATCACGATGATGATTTGGTGGCCAGGTACTGGAGGATGGAAGACTTAGTGGGAGGAGGTGAACCACCTGGACTGGCAGCGCGAACTCGAATAAGAGGTGGCCGAACTGCATGCCATTAGTGCAAATGAACCGAACACCTTCGCTGAAGCAGAAAGGAACCTGTGCTGGTTGAAGGCAATGCAGGAGAAGATGACATCCATCACTGAGAACCAGACGTGAAGTCTGGAAGACATGCCGCCGGGACACCGAGCTATAGGGCTCAAATGGGTCTTCAAACTGAAGCGTAACAAAAAGGGAGAAGTTGTGAAACACAAGGCCTGTCTGGTGGCGAAGGGCTATGTCCAGAAGCAAGGAGTGGATTTCGAGGAGGTATTCGCGCTAGTGACAAGGCTAGAATCTGTCCGCCTATTGTTGGCAATCGCAGCATATCATTCCTACGAGGTCCACCACATGGATGTAAAATTTGCGTTCCTAAATGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCGGGCTTCCTGGACAACGACAACCCTGACAAGGTATTGCGCCTTCACAAGGCACTCTATGGCCTTCGGCAAGCACCACGAGCCTGGAACGCGAAGCTTGATAGTAATCTACTGTCGCTGAAGTTCAAGTACTGTGCCTCTGAGCATGGCATGTACACGCACGCCCACAACGAGCAGCGACTGATCGTGGGAGTGTACGTCAACGACCTCATAATCACTAGAGGCGACATGGAAGTCCTCAAAAGATTCAAGAGGGAGATGTTAAAGAACTTCAAGATGAGCGATTTCGGCGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAGTACTGCCCGTATCACCATCTGCTAGAGTGCGTACGCGAAGAAGCTATTGGACACAACTGGGCTTGCGGACAATAACCCTACAAGGACGCCAATGGATGCCCGGCTCCAGCTATGGAAGGTCGGCACTACGACGGCAGTCGATGCCACCAATTACCGCAGAATTGTTGGGAGCCTGTGATATCTGGTAAACACAGGTCCTGATCTTGCTTATTCGTTGGATACGTGAGTAGATTCATGGAAGCATCTAGGGAGGAACATCTTGTGACTGTCAAGCGCATCCTGCGCTAAGTGGCTGGAACCAGAGGCTGGGGTGTGAGATACTTTGCAGGGAGAGAAAAGGAGAAGTTTGAGCTGGTCGGCTACAGTGATAGTGACATGGCCGGTGACGTTGATGATCATAAGAGCGCCAGTGGGATGATTTACTTCCTCTCAGGTGGCACGATCTGCTGGCAATCAACAAAACAAAAGGGAGTTGCTTTGTCTTCCTACGAAGCAGAATACATTGTCACTTTGACGACGACAACACAAGGGGTCTGGCTTGCACAACTGATGGAAGAACTCATCGGAAGAGAAGACGATCTACCAATGCTATACGTTGACAATAAAGCTACGATCTCCCTGATCAAAAATTCAGTTTTGCACGACCGGAGCAAGCACATATAAATCAGATTCCACTACATCCAAGAATGTGTAGATTGGAGGCTCATCAAGATTGATTTCATTCGAACAGAGGAACAGCTTGGAGACATTTTTACCAAGTCCCTGACGCGGGTAAAATTTGAAGAACTACACTAAAAGATCAGAGTTCAAATAATAAGGTAGATATACCACAGCTTTTAGGAAGAGATTGTTAGATAAAAGCTATGGTTTTCCTTATTTAGGTTATTCACACGTTTCCTTAAACTTAGTTAGGTTCTTTTTTTTTGTTGGATATCTGAATTAAGCTCCTCGTATAAATGGAAGAGCATATTTTTTGCTGGCCATTTTGGCCAACTTTGGGTGCAAGAATTATGCCACTACCGCTAATTTTAGGACAGGATGGTTATTTAAATATGTCAACTGAATAAAAATAACAATCCATCTGGTCTTCAACGCAAATATTCTCTCCCTTTGTTTTCCGTTATTTTCTTCTTCCAAGAAGTCTTCCTTCGGCCGTTTTTTACTCCGTCGACGATTTTTTCTCGATTGCCAGAAGTCAACATCGTCTTCCTCCTTTTCTTTATCATCTGCCTTCTCTCTTCCTCTCTCACGCTCTTCGAAGATTTCGTGGTGTTTGGAGGGCAGGTGTTAGTGGTCTAAGAGGAAAGGGAGGAGCATGGAGTGGGTAGGCTGAGAGCGTGAGAATTCCGACACCTCGATGGAATTCTCGCATTTTTTTGGCAACTACGTAAAAATATATAACTTTTTTATACTCACCGTTACCTTCGAAAATGAACAAAAAATGGGTGATGAACTAAATGAATGGGAGATGAACCAAATAAATTTCAATACATGCATACGAGAGGGGAAGGTACCAAAAATGTTCATGAATCCGAAAGATTCATGAACCTATACTTCAAGACAATTTACAACAATTTCTATCATGTCAGAAGATCTCCAAGCAGATAACTAGTTTGGTTGCAACTGAGTCAACAGACTACTTCTTTCGTCTAACATTGATTTTATTCAAGTAATGCAAATACTTTTCACGAGCAATCACCTTTGCAAGATATCCGCAAGATTATCAACAGTTTCAATTTTCAATAAATGAGTGTCTCATTCATTGATAATTTCTCGAAAAAAATGAAAACGGACTCAATATGCTTGGTATGAGCATGATAGACTTATTCTTTAAAACTCATCTACATGTTTTTTTAGCAATACCCATTAACTAAATCATGCATCCAAATAGCCTTTTTAAAAGCTTTAGTGACTATATTCTGCTTCGGTGGTAGACAATGCAACGGTAGACTGCAATGTTGAATGTCAACAAATAGGTCCACCAGCCATAGTGAATAGATAACCAATAGTGGATCGTCGCTTATCCAAATCACCAACATAGTCATAATCCACATTGCCAACTATGAGGTTGTCAAGATTAAACATCTCTTGTTGTTGAAACTTGATACCAACATTCAAGTACCAAGAATGTACCTAAGAATCCATTTGACAGTCTGACAATGCTCTTTACCAGGATTATGAATATAACAACTCACCATGCAAATCGCGTGTGACTGATCAAGGTCGAGTACACACAAAAGCCCAAACAACATTTGTATAAGGAACATTCTCCATAGGAATTTTATCATCATTAGAACCTGGACATATGGAAACATTAAGCTTGAAATGAGGAGTAAGTGGCGTACCGACTGGTTTAGTTGAATTATTCCAACAAAATTGTGTCAACACTTTGCGTAGATATTGAGACTAGGTCAACCAAACTGTACCTCTTCTTCAAGCTCACCCTATCTCCATACCAAGTATTTTATTTGATTTGCATAAATCTTTCATTTCAAATGTTTTAGAAAGCTTATCTTTGAGCTTATCAATCTCCACATGTCTCTTGGAAGCAATTAACATATCACCAACATACACATTGATCAAATTGACTGTGAGTGTACTTATGCTCTACCATGAAGTGTTCAAACTTCTTATACCATTGGCAAGGAGATTGCTTCAGCCCATACAAAGATTTCTTCAATCTACATACCGAATGTTGTTGCCCAACTACGTGAAAACCAACTCGTTGTGCCATATATATTTCTTCTTCTAAATCTCCATGCAAGAAAGTAGTTTTTACATCGAATTGTGAAAGCTCAAGATTAAATTGAGCAACCAAAGCCAACAAAATCCGAATGGAAGAATGCCTTACCACATGTGAGAAAATCTCATCGTAATCAATTCCTTCCTTCTGCGCATAGCCTTTAGCCACAAGTCAAACCTTATAACGTATATTAGAAGTTTTGCATAGTGATCTGAGGTGCAATTACTGTGAGGTTGATGATGGTACCTAGATAAACGTAAGACATAGAGTTAATATTACCTAAAGCCCTCAAGATATGAACCCTAAAGGGGATAAAGTACTCCTTGGAGGTATGTGTAAGGTCTAGGTAAACAAGAATTTGAAAATGGTAGTATAAATCTCTAGCCATCGTTTTGATTAACTCTAAAAATAGTTTAAGCACGTAGCTTCAAATTTTATGTATAGGAATAAGTTTCAATAAGAGCCTACAAGTAGGTTACTGATAAATTATTTTTAATACTCACTCTTATTACATTTTCTTTTTCAGGTGATCAGTAGATCACTAACCATGATCAATTATGTGTCAAGCTGTGCGGTTGTAGAGGGGACCGTTGATCTAAGTCCTATGTTTACTTATATATATATATATATATATATATATATATAATACACACAATGAGTTAATCTAAAATGGTAAAACAAAATCTAGCATTAATGTTAAAATAAAACAAAATGCAATAGCTCCATTAAAGTTTTACGAGTTGTTAGGATTGTTAAGAATGTTAGGGGCATTATTGTTGGAATGCAATATTAAGATTATGATAATGAAAATAAAAAACAGGTTTAGAATTTTTGCAAAATTTAATCCATTTTTTAAGCTGTTACCGCCCTTAATTTATGGGGGGAAAAAAAAATCTTAAAAGCACTGATCTTTTTCTTCGGTGGATTAGTTGGAAAAGGATGCAGTTGACGACTGTGCCTAGATAAGTCGATCGTCAAAGATCGGCTCTCTAATACCGCCGCTGGGAGAACCGAAGCCTCATTCCATTGCAATAATTCCTCTGATATAGACTGTTCTTACTTCAGTGTTAAGAACGGGAAAGGGGAAAGGAGTACATACAGACATCTCGGTTTCATCTTCCTCGTTCAAGCGTCAATGTCACTCCTCAACCAACTCTTCAACAGAGGCGTCTTTGCGGGCAAATGGTCAGCCTTCGATTTTTCTAATTCTAAACCTCCTCACTATTCCATTAACTATGCTTGAATTTGGTTTCGGATCCTCAGCATTACTTAGAATTCATCTGGGATTGTTATCTTTCCGTGGATTTTTTGTTTGTTGGAGATCTTTTTGTGTCGTTAATTTACCAAATCCAACACCGACAAACGAAATTTCTGTTGAGATTTTGCACAAATTTTCGTTCGGCTAAACTTCGACAAAATAATATATCGACCAGTTTTCCAGTTTTTGTATAATTTCGGCAGTTGAATTTTGATTCGTACTCTTCTACCTTTATCATCTCTCGATTAGACTGGGGTTTTTCCGCACAATTTCATGTCAAAATCTATAATCAAACAAGTACTTGTAAACTGATAGCATCCCTTGCATTTTTCTGGGGATGAAAAGTCTAATATATATTGGGTGCTTTGTAGCAAAACTTGCTTGAGCTTGGCAATCTCGCGAATCAAGCTGCTGCAGAATAAGAGGGATCTACAGCTGAAGCATATGCGCAAGGAGATCGCACAATTCTTGCAGACGGGGCAGGAACCAATAGCTCGGATTCGGGTACCCTTTAGAATTTTGAGATCTGTAATGTCTGTCAGTTCTAATGTTTGTTTTACTATCCCTTAAAATAACATGTGTAGTTATCTGTTTTGGCAGGTGGAGCATGTAATACGGGAACAAAACATATGGGCAGCATATGAAATTCTAGAGTTGTTTTGTGAATTTGTTCTTGCTCGCGTCCCCATCATCGAAAGCCAGAAGTAATCTATAGCTCAAAAGTTGTTTTGTGATTTCTTTTTGCTTCTTGGAGTTTCTATTTATATGTTGGTCCACATAAATTGGAACTCCCTTGGTCCGATGGATGTCTGATGATTCTTAGCATTTGGATCTTTAAATAAGTCATGGAAGCTCTTGTTTAACTGGTTCATCTCTATTAATTTTTTTGTTTGTCCCTATTAAAAGTTAATTAGCTATGAAACTAACTTCTAACTGATATGTGGTTCTGAAGCTTACTTGTAATCCCCAGGCATAACCTTCTCTGTTTGTGTTGGACTTAATATCGATTGATGCGTCCTTTACATTTTCCGGTGCATCTTTGGGCTGGGTTATGTTGTAGAATTATAAATTATGTAGTGCTTTCTTTGGTGCTGGTGTCTAATTTAATAGTCTTGAGAAAATCTGTTAGCTGCAAAGTTATTTCAGTTACACTGTTCTAAGCTACAAAAGAAGAAAGTGGTACCTGTTCATTCAATCAAAGGAACTAGTGTCGTGTCTATCTACCAAAATTTATTCACTCAATTTTCTTGTCAGTACTAAGTTGTCATTGACATAATTTTCAACGGTAGTATGTATATGTGAGTTCTCTTGGATAATTATGATAGGAACAGCAGTAGGAATATTATTAGGGTATTAAGGGTTTATTAGTAATTAGTTAGGAAGATTGTTAGGGTATTTGATTCTAAATAGAGGGAGTAGGAAAAGAGGAAGTTAGACAATTGTTTAGTGGTTCGGGCTTCGGTGGCATCTTAAGAAAGTGGAGGTTCAAAGTACCTCAAATACTTGGGAGTTTTCTTGCTGTTCTGTTATCTTTCATATTTCAATGTACTTGGGTTCTATCAAATTGTTGTTAAGATTAGTGTTCCAATGCTATGATGTGAAGATGAGTTCTATTAATTTGCTTGGTTTGATTTGATGCATGTGTTTTTCATTATTTGCTTAGAAACCTGTAGCCTTGGCACATCATTAAAAAAATGGTGAGGTTAATCTGTTGAGTCCTTTTTGTGCAGACCATACTGGGGGCCTTTTATGTGAATGTTCTTACTTTGTGCATTTTGTTTGTCCGTAACTAACTATTAAATTTACAATAACAGAGAATGTCCAGTCGAACTGCGAGAGGCTATTGCAAGCATAATATTTGCTGCTCCTAGATGCTCTGACCTTCCAGATCTACTGCAGTTGAAGAATTTGTTTGCTGTCAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGACTCCGGTGTTAATCGATCAGTTGAGTTTGTCTCAAGTTTATCGTTAGCAGTAGTAATGTTTGTTTTTTTAGAATAAAAGCGAAATGGTTCATTCAATTCTTTGTTTTCATTTCAGATTATTGAAAAGCTTGCAGTGAGTGCGCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCAAAAGAACATGGACTCGACTGGGATTCTTCCTCCACTGCTTCTGAATTTAGTAAAACCCACGAAGATCTGCTGGTATGATTCCCAATTTGATTTTGGTGTTGATTGATCTGAAACACACATTCGTAGTACTATAGCGAAGTTATAAATGACATATATTCTTGCTTCTGGAAACAATTATCCCATTCTACTGACTGCATATTTCTCCATCCTTTCCCTCATATATTGGCATGATATTTCTAACCGCTGTTCCTGAAAAGCCTGAAAGGAACTGAGATTTGAACTACAGAGCTGAATTGGAAAATGCTTGTATTGGAATGAAAATGGTCTAGATTCTATGATTTTTGAGAGATCAAGAGCTCTCCTTTCTCTAGGGGATCCTCTATAATCTTTGAACAAAACTCTGTGGCCCTCCCCCGTTTTCCTATCCGTAACTGTCGAACCCTAACAAATTGCTGACACACGGCTCAAAAACAGTAAGATTAACAAGCTAACTAATTCGTTCACAGTACTAGAGATTACAACTTATGTTGAAAATTTTTGTTCTGTCTGCTGAAAAGAAGAATACCATTATATGAGACCCTCAATCGTGAATACGTACTTTACGAGAGGTAGTAAGGAAAAGGACCACCAGACAATTAGTTGGTGAAACGCTCGTACCAGTGGCATGGAGGTGAGGACTAGCCATTGGAGGGAAGTATTCTGTCTTGGGAGGGTGACTTTTCTTTTGAATAGAACCGTGTTTTAGGGGCTGAGAGGTTAACAGCCATCTTGAAATTGGCTGGGAGTTTGTTTGGGTTCTTTGTGTTATTATGAACTTTGTATCTGTTTTTTAAATTTAATCAAGTTGTAAAGGAGGCACCCTACACATTATTACACCTACTTTTGACTAACTAGTTTGTCAAGTTCAACCTTAAATATTAAATGTCACCAATTTGAACCCTAAACTTAAATAGATTGCACAATTAGTATCCTATTCTTAAGTTCAAAGTTGCATTTTTAGAATATTTGTGGCTGGCTATGAGCATTTTGTGACTAAACTAATCTAGTTTTACGAGAATTAAATCTTCATGTTGGGTACTTTTTTAGCTTGATCTGCGCACCACACACACATACACACACACACACACAAAATGAAGTTTATTGTCATAGTAACTTATTCTGTTCTTGATGGTCTATTCTGTGGCCTTTGTCATGGGATATGCAGGGTGGACCAAAGGTAGTACATGGAGCAGCAGCGTCTCAAGTTCCCTCTCAATATAGCTCGTCCAATCCTTCCACTCCTTATGGAGCAGCGCATCCCGTTGTGTCTGTTGTAGAAAAGCAAGAACCTGAATGCCACCATACGCTCACCCGAATTAGCAATAGTGTAAGTGATATCAAACCGGGACCTAAGAATTTTGATGTCAAACTCGAATTCGCTTCTAAATTAGATACAAGACCACCTCCATCTGATGTATTAGAGAAAGCCAGAGCTGCCATTGCTTCAGCCGAACGTGCCACTGCAGCAGCCCGAGTTGCTGCCGAGCTAGCCAATGTCAACCTTGGAGCAATGAAGCTTGAAGGAGGAGGACAAGCTTCTGAGTGCTGAGGAGAAAAAGAAAGGTAATTGATACATTGTTTGATACTGGACTGGTGCATAAATTGTGTTTGAAGTTAATCGGGTGTCCAAAGATTGAAGAGTGGAGAGTGGGTCAATCCATAAGTGAAACCAAATCCATGTAATTAATAGAGTTGCAAGGAAAATTTAATTCCAAGTATTTGTAAAATACTAAAATTCTTTGGTGATTATGGTGAAGTTCTAATGGTGCAGCAGTTTGATATAAATGCAACATTAGAGGAAAATAAGTTTGCTTTAATTTAAGATAAGTTGCAGACTGAGGAGGGGTAAAGTATTCGCAATGTTCTTCCTGAAAGTATGAGCATCCATTGTAGAAATACTCATAAGTTTGCTTGAGAAATTGTGGATTGCCATCAGCTTTTGGTTAAAATGAAGCACCGTTGCCCCTGTGTT

mRNA sequence

ATGCGCAAAACTTGCTTGAGCTTGGCAATCTCGCGAATCAAGCTGCTGCAGAATAAGAGGGATCTACAGCTGAAGCATATGCGCAAGGAGATCGCACAATTCTTGCAGACGGGGCAGGAACCAATAGCTCGGATTCGGGTGGAGCATGTAATACGGGAACAAAACATATGGGCAGCATATGAAATTCTAGAGTTGTTTTGTGAATTTGTTCTTGCTCGCGTCCCCATCATCGAAAGCCAGAAAGAATGTCCAGTCGAACTGCGAGAGGCTATTGCAAGCATAATATTTGCTGCTCCTAGATGCTCTGACCTTCCAGATCTACTGCAGTTGAAGAATTTGTTTGCTGTCAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGACTCCGGTGTTAATCGATCAGTTGAGTTTGTCTCAAGTTTATCGTTAGCAGTAATTATTGAAAAGCTTGCAGTGAGTGCGCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCAAAAGAACATGGACTCGACTGGGATTCTTCCTCCACTGCTTCTGAATTTAGTAAAACCCACGAAGATCTGCTGGGTGGACCAAAGGTAGTACATGGAGCAGCAGCGTCTCAAGTTCCCTCTCAATATAGCTCGTCCAATCCTTCCACTCCTTATGGAGCAGCGCATCCCGTTGTGTCTGTTGTAGAAAAGCAAGAACCTGAATGCCACCATACGCTCACCCGAATTAGCAATAGTGTAAGTGATATCAAACCGGGACCTAAGAATTTTGATGTCAAACTCGAATTCGCTTCTAAATTAGATACAAGACCACCTCCATCTGATGTATTAGAGAAAGCCAGAGCTGCCATTGCTTCAGCCGAACGTGCCACTGCAGCAGCCCGAGTTGCTGCCGAGCTAGCCAATGTCAACCTTGGAGCAATGAAGCTTGAAGGAGGAGGACAAGCTTCTGAGTGCTGAGGAGAAAAAGAAAGGTAATTGATACATTGTTTGATACTGGACTGGTGCATAAATTGTGTTTGAAGTTAATCGGGTGTCCAAAGATTGAAGAGTGGAGAGTGGGTCAATCCATAAGTGAAACCAAATCCATGTAATTAATAGAGTTGCAAGGAAAATTTAATTCCAAGTATTTGTAAAATACTAAAATTCTTTGGTGATTATGGTGAAGTTCTAATGGTGCAGCAGTTTGATATAAATGCAACATTAGAGGAAAATAAGTTTGCTTTAATTTAAGATAAGTTGCAGACTGAGGAGGGGTAAAGTATTCGCAATGTTCTTCCTGAAAGTATGAGCATCCATTGTAGAAATACTCATAAGTTTGCTTGAGAAATTGTGGATTGCCATCAGCTTTTGGTTAAAATGAAGCACCGTTGCCCCTGTGTT

Coding sequence (CDS)

ATGCGCAAAACTTGCTTGAGCTTGGCAATCTCGCGAATCAAGCTGCTGCAGAATAAGAGGGATCTACAGCTGAAGCATATGCGCAAGGAGATCGCACAATTCTTGCAGACGGGGCAGGAACCAATAGCTCGGATTCGGGTGGAGCATGTAATACGGGAACAAAACATATGGGCAGCATATGAAATTCTAGAGTTGTTTTGTGAATTTGTTCTTGCTCGCGTCCCCATCATCGAAAGCCAGAAAGAATGTCCAGTCGAACTGCGAGAGGCTATTGCAAGCATAATATTTGCTGCTCCTAGATGCTCTGACCTTCCAGATCTACTGCAGTTGAAGAATTTGTTTGCTGTCAAATATGGGAAAGAATTTGTCTCTGCTATTTCTGAGCTTCGTCCTGACTCCGGTGTTAATCGATCAGTTGAGTTTGTCTCAAGTTTATCGTTAGCAGTAATTATTGAAAAGCTTGCAGTGAGTGCGCCTCCTGGAGAACTAAAGCTCAAGGTCATGAAGGAGATTGCAAAAGAACATGGACTCGACTGGGATTCTTCCTCCACTGCTTCTGAATTTAGTAAAACCCACGAAGATCTGCTGGGTGGACCAAAGGTAGTACATGGAGCAGCAGCGTCTCAAGTTCCCTCTCAATATAGCTCGTCCAATCCTTCCACTCCTTATGGAGCAGCGCATCCCGTTGTGTCTGTTGTAGAAAAGCAAGAACCTGAATGCCACCATACGCTCACCCGAATTAGCAATAGTGTAAGTGATATCAAACCGGGACCTAAGAATTTTGATGTCAAACTCGAATTCGCTTCTAAATTAGATACAAGACCACCTCCATCTGATGTATTAGAGAAAGCCAGAGCTGCCATTGCTTCAGCCGAACGTGCCACTGCAGCAGCCCGAGTTGCTGCCGAGCTAGCCAATGTCAACCTTGGAGCAATGAAGCTTGAAGGAGGAGGACAAGCTTCTGAGTGCTGA

Homology

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BLAST of CmoCh04G021400 vs. Swiss-Prot
Match: IST1_BOVIN (IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 66/179 (36.87%), Postives = 103/179 (57.54%), Query Frame = 1


Query: 6   LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILEL 65
           L L I+R+KLL+ K+    +  RKEIA +L  G++  ARIRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 66  FCEFVLARVPIIESQKECPVELREAIASIIFAAPRC-SDLPDLLQLKNLFAVKYGKEFVS 125
           +C+ +LAR  +I+S KE    L E+++++I+AAPR  S++ +L  + +    KY KE+  
Sbjct: 75  YCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY-G 134

Query: 126 AISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSSS 184
            +        VN             ++ KL+V APP  L  + + EIAK + + ++  S
Sbjct: 135 KLCRTNQIGTVNDR-----------LMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDS 181

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BLAST of CmoCh04G021400 vs. Swiss-Prot
Match: IST1_HUMAN (IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 66/179 (36.87%), Postives = 103/179 (57.54%), Query Frame = 1


Query: 6   LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILEL 65
           L L I+R+KLL+ K+    +  RKEIA +L  G++  ARIRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 66  FCEFVLARVPIIESQKECPVELREAIASIIFAAPRC-SDLPDLLQLKNLFAVKYGKEFVS 125
           +C+ +LAR  +I+S KE    L E+++++I+AAPR  S++ +L  + +    KY KE+  
Sbjct: 75  YCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY-G 134

Query: 126 AISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSSS 184
            +        VN             ++ KL+V APP  L  + + EIAK + + ++  S
Sbjct: 135 KLCRTNQIGTVNDR-----------LMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDS 181

[Close]

BLAST of CmoCh04G021400 vs. Swiss-Prot
Match: IST1_MOUSE (IST1 homolog OS=Mus musculus GN=Ist1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 66/179 (36.87%), Postives = 103/179 (57.54%), Query Frame = 1


Query: 6   LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILEL 65
           L L I+R+KLL+ K+    +  RKEIA +L  G++  ARIRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 66  FCEFVLARVPIIESQKECPVELREAIASIIFAAPRC-SDLPDLLQLKNLFAVKYGKEFVS 125
           +C+ +LAR  +I+S KE    L E+++++I+AAPR  S++ +L  + +    KY KE+  
Sbjct: 75  YCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY-G 134

Query: 126 AISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSSS 184
            +        VN             ++ KL+V APP  L  + + EIAK + + ++  S
Sbjct: 135 KLCRTNQIGTVNDR-----------LMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDS 181

[Close]

BLAST of CmoCh04G021400 vs. Swiss-Prot
Match: IST1_RAT (IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 66/179 (36.87%), Postives = 103/179 (57.54%), Query Frame = 1


Query: 6   LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILEL 65
           L L I+R+KLL+ K+    +  RKEIA +L  G++  ARIRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 66  FCEFVLARVPIIESQKECPVELREAIASIIFAAPRC-SDLPDLLQLKNLFAVKYGKEFVS 125
           +C+ +LAR  +I+S KE    L E+++++I+AAPR  S++ +L  + +    KY KE+  
Sbjct: 75  YCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY-G 134

Query: 126 AISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSSS 184
            +        VN             ++ KL+V APP  L  + + EIAK + + ++  S
Sbjct: 135 KLCRTNQIGTVNDR-----------LMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDS 181

[Close]

BLAST of CmoCh04G021400 vs. Swiss-Prot
Match: IST1_PONAB (IST1 homolog OS=Pongo abelii GN=IST1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19
Identity = 65/179 (36.31%), Postives = 102/179 (56.98%), Query Frame = 1


Query: 6   LSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEILEL 65
           L L I+R+KLL+ K+    +  RKEIA +L  G++  ARIRVEH+IRE  +  A EILEL
Sbjct: 15  LRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILEL 74

Query: 66  FCEFVLARVPIIESQKECPVELREAIASIIFAAPRC-SDLPDLLQLKNLFAVKYGKEFVS 125
           +C+ +LAR  +I+S KE    L E+++++I+AAPR  S++ +L  + +    KY K +  
Sbjct: 75  YCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKGY-G 134

Query: 126 AISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSSS 184
            +        VN             ++ KL+V APP  L  + + EIAK + + ++  S
Sbjct: 135 KLCRTNQIGTVNDR-----------LMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDS 181

[Close]

BLAST of CmoCh04G021400 vs. TrEMBL
Match: A0A0A0KMU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G367190 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.1e-128
Identity = 261/321 (81.31%), Postives = 277/321 (86.29%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRD+QLK MRKEIAQFLQTGQE IARIRVEHVIREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDMQLKLMRKEIAQFLQTGQEQIARIRVEHVIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPIIESQ+ECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF
Sbjct: 78  LELFCEFVLARVPIIESQRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSAISELRPDSGVNRS           IIEKL+VSAPPGELKLKVMKEIAKEHGL+WDSS
Sbjct: 138 VSAISELRPDSGVNRS-----------IIEKLSVSAPPGELKLKVMKEIAKEHGLNWDSS 197

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECHH 242
           STASEFSKTHEDLLGGPK V G+A SQ P    S NPS  + +AH   S + K+EPE HH
Sbjct: 198 STASEFSKTHEDLLGGPKGVQGSAVSQTPQH--SLNPSISHVSAHLAASPMGKKEPEHHH 257

Query: 243 TLTRISNSVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARVAA 302
            +  IS + ++IKP PK+FDVK E A+KLDTR PPSDVLEKA+AAIASAERATAAARVAA
Sbjct: 258 AVGPISYNTNEIKPEPKSFDVKPEVAAKLDTR-PPSDVLEKAKAAIASAERATAAARVAA 317

Query: 303 ELANVNLGAMKLEGGGQASEC 324
           ELANVNLG MK E GGQ SEC
Sbjct: 318 ELANVNLGTMKFE-GGQTSEC 323

[Close]

BLAST of CmoCh04G021400 vs. TrEMBL
Match: A0A061ED43_THECC (Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao GN=TCM_009773 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 4.5e-99
Identity = 214/319 (67.08%), Postives = 241/319 (75.55%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQ GQEPIARIRVEH+IREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQAGQEPIARIRVEHIIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPI+ESQKECP ELREA+ASIIFAAPRCSD+PDLLQ+KNLF+ KYGKEF
Sbjct: 78  LELFCEFVLARVPILESQKECPSELREAVASIIFAAPRCSDVPDLLQIKNLFSTKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           V+A SELRPDS VNR+           IIEKL+VSAP GE++LKV+KEIA+EH ++WDSS
Sbjct: 138 VTAASELRPDSSVNRA-----------IIEKLSVSAPSGEIRLKVLKEIAQEHSVEWDSS 197

Query: 183 STASEFSKTHEDLLGGPK-VVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
           ST +EFSK HEDLL G K V   AA SQ   + +S  PS P   A PV+    KQ  +  
Sbjct: 198 STEAEFSKKHEDLLAGSKQVCAEAAVSQSIIRQASIKPS-PSNGAKPVLLTNAKQASQHQ 257

Query: 243 HTLTRISNSV----SDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAA 302
                +S +     S+I+P  KN         K +T   PSDVLE+ARAAIASAE A AA
Sbjct: 258 QAPGPVSKAALLTSSEIEPSAKNCTAGSVSDIKTETTSRPSDVLERARAAIASAECAIAA 317

Query: 303 ARVAAELANVNLGAMKLEG 317
           AR AAEL NV  G+MKLEG
Sbjct: 318 ARAAAELVNVKFGSMKLEG 324

[Close]

BLAST of CmoCh04G021400 vs. TrEMBL
Match: A0A0B0MHH1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_21801 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.9e-97
Identity = 207/316 (65.51%), Postives = 243/316 (76.90%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRDLQLK+MRKEIAQFLQ GQEPIARIRVEHVIREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDLQLKNMRKEIAQFLQAGQEPIARIRVEHVIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPI+ESQK+CP ELREA+ASIIFAAPRCSD+PDLLQ+KNLFA KYGKEF
Sbjct: 78  LELFCEFVLARVPILESQKDCPPELREAVASIIFAAPRCSDVPDLLQIKNLFATKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           V A +ELRPDSGVNR+           IIEKL+VSAP GE++LKV+KEIA+E+ ++WDSS
Sbjct: 138 VIAATELRPDSGVNRA-----------IIEKLSVSAPSGEIRLKVLKEIAQEYSVEWDSS 197

Query: 183 STASEFSKTHEDLLGGPK-VVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
            T +EF+K +EDLL G K V   AA SQ PS+  +S  S+P   A  ++    +   + H
Sbjct: 198 GTEAEFNKKYEDLLAGSKQVCAEAAVSQAPSK-QASGKSSPSNGAKTILPADARPASQHH 257

Query: 243 HTLTRISN-SVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARV 302
              + +   + S+I+P  KN         K +T   PSDVLE+ARAAIASAERATAAAR 
Sbjct: 258 QVPSHVGKLTRSEIEPSVKNGTAGPISDIKTETNSRPSDVLERARAAIASAERATAAARA 317

Query: 303 AAELANVNLGAMKLEG 317
           AAEL NV  G++KL+G
Sbjct: 318 AAELVNVKFGSLKLQG 321

[Close]

BLAST of CmoCh04G021400 vs. TrEMBL
Match: A0A0D2NFC9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G191700 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.1e-96
Identity = 206/316 (65.19%), Postives = 240/316 (75.95%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRDLQLK+MRKEIAQFLQ GQEPIARIRVEHVIREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDLQLKNMRKEIAQFLQAGQEPIARIRVEHVIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPI+ESQK+CP ELREA+ASIIFAAPRCSD+PDLLQ+KNLFA KYGKEF
Sbjct: 78  LELFCEFVLARVPILESQKDCPPELREAVASIIFAAPRCSDVPDLLQIKNLFATKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           V A  ELRPDSGVNR+           IIEKL+VSAP GE++LKV+KEIA+E+ ++WDSS
Sbjct: 138 VIAAMELRPDSGVNRA-----------IIEKLSVSAPSGEIRLKVLKEIAQEYSVEWDSS 197

Query: 183 STASEFSKTHEDLLGGPK-VVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
            T +EF+K +EDLL G K V   AA SQ PS+  +S  S P   A  ++    +   + H
Sbjct: 198 GTEAEFNKKYEDLLAGSKQVCAEAAVSQAPSK-QASGKSLPSNGAKTILPTDARPASQHH 257

Query: 243 HTLTRISN-SVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARV 302
              + +S  + S+I+   KN         K +T   PSDVLE+ARAAIASAERATA AR 
Sbjct: 258 QVPSHMSKLTSSEIESSVKNGTAGPISDIKTETNSRPSDVLERARAAIASAERATAGARA 317

Query: 303 AAELANVNLGAMKLEG 317
           AAEL NV  G++KL+G
Sbjct: 318 AAELVNVKFGSLKLQG 321

[Close]

BLAST of CmoCh04G021400 vs. TrEMBL
Match: M5XDF0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008869mg PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95
Identity = 202/307 (65.80%), Postives = 242/307 (78.83%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCL+LAISR+KLLQNKRD+QLKHMRKEIAQFLQ GQE IARIRVEHVIREQ+IWAAYEI
Sbjct: 18  KTCLNLAISRMKLLQNKRDVQLKHMRKEIAQFLQAGQEAIARIRVEHVIREQDIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPIIESQ+ECP ELREAI+SIIFA+PRCS++PDLLQ+KNLF  KYGKEF
Sbjct: 78  LELFCEFVLARVPIIESQRECPPELREAISSIIFASPRCSEVPDLLQIKNLFTAKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSA SELRPDSGVNR+           IIEKL+VSAP GE +L+V+KEIA+E+ L+WDSS
Sbjct: 138 VSAASELRPDSGVNRT-----------IIEKLSVSAPSGEARLRVLKEIAQEYNLNWDSS 197

Query: 183 STASEFSKTHEDLLGGPKVVHGAAA-SQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
           +T +EFSKTHEDLLGG K V G AA SQ P++  S + S+P   AH +V+   KQEP+  
Sbjct: 198 NTEAEFSKTHEDLLGGSKHVSGGAAPSQAPAKQGSFS-SSPSNGAHSIVAADIKQEPKYL 257

Query: 243 HTLTRI----SNSVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAA 302
           H    +    ++  ++I+P   +        +K +TRP  S++LE+ARAAIASAERA+AA
Sbjct: 258 HAPRPLRETHTSYTNEIQPSINDDKAAAVSDTKRETRPKSSEILERARAAIASAERASAA 312

Query: 303 ARVAAEL 305
           AR AAEL
Sbjct: 318 ARSAAEL 312

[Close]

BLAST of CmoCh04G021400 vs. TAIR10
Match: AT1G25420.1 (AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 321.6 bits (823), Expect = 5.4e-88
Identity = 185/311 (59.49%), Postives = 222/311 (71.38%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KT L+LAI+R+KLLQNKRD+QLKHM+KEIA FLQ GQEPIARIRVEHVIRE N+WAAYEI
Sbjct: 18  KTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVEHVIREMNLWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEF+LARVPI+ES+KECP ELREAIASIIFAAPRCS++PDLLQ+KNLF  KYGKEF
Sbjct: 78  LELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLLQIKNLFGTKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           +   SELRPDSGVNR+           IIEKL+ ++P G  +LK++KEIA+E+ L+WDSS
Sbjct: 138 IMVASELRPDSGVNRT-----------IIEKLSPTSPSGAARLKMLKEIAQEYSLNWDSS 197

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECHH 242
           +T +EF K+HEDLLGG K +H           S S PS        V   VE    E   
Sbjct: 198 ATEAEFMKSHEDLLGGAKQIHR------QDGISESRPSQQGYGQSSVSREVESLPAEATQ 257

Query: 243 TLTRI--SNSVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARV 302
              ++   N VS   P  K   +   F +  DTR   +DV+E ARAA+ASA+RATAAAR 
Sbjct: 258 RFQKLQAQNPVSKSMPSSK---LTSAFQAPPDTRRNQTDVMEIARAALASADRATAAARA 308

Query: 303 AAELANVNLGA 312
           AA+L NV+ GA
Sbjct: 318 AAQLVNVSYGA 308

[Close]

BLAST of CmoCh04G021400 vs. TAIR10
Match: AT1G34220.1 (AT1G34220.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-62
Identity = 127/243 (52.26%), Postives = 169/243 (69.55%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KT L L I RIKL++N+R+ Q+K MR+EIA+ L+TGQE  ARIRVEH+IRE+ + AA EI
Sbjct: 18  KTLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVEHIIREEKMMAAQEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCE +  R+PIIE+Q+ECP++L+EAI+S+ FAAPRCSDL +L Q++ LF  KYGKEF
Sbjct: 78  LELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQQVQILFVSKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVE---FVS----------------SLSLAVIIEKLAVSAPPGEL 182
           V+A SEL+PDSGVNR  E   F++                S S+  ++E L+V AP  E 
Sbjct: 138 VAAASELKPDSGVNRKTESLIFIAWFSLVETRDLFMFLYFSNSILQLVELLSVRAPSPET 197

Query: 183 KLKVMKEIAKEHGLDWDSSSTASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPY 227
           KLK++KEIA+EH LDWD +ST ++  K+HEDLL GPK   G +   +P + +     T  
Sbjct: 198 KLKLLKEIAEEHELDWDPASTETDLFKSHEDLLDGPKQFGGGSKLPLPEEQNEKTNLTSL 257

[Close]

BLAST of CmoCh04G021400 vs. TAIR10
Match: AT4G35730.1 (AT4G35730.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-56
Identity = 113/216 (52.31%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KT   +A++RIKL++NKR + +K MR++IA  LQ+GQ+  ARIRVEHVIREQNI AA EI
Sbjct: 32  KTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVIREQNIQAANEI 91

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           +ELFCE +++R+ II  QK+CPV+L+E IAS+IFAAPRCS++P+L  L+++FA KYGK+F
Sbjct: 92  IELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLRDIFAKKYGKDF 151

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSA ++LRP  GVNR           ++I+KL+V  P GE KLK+MKEIAKE  +DWD++
Sbjct: 152 VSAATDLRPSCGVNR-----------MLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDTT 211

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSN 219
            T  E  K  E+ + GP+     +AS +P   ++ N
Sbjct: 212 ETEQELLKPQEESIDGPRKF--VSASSLPVNRAAIN 234

[Close]

BLAST of CmoCh04G021400 vs. TAIR10
Match: AT2G19710.1 (AT2G19710.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 121/334 (36.23%), Postives = 186/334 (55.69%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KT L +A SR+K+L+NK+++Q+K +R+E+AQ L++GQ P ARIRVEHV+RE+   AAYE+
Sbjct: 15  KTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVVREEKTVAAYEL 74

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           + ++CE ++ R+ +IESQK CP++L+EA+ S++FA+ R SD+P+L ++   F  KYGK+F
Sbjct: 75  IGIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTTKYGKDF 134

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
            ++  ELRPDSGV+R           +++EKL+  AP G  K+K++  IA+EH + W++ 
Sbjct: 135 STSAVELRPDSGVSR-----------LLVEKLSAKAPDGPTKVKILMAIAEEHNVVWEAQ 194

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPYGAAHPVV------------ 242
           S      K  E LL G      A++  + S  +S+    P   A   V            
Sbjct: 195 SFVESDPKDTE-LLNGANSFQPASSMNMDSSINSNKEQPPNIHAPATVNAHHGSSERHHS 254

Query: 243 ----------------SVVEKQEPECHHTLTRISNSVSDIKP--GPKNFDVKLEFASKLD 302
                           +V   +  + +H+  R S S  D      P +        +K  
Sbjct: 255 PENSYANGGRSSSRSNNVTSGKADDYYHSKARPSRSRPDEGECRNPNHGYENSSSRNKQK 314

Query: 303 TRPPPSDVLEKARAAIASAERATAAARVAAELAN 307
             P   D  + ARAA  +AERA+ AAR AAEL+N
Sbjct: 315 WEPEFVDSTDAARAAAEAAERASFAARAAAELSN 336

[Close]

BLAST of CmoCh04G021400 vs. TAIR10
Match: AT4G29440.1 (AT4G29440.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 175.6 bits (444), Expect = 4.8e-44
Identity = 111/321 (34.58%), Postives = 178/321 (55.45%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           K  L +A SR+K+L+NK+D Q+K +R+E+A  L++GQ   A+IRVEHV+RE+   AAYE+
Sbjct: 15  KIALQMAASRLKILKNKKDTQIKQLRRELAHLLESGQTQTAKIRVEHVVREEKTVAAYEL 74

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           + ++CE ++AR+ +I+SQK CP +L+EA+AS+++A+ R +D+ +L  +   F+ KYGK+F
Sbjct: 75  VGIYCELLVARLGVIDSQKTCPNDLKEAVASVLYASQRLTDVGELSDIVKHFSAKYGKDF 134

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSA   L+PDSGV+R           +++EKL+V AP G  K+K++ EIA +H + W++ 
Sbjct: 135 VSAAIGLQPDSGVSR-----------LLVEKLSVKAPDGPTKIKILTEIATQHNVTWEAE 194

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECHH 242
           S      K      G    V   A           N   P   A   V+V +        
Sbjct: 195 SLVESDPKETMSASGASSSVSQPATGIKSESSRIQNNQPPVFQAAATVNVSQNSYATDGR 254

Query: 243 TLTRISNSVSDIKPGPKNFDV-------KLEFASKLDTRPPPS----------DVLEKAR 302
           + +R++++  ++   P ++         +++     D  P             D    AR
Sbjct: 255 SSSRMTSTDFNVGKTPDHYHQDPKPSGDRVDGREHRDHNPGHGDTSPFETKFVDATSAAR 314

Query: 303 AAIASAERATAAARVAAELAN 307
           AA  SAERA+ AAR AAEL++
Sbjct: 315 AAAESAERASFAARRAAELSS 324

[Close]

BLAST of CmoCh04G021400 vs. NCBI nr
Match: gi|659131631|ref|XP_008465781.1| (PREDICTED: IST1 homolog [Cucumis melo])

HSP 1 Score: 473.4 bits (1217), Expect = 3.2e-130
Identity = 262/321 (81.62%), Postives = 278/321 (86.60%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRDLQLK MRKEIAQFLQTGQE IARIRVEHVIREQNIW AYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDLQLKLMRKEIAQFLQTGQEQIARIRVEHVIREQNIWDAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPIIESQ+ECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF
Sbjct: 78  LELFCEFVLARVPIIESQRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSAISELRPDSGVNRS           IIEKL+VSAPPGELKLKVMKEIAK+HGL+WDSS
Sbjct: 138 VSAISELRPDSGVNRS-----------IIEKLSVSAPPGELKLKVMKEIAKQHGLNWDSS 197

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECHH 242
           ST SEFSKTHEDLLGGPK V GAA SQ P Q+S  NPS  YG+A    S + K+EPE HH
Sbjct: 198 STVSEFSKTHEDLLGGPKGVQGAAVSQTP-QHSFLNPSISYGSALLAASPMGKKEPEHHH 257

Query: 243 TLTRISNSVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARVAA 302
            +  I+ + ++IKP PK+FDVK E A+KLDTRPPPSDVLEKA+AAIASAERATAAARVAA
Sbjct: 258 AVGPINYNTNEIKPEPKSFDVKPEVAAKLDTRPPPSDVLEKAKAAIASAERATAAARVAA 317

Query: 303 ELANVNLGAMKLEGGGQASEC 324
           ELANVNLG MK E GGQ SEC
Sbjct: 318 ELANVNLGTMKFE-GGQTSEC 325

[Close]

BLAST of CmoCh04G021400 vs. NCBI nr
Match: gi|449445148|ref|XP_004140335.1| (PREDICTED: IST1 homolog [Cucumis sativus])

HSP 1 Score: 466.8 bits (1200), Expect = 3.0e-128
Identity = 261/321 (81.31%), Postives = 277/321 (86.29%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRD+QLK MRKEIAQFLQTGQE IARIRVEHVIREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDMQLKLMRKEIAQFLQTGQEQIARIRVEHVIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPIIESQ+ECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF
Sbjct: 78  LELFCEFVLARVPIIESQRECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSAISELRPDSGVNRS           IIEKL+VSAPPGELKLKVMKEIAKEHGL+WDSS
Sbjct: 138 VSAISELRPDSGVNRS-----------IIEKLSVSAPPGELKLKVMKEIAKEHGLNWDSS 197

Query: 183 STASEFSKTHEDLLGGPKVVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECHH 242
           STASEFSKTHEDLLGGPK V G+A SQ P    S NPS  + +AH   S + K+EPE HH
Sbjct: 198 STASEFSKTHEDLLGGPKGVQGSAVSQTPQH--SLNPSISHVSAHLAASPMGKKEPEHHH 257

Query: 243 TLTRISNSVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARVAA 302
            +  IS + ++IKP PK+FDVK E A+KLDTR PPSDVLEKA+AAIASAERATAAARVAA
Sbjct: 258 AVGPISYNTNEIKPEPKSFDVKPEVAAKLDTR-PPSDVLEKAKAAIASAERATAAARVAA 317

Query: 303 ELANVNLGAMKLEGGGQASEC 324
           ELANVNLG MK E GGQ SEC
Sbjct: 318 ELANVNLGTMKFE-GGQTSEC 323

[Close]

BLAST of CmoCh04G021400 vs. NCBI nr
Match: gi|590693400|ref|XP_007044322.1| (Regulator of Vps4 activity in the MVB pathway protein [Theobroma cacao])

HSP 1 Score: 369.4 bits (947), Expect = 6.4e-99
Identity = 214/319 (67.08%), Postives = 241/319 (75.55%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQ GQEPIARIRVEH+IREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQAGQEPIARIRVEHIIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPI+ESQKECP ELREA+ASIIFAAPRCSD+PDLLQ+KNLF+ KYGKEF
Sbjct: 78  LELFCEFVLARVPILESQKECPSELREAVASIIFAAPRCSDVPDLLQIKNLFSTKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           V+A SELRPDS VNR+           IIEKL+VSAP GE++LKV+KEIA+EH ++WDSS
Sbjct: 138 VTAASELRPDSSVNRA-----------IIEKLSVSAPSGEIRLKVLKEIAQEHSVEWDSS 197

Query: 183 STASEFSKTHEDLLGGPK-VVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
           ST +EFSK HEDLL G K V   AA SQ   + +S  PS P   A PV+    KQ  +  
Sbjct: 198 STEAEFSKKHEDLLAGSKQVCAEAAVSQSIIRQASIKPS-PSNGAKPVLLTNAKQASQHQ 257

Query: 243 HTLTRISNSV----SDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAA 302
                +S +     S+I+P  KN         K +T   PSDVLE+ARAAIASAE A AA
Sbjct: 258 QAPGPVSKAALLTSSEIEPSAKNCTAGSVSDIKTETTSRPSDVLERARAAIASAECAIAA 317

Query: 303 ARVAAELANVNLGAMKLEG 317
           AR AAEL NV  G+MKLEG
Sbjct: 318 ARAAAELVNVKFGSMKLEG 324

[Close]

BLAST of CmoCh04G021400 vs. NCBI nr
Match: gi|658048721|ref|XP_008360045.1| (PREDICTED: IST1 homolog [Malus domestica])

HSP 1 Score: 364.8 bits (935), Expect = 1.6e-97
Identity = 205/306 (66.99%), Postives = 243/306 (79.41%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCL+L ISRIKLLQNKRD+QLK+MRKEIAQFLQ GQE IARIRVEHVIREQNIWAAYEI
Sbjct: 18  KTCLNLGISRIKLLQNKRDVQLKNMRKEIAQFLQAGQEAIARIRVEHVIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPIIESQ+ECP ELREAI+SIIFAAPRCSD+PDL+Q+ NLF  KYGKEF
Sbjct: 78  LELFCEFVLARVPIIESQRECPTELREAISSIIFAAPRCSDVPDLMQITNLFXAKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           VSA+SELRPDSGVNR+           IIEKL+VSAP GE +LKV+KEIAKE+ L+WDSS
Sbjct: 138 VSAVSELRPDSGVNRT-----------IIEKLSVSAPSGEARLKVLKEIAKEYKLNWDSS 197

Query: 183 STASEFSKTHEDLLGGPKVVHGAAA-SQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
            T +EFSK HEDLLGGPK + GAAA SQ P+++ + + S P   AH +V    KQEP+  
Sbjct: 198 DTEAEFSKKHEDLLGGPKHISGAAAPSQXPAKHITFS-SPPANGAHSIVPADIKQEPQYL 257

Query: 243 H---TLTRISNSVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAA 302
           H   +L++  +  ++I+P   +   +    +K +TRP  SD+LE+ARAAIASAERA+AAA
Sbjct: 258 HAPRSLSKTPSFXNEIQPSANDDXARPVNETKGETRPQSSDILERARAAIASAERASAAA 311

Query: 303 RVAAEL 305
           R AAEL
Sbjct: 318 RQAAEL 311

[Close]

BLAST of CmoCh04G021400 vs. NCBI nr
Match: gi|728814754|gb|KHG01623.1| (Uncharacterized protein F383_21801 [Gossypium arboreum])

HSP 1 Score: 364.0 bits (933), Expect = 2.7e-97
Identity = 207/316 (65.51%), Postives = 243/316 (76.90%), Query Frame = 1


Query: 3   KTCLSLAISRIKLLQNKRDLQLKHMRKEIAQFLQTGQEPIARIRVEHVIREQNIWAAYEI 62
           KTCLSLAISRIKLLQNKRDLQLK+MRKEIAQFLQ GQEPIARIRVEHVIREQNIWAAYEI
Sbjct: 18  KTCLSLAISRIKLLQNKRDLQLKNMRKEIAQFLQAGQEPIARIRVEHVIREQNIWAAYEI 77

Query: 63  LELFCEFVLARVPIIESQKECPVELREAIASIIFAAPRCSDLPDLLQLKNLFAVKYGKEF 122
           LELFCEFVLARVPI+ESQK+CP ELREA+ASIIFAAPRCSD+PDLLQ+KNLFA KYGKEF
Sbjct: 78  LELFCEFVLARVPILESQKDCPPELREAVASIIFAAPRCSDVPDLLQIKNLFATKYGKEF 137

Query: 123 VSAISELRPDSGVNRSVEFVSSLSLAVIIEKLAVSAPPGELKLKVMKEIAKEHGLDWDSS 182
           V A +ELRPDSGVNR+           IIEKL+VSAP GE++LKV+KEIA+E+ ++WDSS
Sbjct: 138 VIAATELRPDSGVNRA-----------IIEKLSVSAPSGEIRLKVLKEIAQEYSVEWDSS 197

Query: 183 STASEFSKTHEDLLGGPK-VVHGAAASQVPSQYSSSNPSTPYGAAHPVVSVVEKQEPECH 242
            T +EF+K +EDLL G K V   AA SQ PS+  +S  S+P   A  ++    +   + H
Sbjct: 198 GTEAEFNKKYEDLLAGSKQVCAEAAVSQAPSK-QASGKSSPSNGAKTILPADARPASQHH 257

Query: 243 HTLTRISN-SVSDIKPGPKNFDVKLEFASKLDTRPPPSDVLEKARAAIASAERATAAARV 302
              + +   + S+I+P  KN         K +T   PSDVLE+ARAAIASAERATAAAR 
Sbjct: 258 QVPSHVGKLTRSEIEPSVKNGTAGPISDIKTETNSRPSDVLERARAAIASAERATAAARA 317

Query: 303 AAELANVNLGAMKLEG 317
           AAEL NV  G++KL+G
Sbjct: 318 AAELVNVKFGSLKLQG 321

The following BLAST results are available for this feature:

BLAST of CmoCh04G021400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IST1_BOVIN	1.6e-20	36.87	IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1	[more]
IST1_HUMAN	1.6e-20	36.87	IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1	[more]
IST1_MOUSE	1.6e-20	36.87	IST1 homolog OS=Mus musculus GN=Ist1 PE=1 SV=1	[more]
IST1_RAT	1.6e-20	36.87	IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1	[more]
IST1_PONAB	1.0e-19	36.31	IST1 homolog OS=Pongo abelii GN=IST1 PE=2 SV=1	[more]

BLAST of CmoCh04G021400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMU2_CUCSA	2.1e-128	81.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G367190 PE=4 SV=1	[more]
A0A061ED43_THECC	4.5e-99	67.08	Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao GN=TCM_...	[more]
A0A0B0MHH1_GOSAR	1.9e-97	65.51	Uncharacterized protein OS=Gossypium arboreum GN=F383_21801 PE=4 SV=1	[more]
A0A0D2NFC9_GOSRA	6.1e-96	65.19	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G191700 PE=4 SV=1	[more]
M5XDF0_PRUPE	1.4e-95	65.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008869mg PE=4 SV=1	[more]

BLAST of CmoCh04G021400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G25420.1	5.4e-88	59.49	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G34220.1	3.0e-62	52.26	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT4G35730.1	4.2e-56	52.31	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT2G19710.1	1.4e-48	36.23	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT4G29440.1	4.8e-44	34.58	Regulator of Vps4 activity in the MVB pathway protein	[more]

BLAST of CmoCh04G021400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131631\|ref\|XP_008465781.1\|	3.2e-130	81.62	PREDICTED: IST1 homolog [Cucumis melo]	[more]
gi\|449445148\|ref\|XP_004140335.1\|	3.0e-128	81.31	PREDICTED: IST1 homolog [Cucumis sativus]	[more]
gi\|590693400\|ref\|XP_007044322.1\|	6.4e-99	67.08	Regulator of Vps4 activity in the MVB pathway protein [Theobroma cacao]	[more]
gi\|658048721\|ref\|XP_008360045.1\|	1.6e-97	66.99	PREDICTED: IST1 homolog [Malus domestica]	[more]
gi\|728814754\|gb\|KHG01623.1\|	2.7e-97	65.51	Uncharacterized protein F383_21801 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005061	Ist1

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0048573	photoperiodism, flowering
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021400.1	CmoCh04G021400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	UNCHARACTERIZED DUF292	coord: 3..307 score: 3.1E
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 3..177 score: 6.0
None	No IPR available	PANTHER	PTHR12161:SF21	REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN	coord: 3..307 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021400	CmaCh04G020370	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G021400	Lsi04G002670	Bottle gourd (USVL1VR-Ls)	cmolsiB677
CmoCh04G021400	Lsi09G010320	Bottle gourd (USVL1VR-Ls)	cmolsiB612
CmoCh04G021400	Cp4.1LG01g17770	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021400	MELO3C012232.2	Melon (DHL92) v3.6.1	cmomedB744
CmoCh04G021400	Cla97C05G104720	Watermelon (97103) v2	cmowmbB740
CmoCh04G021400	Bhi07G001121	Wax gourd	cmowgoB0909
CmoCh04G021400	CsGy5G024600	Cucumber (Gy14) v2	cgybcmoB637

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021400	Watermelon (97103) v2	cmowmbB680
CmoCh04G021400	Wax gourd	cmowgoB0827
CmoCh04G021400	Cucurbita moschata (Rifu)	cmocmoB270
CmoCh04G021400	Cucurbita pepo (Zucchini)	cmocpeB682
CmoCh04G021400	Bottle gourd (USVL1VR-Ls)	cmolsiB613
CmoCh04G021400	Melon (DHL92) v3.6.1	cmomedB719
CmoCh04G021400	Silver-seed gourd	carcmoB0896