Lsi09G010070 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G010070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Thioredoxin superfamily protein
Location	chr09 : 13755009 .. 13756221 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGTATTATGCTATGATTTTATTCTAAACCCATTTCTCAAACAAATAGGTGAGTTCGTAATTTGTGCATCTTTGTAGAAATGGCGCTGCAACATACACTAGGTTTACTGTCTCTGGTTTTGCCTTCTTCTAATTGCAAATTCGAAGGGGTTGCTTTATTTGCGCCAACGAATTCCCAAACCAGCAACGCTCTCTCTTCATGGAGGTTGGAGTCTTCTTATCCTTCATCCATCTCTTTGATGAAGTTCCCTTTCCTGGTAATGTCATTCTCTAATCCATTTTCTTATAGTGTGTTTGGCATATGGTATAACTTCTTTACTGATTTTAGATGCTTAGAAGTGTTTTACCTAAGATTTGTAGTTGATTTCAAAACTTCTCATAAGAAAGATTTGAAAGCTGATTCTCCAAGTGATTTTAGAGTGGTTGACTGGGAATCATTTTTTCACTTTATGGTAATTTGATATTTATATTTTAGACATGGTGCAACAACATATTTGTAAATAAATCACTTTAAGAGAATGTAAATAAACAAATAATTTTTTGAAACAGTGCTTAAACTAAAATGTATGCCCAAGTCACCCTTAGTGTTCGTTTCTTGTTACCTGGGGAAACTAACTGTGAAGCACTTCATGTTATGATCTGTAGGGTAGTTGTTTTAGAAGCAGCACTCTAAGGGCCTATAAAACTGCAGGGTCACTCAGGTCTGGTGATGGAAAGAAGAAGAAAGGACAAGCAGATATGGACTCTGATGAGGAAGATGATTCTTCTTCAACAAAGAAGCAAGACCTTGAGCTTATGGATGCCGAGGAGAGACGGGAATGGAGGGAGAAGATTAGGGAAGTGATTGATATGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAAGGAAAATGCAAAAACTTCTTGCTGACTATCCTCTTGTTGTGGAGGAGGAGGATCCTGATTGGCCTGAGGATGCTGACGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACCATCAAGAATAAGAAAAAGGATGATGATAAATATGATGACGATAAAGATGACACTGGTGATGAAATAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTGCTGAATGGGAGGAGGCCGTATTTAAAGATATTAGTCCTCTAATCATTTTTGTACATAATCGCTACAAAAGGTATGCTCTTTGA

mRNA sequence

GGTTGTATTATGCTATGATTTTATTCTAAACCCATTTCTCAAACAAATAGGTGAGTTCGTAATTTGTGCATCTTTGTAGAAATGGCGCTGCAACATACACTAGGTTTACTGTCTCTGGTTTTGCCTTCTTCTAATTGCAAATTCGAAGGGGTTGCTTTATTTGCGCCAACGAATTCCCAAACCAGCAACGCTCTCTCTTCATGGAGGTTGGAGTCTTCTTATCCTTCATCCATCTCTTTGATGAAGTTCCCTTTCCTGGGTAGTTGTTTTAGAAGCAGCACTCTAAGGGCCTATAAAACTGCAGGGTCACTCAGGTCTGGTGATGGAAAGAAGAAGAAAGGACAAGCAGATATGGACTCTGATGAGGAAGATGATTCTTCTTCAACAAAGAAGCAAGACCTTGAGCTTATGGATGCCGAGGAGAGACGGGAATGGAGGGAGAAGATTAGGGAAGTGATTGATATGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAAGGAAAATGCAAAAACTTCTTGCTGACTATCCTCTTGTTGTGGAGGAGGAGGATCCTGATTGGCCTGAGGATGCTGACGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACCATCAAGAATAAGAAAAAGGATGATGATAAATATGATGACGATAAAGATGACACTGGTGATGAAATAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTGCTGAATGGGAGGAGGCCGTATTTAAAGATATTAGTCCTCTAATCATTTTTGTACATAATCGCTACAAAAGGTATGCTCTTTGA

Coding sequence (CDS)

ATGGCGCTGCAACATACACTAGGTTTACTGTCTCTGGTTTTGCCTTCTTCTAATTGCAAATTCGAAGGGGTTGCTTTATTTGCGCCAACGAATTCCCAAACCAGCAACGCTCTCTCTTCATGGAGGTTGGAGTCTTCTTATCCTTCATCCATCTCTTTGATGAAGTTCCCTTTCCTGGGTAGTTGTTTTAGAAGCAGCACTCTAAGGGCCTATAAAACTGCAGGGTCACTCAGGTCTGGTGATGGAAAGAAGAAGAAAGGACAAGCAGATATGGACTCTGATGAGGAAGATGATTCTTCTTCAACAAAGAAGCAAGACCTTGAGCTTATGGATGCCGAGGAGAGACGGGAATGGAGGGAGAAGATTAGGGAAGTGATTGATATGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAAGGAAAATGCAAAAACTTCTTGCTGACTATCCTCTTGTTGTGGAGGAGGAGGATCCTGATTGGCCTGAGGATGCTGACGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACCATCAAGAATAAGAAAAAGGATGATGATAAATATGATGACGATAAAGATGACACTGGTGATGAAATAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTGCTGAATGGGAGGAGGCCGTATTTAAAGATATTAGTCCTCTAATCATTTTTGTACATAATCGCTACAAAAGGTATGCTCTTTGA

Protein sequence

MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLESSYPSSISLMKFPFLGSCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLELMDAEERREWREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIFVHNRYKRYAL

Homology

[Close]

BLAST of Lsi09G010070 vs. TrEMBL
Match: A0A0A0LK68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123060 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.3e-109
Identity = 208/244 (85.25%), Postives = 222/244 (90.98%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLESSYPSSISLMKFPFLG 60
           MALQH+LGL SL+LPSSNCKFEG A F  T+SQ +N  SSW L+SSYPSSIS M FPF G
Sbjct: 1   MALQHSLGLPSLLLPSSNCKFEGGASFVSTSSQITNLFSSWTLDSSYPSSISFMNFPFRG 60

Query: 61  SCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLELMDAEERREWRE 120
            CFRSS+LRAY+TAGS+R GDGKKKK QA MDSDEEDDSSS K+ D+ELMDAEERREWRE
Sbjct: 61  GCFRSSSLRAYRTAGSIRPGDGKKKKEQAGMDSDEEDDSSSAKEPDVELMDAEERREWRE 120

Query: 121 KIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK 180
           KIR+VID NPNVEEEIDNMERR KMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK
Sbjct: 121 KIRKVIDTNPNVEEEIDNMERRIKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK 180

Query: 181 ITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIFVHN 240
           ITIKNKKK DDKYDDDKDDT +E+VWQDDNYIRPIKDITI+EWEEAVFKDISPLIIFVHN
Sbjct: 181 ITIKNKKK-DDKYDDDKDDTDNEVVWQDDNYIRPIKDITISEWEEAVFKDISPLIIFVHN 240

Query: 241 RYKR 245
           RYKR
Sbjct: 241 RYKR 243

[Close]

BLAST of Lsi09G010070 vs. TrEMBL
Match: B9T531_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211530 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.5e-67
Identity = 147/249 (59.04%), Postives = 182/249 (73.09%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLE--SSYPSSISLMKFPF 60
           MALQHTLG    + P    KF+     A T+S +    S+  +   SS+ S+   +    
Sbjct: 1   MALQHTLGFQKFLSPVKEYKFKDFPSAAGTSSHSEVTGSNTEISCCSSHSSNFIRVPLQL 60

Query: 61  LGSCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLE---LMDAEER 120
            G  FR+S +RA +TA + +SGDGKKKK +   DSDE+DDS STKK ++     MDA ER
Sbjct: 61  QGGRFRNSGVRASRTAETFKSGDGKKKKWEESSDSDEDDDSFSTKKGEVNDPYQMDAAER 120

Query: 121 REWREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLG 180
           REWR  IREVID +P++EEE++  +++ +MQKLLADYPLVVEE+DPDWPED+DGWGFNLG
Sbjct: 121 REWRRNIREVIDKHPDIEEELNAEDKKIRMQKLLADYPLVVEEDDPDWPEDSDGWGFNLG 180

Query: 181 QFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLI 240
           QFF+KITIKNKKKDD   DD+  D+ +EIVWQDDNYIRPIKDIT A+WEE VFKDI+PLI
Sbjct: 181 QFFNKITIKNKKKDD---DDENYDSENEIVWQDDNYIRPIKDITTADWEETVFKDINPLI 240

Query: 241 IFVHNRYKR 245
           I VHNRYKR
Sbjct: 241 ILVHNRYKR 246

[Close]

BLAST of Lsi09G010070 vs. TrEMBL
Match: A0A067K396_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19256 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-62
Identity = 149/258 (57.75%), Postives = 178/258 (68.99%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQT-----SNALSSWRLESSYPSSISLMK 60
           MALQHTL    L  P    KF+     A  NS +     +N +SS    SS  S    + 
Sbjct: 1   MALQHTLRFQKLFSPIHEYKFKDFPSAAGINSHSEAKRRNNGVSS--CSSSRSSKFLKVP 60

Query: 61  FPFLGSCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEED------DSSSTKKQDLE- 120
               G  FR+  +RA ++  +L S DGKKK+ +   D+D++D      D+S+ KK ++  
Sbjct: 61  LQLQGGGFRTVGVRASRSVKTLSSNDGKKKRWEESSDTDDDDYEDSDDDNSTGKKSEVND 120

Query: 121 --LMDAEERREWREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPED 180
             LMDAEERREWR KIREVID + +VEEE+D  E++ KMQKLLADYPLVV E+DPDWPED
Sbjct: 121 PYLMDAEERREWRRKIREVIDKHQDVEEELDLEEKKIKMQKLLADYPLVVAEDDPDWPED 180

Query: 181 ADGWGFNLGQFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEA 240
           ADGWGFNLGQFF+KITIKNKKKDD   DD+  D+ +EIVWQDDNYIRPIKDIT AEWEE 
Sbjct: 181 ADGWGFNLGQFFNKITIKNKKKDD---DDENYDSENEIVWQDDNYIRPIKDITTAEWEET 240

Query: 241 VFKDISPLIIFVHNRYKR 245
           VFKDISPLII VHNRYKR
Sbjct: 241 VFKDISPLIILVHNRYKR 253

[Close]

BLAST of Lsi09G010070 vs. TrEMBL
Match: V4VQL2_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024256mg PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.0e-58
Identity = 139/253 (54.94%), Postives = 175/253 (69.17%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEG-----VALFAPTNSQTSNALSSWRLESSYPSSISLMK 60
           MALQHT+    L  P    + +      V +  P   ++S+ +SS R+E S  SS +++K
Sbjct: 1   MALQHTMTFECLNSPLKGNRLKSFPLNSVKVSRPNEERSSSWVSSSRMECSAFSS-NIVK 60

Query: 61  FPFLGSCFRSSTL-RAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLE---LMD 120
            P     FR + + R+       R G G+     +D D +++DD  S++K D+E   LMD
Sbjct: 61  LPLQAVSFRRNIIVRSLVEKLGKRGGGGES----SDTDDEDDDDDDSSRKMDVEDDPLMD 120

Query: 121 AEERREWREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWG 180
            EERREWR KIREVI   P+VEEE D +E+++KMQKLLADYPLV+EE+DPDWPEDADGWG
Sbjct: 121 PEERREWRRKIREVIAQCPDVEEESDPIEKKKKMQKLLADYPLVMEEDDPDWPEDADGWG 180

Query: 181 FNLGQFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDI 240
           F+L QFFDKITIKN KKD+   DD+  D+ +EIVWQDDNYIRPIKDI  AEWEEAVFKDI
Sbjct: 181 FSLSQFFDKITIKNVKKDE---DDENYDSENEIVWQDDNYIRPIKDIKTAEWEEAVFKDI 240

Query: 241 SPLIIFVHNRYKR 245
           SPLI+ VHNRYKR
Sbjct: 241 SPLIVLVHNRYKR 245

[Close]

BLAST of Lsi09G010070 vs. TrEMBL
Match: M1C8A1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024105 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55
Identity = 132/249 (53.01%), Postives = 164/249 (65.86%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLP-SSNCKFEGVALFAPT----NSQTSNALSSWRLESSYPSSISLMK 60
           M LQH+L L  L  P    C     ++F       N   S+ALSS +L +  PS     +
Sbjct: 1   MELQHSLRLQLLAPPLQEKCLRSSPSVFGIVPQWRNKLRSSALSSLKLNNFGPSVPKFWR 60

Query: 61  FPFLGSCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLELMDAEER 120
              +    R    +A K    L+ G+G++  G    D  E D     K+ D   MD +ER
Sbjct: 61  SQLMVHGLRQKGSKASKLEELLKFGNGEEDDG----DESESDSDGGPKRDDYFHMDEDER 120

Query: 121 REWREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLG 180
           REWR KIR+VI M+P+VEEE+D +ERR+KMQKLLADYPLVV+EEDPDWPEDADG GFNL 
Sbjct: 121 REWRRKIRDVIKMSPDVEEEVDPVERRQKMQKLLADYPLVVDEEDPDWPEDADGRGFNLD 180

Query: 181 QFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLI 240
           QFF+KI+IKN KKDDD+ DDD     +E+VWQDD+YIRP+KD+T AEWEE V+KDISPLI
Sbjct: 181 QFFNKISIKNVKKDDDENDDD-----NELVWQDDDYIRPVKDLTTAEWEETVYKDISPLI 240

Query: 241 IFVHNRYKR 245
           + VHNRYKR
Sbjct: 241 VLVHNRYKR 240

[Close]

BLAST of Lsi09G010070 vs. TAIR10
Match: AT2G31840.1 (AT2G31840.1 Thioredoxin superfamily protein)

HSP 1 Score: 207.6 bits (527), Expect = 8.7e-54
Identity = 112/172 (65.12%), Postives = 134/172 (77.91%), Query Frame = 1


Query: 82  GKKKKGQADMDSDEEDDSSSTKKQ-----DLELMDAEERREWREKIREVIDMNPNVEE-- 141
           GKK   + + DSD ED+    K++     +  L D  ERREWR+ IREVID +P++EE  
Sbjct: 72  GKKVWRKKEEDSDSEDEEDEVKEETFGGKEASLDDPVERREWRKTIREVIDKHPDIEEDE 131

Query: 142 EIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKK--DDDK 201
           EID +E+RRKMQKLLADYPLVV EEDP+WPEDADGWGF+  QFF+KITIKN+KK  +DD 
Sbjct: 132 EIDMVEKRRKMQKLLADYPLVVNEEDPNWPEDADGWGFSFNQFFNKITIKNEKKEEEDDD 191

Query: 202 YDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIFVHNRYKR 245
            D + DD+  EIVWQDDNYIRPIKD+T AEWEEAVFKDISPL++ VHNRYKR
Sbjct: 192 EDSEGDDSEKEIVWQDDNYIRPIKDLTTAEWEEAVFKDISPLMVLVHNRYKR 243

[Close]

BLAST of Lsi09G010070 vs. TAIR10
Match: AT4G28590.1 (AT4G28590.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 51/163 (31.29%), Postives = 72/163 (44.17%), Query Frame = 1


Query: 83  KKKKGQADMDSDEEDDSSSTKKQDLELMDAEERREWREKIREVIDMNPNVEEEIDNMERR 142
           K K+G+       ED   S+ ++    +  +    +  K +     +  V+EE +  E  
Sbjct: 93  KSKRGRRSEADAVEDYVRSSLERTFSTIKEQNPEVFENKEKANFIKDRGVDEEEEEEEE- 152

Query: 143 RKMQKLLADYPLVVEEEDPDWPEDAD-GWGFNLGQFFDKITIKNKKKDDDKYDDDKDDTG 202
                      +VVEEEDPDWP D D GWG    ++FD   IKN   DD          G
Sbjct: 153 -----------MVVEEEDPDWPVDTDVGWGIKASEYFDTHPIKNVVGDD----------G 212

Query: 203 DEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIFVHNRYKR 245
            EI W+ +     +K+I   EWE   F   SPL++ V  RYKR
Sbjct: 213 SEIDWEGEIDDSWVKEINCLEWESFAFHP-SPLVVLVFERYKR 232

[Close]

BLAST of Lsi09G010070 vs. NCBI nr
Match: gi|659082090|ref|XP_008441666.1| (PREDICTED: uncharacterized protein LOC103485750 isoform X1 [Cucumis melo])

HSP 1 Score: 414.5 bits (1064), Expect = 1.3e-112
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLESSYPSSISLMKFPFLG 60
           MALQHTLGLLSL LPSSNCKFEG ALF  T+S T+N LSSW LESSYPSSIS MKFPF G
Sbjct: 1   MALQHTLGLLSLALPSSNCKFEGGALFVSTSSHTTNLLSSWTLESSYPSSISFMKFPFRG 60

Query: 61  SCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLELMDAEERREWRE 120
           SCFRSSTLRAY+TAGS++ GDGKKKKGQA MDSDEEDDSSS K+ D E MDAEER+EWRE
Sbjct: 61  SCFRSSTLRAYRTAGSIKPGDGKKKKGQAGMDSDEEDDSSSAKQLDAEPMDAEERQEWRE 120

Query: 121 KIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK 180
           KIR+VIDMNPNVEEEIDNMER+RKMQKLLA+YPLVVEEEDPDWPEDADGWGFNLGQFFDK
Sbjct: 121 KIRKVIDMNPNVEEEIDNMERKRKMQKLLAEYPLVVEEEDPDWPEDADGWGFNLGQFFDK 180

Query: 181 ITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIFVHN 240
           ITIKNKKK D+K+DDDKDDT +EIVWQDDNYIRPIKDITI+EWEEAVFKDISPLIIFVHN
Sbjct: 181 ITIKNKKK-DNKFDDDKDDTDNEIVWQDDNYIRPIKDITISEWEEAVFKDISPLIIFVHN 240

Query: 241 RYKR 245
           RYKR
Sbjct: 241 RYKR 243

[Close]

BLAST of Lsi09G010070 vs. NCBI nr
Match: gi|449442351|ref|XP_004138945.1| (PREDICTED: uncharacterized protein LOC101210591 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 1.8e-109
Identity = 208/244 (85.25%), Postives = 222/244 (90.98%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLESSYPSSISLMKFPFLG 60
           MALQH+LGL SL+LPSSNCKFEG A F  T+SQ +N  SSW L+SSYPSSIS M FPF G
Sbjct: 1   MALQHSLGLPSLLLPSSNCKFEGGASFVSTSSQITNLFSSWTLDSSYPSSISFMNFPFRG 60

Query: 61  SCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLELMDAEERREWRE 120
            CFRSS+LRAY+TAGS+R GDGKKKK QA MDSDEEDDSSS K+ D+ELMDAEERREWRE
Sbjct: 61  GCFRSSSLRAYRTAGSIRPGDGKKKKEQAGMDSDEEDDSSSAKEPDVELMDAEERREWRE 120

Query: 121 KIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK 180
           KIR+VID NPNVEEEIDNMERR KMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK
Sbjct: 121 KIRKVIDTNPNVEEEIDNMERRIKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDK 180

Query: 181 ITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIFVHN 240
           ITIKNKKK DDKYDDDKDDT +E+VWQDDNYIRPIKDITI+EWEEAVFKDISPLIIFVHN
Sbjct: 181 ITIKNKKK-DDKYDDDKDDTDNEVVWQDDNYIRPIKDITISEWEEAVFKDISPLIIFVHN 240

Query: 241 RYKR 245
           RYKR
Sbjct: 241 RYKR 243

[Close]

BLAST of Lsi09G010070 vs. NCBI nr
Match: gi|659082092|ref|XP_008441667.1| (PREDICTED: uncharacterized protein LOC103485750 isoform X2 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 7.4e-71
Identity = 139/154 (90.26%), Postives = 148/154 (96.10%), Query Frame = 1


Query: 91  MDSDEEDDSSSTKKQDLELMDAEERREWREKIREVIDMNPNVEEEIDNMERRRKMQKLLA 150
           MDSDEEDDSSS K+ D E MDAEER+EWREKIR+VIDMNPNVEEEIDNMER+RKMQKLLA
Sbjct: 1   MDSDEEDDSSSAKQLDAEPMDAEERQEWREKIRKVIDMNPNVEEEIDNMERKRKMQKLLA 60

Query: 151 DYPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDN 210
           +YPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKK D+K+DDDKDDT +EIVWQDDN
Sbjct: 61  EYPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKK-DNKFDDDKDDTDNEIVWQDDN 120

Query: 211 YIRPIKDITIAEWEEAVFKDISPLIIFVHNRYKR 245
           YIRPIKDITI+EWEEAVFKDISPLIIFVHNRYKR
Sbjct: 121 YIRPIKDITISEWEEAVFKDISPLIIFVHNRYKR 153

[Close]

BLAST of Lsi09G010070 vs. NCBI nr
Match: gi|1000939250|ref|XP_015583367.1| (PREDICTED: uncharacterized protein LOC8261697 isoform X2 [Ricinus communis])

HSP 1 Score: 266.9 bits (681), Expect = 3.4e-68
Identity = 146/247 (59.11%), Postives = 181/247 (73.28%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLESSYPSSISLMKFPFLG 60
           MALQHTLG    + P    KF+     A T+S +    S+  +      S + ++ P  G
Sbjct: 55  MALQHTLGFQKFLSPVKEYKFKDFPSAAGTSSHSEVTGSNTEISCCSSHSSNFIRVPLQG 114

Query: 61  SCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLE---LMDAEERRE 120
             FR+S +RA +TA + +SGDGKKKK +   DSDE+DDS STKK ++     MDA ERRE
Sbjct: 115 GRFRNSGVRASRTAETFKSGDGKKKKWEESSDSDEDDDSFSTKKGEVNDPYQMDAAERRE 174

Query: 121 WREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQF 180
           WR  IREVID +P++EEE++  +++ +MQKLLADYPLVVEE+DPDWPED+DGWGFNLGQF
Sbjct: 175 WRRNIREVIDKHPDIEEELNAEDKKIRMQKLLADYPLVVEEDDPDWPEDSDGWGFNLGQF 234

Query: 181 FDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLIIF 240
           F+KITIKNKKKDD   DD+  D+ +EIVWQDDNYIRPIKDIT A+WEE VFKDI+PLII 
Sbjct: 235 FNKITIKNKKKDD---DDENYDSENEIVWQDDNYIRPIKDITTADWEETVFKDINPLIIL 294

Query: 241 VHNRYKR 245
           VHNRYKR
Sbjct: 295 VHNRYKR 298

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BLAST of Lsi09G010070 vs. NCBI nr
Match: gi|1000939252|ref|XP_015583368.1| (PREDICTED: uncharacterized protein LOC8261697 isoform X3 [Ricinus communis])

HSP 1 Score: 263.1 bits (671), Expect = 5.0e-67
Identity = 147/249 (59.04%), Postives = 182/249 (73.09%), Query Frame = 1


Query: 1   MALQHTLGLLSLVLPSSNCKFEGVALFAPTNSQTSNALSSWRLE--SSYPSSISLMKFPF 60
           MALQHTLG    + P    KF+     A T+S +    S+  +   SS+ S+   +    
Sbjct: 1   MALQHTLGFQKFLSPVKEYKFKDFPSAAGTSSHSEVTGSNTEISCCSSHSSNFIRVPLQL 60

Query: 61  LGSCFRSSTLRAYKTAGSLRSGDGKKKKGQADMDSDEEDDSSSTKKQDLE---LMDAEER 120
            G  FR+S +RA +TA + +SGDGKKKK +   DSDE+DDS STKK ++     MDA ER
Sbjct: 61  QGGRFRNSGVRASRTAETFKSGDGKKKKWEESSDSDEDDDSFSTKKGEVNDPYQMDAAER 120

Query: 121 REWREKIREVIDMNPNVEEEIDNMERRRKMQKLLADYPLVVEEEDPDWPEDADGWGFNLG 180
           REWR  IREVID +P++EEE++  +++ +MQKLLADYPLVVEE+DPDWPED+DGWGFNLG
Sbjct: 121 REWRRNIREVIDKHPDIEEELNAEDKKIRMQKLLADYPLVVEEDDPDWPEDSDGWGFNLG 180

Query: 181 QFFDKITIKNKKKDDDKYDDDKDDTGDEIVWQDDNYIRPIKDITIAEWEEAVFKDISPLI 240
           QFF+KITIKNKKKDD   DD+  D+ +EIVWQDDNYIRPIKDIT A+WEE VFKDI+PLI
Sbjct: 181 QFFNKITIKNKKKDD---DDENYDSENEIVWQDDNYIRPIKDITTADWEETVFKDINPLI 240

Query: 241 IFVHNRYKR 245
           I VHNRYKR
Sbjct: 241 ILVHNRYKR 246

The following BLAST results are available for this feature:

BLAST of Lsi09G010070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G010070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK68_CUCSA	1.3e-109	85.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123060 PE=4 SV=1	[more]
B9T531_RICCO	3.5e-67	59.04	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211530 PE=4 SV=1	[more]
A0A067K396_JATCU	1.2e-62	57.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19256 PE=4 SV=1	[more]
V4VQL2_9ROSI	5.0e-58	54.94	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024256mg PE=...	[more]
M1C8A1_SOLTU	4.0e-55	53.01	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024105 PE=4 SV=1	[more]

BLAST of Lsi09G010070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31840.1	8.7e-54	65.12	Thioredoxin superfamily protein	[more]
AT4G28590.1	2.3e-09	31.29	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Lsi09G010070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082090\|ref\|XP_008441666.1\|	1.3e-112	87.30	PREDICTED: uncharacterized protein LOC103485750 isoform X1 [Cucumis melo]	[more]
gi\|449442351\|ref\|XP_004138945.1\|	1.8e-109	85.25	PREDICTED: uncharacterized protein LOC101210591 [Cucumis sativus]	[more]
gi\|659082092\|ref\|XP_008441667.1\|	7.4e-71	90.26	PREDICTED: uncharacterized protein LOC103485750 isoform X2 [Cucumis melo]	[more]
gi\|1000939250\|ref\|XP_015583367.1\|	3.4e-68	59.11	PREDICTED: uncharacterized protein LOC8261697 isoform X2 [Ricinus communis]	[more]
gi\|1000939252\|ref\|XP_015583368.1\|	5.0e-67	59.04	PREDICTED: uncharacterized protein LOC8261697 isoform X3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G010070.1	Lsi09G010070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 122..142 scor
None	No IPR available	PANTHER	PTHR34669	FAMILY NOT NAMED	coord: 1..244 score: 1.2
None	No IPR available	PANTHER	PTHR34669:SF1	MESOPHYLL-CELL RNAI LIBRARY LINE 7-LIKE PROTEIN	coord: 1..244 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G010070	Csa2G123060	Cucumber (Chinese Long) v2	culsiB092
Lsi09G010070	CSPI02G08870	Wild cucumber (PI 183967)	cpilsiB089
Lsi09G010070	Cucsa.266160	Cucumber (Gy14) v1	cgylsiB432
Lsi09G010070	CmoCh15G015210	Cucurbita moschata (Rifu)	cmolsiB253
Lsi09G010070	ClCG06G009790	Watermelon (Charleston Gray)	lsiwcgB030
Lsi09G010070	MELO3C008507.2	Melon (DHL92) v3.6.1	lsimedB031
Lsi09G010070	Cla97C06G119320	Watermelon (97103) v2	lsiwmbB027
Lsi09G010070	Bhi12G001188	Wax gourd	lsiwgoB030
Lsi09G010070	CsGy2G009150	Cucumber (Gy14) v2	cgyblsiB085
Lsi09G010070	Carg19742	Silver-seed gourd	carlsiB775
Lsi09G010070	CsaV3_2G011260	Cucumber (Chinese Long) v3	cuclsiB103

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G010070	Cucurbita moschata (Rifu)	cmolsiB257