CsaV3_2G011260 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAACGAAAAAGAAAAGATCAGCAACTTGATAACTGGCTATGAGAAGAAGATGGGACGGGACGGGAGAGTTAAAAGGGAAATGTTTTGGAGATTTGTGGGGTTTTAGTTTCTGGGTGTCGAGGGGTTTCAAATGACCATTTGAGCTTGCGTCTTCAATTCATGGTTAGTTTCTCCTATCTTTCTCTCCTCTGAATCAATCAACGTTTTTCGCTTCTCCTTTCTTCTTTATACTTATTACTTCCATCTCTCTGAATTTTCATTCTGAAACAATACTCGAAGTTCAAATTTGTGCATTCTTGTAGAAATGGCGCTGCAACATTCACTGGGTTTACCGTCTCTGCTTTTGCCTTCCTCTAATTGCAAATTTGAAGGGGGTGCTTCATTTGTGTCAACCAGTTCCCAAATCACCAATCTTTTCTCTTCTTGGACCTTGGACTCTTCCTATCCTTCATCCATCTCTTTCATGAACTTTCCTTTCCGGGTAATGTAATTCTTTAATCCATATACTCTTATAACTGGGAATCATTCCGAATTCACTCCATGGTAATTTGACATTTGTGGAGTTGTTTTTAGACATGGTGCAACAACATACTTGTAATTAAATCACTTTGAAAGAATGTAAATAAACAATATTTCAGTGTTCGTTTCTTGTTACTTGGGGAGACTAACTGTGAAGCGCTCCATGTTATTATCTGTAGGGTGGTTGTTTTAGAAGCAGCTCTCTAAGGGCCTATAGAACCGCAGGGTCAATCAGGCCCGGTGATGGGAAGAAGAAGAAAGAACAAGCAGGTATGGACTCAGATGAGGAAGATGATTCTTCTTCAGCGAAGGAGCCAGATGTTGAGCTTATGGATGCCGAAGAGAGACGGGAATGGAGGGAGAAGATTAGGAAAGTGATTGATACGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAATAAAGATGCAAAAACTTCTCGCTGACTATCCTCTTGTTGTGGAAGAGGAGGATCCTGATTGGCCTGAGGATGCTGATGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACTATCAAGAATAAGAAAAAAGACGATAAATATGATGATGATAAAGATGACACTGATAATGAAGTAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTTCTGAATGGGAGGAGGCTGTGTTCAAAGATATTAGTCCACTAATCATTTTTGTACATAATCGCTACAAAAGGTATGCTCTTTGAAGGCATCAGTATCTTGTGTGGGGAAAAATTGTTTTTATGTCTTTGATTGATATTTATCTCTTTTTTATATATTTTTTTATTAATTCCAAATCTATGAACCAATGCAAGGATCTGTCCGGTATCCACCCTCACTTCCAAAAACCCAGAAATGTACTAGTAACAGCCCTGTGATTTTTATATCAAGATAAACAACTGTCTAGCAAGTCCACAATATTAACAAGAAATGCTCCATAACATAAACAAGATTTTAACAAGCAAGGAATTAGAAAAGAAACAAAACATCATCACATTCGAGAGACCTGGAAATCCTCTTTAAGCCTCAACTTCACCAAATTCCTCCCCCTAGATAATGAGGCTGAAACCCCCATCGGCCCTATGAAAACCCTCAATTGGACCCCCACCTCAAAGTACAATAGTGAAATACAAAGAGGCAACAAAACACAAGAAACAGCAACAAACCCACACCCAAAACACCCTCAACAAATCCTAATACGACCAACTGACAACAAATATCAAAACAAAATTAATAATAATACAAGCAATCATGCTTAATCGACCAAGAATACAAGCCAAGACAAGAAAAATCCGGGCAAAATAAGGCTTTTCTATCAAGAGATAACTTGCTGTGAGGCTAGTAAGGACAGAATGACCCCATTAAGCCAATTGCTTAATTATGAGAGATACGCTGATTTCTTTCAAACCAAAACCAATCTGAAGGATCTTTAACAACAGTAGACCAAATCAACTGTGGCTTAGCTTCCAAGGACTTAACAAACCCTTTGAGAACATCATCACCGGGAGCTAACTCTCCTTCCAACATTAATCTTGGGGGGGGGGGGGGGGGGGGGGGGGGTATCTCGACCCAAAAAAATCTATGACTTCAATCAAACATAATCAAAGAGTACGCCAAGGAGGGCGATTAGCCCGAAATTGAAACACTCTTCAACCAAAACATCACTAATTGATGGAAGAGTAGTTTTCGCAAGTATCCAATCTAACCTCATCAAACTCAACATTAAGGCCGACAAAGAATTTGTAAATATGACCAACTTCTACAGTTTTTTTGTAATGCTTTTGAACTTCTGTAGACTTCCACTCATATGTATCAAAGAGATCAAGGTCTTTGCCAAATCCTTTTTAGGTAGTGAAAGTATTGTGTCATGGAGTTGCCTCCTTGTCGTATAGCACCTAGTTTAAGATTCAACCTAAACACTTGTGACTGGTTGCCCAAATGAGAATACATTTGAGTAACACTATTCCGTAATTCCTTGTTTAAAAAACATGATCACCTAAATGTTGAAGTGTACACTAGTGTTGATTGGGCAGGTGGCACGATTATTGCTCCTTTGTTGAAGGAAAATATAGTTACTTAGTGAAGTAAAAAATAGAGCGTGATTGCAAGAAATAGTGCAGAAGTAGAATTTAGGGTTTTAGCTCATGGTATTTGTGAGAGCATATGGATAAGAAGACTATTGGAAGAATTGAGATTCTCTCAGATAATACCTATCCCCATTTATTGTGATAACAAGGTAACAATTTCCATTGTCCACAATCCAGTCCTTCGTGATGAGACGAAACATATTGAAGTTGATAAACACTTCATAAAGGAAAAAATTGTTAAGGAATACCATGCATCCCTTATCTTCTACCAAAATAACAAATCACGGATGTGCTAGTTAAAGGTCTTCCAAAGTGGCAATTCAATAACTTAATTGACAAGCTGGCTATGGATGACATCTTCAAACCAACTTTAGGGGGAGTGTTGATTATTTCCTTTATTGTTAATATTTTCATTGTATTTAAGATATATTTGCATATTTGTTTTTCCTACTTCGTATTGAGTATTTCTTCTATTTAAGAAAACCATTTTCCTTTTAAATGAAATAATAGAAAAACACTTTTTTACGCAATTTCTTTAACTAGGATTCTTACATTTTCGTACCTTTCCTGTTATGTGTTCAGTTGTTATTGTTATACTGTCACGTTAGTCTCCCATGGCCTCTTCACTGGATTATAGTGGAACTTTTGAAGTAATAACTACACTTCAGCCACCATTTCTTTAGATTAGATTCTAGAAGGTCTTTTCATAACGCTTCCTCTGGAAGAGGAGATTCCTTTTCCCCTTGTCATTAGGCTGTTTTGTTGAGGCTTTGGGTATTGGAGATATTAAGAGTTCCACATTGGAAAAACCAGGGGAACTCATATTCCATATAAGATAGATGAGCTACTCCTCACATAGCCAATTGGTTTTGAAATGGAACCCCATACTATCAAATTTTAACATGGTATCAGAGCCCACTAAACCCAAACGGGTATTTGGCCCAAGATAGGTGAACCCAAAAGAGGCACCATCTTGAGGGGGCATATTGTAGATATTAAGATTTCTACGTTAGAAAAACCAAGGGCACTCATACTCCATATAAGATAGATGAGCTACTCCTCACATAGTCAATTGGTTTTAAGATGGAATCCCATACTATCAAATTTAACATTGGGCCACTTTGAATGATGTTCCTTGTTTCTCAATTCTCATTAAAAAAGGTAATAATGGGTTAGTAGAAGTAGCTGGCAGGACTGGTCCTCATTGTGGAAATAAAGATATCCCTTCTTCTCCATAATTTGAAGATGATGATTCTGTTGGTGCAATAGTTTTGTTTTGTTTCCGCATACTTCGGTGCATTTCCACCTATAGTTTCTTGAGTCCTCCCTCCATACACTATGCAGTTCCACTAGTTGTTCTTCCACTCCTGAGATCTACTCCCCTGAAATGATACTTTCTTCCAGACTCCAAATGCTTAATTGCGAGGAGCTTACTAGTCTAATCGACTAATACCAATTGGTTATTATTACTTAACGACACAAATCATTATGTCAGAAAAGACAAAGTACAAATGAGGAGAGTTTGAGAGCTCCTCCTCTTCAAATGCCAACCCATGTTGTTGCACACACTATTATGATTTGTGTCTATATTTGATTTCTTGGTTTAACTTGTCGGGAATATGGAAGACCTTTGGATTGTGAACAGTTGACTTTGAACCCTTCAACGTTATGGTTACAGTGGTTTAACAATAACATGAATCATAAGATGATCTTGATCTGTATATGAAAGAAATTTGAACATTTTGAGGGTCATGTATTTGTCTTCAATTAGGCCAAAGGAAAATGAAAAAGTTCGGGAGGAGCTGGAGAAAGCTATACACATAATATGGAATTGCAATCTGCCTTCGCCAAGAGTAAGCCTTTCCTATTTATTGACGGTACTTTGCTCATCTCTCTATATTTAGCAAATGTTGTTATTTTAAACGTACTGTTTTTGACTGCAGTGTGTTGCTGTTGACGCGGTTGTTGAATGCAACTTGGTCACTGCTCTTCAGGTGTCTGCCTTTCCAGAGATTATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGGGTAAGTGCAAAACGAAGTGAAAACATTGCAAGTTTTGTTAATGAAACCTAGAGGTCTGAGTTTTGGGTTGTTTCAGGATTTGTAAATGCAGATGAGTTGTCCAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGACGTTGGGGATTATCAGGAGGCGATCCCATCAGTTTCTTCCTAATTGTACCATAGAAGGATAGGGTATGTAATCGTTTAAAAGAAATTTGAAGTGTAAATTATGCACTTTTAGGTTTATTGTAGATGAGTGCAATCAGTTTGTTGGGCCAAATATTTTTGGAAAGGCCGAAGAACATCAGCTATACAACTTTATGAACTATTTAAGGGTATTATAGAAAAATATGTGATGTATCGTAATTTACGATGAGGTAGCAACAGGAGCAGCTAATTGTGATTCTTGTATTCCTTCTCAGGTCAACTAGTTTGGGTGCTTAATTAACTCCTGTCATA ATGGCGCTGCAACATTCACTGGGTTTACCGTCTCTGCTTTTGCCTTCCTCTAATTGCAAATTTGAAGGGGGTGCTTCATTTGTGTCAACCAGTTCCCAAATCACCAATCTTTTCTCTTCTTGGACCTTGGACTCTTCCTATCCTTCATCCATCTCTTTCATGAACTTTCCTTTCCGGGGTGGTTGTTTTAGAAGCAGCTCTCTAAGGGCCTATAGAACCGCAGGGTCAATCAGGCCCGGTGATGGGAAGAAGAAGAAAGAACAAGCAGGTATGGACTCAGATGAGGAAGATGATTCTTCTTCAGCGAAGGAGCCAGATGTTGAGCTTATGGATGCCGAAGAGAGACGGGAATGGAGGGAGAAGATTAGGAAAGTGATTGATACGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAATAAAGATGCAAAAACTTCTCGCTGACTATCCTCTTGTTGTGGAAGAGGAGGATCCTGATTGGCCTGAGGATGCTGATGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACTATCAAGAATAAGAAAAAAGACGATAAATATGATGATGATAAAGATGACACTGATAATGAAGTAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTTCTGAATGGGAGGAGGCTGTGTTCAAAGATATTAGTCCACTAATCATTTTTGTACATAATCGCTACAAAAGGCCAAAGGAAAATGAAAAAGTTCGGGAGGAGCTGGAGAAAGCTATACACATAATATGGAATTGCAATCTGCCTTCGCCAAGATGTGTTGCTGTTGACGCGGTTGTTGAATGCAACTTGGTCACTGCTCTTCAGGTGTCTGCCTTTCCAGAGATTATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGGGATTTGTAAATGCAGATGAGTTGTCCAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGACGTTGGGGATTATCAGGAGGCGATCCCATCAGTTTCTTCCTAA ATGGCGCTGCAACATTCACTGGGTTTACCGTCTCTGCTTTTGCCTTCCTCTAATTGCAAATTTGAAGGGGGTGCTTCATTTGTGTCAACCAGTTCCCAAATCACCAATCTTTTCTCTTCTTGGACCTTGGACTCTTCCTATCCTTCATCCATCTCTTTCATGAACTTTCCTTTCCGGGGTGGTTGTTTTAGAAGCAGCTCTCTAAGGGCCTATAGAACCGCAGGGTCAATCAGGCCCGGTGATGGGAAGAAGAAGAAAGAACAAGCAGGTATGGACTCAGATGAGGAAGATGATTCTTCTTCAGCGAAGGAGCCAGATGTTGAGCTTATGGATGCCGAAGAGAGACGGGAATGGAGGGAGAAGATTAGGAAAGTGATTGATACGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAATAAAGATGCAAAAACTTCTCGCTGACTATCCTCTTGTTGTGGAAGAGGAGGATCCTGATTGGCCTGAGGATGCTGATGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACTATCAAGAATAAGAAAAAAGACGATAAATATGATGATGATAAAGATGACACTGATAATGAAGTAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTTCTGAATGGGAGGAGGCTGTGTTCAAAGATATTAGTCCACTAATCATTTTTGTACATAATCGCTACAAAAGGCCAAAGGAAAATGAAAAAGTTCGGGAGGAGCTGGAGAAAGCTATACACATAATATGGAATTGCAATCTGCCTTCGCCAAGATGTGTTGCTGTTGACGCGGTTGTTGAATGCAACTTGGTCACTGCTCTTCAGGTGTCTGCCTTTCCAGAGATTATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGGGATTTGTAAATGCAGATGAGTTGTCCAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGACGTTGGGGATTATCAGGAGGCGATCCCATCAGTTTCTTCCTAA MALQHSLGLPSLLLPSSNCKFEGGASFVSTSSQITNLFSSWTLDSSYPSSISFMNFPFRGGCFRSSSLRAYRTAGSIRPGDGKKKKEQAGMDSDEEDDSSSAKEPDVELMDAEERREWREKIRKVIDTNPNVEEEIDNMERRIKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKKDDKYDDDKDDTDNEVVWQDDNYIRPIKDITISEWEEAVFKDISPLIIFVHNRYKRPKENEKVREELEKAIHIIWNCNLPSPRCVAVDAVVECNLVTALQVSAFPEIIFTKAGKILYREKGFVNADELSKIMAFFYYGAAKPPCLNDVGDYQEAIPSVSS
BLAST of CsaV3_2G011260 vs. NCBI nr
Match: XP_004138945.1 (PREDICTED: uncharacterized protein LOC101210591 [Cucumis sativus] >XP_011649078.1 PREDICTED: uncharacterized protein LOC101210591 [Cucumis sativus] >KGN61444.1 hypothetical protein Csa_2G123060 [Cucumis sativus]) HSP 1 Score: 632.5 bits (1630), Expect = 8.6e-178 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. NCBI nr
Match: XP_008441666.1 (PREDICTED: uncharacterized protein LOC103485750 isoform X1 [Cucumis melo]) HSP 1 Score: 579.7 bits (1493), Expect = 6.6e-162 Identity = 289/346 (83.53%), Postives = 301/346 (86.99%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. NCBI nr
Match: XP_022929067.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata] >XP_022929069.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata] >XP_022929070.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata] >XP_022929071.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata]) HSP 1 Score: 493.4 bits (1269), Expect = 6.2e-136 Identity = 281/347 (80.98%), Postives = 306/347 (88.18%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. NCBI nr
Match: XP_023551318.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023551319.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133 Identity = 281/348 (80.75%), Postives = 305/348 (87.64%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. NCBI nr
Match: XP_022154590.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 483.0 bits (1242), Expect = 8.4e-133 Identity = 266/346 (76.88%), Postives = 294/346 (84.97%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TAIR10
Match: AT2G31840.1 (Thioredoxin superfamily protein) HSP 1 Score: 350.9 bits (899), Expect = 9.0e-97 Identity = 186/245 (75.92%), Postives = 207/245 (84.49%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TAIR10
Match: AT4G28590.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 71/176 (40.34%), Postives = 98/176 (55.68%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. Swiss-Prot
Match: sp|Q9SKB6|MRL7L_ARATH (Thioredoxin-like fold domain-containing protein MRL7L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRL7L PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.6e-95 Identity = 186/245 (75.92%), Postives = 207/245 (84.49%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. Swiss-Prot
Match: sp|Q0DI48|MRL7L_ORYSJ (Thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRL7L PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 4.6e-66 Identity = 130/233 (55.79%), Postives = 168/233 (72.10%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. Swiss-Prot
Match: sp|Q5QLS7|MRL7_ORYSJ (Thioredoxin-like fold domain-containing protein MRL7 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRL7 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32 Identity = 87/221 (39.37%), Postives = 122/221 (55.20%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. Swiss-Prot
Match: sp|F4JLC1|MRL7_ARATH (Thioredoxin-like fold domain-containing protein MRL7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRL7 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28 Identity = 71/176 (40.34%), Postives = 98/176 (55.68%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TrEMBL
Match: tr|A0A0A0LK68|A0A0A0LK68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123060 PE=4 SV=1) HSP 1 Score: 632.5 bits (1630), Expect = 5.7e-178 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TrEMBL
Match: tr|A0A1S3B4P3|A0A1S3B4P3_CUCME (uncharacterized protein LOC103485750 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485750 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 4.4e-162 Identity = 289/346 (83.53%), Postives = 301/346 (86.99%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TrEMBL
Match: tr|A0A1S3B3H0|A0A1S3B3H0_CUCME (uncharacterized protein LOC103485750 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485750 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 5.2e-123 Identity = 218/244 (89.34%), Postives = 226/244 (92.62%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TrEMBL
Match: tr|B9T531|B9T531_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0211530 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.1e-107 Identity = 230/350 (65.71%), Postives = 274/350 (78.29%), Query Frame = 0
BLAST of CsaV3_2G011260 vs. TrEMBL
Match: tr|A0A2P4LYW3|A0A2P4LYW3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_56367 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 2.6e-106 Identity = 208/350 (59.43%), Postives = 244/350 (69.71%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|