Lsi09G008020 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAGTAAAGTTTAGCGTAAATGTAATGGAAGTACAGATGGACGTAGTGAAACGTGTTTAAGAAGAAGAAGAAGAACAAAACAAGTCGGTCAGTTCCCCCAAATCTGTGCAGCCGCAGCTTAATCTTTCTCTATTTCTCTTTCAAATCCCACGTTTTTTTCTCTTCAATTTCCCACAAACTTCGTCGTTTATCGGATCTCTTCTTACAGATTCGCCGCCCTCTTCTATTCTCAATCTGTTCCATTTCTTTCTCCTCACAAAATTCCCTGCGTCCCTCTCAATTCTTGCCCTCGAGCTCTTTATCTGATTATCTGTTGAGATTTTCACTGCGCGATTCCAATCTTTTTTCTGGGTTTTTCGTTTCATGTAATGGGTAATTGGAGAGAACGGCCTAGGAGAAATTTTCGGAACCAGAAGCCTCCATGGTCGGCGATAAGAAATTACGATCACGATCCTCCACTAGGTGATTTTCTCCCTTTCTTATTTTTAGAATTAGGGTGTCGTAACGATTTCTTTGATTAATGGATACTGGATAGTTATTATTCATTAGTTCAGCTGTTGAATTGAATGGACATCAGGGTTGTTTTTAGTCGGTTCTGTTTTGAAGAATGGTTTTTAGGCAAAATGTTTAGATGAAATGAAGATTGGGTTGGAGTTGGCACTTATCTTGATTGATCCTTTGTTTTATTTTGTTTCATGATTAGATTTGTACCTAATGAAAGTTCGTTTTTTATTATTTTTATTTTTCAATAAAGTTGTGAATCTGTGATGCCTGCTGCTATTGTACGGACAATAAGTTACTGTTTATAGTAGTTTCTGCCAATATAAAATGCAATGCAACAGCTTATTATGTTCTTTTTTTCCCTTCCTTTTTTGGAAAGACGAGGAAAGTGAATGTGATCAGTGTGCTGTGTGAAGAAGATGTTAAATGGGACATTGGAAGTTGTAGACTCCGTTTATAACCATTTGGTTTTTTGTTTTAGAAAATTAAACTTTATGTACACTACTTCCACCACCGTAAGTTTCTATTTTTTGTGATACACTTGCAGTTAATGTTTTCAAAAACCAAGTCAAGTTTTGAAAACTAGAAAAAGTAGTTTTTGTTTTTGGACTTGGAAATTGAGAGAAATAAAACATAAATTTCAAAAATTAAAAACTAAAAACAAAATTGTTATCAAACGAGTCGTAGTAATTATGAAATTAGAAGTGGTCCTTTCTAATTTTGTTAGAACAATTTGTAGAATAAGTCCGATATTTCTAGATGATTGGTGTTTAGAGGTAAGATTGTTGCTTATTTCTTATATTCCTTGAACTTTTAGTTGATTAATAATGTTAATAGGTCATTTTCTCAGAAATATATGAACCATAGAAACTGCTGATGGTTACTGTTGTAAGATGATGTGCCTTCTTATTACATTACAAGAAAAAATCTCATGAGAAATGGTGATTGCACCAAACAGGGATAAAATTGATTGTACGACCTTAAATTTTTCCCTATTTCTATTTTTTAATCAAATTTTGCAATTCAGACAAGGCCAAGTGGTGGATTGCAGTGGTTTATGGGATCAGAAATGACAAGAGAGTTTCCACAAAACAAGTTTGATTAGTCATAAACTTAACACTCAATTGAACTTCAAACTTAATTGTATCTAAATACTCTTCTATTTCTTGAAACTGAATATGTAGACAGGGAGCTTGAGGAGGATTCAATGCCCTTTTGTGCATTCTTCATGTCAATCATTGTAGAGGGAGAAGGTAACAGTGAATTGTTAAGGGTGATATAGTGGCAAAAAAAGATTTGGAAAGAGAGAAGGAAGAAGAAGATCCAGAAAAGGAGGAGACAGAGATTCTGAGGGAGAAAATAGGGAATTGGAGAGAGAAGAAAGGGATCAAAAAGATGGGAGGGAGAGTAGGGTGCAACATAAACATAAAATGTTCAATTAATAAATTTTAATTAGATCAAAATATTATTAAATATTAATAAACAATGCCACATCACCACTTAATTACCATTACTTGTTTGTCGAAGTTCCTAACTCCTTAGAGAAAGTTGATGGTAGGGACTAATTTGGCTAATCTTCAAAACTTCAAGATTTAATTGTTTGTGTTAAAGACCCACGGATATCAAAAAAAATAAAAAATCCATTTAATCTCTTCACTGATTTTAAAGCATTTGGAAATATGTGATTGTAGAATTTTTATTTGTTTGGAATCTGGATAAACAGAAAATGCAAATAACACATTGTTTTGTAGGATCCTCATCCATATTATTAATCCTTCAGTGAACTTAATGGTTCTGAATTAATTTCATCACTTCTTCTTCGTGTAGAGTGTTGGCGAGATGGTATTCCTTTATGGGAAAAGAAATTTTGCAAAGAGATCGGTTGTGTGCCATGGGGTAAAATAGTTGATTCCAAGAACTTTATTTATTGTCATGCTAATGTAGTCAATTGGGATGATTCCGCTTGTGAAGAGGCATTCCACAATGCCAAAAGACGTTACTGGATAGAGATTAATGGTCATCAGAATGACATCTATTTGCCTGATCCAGACAAATATATTGAACAAATCGATTGGAGTCCTGATATGAATTCTGAAATGATTGAGGAACTGGATTGGGCATATCACACTCCGAATATGAAACAACATGATGTTTGGTTGGAATGCAAAAATAAAAGGACAAGGAACTCCAGTTCTGTTTGGACAGAAGGCCACAATGAAGATCCAGGCCATGTGGGTAATTCCTGGGAAGATGATAATCAATTCATTGAAAATACAGGACAAGGATGCAGCCAGTGGGATTTAAGTGATTCAGGGAAGGTGAATAATGATGGCAATCCTTGGGACAGTAGCATTGACCAGGGGAACAGGGGTACGGTGGACAGTGCCTGGAAGGTTAAAGCGAATCAAGTTGCCACCTCTTGGAAGAATAAAGGATTTGCTAGTGATGCAAGGGGTGTGGTAGACAATGCCTGTAGAGATAAAATGCATCAAGGTGGCAATGCCTCCTGGAAGACTAAAGGGTTTGCTAGTGATGCAAGAAATAACTCATGGAGCAGGCACCAGCAGGGTGCCAGTAATTTTGATCATCATAATAGGCCTGGGAATAACAGTTACAATCGTAACGTCAGACATTTAACTGATAGAACACGGCCGAATACTCATGGAAACAATCAAGATTGGAAATATCAGTATAGGTATGGCAAGAGGCCAAAAGATGCAGAATTTGATAACTTTGGAGGGTAGGGATCATGGCAACATTCCTCCCACAGGGGGGAGAGTTTTGATTAGCGTGTATCATGCTGGAGGGTATTCAAAAATTCAAAGAGATTACTAATGGTTGTTGTAGGAGTTGAATCGCCAAATGAATTTTGATTTTGCCCACAAGTAGCCGACCAGCGACCACTTCTGTTTTTGCTTTGATACTGCAGGTTTGTCTATGTTTTTGTTGGTAGATTTTTAACTTTTTTCAACAAGAACGATACTGCAGGATTTTTGGTATAAAAAATTGAATATGAATGGCTTGATTCTTTTGTAAGTCATTAGGTAGATTTCTTCCCTCCCAATGCATTATCCTTGTACTATCAGGCCACATTAAAGTTCGTATCATTTTGATTTGAGAAACCTCTTTTGGGAGGCTTTATAGAGGCAATAACAGCTCTACTTTTCACTCTAATTCTGAGTTGTAGTGGTTTCTTATTCTTAGCCAATAACATGGCAGAGCTCCACTGTACATCATCTTGATAATCGCCCTCACTTGAAACCTTGCAAGTGATCTATTCTCCTCATTAATATTTGATAACTTACTTTCATTTTCCTGTATCTTTTTTTTTTCCTCTTTTTCTTCAGAATCATATTCTAACAGACGATTGGTTTTTTTCCCCAAGAAGAAATAAGCACCTTCTTCAAATATTCAGAAAATTTGCTTCTTAAATATGTGTTGCACTTGCACACTCTGGGACATGCAGTTTGTTCTTGTTCTTCTGTCCTTGTTCTGAGAAATGAGAATTCTGCTGTTGGGAATGGGGATATACCAAGATCTGGAAATAGGAGGACGAGTGTACGAGTCCAACACGGTTGGCCACCACAGAAGAAGAAAGCAGTAATTGGGAAGAGGTAAGACCCTCCCAAGCATGTTATTTTCAATTTATGTAGATAATCTGTTTTCTTGTCTGTTCAGCTATTTTTGTTATTGCTTTTAAGGTCTTTAGTAGGAAAAAGAGGGTCTTGACAATCTAACCTAGAGAGTATGGTCTGGGTTTGTTAGTTTCCATTATGTAAACAGAGTTTTTAACCTTTTCTTGAGTCCCAATCAAAGAATTATAAGATTTAAGAGTGCAGGATGTTTGTATGATTTGTTTGAGAACGTCCTTTATTTTGGGTTGGTCTTCTGTTTTAAAAATCATGTTTATTTACTAACCATGCAATTTTGGCTAAGATTTTTCTGAATAACTAAATAAAGAAAAGAGGCATAAGATCAATTTTAAAGAACAGAACTAAATGCAAAATCATTTTGAAATGGGACTATAGATTGCTGCTAGGAACAGATTGATTTTTCTGTTAGCAGCATAAGATTCAAAATGTCATCATAATTTTGAAATTTACTTCCCATTACTTTAAAGGGTCTGAGTCTTGTTGGTTCTTCAAGAACACAATGCAAAGTTTTGAATCTGATGGTTGAAGCCTGAGGGATTTCAGGTATCTGAGAAAGGAGGAACAGAAAGCCCCATGGATATCTCACTGATTTTCTGATTTGATTTAGATTTTATGTTGTAATTTGCATAATTAGATGGCTAGTTTTAGTTGATATCCTAATGGTGGATGAAAATGCTGAATGAAAGTAAATTAGGAGGAGGTTGGGAATCAACAAGAAATCACAACTGGTTTTAGCCTTCACTTATTATTGCTTATTTTCGTGTGTCTTGTCTTGTAAAGTGATAAGTTTCATCTTGTATTTTGTATCATTGAAGATTAAATGAAGATTTATATTTCTTTGAGAAATTTATGCATAGTTTCTAAGATTTGGGTGTAAGTATAACGTCATAGTTTCAATCCTAATAAAAAATAAGAATAACATAGCATAATTGAGATGAATGAGACGTTAGTTATCTCCCAAATTCTGAAATCTCATTTCATATATATATATATATATATATATATATATATATATATAAGAAATAAAAAATTAACTTACTAGGCATGGGCGGGAAACCTTTT AAAAGAGTAAAGTTTAGCGTAAATGTAATGGAAGTACAGATGGACGTAGTGAAACGTGTTTAAGAAGAAGAAGAAGAACAAAACAAGTCGGTCAGTTCCCCCAAATCTGTGCAGCCGCAGCTTAATCTTTCTCTATTTCTCTTTCAAATCCCACGTTTTTTTCTCTTCAATTTCCCACAAACTTCGTCGTTTATCGGATCTCTTCTTACAGATTCGCCGCCCTCTTCTATTCTCAATCTGTTCCATTTCTTTCTCCTCACAAAATTCCCTGCGTCCCTCTCAATTCTTGCCCTCGAGCTCTTTATCTGATTATCTGTTGAGATTTTCACTGCGCGATTCCAATCTTTTTTCTGGGTTTTTCGTTTCATGTAATGGGTAATTGGAGAGAACGGCCTAGGAGAAATTTTCGGAACCAGAAGCCTCCATGGTCGGCGATAAGAAATTACGATCACGATCCTCCACTAGGGAGCTTGAGGAGGATTCAATGCCCTTTTGTGCATTCTTCATGTCAATCATTGTAGAGGGAGAAGAGTGTTGGCGAGATGGTATTCCTTTATGGGAAAAGAAATTTTGCAAAGAGATCGGTTGTGTGCCATGGGGTAAAATAGTTGATTCCAAGAACTTTATTTATTGTCATGCTAATGTAGTCAATTGGGATGATTCCGCTTGTGAAGAGGCATTCCACAATGCCAAAAGACGTTACTGGATAGAGATTAATGGTCATCAGAATGACATCTATTTGCCTGATCCAGACAAATATATTGAACAAATCGATTGGAGTCCTGATATGAATTCTGAAATGATTGAGGAACTGGATTGGGCATATCACACTCCGAATATGAAACAACATGATGTTTGGTTGGAATGCAAAAATAAAAGGACAAGGAACTCCAGTTCTGTTTGGACAGAAGGCCACAATGAAGATCCAGGCCATGTGGGTAATTCCTGGGAAGATGATAATCAATTCATTGAAAATACAGGACAAGGATGCAGCCAGTGGGATTTAAGTGATTCAGGGAAGGTGAATAATGATGGCAATCCTTGGGACAGTAGCATTGACCAGGGGAACAGGGGTACGGTGGACAGTGCCTGGAAGGTTAAAGCGAATCAAGTTGCCACCTCTTGGAAGAATAAAGGATTTGCTAGTGATGCAAGGGGTGTGGTAGACAATGCCTGTAGAGATAAAATGCATCAAGGTGGCAATGCCTCCTGGAAGACTAAAGGGTTTGCTAGTGATGCAAGAAATAACTCATGGAGCAGGCACCAGCAGGGTGCCAGTAATTTTGATCATCATAATAGGCCTGGGAATAACAGTTACAATCGTAACGTCAGACATTTAACTGATAGAACACGGCCGAATACTCATGGAAACAATCAAGATTGGAAATATCAGTATAGGTATGGCAAGAGGCCAAAAGATGCAGAATTTGATAACTTTGGAGGGTAGGGATCATGGCAACATTCCTCCCACAGGGGGGAGAGTTTTGATTAGCGTGTATCATGCTGGAGGGTATTCAAAAATTCAAAGAGATTACTAATGGTTGTTGTAGGAGTTGAATCGCCAAATGAATTTTGATTTTGCCCACAAGTAGCCGACCAGCGACCACTTCTGTTTTTGCTTTGATACTGCAGAATCATATTCTAACAGACGATTGGTTTTTTTCCCCAAGAAGAAATAAGCACCTTCTTCAAATATTCAGAAAATTTGCTTCTTAAATATGTGTTGCACTTGCACACTCTGGGACATGCAGTTTGTTCTTGTTCTTCTGTCCTTGTTCTGAGAAATGAGAATTCTGCTGTTGGGAATGGGGATATACCAAGATCTGGAAATAGGAGGACGAGTGTACGAGTCCAACACGGTTGGCCACCACAGAAGAAGAAAGCAGTAATTGGGAAGAGGTATCTGAGAAAGGAGGAACAGAAAGCCCCATGGATATCTCACTGATTTTCTGATTTGATTTAGATTTTATGTTGTAATTTGCATAATTAGATGGCTAGTTTTAGTTGATATCCTAATGGTGGATGAAAATGCTGAATGAAAGTAAATTAGGAGGAGGTTGGGAATCAACAAGAAATCACAACTGGTTTTAGCCTTCACTTATTATTGCTTATTTTCGTGTGTCTTGTCTTGTAAAGTGATAAGTTTCATCTTGTATTTTGTATCATTGAAGATTAAATGAAGATTTATATTTCTTTGAGAAATTTATGCATAGTTTCTAAGATTTGGGTGTAAGTATAACGTCATAGTTTCAATCCTAATAAAAAATAAGAATAACATAGCATAATTGAGATGAATGAGACGTTAGTTATCTCCCAAATTCTGAAATCTCATTTCATATATATATATATATATATATATATATATATATATATAAGAAATAAAAAATTAACTTACTAGGCATGGGCGGGAAACCTTTT ATGGTCGGCGATAAGAAATTACGATCACGATCCTCCACTAGGGAGCTTGAGGAGGATTCAATGCCCTTTTGTGCATTCTTCATGTCAATCATTGTAGAGGGAGAAGAGTGTTGGCGAGATGGTATTCCTTTATGGGAAAAGAAATTTTGCAAAGAGATCGGTTGTGTGCCATGGGGTAAAATAGTTGATTCCAAGAACTTTATTTATTGTCATGCTAATGTAGTCAATTGGGATGATTCCGCTTGTGAAGAGGCATTCCACAATGCCAAAAGACGTTACTGGATAGAGATTAATGGTCATCAGAATGACATCTATTTGCCTGATCCAGACAAATATATTGAACAAATCGATTGGAGTCCTGATATGAATTCTGAAATGATTGAGGAACTGGATTGGGCATATCACACTCCGAATATGAAACAACATGATGTTTGGTTGGAATGCAAAAATAAAAGGACAAGGAACTCCAGTTCTGTTTGGACAGAAGGCCACAATGAAGATCCAGGCCATGTGGGTAATTCCTGGGAAGATGATAATCAATTCATTGAAAATACAGGACAAGGATGCAGCCAGTGGGATTTAAGTGATTCAGGGAAGGTGAATAATGATGGCAATCCTTGGGACAGTAGCATTGACCAGGGGAACAGGGGTACGGTGGACAGTGCCTGGAAGGTTAAAGCGAATCAAGTTGCCACCTCTTGGAAGAATAAAGGATTTGCTAGTGATGCAAGGGGTGTGGTAGACAATGCCTGTAGAGATAAAATGCATCAAGGTGGCAATGCCTCCTGGAAGACTAAAGGGTTTGCTAGTGATGCAAGAAATAACTCATGGAGCAGGCACCAGCAGGGTGCCAGTAATTTTGATCATCATAATAGGCCTGGGAATAACAGTTACAATCGTAACGTCAGACATTTAACTGATAGAACACGGCCGAATACTCATGGAAACAATCAAGATTGGAAATATCAGTATAGGTATGGCAAGAGGCCAAAAGATGCAGAATTTGATAACTTTGGAGGGTAG MVGDKKLRSRSSTRELEEDSMPFCAFFMSIIVEGEECWRDGIPLWEKKFCKEIGCVPWGKIVDSKNFIYCHANVVNWDDSACEEAFHNAKRRYWIEINGHQNDIYLPDPDKYIEQIDWSPDMNSEMIEELDWAYHTPNMKQHDVWLECKNKRTRNSSSVWTEGHNEDPGHVGNSWEDDNQFIENTGQGCSQWDLSDSGKVNNDGNPWDSSIDQGNRGTVDSAWKVKANQVATSWKNKGFASDARGVVDNACRDKMHQGGNASWKTKGFASDARNNSWSRHQQGASNFDHHNRPGNNSYNRNVRHLTDRTRPNTHGNNQDWKYQYRYGKRPKDAEFDNFGG
BLAST of Lsi09G008020 vs. TrEMBL
Match: A0A0A0KNE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440120 PE=4 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 3.5e-142 Identity = 243/306 (79.41%), Postives = 264/306 (86.27%), Query Frame = 1
BLAST of Lsi09G008020 vs. TrEMBL
Match: A0A0R0K8A5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G142100 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.7e-38 Identity = 118/312 (37.82%), Postives = 168/312 (53.85%), Query Frame = 1
BLAST of Lsi09G008020 vs. TrEMBL
Match: K7KK89_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G142100 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.7e-38 Identity = 118/312 (37.82%), Postives = 168/312 (53.85%), Query Frame = 1
BLAST of Lsi09G008020 vs. TrEMBL
Match: A0A151RES1_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_037569 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.9e-38 Identity = 117/313 (37.38%), Postives = 165/313 (52.72%), Query Frame = 1
BLAST of Lsi09G008020 vs. TrEMBL
Match: K7LQH7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G149400 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37 Identity = 125/320 (39.06%), Postives = 170/320 (53.12%), Query Frame = 1
BLAST of Lsi09G008020 vs. TAIR10
Match: AT3G51940.1 (AT3G51940.1 unknown protein) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 81/243 (33.33%), Postives = 128/243 (52.67%), Query Frame = 1
BLAST of Lsi09G008020 vs. TAIR10
Match: AT5G03990.1 (AT5G03990.1 unknown protein) HSP 1 Score: 115.9 bits (289), Expect = 4.8e-26 Identity = 80/239 (33.47%), Postives = 116/239 (48.54%), Query Frame = 1
BLAST of Lsi09G008020 vs. NCBI nr
Match: gi|659072482|ref|XP_008465788.1| (PREDICTED: uncharacterized protein LOC103503387 [Cucumis melo]) HSP 1 Score: 532.3 bits (1370), Expect = 6.1e-148 Identity = 258/335 (77.01%), Postives = 270/335 (80.60%), Query Frame = 1
BLAST of Lsi09G008020 vs. NCBI nr
Match: gi|778702751|ref|XP_011655255.1| (PREDICTED: uncharacterized protein LOC101203639 [Cucumis sativus]) HSP 1 Score: 512.7 bits (1319), Expect = 5.0e-142 Identity = 243/306 (79.41%), Postives = 264/306 (86.27%), Query Frame = 1
BLAST of Lsi09G008020 vs. NCBI nr
Match: gi|645251094|ref|XP_008231521.1| (PREDICTED: uncharacterized protein DDB_G0290685-like isoform X1 [Prunus mume]) HSP 1 Score: 171.8 bits (434), Expect = 2.1e-39 Identity = 107/296 (36.15%), Postives = 157/296 (53.04%), Query Frame = 1
BLAST of Lsi09G008020 vs. NCBI nr
Match: gi|947114620|gb|KRH62922.1| (hypothetical protein GLYMA_04G142100 [Glycine max]) HSP 1 Score: 166.8 bits (421), Expect = 6.7e-38 Identity = 118/312 (37.82%), Postives = 168/312 (53.85%), Query Frame = 1
BLAST of Lsi09G008020 vs. NCBI nr
Match: gi|571450612|ref|XP_006578475.1| (PREDICTED: uncharacterized protein LOC100797066 [Glycine max]) HSP 1 Score: 166.8 bits (421), Expect = 6.7e-38 Identity = 118/312 (37.82%), Postives = 168/312 (53.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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