Cp4.1LG13g05980 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAGTACAGATCCACGTAGTGCAGTGTGTTCAAGAAGAAGAACGAAACGGGTCGGTCAGTTCGCTCAAAGATCCGCAGCCGCAGCCTTTGATCTTTGTTTATCTATTCTATAATCTCGATTTCTCTTTCAAATTCCAAGTTTTATCACTTCAATTACCGACTCATTTCGCCATTTATCCCGTCTCTCTTCTTAAGATTTGGCGCTCTTCTGTTTTCACTCTGTTCGATTTCTTCGGTGCCACAACACGGCTTGCGTCTCAATTCTTGGCCTCTCTTTGTTTATGTGATTCGCTGTTGACTGTTGAGAGTATCATCGCGTGGTTCGAATCTGTTTTTTGGGGTTTTTGTTTGATGTAATGGGTAATTGGAGAGAACGGCCTAGGAGAAATTTTCGGAATCAGAAGCCTCCTTGGTCGGCGTTAAGAAATTACGATCAAGATCCTCCGCTAGGTGATTTTCTTCCCTTGTTGTTTTTAGAATTAGGGTGCTGTGAGTTTCTTTTGTAGTGAAATTTCATGTTCGTCATTGAATTGAATGGAACTCGATTTCTTTGATTAGTTTCGTTAGTTGTTGGATAGAAATTATTCATTATTTCAGTTGTTGAATTGAATGGACATCTGGATTGTTTAGTCAGTTTTGTCTTGAAGAATGGCTTTTAGGCAAAATGTTGAAGTGAAGCTTGGGTTGGAGTTGGTAGGGATCTTGATTGATCCTTTGCTTTATTTTATTTCATATTTAGATTTTTACAGAAAGGACGTTCTTATCTTTTTCGTAATCTTGTGAATGTGATGTCTGCCGTAATTTACGGGCAATAAGGTTACTGTTTTGAGTAGTTTATGAATAAAAATGCAATGTAACATCTTTTCTTTTCATCTTTTTTGGAAAGATGAGAAAGTGAATGCGATCAGTGGGCTGTGTGAGATTGATGAAGATGATATTCTCATGTTAAACATGAAATTGGAAGTTGTAGTAATTATGAAATTGGAAGCGGTCCTTTCTAATTTTGTTAGAACATCTTTTCTTTTTATCTTTTTTGGAAAGAGGAGAAAGTGAATGTGATCAGTGGGCTGTGTGAGATTGATGAAGATGATATTCTCATGTTAAACATGAAATTGGAAGTTGTAGTAATTATGAAACTGGAAGCGGTCCTTTCTAATTTTGTTAGAACTACTCCCAATTTGAAAAAATAAGTACCTTATTTCTAGATGATTGATGTTCTAGGGCTAAGAGTATTGCTTATTTCATGTATCATAGATCTTTTATTGATTAATAATATTAATAGAAGGCCATTTTCTCAGAAATATATGAACCATAGAAACTGCTGATGGTTACCGTTAAAAGATGATGTTGCCATCTTATTACATTACAAGAAGAAGAAAAAATCTCATGAAAAGTGGTAATTGTAGGAAATAGGGATGAATTTGATTGTACCTCCTTAAAACTTACATTTCTTTTCTATTTCTATCAAATTTTGCAATTCAGACAAGGCTAAGTGGTGGCTTACGGTGGTTTATGGGATTAAAATTGACAAGTGAGTTTTCCACAAAACAAGTTTGATTAGTCATAAGATTAGCACTTAATTAAGCTTCAAACAAATTTGTATCTAATCACTCTTCCACTTCTTGAAACTGAAAATGTAGACTGGAAACTTGAGGAGGATTCGATGCCCTTTTGTGTATTCTTCATGTCAATCATTGTAAAGGGCTGCTATTAAGGGTATATTAGTAGTTAGTTAGGGAGTGTTATAATATTTGGTTATAAGTAGAGAGAGAGTGGAAAGGGAGGTGGTCGACTTTATTTTGGTGAGTGATTTAGGGCTTGTGAGAGATCTTAAAAAAGGGGGTCCAAGTACCTCGAAGAGTTGGTCTATCTTGTAGTTCGGGTATCTTTTATCTTTCGATACATTTGGGTTCTATCAAATTGAGTGTGTTAAAGCTTCAGGATTAAATTAAACCTAAACCAAATATTAGGAATTGAAATAATAAATATTCCATTTATATCTCTTCACCGATTTCAAAGCATTTGGAAATGTGTGATGGTATTATTTTTATTTGTTTGGCTAAACAAAAAATGCAACACCTTGTTTTGTAGGATGCTCATCCATATTATTAACAGTGAACTTAATCGTTCTGAATTAATTTCATTGTTTCTTCTTCGTGTAGAGTATTGGCGAGATGGCATTCCTTTATGGGAAAAGAAATTTTGCAAAGAGATCGGCTGTGTGCCATGGGGTAAAATAGTTGATTCCAAGAACTTTATTTATTGTCATACTAATGTAGTCAATTGGGATGATTCTGCTTGTGAAGAGGCTTTCCATAATGCTAAAAGACGTTATTGGGCAGCCATTAACGGCCATCAGTGTGATATCAATCTGCCTGATCCGGACAAATATATTGAACAAATCGATTGGAGTCCAGAGATGGATCCTGAATTGATTGAGGAACTGGATTGGGCATACTACAATCCTAATATGAAACAACAGGATGATTGGTTGGAGTGTAAAAATAAAAGGACAAGGAACTCCAGTTCTGTTTGGACAGAAAGTCACATTGAAGATCCAGGTCATGTGGGTAATCCCTGGGAACATGGTAACCAATTCACTGAAACTAAACGACAAGGATGGAGCCAGTGGAATTTAAGTGAGTCGAGGCAGGTGAATAATGATGGCAATCCTTGGGACAATATCATTGACCCAAGGAACAGGGGTATGGTGGACACTGCCTGGAAGGATAAAGGGAATCAAGTTGTCACCTCCTGGAAGAATAAAGGATTTTCTAGAGATGCAAGAAGTATGGTAGACAATGCCTGGAGAGCTAACGTGCAGTATCAAGATGGTGCTGCCACCTGGAAGACTAAAGGGTTTACCAGTGATGCAAGAAATAATTCATGGAGCAGGCACCAGCAGGGTGCCAGTAATTTTGATCATTATAATAGGCCTGGGAATAGCAATTACAATCGGAATGTCAGAAATTTACCTGATAGAATGCCGTCGAATATTCACGGTAACAAACAGGAGTGGAAATATAAGTATAGGTATGGCAAGAGGCCAAAAGATGCACAATTTGATTACATTGGAGGTAGGGATCAAGGAAACATTCCACCCAACCCACAAGGGGGAAGATTTTGATCAGCTGTTTCATGTTGGAGGATATTCAAAGCTTCAAAGAGATTATTTTGGTTGTTGGAGTTGACTGGCCACATGAATTTTGATTTTGCCCACTAGTAGCCAACCACTTCTGTTTTTGCTTTGATACTGCAGGATCATCTATGTTTTTGTTGGTAGTTTTTAACTTTATTTCAACAAGAATGACTGCAGAATTTTTGGTATAAAGAATTGAATATGAGTGACTTGGTTCTTTTGCAGGTCAATAGGTAGATTCCTCCCCTTACAATATGCGATCCTTGTATGATCAGGCCACATTAAGTATGTATCATTTTGATTTGAGAAACCTCTTTTTGGGAGACTTTATAGAGGCAATAACAGCTCTACTATCAATCCAATTATGACTTGTATGTGTGATGGCCTAATCTTAGCCAAGAACATCGTGGAGCTCCATTGTACATCATCTTGATAATCTCCCTCATTCGCCAACCTTGCTAGTTGATCTATTCTCCTCATTAATGATTGACTACTTTAATTCACTTTTTGGTATCTTTTTGCTTCACCTATTTTACTTCAGAATCATATTCTCACAGATGATTGGTTTTTTTCCTTTTTTTTTTCAAGAAGAAATATTCAGACAATTGGCTTCTTAAAAATGTGTTGTACACTCTGGATATGCAGTTTGTTCTTGTTCTTAGGTCCTTGTTCTGAGAAATGAGAATTCTGCTGTTGGGAATATGATAAAACCATGATCTGGAAATAGGAGGACGAGGGTATGAGTCCAACACGGTTGGCCAACACAGAAGAAGAAAGTTCCAAGTGGGAAGAGGTAAGTCCCTCTCAAGCATGTTATTTTCAGCCTCCTTGTGTTGATGCTCTGTTTGCTTATGTTCAGCTATTCTTGTCATTGCTTTTAAGGTCTTTAGTAGGAAAAAGAGCCTTGAACAGAGCATTTAACCTTTTCTCGAGTGTCCAATGAAAGAATTATAAGATTTAAGAGTGCAGGATGTTTAATTTAAGGAATGGACATTGATTGGTTGATGTGTTTGGTTACTCTTCTTTGTGAGGTGAAAATGTTCAACTCTTTTGTATAACACATCCTTTCTCATTTATCACTGGCAGGTAAAGAAATGATTCAGGTACGGCTTGTTTGATAACGTCCTTTATTTTGCTTTGGTCTTCTGCATAAAAAAAAAAATCATGTTTATTTACTAACCATGAACAGAACTAAATGCAAAATTGTTATCAAAATGGGATCCAAGAAATTTCTTGTAGGAACACTGATGGATTTGCTGTTAGCTGCATAAGATTCAAAATTTCAGGTGTCTTAATCTCACCCATTTTCTGATTTACTTTGGCTTCTGTGTTGTAAATTGCATAATTGGACGGCTAGTTTTGGTTTGATCAGATCTTCTGGTGGCAGAGTTGCGTGCTTGGATTGAAATGCTGAATGAAAATAAACTGGCTGAGGGTTGTTGTTAATCAACACTGGTTTTGAGTGGTTTTGCTTGCAGCCTTGACTTATTACTGCTTCTATTCACTCTCTCGTCCAGTGATAATCCTCATCTTGTAGTATTTTGTTTATAAGTACAAGTAGGGTATAAGATTCTGAACAACAATGTAAATTTTATATTTAAATTTCAATTTTTAAGATTGCTAGTTGAACATTTTAACTAGATTTTTAGATAATTTTCTTAATTTGATTCGTATATACAACATTATTTGGTTTTTTTATTAAACATCATTCTATTTTATTGATTTTTTTTAAGTAAAAATATCAAATGGAGAATATTTCTCTAAGGTCTTTTCTTTTGAGTTGTTTGGTCGGATTGGTTGTTGAAG TGGAAGTACAGATCCACGTAGTGCAGTGTGTTCAAGAAGAAGAACGAAACGGGTCGGTCAGTTCGCTCAAAGATCCGCAGCCGCAGCCTTTGATCTTTGTTTATCTATTCTATAATCTCGATTTCTCTTTCAAATTCCAAGTTTTATCACTTCAATTACCGACTCATTTCGCCATTTATCCCGTCTCTCTTCTTAAGATTTGGCGCTCTTCTGTTTTCACTCTGTTCGATTTCTTCGGTGCCACAACACGGCTTGCGTCTCAATTCTTGGCCTCTCTTTGTTTATGTGATTCGCTGTTGACTGTTGAGAGTATCATCGCGTGGTTCGAATCTGTTTTTTGGGGTTTTTGTTTGATGTAATGGGTAATTGGAGAGAACGGCCTAGGAGAAATTTTCGGAATCAGAAGCCTCCTTGGTCGGCGTTAAGAAATTACGATCAAGATCCTCCGCTAGATGAGAAAGTGAATGCGATCAGTGGGCTGTGTGAGATTGATGAAGATGATATTCTCATGTTAAACATGAAATTGGAAGTTGTAACAAGGCTAAGTGGTGGCTTACGGTGGTTTATGGGATTAAAATTGACAAAGTATTGGCGAGATGGCATTCCTTTATGGGAAAAGAAATTTTGCAAAGAGATCGGCTGTGTGCCATGGGGTAAAATAGTTGATTCCAAGAACTTTATTTATTGTCATACTAATGTAGTCAATTGGGATGATTCTGCTTGTGAAGAGGCTTTCCATAATGCTAAAAGACGTTATTGGGCAGCCATTAACGGCCATCAGTGTGATATCAATCTGCCTGATCCGGACAAATATATTGAACAAATCGATTGGAGTCCAGAGATGGATCCTGAATTGATTGAGGAACTGGATTGGGCATACTACAATCCTAATATGAAACAACAGGATGATTGGTTGGAGTGTAAAAATAAAAGGACAAGGAACTCCAGTTCTGTTTGGACAGAAAGTCACATTGAAGATCCAGGTCATGTGGGTAATCCCTGGGAACATGGTAACCAATTCACTGAAACTAAACGACAAGGATGGAGCCAGTGGAATTTAAGTGAGTCGAGGCAGGTGAATAATGATGGCAATCCTTGGGACAATATCATTGACCCAAGGAACAGGGGTATGGTGGACACTGCCTGGAAGGATAAAGGGAATCAAGTTGTCACCTCCTGGAAGAATAAAGGATTTTCTAGAGATGCAAGAAGTATGGTAGACAATGCCTGGAGAGCTAACGTGCAGTATCAAGATGGTGCTGCCACCTGGAAGACTAAAGGGTTTACCAGTGATGCAAGAAATAATTCATGGAGCAGGCACCAGCAGGGTGCCAGTAATTTTGATCATTATAATAGGCCTGGGAATAGCAATTACAATCGGAATGTCAGAAATTTACCTGATAGAATGCCGTCGAATATTCACGGTAACAAACAGGAGTGGAAATATAAGTATAGGTATGGCAAGAGGCCAAAAGATGCACAATTTGATTACATTGGAGGTAGGGATCAAGGAAACATTCCACCCAACCCACAAGGGGGAAGATTTTGATCAGCTGTTTCATGTTGGAGGATATTCAAAGCTTCAAAGAGATTATTTTGGTTGTTGGAGTTGACTGGCCACATGAATTTTGATTTTGCCCACTAGTAGCCAACCACTTCTGTTTTTGCTTTGATACTGCAGGATCATCTATGTTTTTGTTGGTAGTTTTTAACTTTATTTCAACAAGAATGACTGCAGAATTTTTGGTATAAAGAATTGAATATGAGTGACTTGGTTCTTTTGCAGGTCAATAGGTAGATTCCTCCCCTTACAATATGCGATCCTTGTATGATCAGGCCACATTAAGTCCTTGTTCTGAGAAATGAGAATTCTGCTGTTGGGAATATGATAAAACCATGATCTGGAAATAGGAGGACGAGGGTATGAGTCCAACACGGTTGGCCAACACAGAAGAAGAAAGTTCCAAGTGGGAAGAGGTAAAGAAATGATTCAGGTACGGCTTGTTTGATAACGTCCTTTATTTTGCTTTGGTCTTCTGCATAAAAAAAAAAATCATGTTTATTTACTAACCATGAACAGAACTAAATGCAAAATTGTTATCAAAATGGGATCCAAGAAATTTCTTGTAGGAACACTGATGGATTTGCTGTTAGCTGCATAAGATTCAAAATTTCAGATCTTCTGGTGGCAGAGTTGCGTGCTTGGATTGAAATGCTGAATGAAAATAAACTGGCTGAGGGTTGTTGTTAATCAACACTGGTTTTGAGTGGTTTTGCTTGCAGCCTTGACTTATTACTGCTTCTATTCACTCTCTCGTCCAGTGATAATCCTCATCTTGTAGTATTTTGTTTATAAGTACAAGTAGGGTATAAGATTCTGAACAACAATGTAAATTTTATATTTAAATTTCAATTTTTAAGATTGCTAGTTGAACATTTTAACTAGATTTTTAGATAATTTTCTTAATTTGATTCGTATATACAACATTATTTGGTTTTTTTATTAAACATCATTCTATTTTATTGATTTTTTTTAAGTAAAAATATCAAATGGAGAATATTTCTCTAAGGTCTTTTCTTTTGAGTTGTTTGGTCGGATTGGTTGTTGAAG ATGGGTAATTGGAGAGAACGGCCTAGGAGAAATTTTCGGAATCAGAAGCCTCCTTGGTCGGCGTTAAGAAATTACGATCAAGATCCTCCGCTAGATGAGAAAGTGAATGCGATCAGTGGGCTGTGTGAGATTGATGAAGATGATATTCTCATGTTAAACATGAAATTGGAAGTTGTAACAAGGCTAAGTGGTGGCTTACGGTGGTTTATGGGATTAAAATTGACAAAGTATTGGCGAGATGGCATTCCTTTATGGGAAAAGAAATTTTGCAAAGAGATCGGCTGTGTGCCATGGGGTAAAATAGTTGATTCCAAGAACTTTATTTATTGTCATACTAATGTAGTCAATTGGGATGATTCTGCTTGTGAAGAGGCTTTCCATAATGCTAAAAGACGTTATTGGGCAGCCATTAACGGCCATCAGTGTGATATCAATCTGCCTGATCCGGACAAATATATTGAACAAATCGATTGGAGTCCAGAGATGGATCCTGAATTGATTGAGGAACTGGATTGGGCATACTACAATCCTAATATGAAACAACAGGATGATTGGTTGGAGTGTAAAAATAAAAGGACAAGGAACTCCAGTTCTGTTTGGACAGAAAGTCACATTGAAGATCCAGGTCATGTGGGTAATCCCTGGGAACATGGTAACCAATTCACTGAAACTAAACGACAAGGATGGAGCCAGTGGAATTTAAGTGAGTCGAGGCAGGTGAATAATGATGGCAATCCTTGGGACAATATCATTGACCCAAGGAACAGGGGTATGGTGGACACTGCCTGGAAGGATAAAGGGAATCAAGTTGTCACCTCCTGGAAGAATAAAGGATTTTCTAGAGATGCAAGAAGTATGGTAGACAATGCCTGGAGAGCTAACGTGCAGTATCAAGATGGTGCTGCCACCTGGAAGACTAAAGGGTTTACCAGTGATGCAAGAAATAATTCATGGAGCAGGCACCAGCAGGGTGCCAGTAATTTTGATCATTATAATAGGCCTGGGAATAGCAATTACAATCGGAATGTCAGAAATTTACCTGATAGAATGCCGTCGAATATTCACGGTAACAAACAGGAGTGGAAATATAAGTATAGGTATGGCAAGAGGCCAAAAGATGCACAATTTGATTACATTGGAGGTAGGGATCAAGGAAACATTCCACCCAACCCACAAGGGGGAAGATTTTGA MGNWRERPRRNFRNQKPPWSALRNYDQDPPLDEKVNAISGLCEIDEDDILMLNMKLEVVTRLSGGLRWFMGLKLTKYWRDGIPLWEKKFCKEIGCVPWGKIVDSKNFIYCHTNVVNWDDSACEEAFHNAKRRYWAAINGHQCDINLPDPDKYIEQIDWSPEMDPELIEELDWAYYNPNMKQQDDWLECKNKRTRNSSSVWTESHIEDPGHVGNPWEHGNQFTETKRQGWSQWNLSESRQVNNDGNPWDNIIDPRNRGMVDTAWKDKGNQVVTSWKNKGFSRDARSMVDNAWRANVQYQDGAATWKTKGFTSDARNNSWSRHQQGASNFDHYNRPGNSNYNRNVRNLPDRMPSNIHGNKQEWKYKYRYGKRPKDAQFDYIGGRDQGNIPPNPQGGRF
BLAST of Cp4.1LG13g05980 vs. TrEMBL
Match: A0A0A0KNE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440120 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 7.1e-131 Identity = 222/307 (72.31%), Postives = 252/307 (82.08%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. TrEMBL
Match: A0A151RES1_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_037569 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44 Identity = 114/273 (41.76%), Postives = 151/273 (55.31%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. TrEMBL
Match: K7LQH7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G149400 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.3e-43 Identity = 114/275 (41.45%), Postives = 155/275 (56.36%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. TrEMBL
Match: A0A0R0K8A5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G142100 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42 Identity = 111/267 (41.57%), Postives = 158/267 (59.18%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. TrEMBL
Match: K7KK89_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G142100 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42 Identity = 111/266 (41.73%), Postives = 156/266 (58.65%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. TAIR10
Match: AT3G51940.1 (AT3G51940.1 unknown protein) HSP 1 Score: 154.1 bits (388), Expect = 1.8e-37 Identity = 85/243 (34.98%), Postives = 133/243 (54.73%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. TAIR10
Match: AT5G03990.1 (AT5G03990.1 unknown protein) HSP 1 Score: 122.5 bits (306), Expect = 5.9e-28 Identity = 77/237 (32.49%), Postives = 121/237 (51.05%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. NCBI nr
Match: gi|659072482|ref|XP_008465788.1| (PREDICTED: uncharacterized protein LOC103503387 [Cucumis melo]) HSP 1 Score: 479.6 bits (1233), Expect = 5.4e-132 Identity = 230/333 (69.07%), Postives = 254/333 (76.28%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. NCBI nr
Match: gi|778702751|ref|XP_011655255.1| (PREDICTED: uncharacterized protein LOC101203639 [Cucumis sativus]) HSP 1 Score: 475.3 bits (1222), Expect = 1.0e-130 Identity = 222/307 (72.31%), Postives = 252/307 (82.08%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. NCBI nr
Match: gi|1012329467|gb|KYP41046.1| (hypothetical protein KK1_037569, partial [Cajanus cajan]) HSP 1 Score: 187.6 bits (475), Expect = 4.3e-44 Identity = 114/273 (41.76%), Postives = 151/273 (55.31%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. NCBI nr
Match: gi|571489222|ref|XP_006591151.1| (PREDICTED: bifunctional endo-1,4-beta-xylanase XylA-like [Glycine max]) HSP 1 Score: 184.1 bits (466), Expect = 4.7e-43 Identity = 114/275 (41.45%), Postives = 155/275 (56.36%), Query Frame = 1
BLAST of Cp4.1LG13g05980 vs. NCBI nr
Match: gi|1009129716|ref|XP_015881916.1| (PREDICTED: bifunctional endo-1,4-beta-xylanase XylA-like [Ziziphus jujuba]) HSP 1 Score: 183.0 bits (463), Expect = 1.0e-42 Identity = 114/299 (38.13%), Postives = 166/299 (55.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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