Lsi09G007310 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G007310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Glutamate decarboxylase
Location	chr09 : 8415330 .. 8415635 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGAAGGGGCGAAGCACGTGTCAGTTCTTCGTGTGGTGATTAGAGAAGATTTCTCTCGCACACTTGCAGAGCGGCTTGTGCTTGATATCGTGAAGGTTTTGGCAGAGTTAGATACTCTTCCACCAAAGAATAGCGGGAAAATGGGGAGCTTAGAAAATGGTAAAAAGGAAAGAAATGGGAAGAAGACAGCAGAGGAAACAGGGAGGGAAATAGCGAGTTATTGGAGGAATATAACGAAGGCTAGGAAAATCAAGCTTGCTGCTAATCTGGCTAGTCCTTCGGTTACAGTAGTTGCCAAATAA

mRNA sequence

ATGCCGGAAGGGGCGAAGCACGTGTCAGTTCTTCGTGTGGTGATTAGAGAAGATTTCTCTCGCACACTTGCAGAGCGGCTTGTGCTTGATATCGTGAAGGTTTTGGCAGAGTTAGATACTCTTCCACCAAAGAATAGCGGGAAAATGGGGAGCTTAGAAAATGGTAAAAAGGAAAGAAATGGGAAGAAGACAGCAGAGGAAACAGGGAGGGAAATAGCGAGTTATTGGAGGAATATAACGAAGGCTAGGAAAATCAAGCTTGCTGCTAATCTGGCTAGTCCTTCGGTTACAGTAGTTGCCAAATAA

Coding sequence (CDS)

ATGCCGGAAGGGGCGAAGCACGTGTCAGTTCTTCGTGTGGTGATTAGAGAAGATTTCTCTCGCACACTTGCAGAGCGGCTTGTGCTTGATATCGTGAAGGTTTTGGCAGAGTTAGATACTCTTCCACCAAAGAATAGCGGGAAAATGGGGAGCTTAGAAAATGGTAAAAAGGAAAGAAATGGGAAGAAGACAGCAGAGGAAACAGGGAGGGAAATAGCGAGTTATTGGAGGAATATAACGAAGGCTAGGAAAATCAAGCTTGCTGCTAATCTGGCTAGTCCTTCGGTTACAGTAGTTGCCAAATAA

Protein sequence

MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERNGKKTAEETGREIASYWRNITKARKIKLAANLASPSVTVVAK

Homology

[Close]

BLAST of Lsi09G007310 vs. Swiss-Prot
Match: DCE4_ARATH (Glutamate decarboxylase 4 OS=Arabidopsis thaliana GN=GAD4 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-16
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+HV+VLRVVIREDFSRTLAERLV D  KVL ELDTLP +   KM    NGK   N
Sbjct: 407 MPADAQHVTVLRVVIREDFSRTLAERLVADFEKVLHELDTLPARVHAKMA---NGKV--N 466

Query: 61  G-KKTAEETGREIASYWRNITKARK 85
           G KKT EET RE+ +YW+ + + +K
Sbjct: 467 GVKKTPEETQREVTAYWKKLLETKK 486

[Close]

BLAST of Lsi09G007310 vs. Swiss-Prot
Match: DCE3_ARATH (Glutamate decarboxylase 3 OS=Arabidopsis thaliana GN=GAD3 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 49/86 (56.98%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+HV+VLRVVIREDFSRTLAERLV D  KVL ELDTLP +   KM S     K   
Sbjct: 407 MPADAQHVTVLRVVIREDFSRTLAERLVADFEKVLHELDTLPARVHAKMAS----GKVNG 466

Query: 61  GKKTAEETGREIASYWRNITKARKIK 87
            KKT EET RE+ +YW+     +  K
Sbjct: 467 VKKTPEETQREVTAYWKKFVDTKTDK 488

[Close]

BLAST of Lsi09G007310 vs. Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-14
Identity = 49/84 (58.33%), Postives = 56/84 (66.67%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+H++VLRVVIREDFSRTLAERLV DI KVL ELDTLP K S KMG +E   +   
Sbjct: 406 MPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKISKKMG-IEGIAENVK 465

Query: 61  GKKTAEETGREIASYWRNITKARK 85
            KK  +E   E+   WR   K RK
Sbjct: 466 EKKMEKEILMEVIVGWRKFVKERK 488

[Close]

BLAST of Lsi09G007310 vs. Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.4e-13
Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+H++VLRVVIREDFSRTLAERLV DI KVL ELDTLP + + K+   E  +   N
Sbjct: 407 MPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELDTLPARVNAKLAVAEE-QAAAN 466

Query: 61  G----KKTAEETGREIASYWRNITKARKIK 87
           G    KKT  E   E+ + W+   + +K K
Sbjct: 467 GSEVHKKTDSEVQLEMITAWKKFVEEKKKK 495

[Close]

BLAST of Lsi09G007310 vs. Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-11
Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+H++VLRVVIREDFSRTLAERLV+DI KV+ ELD LP +   K+ SL   K E N
Sbjct: 407 MPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKI-SLGQEKSESN 466

Query: 61  G-------KKTAEETGREIASYWRNITKARK 85
                   KK+  +  R+I + W+     RK
Sbjct: 467 SDNLMVTVKKSDIDKQRDIITGWKKFVADRK 496

[Close]

BLAST of Lsi09G007310 vs. TrEMBL
Match: A0A0A0KLK1_CUCSA (Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G100000 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-37
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPK   KM SLENGKKE +
Sbjct: 334 MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKKGEKMESLENGKKETS 393

Query: 61  GKKTAEETGREIASYWRNITKARKIKLAANLASPSVTVVAK 102
           GKK+AEET REIA+YWRNIT ARKIKLAA +A PSVTVVAK
Sbjct: 394 GKKSAEETEREIATYWRNITNARKIKLAATMAGPSVTVVAK 434

[Close]

BLAST of Lsi09G007310 vs. TrEMBL
Match: A0A0A0KPU6_CUCSA (Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G106010 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25
Identity = 73/106 (68.87%), Postives = 83/106 (78.30%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDT---LP--PKNSGKMGSLENG 60
           MPEGAKHV VLRVVIREDFSRTLA+RLV+DIVKV+ ELD+   +P  PK S KM  LENG
Sbjct: 407 MPEGAKHVLVLRVVIREDFSRTLADRLVVDIVKVMGELDSSVPIPPIPKKSEKMVRLENG 466

Query: 61  KKERNGKKTAE-ETGREIASYWRNITKARKIKLAANLASPSVTVVA 101
           +K+R+GKKT E  T REI +YW NIT   KIKLAANL  PSV V+A
Sbjct: 467 QKKRSGKKTGEVTTKREIGAYWGNITTGTKIKLAANLGGPSVNVIA 512

[Close]

BLAST of Lsi09G007310 vs. TrEMBL
Match: B9HJL9_POPTR (Glutamate decarboxylase OS=Populus trichocarpa GN=POPTR_0008s14070g PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-17
Identity = 58/94 (61.70%), Postives = 66/94 (70.21%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKM--GSLENGK-- 60
           MP  AKH++VLRVVIREDFSRTLAERLVLDI KV+ ELD LP K S KM     ENGK  
Sbjct: 408 MPADAKHITVLRVVIREDFSRTLAERLVLDITKVMHELDALPAKPSSKMSINGNENGKIS 467

Query: 61  ---KERNG---KKTAEETGREIASYWRNITKARK 85
              + +NG   KKTA ET REI +YW+N   A+K
Sbjct: 468 GSLEGKNGTVVKKTAMETQREITTYWKNFVMAKK 501

[Close]

BLAST of Lsi09G007310 vs. TrEMBL
Match: B9HVP9_POPTR (Glutamate decarboxylase OS=Populus trichocarpa GN=POPTR_0010s11070g PE=3 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-16
Identity = 58/90 (64.44%), Postives = 65/90 (72.22%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMG--SLENGKKE 60
           MP  AKH++VLRVVIREDFSRTLAERLV DI KVL ELD+LP K S K+   S ENGK  
Sbjct: 408 MPADAKHITVLRVVIREDFSRTLAERLVRDITKVLHELDSLPAKLSAKISVKSEENGK-- 467

Query: 61  RNG----KKTAEETGREIASYWRNITKARK 85
            NG    KKTA ET REI +YW+N   A+K
Sbjct: 468 INGTTVVKKTAAETQREITTYWKNFVTAKK 495

[Close]

BLAST of Lsi09G007310 vs. TrEMBL
Match: Q94KK8_TOBAC (Glutamate decarboxylase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-16
Identity = 54/84 (64.29%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+HV+VLRVVIREDFSRTLAERLVLDIVKVL ELDTLP + S K   LE  K  +N
Sbjct: 407 MPADAQHVTVLRVVIREDFSRTLAERLVLDIVKVLHELDTLPARLSAK---LEEVKLVKN 466

Query: 61  GKKTAEETGREIASYWRNITKARK 85
           GKK   E  RE+ +YW+    ARK
Sbjct: 467 GKKFELEVQREVTNYWKKFVLARK 487

[Close]

BLAST of Lsi09G007310 vs. TAIR10
Match: AT2G02010.1 (AT2G02010.1 glutamate decarboxylase 4)

HSP 1 Score: 87.0 bits (214), Expect = 7.0e-18
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+HV+VLRVVIREDFSRTLAERLV D  KVL ELDTLP +   KM    NGK   N
Sbjct: 407 MPADAQHVTVLRVVIREDFSRTLAERLVADFEKVLHELDTLPARVHAKMA---NGKV--N 466

Query: 61  G-KKTAEETGREIASYWRNITKARK 85
           G KKT EET RE+ +YW+ + + +K
Sbjct: 467 GVKKTPEETQREVTAYWKKLLETKK 486

[Close]

BLAST of Lsi09G007310 vs. TAIR10
Match: AT2G02000.1 (AT2G02000.1 glutamate decarboxylase 3)

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-17
Identity = 49/86 (56.98%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+HV+VLRVVIREDFSRTLAERLV D  KVL ELDTLP +   KM S     K   
Sbjct: 407 MPADAQHVTVLRVVIREDFSRTLAERLVADFEKVLHELDTLPARVHAKMAS----GKVNG 466

Query: 61  GKKTAEETGREIASYWRNITKARKIK 87
            KKT EET RE+ +YW+     +  K
Sbjct: 467 VKKTPEETQREVTAYWKKFVDTKTDK 488

[Close]

BLAST of Lsi09G007310 vs. TAIR10
Match: AT1G65960.2 (AT1G65960.2 glutamate decarboxylase 2)

HSP 1 Score: 80.1 bits (196), Expect = 8.6e-16
Identity = 49/84 (58.33%), Postives = 56/84 (66.67%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+H++VLRVVIREDFSRTLAERLV DI KVL ELDTLP K S KMG +E   +   
Sbjct: 406 MPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKISKKMG-IEGIAENVK 465

Query: 61  GKKTAEETGREIASYWRNITKARK 85
            KK  +E   E+   WR   K RK
Sbjct: 466 EKKMEKEILMEVIVGWRKFVKERK 488

[Close]

BLAST of Lsi09G007310 vs. TAIR10
Match: AT5G17330.1 (AT5G17330.1 glutamate decarboxylase)

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-13
Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MP  A+H++VLRVVIREDFSRTLAERLV+DI KV+ ELD LP +   K+ SL   K E N
Sbjct: 407 MPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKI-SLGQEKSESN 466

Query: 61  G-------KKTAEETGREIASYWRNITKARK 85
                   KK+  +  R+I + W+     RK
Sbjct: 467 SDNLMVTVKKSDIDKQRDIITGWKKFVADRK 496

[Close]

BLAST of Lsi09G007310 vs. TAIR10
Match: AT3G17760.1 (AT3G17760.1 glutamate decarboxylase 5)

HSP 1 Score: 61.2 bits (147), Expect = 4.1e-10
Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSG-KMGSLENGKKER 60
           MP  A+H++VLRVVIREDFSR LA+RL+  I++VL E++ LP + +     +  +G  E 
Sbjct: 406 MPADAQHIAVLRVVIREDFSRGLADRLITHIIQVLKEIEGLPSRIAHLAAAAAVSGDDEE 465

Query: 61  NGKKTAEETGREIASYWRNITKARK 85
              KTA+ +  +I  YW+ + + ++
Sbjct: 466 VKVKTAKMSLEDITKYWKRLVEHKR 490

[Close]

BLAST of Lsi09G007310 vs. NCBI nr
Match: gi|778698418|ref|XP_011654530.1| (PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.9e-37
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPK   KM SLENGKKE +
Sbjct: 407 MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKKGEKMESLENGKKETS 466

Query: 61  GKKTAEETGREIASYWRNITKARKIKLAANLASPSVTVVAK 102
           GKK+AEET REIA+YWRNIT ARKIKLAA +A PSVTVVAK
Sbjct: 467 GKKSAEETEREIATYWRNITNARKIKLAATMAGPSVTVVAK 507

[Close]

BLAST of Lsi09G007310 vs. NCBI nr
Match: gi|700194572|gb|KGN49749.1| (Glutamate decarboxylase [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.9e-37
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPK   KM SLENGKKE +
Sbjct: 334 MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKKGEKMESLENGKKETS 393

Query: 61  GKKTAEETGREIASYWRNITKARKIKLAANLASPSVTVVAK 102
           GKK+AEET REIA+YWRNIT ARKIKLAA +A PSVTVVAK
Sbjct: 394 GKKSAEETEREIATYWRNITNARKIKLAATMAGPSVTVVAK 434

[Close]

BLAST of Lsi09G007310 vs. NCBI nr
Match: gi|659072700|ref|XP_008466806.1| (PREDICTED: glutamate decarboxylase 4-like [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 6.4e-37
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNSGKMGSLENGKKERN 60
           MPEGAKHVSVLRVVIREDFSRTLAERLVLDI+KVLAELDTLPPK S KM SLENGK E +
Sbjct: 407 MPEGAKHVSVLRVVIREDFSRTLAERLVLDIIKVLAELDTLPPKKSEKMESLENGKTETS 466

Query: 61  GKKTAEETGREIASYWRNITKARKIKLAANLASPSVTVVAK 102
           GKK+AEET REIA+YWRNIT ARKIKLAA +A PSVTVVAK
Sbjct: 467 GKKSAEETEREIATYWRNITNARKIKLAATMAGPSVTVVAK 507

[Close]

BLAST of Lsi09G007310 vs. NCBI nr
Match: gi|778698422|ref|XP_004151335.2| (PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25
Identity = 73/106 (68.87%), Postives = 83/106 (78.30%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDT---LP--PKNSGKMGSLENG 60
           MPEGAKHV VLRVVIREDFSRTLA+RLV+DIVKV+ ELD+   +P  PK S KM  LENG
Sbjct: 407 MPEGAKHVLVLRVVIREDFSRTLADRLVVDIVKVMGELDSSVPIPPIPKKSEKMVRLENG 466

Query: 61  KKERNGKKTAE-ETGREIASYWRNITKARKIKLAANLASPSVTVVA 101
           +K+R+GKKT E  T REI +YW NIT   KIKLAANL  PSV V+A
Sbjct: 467 QKKRSGKKTGEVTTKREIGAYWGNITTGTKIKLAANLGGPSVNVIA 512

[Close]

BLAST of Lsi09G007310 vs. NCBI nr
Match: gi|659072698|ref|XP_008466797.1| (PREDICTED: LOW QUALITY PROTEIN: glutamate decarboxylase 4-like [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-22
Identity = 70/105 (66.67%), Postives = 79/105 (75.24%), Query Frame = 1


Query: 1   MPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDT---LPPKNSGKMGSLENGKK 60
           MPEGAK V VLRVVIREDFS TL +RLVLDIVKV+ ELD+   +PPK S +M  LE+GKK
Sbjct: 398 MPEGAKDVLVLRVVIREDFSGTLGDRLVLDIVKVMGELDSSIPIPPKKSERMVRLEDGKK 457

Query: 61  ERNGKKTAE-ETGREIASYWRNITKAR-KIKLAANLASPSVTVVA 101
           E + KKTAE  T REI SYW NIT  R K+KLAAN+   SV VVA
Sbjct: 458 ETSEKKTAEVTTKREIGSYWGNITSGRSKVKLAANVGGGSVNVVA 502

The following BLAST results are available for this feature:

BLAST of Lsi09G007310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DCE4_ARATH	1.3e-16	61.18	Glutamate decarboxylase 4 OS=Arabidopsis thaliana GN=GAD4 PE=1 SV=1	[more]
DCE3_ARATH	1.1e-15	56.98	Glutamate decarboxylase 3 OS=Arabidopsis thaliana GN=GAD3 PE=2 SV=1	[more]
DCE2_ARATH	1.5e-14	58.33	Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1	[more]
DCE_PETHY	6.4e-13	51.11	Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1	[more]
DCE1_ARATH	1.6e-11	49.45	Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2	[more]

BLAST of Lsi09G007310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLK1_CUCSA	2.0e-37	87.13	Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G100000 PE=3 SV=1	[more]
A0A0A0KPU6_CUCSA	1.0e-25	68.87	Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G106010 PE=3 SV=1	[more]
B9HJL9_POPTR	3.9e-17	61.70	Glutamate decarboxylase OS=Populus trichocarpa GN=POPTR_0008s14070g PE=3 SV=1	[more]
B9HVP9_POPTR	1.1e-16	64.44	Glutamate decarboxylase OS=Populus trichocarpa GN=POPTR_0010s11070g PE=3 SV=2	[more]
Q94KK8_TOBAC	1.9e-16	64.29	Glutamate decarboxylase OS=Nicotiana tabacum PE=2 SV=1	[more]

BLAST of Lsi09G007310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02010.1	7.0e-18	61.18	glutamate decarboxylase 4	[more]
AT2G02000.1	6.0e-17	56.98	glutamate decarboxylase 3	[more]
AT1G65960.2	8.6e-16	58.33	glutamate decarboxylase 2	[more]
AT5G17330.1	8.9e-13	49.45	glutamate decarboxylase	[more]
AT3G17760.1	4.1e-10	40.00	glutamate decarboxylase 5	[more]

BLAST of Lsi09G007310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778698418\|ref\|XP_011654530.1\|	2.9e-37	87.13	PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus]	[more]
gi\|700194572\|gb\|KGN49749.1\|	2.9e-37	87.13	Glutamate decarboxylase [Cucumis sativus]	[more]
gi\|659072700\|ref\|XP_008466806.1\|	6.4e-37	86.14	PREDICTED: glutamate decarboxylase 4-like [Cucumis melo]	[more]
gi\|778698422\|ref\|XP_004151335.2\|	1.5e-25	68.87	PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus]	[more]
gi\|659072698\|ref\|XP_008466797.1\|	2.6e-22	66.67	PREDICTED: LOW QUALITY PROTEIN: glutamate decarboxylase 4-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0019530	taurine metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G007310.1	Lsi09G007310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11999	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	coord: 4..79 score: 2.4
None	No IPR available	PANTHER	PTHR11999:SF113	GLUTAMATE DECARBOXYLASE 2	coord: 4..79 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G007310	Csa5G100000	Cucumber (Chinese Long) v2	culsiB323
Lsi09G007310	CSPI05G02050	Wild cucumber (PI 183967)	cpilsiB323
Lsi09G007310	Cucsa.377430	Cucumber (Gy14) v1	cgylsiB608
Lsi09G007310	Cucsa.026460	Cucumber (Gy14) v1	cgylsiB622
Lsi09G007310	CmaCh15G008740	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G007310	CmaCh04G021580	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G007310	CmoCh04G022550	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G007310	Cla005831	Watermelon (97103) v1	lsiwmB028
Lsi09G007310	MELO3C005224	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G007310	ClCG01G006890	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G007310	MELO3C005222.2	Melon (DHL92) v3.6.1	lsimedB014
Lsi09G007310	Cla97C01G007270	Watermelon (97103) v2	lsiwmbB007
Lsi09G007310	Bhi12G000874	Wax gourd	lsiwgoB006
Lsi09G007310	Cp4.1LG01g18740	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G007310	Cp4.1LG13g06470	Cucurbita pepo (Zucchini)	cpelsiB130
Lsi09G007310	CsGy5G012170	Cucumber (Gy14) v2	cgyblsiB295
Lsi09G007310	Carg17700	Silver-seed gourd	carlsiB433
Lsi09G007310	Carg01333	Silver-seed gourd	carlsiB754
Lsi09G007310	CsaV3_5G017290	Cucumber (Chinese Long) v3	cuclsiB346

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G007310	Cucurbita moschata (Rifu)	cmolsiB256