Carg01333 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01333
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glutamate decarboxylase
Location	Cucurbita_argyrosperma_scaffold_004 : 271652 .. 271909 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTCCCCGTGGTGGCGTTCAGTCTCAAAGACAGAACTCGCCACGACGAATTCGAGGTGTCAGAAATGTTACGACGGTTCGGGTGGATGGTGCCGGCGTATCCAATGCCAGAGGGGGCCAAGCATGTGTCAGTTCTTCGTATGGTGATTAGAGAAGATTTCTCTCGCACCCTTGCGGGACGTCTTGTGCAGGACATCGTGAAGGTTCTGGGAGAGCTAGACAGTCTTCCACCAAATAAGAACATGGGGTATTAA

mRNA sequence

ATGGGAGTCCCCGTGGTGGCGTTCAGTCTCAAAGACAGAACTCGCCACGACGAATTCGAGGTGTCAGAAATGTTACGACGGTTCGGGTGGATGGTGCCGGCGTATCCAATGCCAGAGGGGGCCAAGCATGTGTCAGTTCTTCGTATGGTGATTAGAGAAGATTTCTCTCGCACCCTTGCGGGACGTCTTGTGCAGGACATCGTGAAGGTTCTGGGAGAGCTAGACAGTCTTCCACCAAATAAGAACATGGGGTATTAA

Coding sequence (CDS)

ATGGGAGTCCCCGTGGTGGCGTTCAGTCTCAAAGACAGAACTCGCCACGACGAATTCGAGGTGTCAGAAATGTTACGACGGTTCGGGTGGATGGTGCCGGCGTATCCAATGCCAGAGGGGGCCAAGCATGTGTCAGTTCTTCGTATGGTGATTAGAGAAGATTTCTCTCGCACCCTTGCGGGACGTCTTGTGCAGGACATCGTGAAGGTTCTGGGAGAGCTAGACAGTCTTCCACCAAATAAGAACATGGGGTATTAA

Protein sequence

MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMGY

Homology

[Close]

BLAST of Carg01333 vs. NCBI nr
Match: XP_022939390.1 (glutamate decarboxylase-like [Cucurbita moschata])

HSP 1 Score: 173.3 bits (438), Expect = 3.5e-40
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 371 MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNKNMG 85
           GRLVQDIVKVLGELDSLPPNKNMG
Sbjct: 431 GRLVQDIVKVLGELDSLPPNKNMG 454

[Close]

BLAST of Carg01333 vs. NCBI nr
Match: XP_008466806.1 (PREDICTED: glutamate decarboxylase 4-like [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-34
Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 371 MGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNKN 83
            RLV DI+KVL ELD+LPP K+
Sbjct: 431 ERLVLDIIKVLAELDTLPPKKS 452

[Close]

BLAST of Carg01333 vs. NCBI nr
Match: KGN49749.1 (Glutamate decarboxylase [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-34
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 298 MGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLA 357

Query: 61  GRLVQDIVKVLGELDSLPPNK 82
            RLV DIVKVL ELD+LPP K
Sbjct: 358 ERLVLDIVKVLAELDTLPPKK 378

[Close]

BLAST of Carg01333 vs. NCBI nr
Match: XP_011654530.1 (PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-34
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 371 MGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNK 82
            RLV DIVKVL ELD+LPP K
Sbjct: 431 ERLVLDIVKVLAELDTLPPKK 451

[Close]

BLAST of Carg01333 vs. NCBI nr
Match: XP_022990874.1 (glutamate decarboxylase 4-like [Cucurbita maxima] >XP_022990886.1 glutamate decarboxylase 4-like [Cucurbita maxima])

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 371 MGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNKNMG 85
            RLV DIVKVL ELD+LPP KN G
Sbjct: 431 ERLVLDIVKVLAELDTLPP-KNSG 453

[Close]

BLAST of Carg01333 vs. TAIR10
Match: AT1G65960.2 (glutamate decarboxylase 2)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVPVVAFSLKD + H+EFE+SEMLRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA 
Sbjct: 371 GVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 430

Query: 62  RLVQDIVKVLGELDSLPP--NKNMG 85
           RLV DI KVL ELD+LP   +K MG
Sbjct: 431 RLVADISKVLHELDTLPSKISKKMG 455

[Close]

BLAST of Carg01333 vs. TAIR10
Match: AT2G02000.1 (glutamate decarboxylase 3)

HSP 1 Score: 123.6 bits (309), Expect = 5.7e-29
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKD +RH+EFEV+EMLRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDSSRHNEFEVAEMLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLP 79
           RLV D  KVL ELD+LP
Sbjct: 432 RLVADFEKVLHELDTLP 448

[Close]

BLAST of Carg01333 vs. TAIR10
Match: AT2G02010.1 (glutamate decarboxylase 4)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-27
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKD +RH+EFEV+  LRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDSSRHNEFEVAHTLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLP 79
           RLV D  KVL ELD+LP
Sbjct: 432 RLVADFEKVLHELDTLP 448

[Close]

BLAST of Carg01333 vs. TAIR10
Match: AT5G17330.1 (glutamate decarboxylase)

HSP 1 Score: 117.9 bits (294), Expect = 3.1e-27
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKD + H EFE+S+MLRR+GW+VPAY MP  A+H++VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLP 79
           RLV DI KV+ ELD LP
Sbjct: 432 RLVIDIEKVMRELDELP 448

[Close]

BLAST of Carg01333 vs. TAIR10
Match: AT3G17760.1 (glutamate decarboxylase 5)

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-24
Identity = 47/78 (60.26%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           +GVP+VAFSLKD ++H  FE++E LR+FGW++PAY MP  A+H++VLR+VIREDFSR LA
Sbjct: 370 IGVPLVAFSLKDSSKHTVFEIAESLRKFGWIIPAYTMPADAQHIAVLRVVIREDFSRGLA 429

Query: 61  GRLVQDIVKVLGELDSLP 79
            RL+  I++VL E++ LP
Sbjct: 430 DRLITHIIQVLKEIEGLP 447

[Close]

BLAST of Carg01333 vs. Swiss-Prot
Match: sp|Q42472|DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=GAD2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-28
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVPVVAFSLKD + H+EFE+SEMLRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA 
Sbjct: 371 GVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 430

Query: 62  RLVQDIVKVLGELDSLPP--NKNMG 85
           RLV DI KVL ELD+LP   +K MG
Sbjct: 431 RLVADISKVLHELDTLPSKISKKMG 455

[Close]

BLAST of Carg01333 vs. Swiss-Prot
Match: sp|Q07346|DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.0e-28
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           +GVP+VAFSLKD  +H+EFE+SE LRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA
Sbjct: 371 IGVPLVAFSLKDNRQHNEFEISETLRRFGWIVPAYTMPPNAQHITVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNKN 83
            RLV+DI KVL ELD+LP   N
Sbjct: 431 ERLVRDIEKVLHELDTLPARVN 452

[Close]

BLAST of Carg01333 vs. Swiss-Prot
Match: sp|Q9ZPS4|DCE3_ARATH (Glutamate decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=GAD3 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-27
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKD +RH+EFEV+EMLRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDSSRHNEFEVAEMLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLP 79
           RLV D  KVL ELD+LP
Sbjct: 432 RLVADFEKVLHELDTLP 448

[Close]

BLAST of Carg01333 vs. Swiss-Prot
Match: sp|Q9ZPS3|DCE4_ARATH (Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-26
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKD +RH+EFEV+  LRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDSSRHNEFEVAHTLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLP 79
           RLV D  KVL ELD+LP
Sbjct: 432 RLVADFEKVLHELDTLP 448

[Close]

BLAST of Carg01333 vs. Swiss-Prot
Match: sp|Q42521|DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 5.7e-26
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKD + H EFE+S+MLRR+GW+VPAY MP  A+H++VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLP 79
           RLV DI KV+ ELD LP
Sbjct: 432 RLVIDIEKVMRELDELP 448

[Close]

BLAST of Carg01333 vs. TrEMBL
Match: tr|A0A1S3CS98|A0A1S3CS98_CUCME (Glutamate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103504126 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-34
Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 371 MGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNKN 83
            RLV DI+KVL ELD+LPP K+
Sbjct: 431 ERLVLDIIKVLAELDTLPPKKS 452

[Close]

BLAST of Carg01333 vs. TrEMBL
Match: tr|A0A0A0KLK1|A0A0A0KLK1_CUCSA (Glutamate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_5G100000 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-34
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA
Sbjct: 298 MGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLA 357

Query: 61  GRLVQDIVKVLGELDSLPPNK 82
            RLV DIVKVL ELD+LPP K
Sbjct: 358 ERLVLDIVKVLAELDTLPPKK 378

[Close]

BLAST of Carg01333 vs. TrEMBL
Match: tr|A0A0A0KPU6|A0A0A0KPU6_CUCSA (Glutamate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_5G106010 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-31
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           MGVPVVAFSLKDR+RHDEF+VSEMLRRFGW+VPAYPMPEGAKHV VLR+VIREDFSRTLA
Sbjct: 371 MGVPVVAFSLKDRSRHDEFKVSEMLRRFGWIVPAYPMPEGAKHVLVLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPP 80
            RLV DIVKV+GELDS  P
Sbjct: 431 DRLVVDIVKVMGELDSSVP 449

[Close]

BLAST of Carg01333 vs. TrEMBL
Match: tr|M0TV25|M0TV25_MUSAM (Glutamate decarboxylase OS=Musa acuminata subsp. malaccensis OX=214687 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.9e-28
Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 2   GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAG 61
           GVP+VAFSLKDR+RHDEFEVS+ LRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA 
Sbjct: 372 GVPLVAFSLKDRSRHDEFEVSDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAE 431

Query: 62  RLVQDIVKVLGELDSLPPNK 82
           RLV D+ KVL ELDSLPP +
Sbjct: 432 RLVMDVQKVLHELDSLPPKQ 451

[Close]

BLAST of Carg01333 vs. TrEMBL
Match: tr|W9S295|W9S295_9ROSA (Glutamate decarboxylase OS=Morus notabilis OX=981085 GN=L484_019262 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.7e-28
Identity = 66/85 (77.65%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1   MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLA 60
           +GVPVVAF LKDR+RHDEFEVSEMLRRFGW+VPAY MP  A+HVS+LR+VIREDFSRTLA
Sbjct: 371 IGVPVVAFCLKDRSRHDEFEVSEMLRRFGWIVPAYTMPADARHVSLLRVVIREDFSRTLA 430

Query: 61  GRLVQDIVKVLGELDSLPPNKNMGY 86
            RLV DI KVL ELD L P KN  Y
Sbjct: 431 ERLVIDITKVLEELDKL-PTKNGDY 454

The following BLAST results are available for this feature:

BLAST of Carg01333 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939390.1	3.5e-40	98.81	glutamate decarboxylase-like [Cucurbita moschata]	[more]
XP_008466806.1	8.3e-34	87.80	PREDICTED: glutamate decarboxylase 4-like [Cucumis melo]	[more]
KGN49749.1	8.3e-34	90.12	Glutamate decarboxylase [Cucumis sativus]	[more]
XP_011654530.1	8.3e-34	90.12	PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus]	[more]
XP_022990874.1	1.1e-33	89.29	glutamate decarboxylase 4-like [Cucurbita maxima] >XP_022990886.1 glutamate deca...	[more]

BLAST of Carg01333 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65960.2	1.5e-29	72.94	glutamate decarboxylase 2	[more]
AT2G02000.1	5.7e-29	76.62	glutamate decarboxylase 3	[more]
AT2G02010.1	1.1e-27	74.03	glutamate decarboxylase 4	[more]
AT5G17330.1	3.1e-27	71.43	glutamate decarboxylase	[more]
AT3G17760.1	1.9e-24	60.26	glutamate decarboxylase 5	[more]

BLAST of Carg01333 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q42472\|DCE2_ARATH	2.7e-28	72.94	Glutamate decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=GAD2 PE=1 SV=1	[more]
sp\|Q07346\|DCE_PETHY	6.0e-28	70.73	Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1	[more]
sp\|Q9ZPS4\|DCE3_ARATH	1.0e-27	76.62	Glutamate decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=GAD3 PE=2 SV=1	[more]
sp\|Q9ZPS3\|DCE4_ARATH	1.9e-26	74.03	Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1	[more]
sp\|Q42521\|DCE1_ARATH	5.7e-26	71.43	Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2	[more]

BLAST of Carg01333 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CS98\|A0A1S3CS98_CUCME	5.5e-34	87.80	Glutamate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103504126 PE=3 SV=1	[more]
tr\|A0A0A0KLK1\|A0A0A0KLK1_CUCSA	5.5e-34	90.12	Glutamate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_5G100000 PE=3 SV=1	[more]
tr\|A0A0A0KPU6\|A0A0A0KPU6_CUCSA	1.9e-31	87.34	Glutamate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_5G106010 PE=3 SV=1	[more]
tr\|M0TV25\|M0TV25_MUSAM	5.9e-28	77.50	Glutamate decarboxylase OS=Musa acuminata subsp. malaccensis OX=214687 PE=3 SV=1	[more]
tr\|W9S295\|W9S295_9ROSA	7.7e-28	77.65	Glutamate decarboxylase OS=Morus notabilis OX=981085 GN=L484_019262 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004351	glutamate decarboxylase activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006536	glutamate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR015424	PyrdxlP-dep_Trfase
IPR010107	Glutamate_decarboxylase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0019530	taurine metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01333-RA	Carg01333-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.90.1150.160		coord: 1..78 e-value: 9.3E-31 score: 107.4
None	No IPR available	PANTHER	PTHR43321:SF2	GLUTAMATE DECARBOXYLASE 3-RELATED	coord: 2..81
IPR010107	Glutamate decarboxylase	PANTHER	PTHR43321	FAMILY NOT NAMED	coord: 2..81
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	SSF53383	PLP-dependent transferases	coord: 3..74

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01333	MELO3C005223	Melon (DHL92) v3.5.1	carmeB0821
Carg01333	CmaCh15G008740	Cucurbita maxima (Rimu)	carcmaB1148
Carg01333	Lsi09G007310	Bottle gourd (USVL1VR-Ls)	carlsiB754
Carg01333	MELO3C005223.2	Melon (DHL92) v3.6.1	carmedB0832
Carg01333	Cla97C01G007270	Watermelon (97103) v2	carwmbB0858
Carg01333	Bhi12G000874	Wax gourd	carwgoB0963

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01333	Carg17700	Silver-seed gourd	carcarB469

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01333	Cucumber (Gy14) v1	carcgyB0959
Carg01333	Cucumber (Gy14) v2	carcgybB0817
Carg01333	Cucurbita maxima (Rimu)	carcmaB1150
Carg01333	Cucurbita moschata (Rifu)	carcmoB1118
Carg01333	Cucurbita moschata (Rifu)	carcmoB1121
Carg01333	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01333	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01333	Wild cucumber (PI 183967)	carcpiB0862
Carg01333	Cucumber (Chinese Long) v2	carcuB0842
Carg01333	Cucumber (Chinese Long) v3	carcucB0866
Carg01333	Melon (DHL92) v3.5.1	carmeB0820
Carg01333	Melon (DHL92) v3.6.1	carmedB0831
Carg01333	Watermelon (Charleston Gray)	carwcgB0800
Carg01333	Watermelon (97103) v1	carwmB0830