Lsi09G006130 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G006130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant-specific domain TIGR01570 family protein
Location	chr09 : 6689160 .. 6691128 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAATTCTTCACACGACTCCTTCTCCTTCTCCCGGAGATACTATTTCAACTTCAACAAAACCAAACACAACAATAACCAAGACGGCAATGAAGACGACCATCAAATCCTAACCTTCAAGCCTCCCAAACACAAACATGCCGTCGTTTCCATCTCCAAGCTCCGCTCCGCCATCGCATTGCTCGGGATCAAGAGCCGATCGTGTCGAGTCGTGGGGACGATATTCGGGCACAGACGAGGGCACGTGCATTTCTCAGTGCAAACGGAGGGAAGCGCAAAGCCAATGTTCTTGGTGGAGCTAGCGATGCCGACGACAGCACTCGTTCGGGAGATGGCATCGGGGGTGGCGAGGATCGCGTTGGAGTGCGAGAGAGGAGAGAAAAGGGAACTGAATGAAGAGGGGATATGGAGAGCGTATTGCAATGGGAAAAAGTATGGAATTGCACATAGGTTCGAGTGTGGAGCAGAAGAATGGAGGATTCTTAGAGCCGTTGGGCCCATAACGGTTGGAGCTGGAGTGTTGCCTGGGAGTGGGGAGGCAGCTGGTGAAGGTGAAGTGATGTTTATGAGAGCTAGTTTTGAGAGGGTTGTGGGTTCAAGGGATTCAGAAGCTTTTTACATGATTAACCCACATGGGGTTGGAGGCCCTGAGCTTAGTATTTTCTTGCTCAGGATTTGATGTATTCTTTGTTTCTCATCTAGACTACACCCATCTTCATATGCATCTCTTTCAATCACACAAAAGGTAACATTAAAAAAATATCTTTTTTCGAAAAAAGAAAAGTTTGTTATGTGACAACTTACTATGGAAGTAGTTTGGAATGCATCCAAGTATTTTTCTTTTCATAATGTTTGCCTACGTGATCATTTTGGATGAGTGAAACTATTTATATCCGTTTTTAATTAAGCTTTGTAGAGAAGGTTTTATATTCATGTAAGATATAGAGAGGAGTTTTGCAACAATAATATGTATGTTAAATATGAGTATATTTCAATAACAAATATAATAATCTTCTTGTTTTGGAGACTCTCATTCATTCATTTAATTTCAGATATATCAAAGATCAATTTTTAATTTTTTTTTTTTTTTTTTTTTTATGATTCGATTAAGCTAAGTCAAGTAAAATTGCCTCTTAAAAGCATAATTAAATTGAAGGTACCTTTAGAAAATACTATTTTAGAGTAAGATTCATTTTTGGATAGTCACGAGATTTAAACTTAATAATCTATATTTGATTTTTAGATTTTCAAAACTATAAACTTATTTCTATATTTGATTTTTAAGTGATATTTTAGATTTTAGATTTTGATTTTTAATTGGTACTTGAAGTTTGAAATTAATTTTTAAATGATATAGGTAAAATCGAGACCTAATAAAATAAATGATGTGTGGTAAACCAGAACTAAACTTTGATGATACACATTTTTTAAATGAGTAAAAAAAATTTACATTTTTATTTTTATAGTTAGAGTTGGAGTAAATGGAAAAGAGATTTTGTCTTAATCACTATTAAAGATGTTCAAAGAGATATGTATAGATACATGATAAGACAAGGACAAAAGAAATATTTAAAAAAAATAAGAGGAATAGTCAAAGAGAATGTATATATAGGATTGTTGTTAAATATTTAGATATATCACTATGTTAAACATTTGTTTAAGTGTATATAATATATTATCAGGTATATTGTATCTACGTCTATTATTATATTTCATACATTATTTGATTACACATGTAATGCATTATATAGATAACAATACTGTTCTAATTGTACATCACGAACATTTCAATGAAAAGGATAATTTCGTAGATTATAAAGTAGTTGAAAATGTTTTAGCATCCTCAAATTTCCTTTTCTCAGCTGTTACAATAATCAATAGTTGTAAGATAAGGAGTGTAGGCAATTTTGACACCCTTGAGATATTTGCTTTTATAGGATCTAGATACTTCATGGAGAAGGATTTGA

mRNA sequence

ATGGCCAATTCTTCACACGACTCCTTCTCCTTCTCCCGGAGATACTATTTCAACTTCAACAAAACCAAACACAACAATAACCAAGACGGCAATGAAGACGACCATCAAATCCTAACCTTCAAGCCTCCCAAACACAAACATGCCGTCGTTTCCATCTCCAAGCTCCGCTCCGCCATCGCATTGCTCGGGATCAAGAGCCGATCGTGTCGAGTCGTGGGGACGATATTCGGGCACAGACGAGGGCACGTGCATTTCTCAGTGCAAACGGAGGGAAGCGCAAAGCCAATGTTCTTGGTGGAGCTAGCGATGCCGACGACAGCACTCGTTCGGGAGATGGCATCGGGGGTGGCGAGGATCGCGTTGGAGTGCGAGAGAGGAGAGAAAAGGGAACTGAATGAAGAGGGGATATGGAGAGCGTATTGCAATGGGAAAAAGTATGGAATTGCACATAGGTTCGAGTGTGGAGCAGAAGAATGGAGGATTCTTAGAGCCGTTGGGCCCATAACGGTTGGAGCTGGAGTGTTGCCTGGGAGTGGGGAGGCAGCTGGTGAAGGTGAAGTGATGTTTATGAGAGCTAGTTTTGAGAGGGTTGTGGGTTCAAGGGATTCAGAAGCTTTTTACATGATTAACCCACATGGGGATCTAGATACTTCATGGAGAAGGATTTGA

Coding sequence (CDS)

ATGGCCAATTCTTCACACGACTCCTTCTCCTTCTCCCGGAGATACTATTTCAACTTCAACAAAACCAAACACAACAATAACCAAGACGGCAATGAAGACGACCATCAAATCCTAACCTTCAAGCCTCCCAAACACAAACATGCCGTCGTTTCCATCTCCAAGCTCCGCTCCGCCATCGCATTGCTCGGGATCAAGAGCCGATCGTGTCGAGTCGTGGGGACGATATTCGGGCACAGACGAGGGCACGTGCATTTCTCAGTGCAAACGGAGGGAAGCGCAAAGCCAATGTTCTTGGTGGAGCTAGCGATGCCGACGACAGCACTCGTTCGGGAGATGGCATCGGGGGTGGCGAGGATCGCGTTGGAGTGCGAGAGAGGAGAGAAAAGGGAACTGAATGAAGAGGGGATATGGAGAGCGTATTGCAATGGGAAAAAGTATGGAATTGCACATAGGTTCGAGTGTGGAGCAGAAGAATGGAGGATTCTTAGAGCCGTTGGGCCCATAACGGTTGGAGCTGGAGTGTTGCCTGGGAGTGGGGAGGCAGCTGGTGAAGGTGAAGTGATGTTTATGAGAGCTAGTTTTGAGAGGGTTGTGGGTTCAAGGGATTCAGAAGCTTTTTACATGATTAACCCACATGGGGATCTAGATACTTCATGGAGAAGGATTTGA

Protein sequence

MANSSHDSFSFSRRYYFNFNKTKHNNNQDGNEDDHQILTFKPPKHKHAVVSISKLRSAIALLGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKRELNEEGIWRAYCNGKKYGIAHRFECGAEEWRILRAVGPITVGAGVLPGSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINPHGDLDTSWRRI

Homology

[Close]

BLAST of Lsi09G006130 vs. Swiss-Prot
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.0e-36
Identity = 81/174 (46.55%), Postives = 109/174 (62.64%), Query Frame = 1


Query: 51  SISKLRSAIALLGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVR 110
           S+S    ++   G  S   RV GT++GH+RGHV FSVQ    + P+ L++LAM T  LV+
Sbjct: 109 SVSNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVK 168

Query: 111 EMASGVARIALECERGEK--RELNEEGIWRAYCNGKK--YGIAHRFECGAEEWRILRAVG 170
           EM+SG+ RIALECE+  +   +L +E  W  YCNG+K  Y ++    C   +WR+L  V 
Sbjct: 169 EMSSGLVRIALECEKRHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVS 228

Query: 171 PITVGAGVLP---------GSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINP 212
            +TVGAGV+P         G G     GE+++MR  FERVVGSRDSEAFYM+NP
Sbjct: 229 RVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNP 282

[Close]

BLAST of Lsi09G006130 vs. TrEMBL
Match: A0A0A0KT21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577380 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-93
Identity = 188/225 (83.56%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MANSS-HDSFSFSRRY--YFNFNK-TKHNNNQ--DGNEDDHQILTFKPPKHKHAV-VSIS 60
           MANSS HDSFSFS+RY  YFNFNK TKHN+NQ  D  +D HQILT  PPKHKH   VS+S
Sbjct: 5   MANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTAVSVS 64

Query: 61  KLRSAIAL-LGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM 120
           KLRSAIAL  GI++RSCRV+GTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM
Sbjct: 65  KLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM 124

Query: 121 ASGVARIALECERGEKR----ELNEEGIWRAYCNGKKYGIAHRFECGAEEWRILRAVGPI 180
           ASGVARIALECERGEK+    ELNEEGIWRAYCNGKKYG+AHRFECGAEEWRILRAVGPI
Sbjct: 125 ASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRAVGPI 184

Query: 181 TVGAGVLPGSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINPHG 214
           TVGAGVLPG  E   EGEVMFMRA FERVVGS+DSEAFYMINP G
Sbjct: 185 TVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDG 229

[Close]

BLAST of Lsi09G006130 vs. TrEMBL
Match: A0A068TWB9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032530001 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.7e-55
Identity = 127/247 (51.42%), Postives = 163/247 (65.99%), Query Frame = 1


Query: 1   MANSSHDSFSFSRRYYFNFNKTKHNNNQD------------------GNEDDHQI----L 60
           MA + H+SFSFSRRY FNF K   + + +                  G + D  +    L
Sbjct: 5   MAKNPHESFSFSRRY-FNFRKKVEDEDDEEEIFAFSSSSLGCEEELKGIDQDISLSMHTL 64

Query: 61  TFKPPKHKHAVVSISKLRSAIALLGIKSRS------CRVVGTIFGHRRGHVHFSVQTEGS 120
             KPPK K   +++SKLR+A A  G K+RS       +VVGT+FG+RRGHVHF+ Q +  
Sbjct: 65  PVKPPKKKLTSLAVSKLRAAFAF-GNKNRSRFSGLGTKVVGTLFGYRRGHVHFAFQEDPK 124

Query: 121 AKPMFLVELAMPTTALVREMASGVARIALECERGEKRELN-----EEGIWRAYCNGKKYG 180
             P FLVELA PT+ L++EMASG+ RIALEC+R    + N     EE IWR YCNG+K G
Sbjct: 125 LSPAFLVELATPTSVLIKEMASGLVRIALECDRKTTEKKNVKPLLEEQIWRTYCNGRKCG 184

Query: 181 IAHRFECGAEEWRILRAVGPITVGAGVLPGSGEAAG-EGEVMFMRASFERVVGSRDSEAF 214
            A R ECGAEEW++L ++GPI++GAGVLPG+G+  G EGE+M+MRA FERVVGS+DSEAF
Sbjct: 185 YATRRECGAEEWKVLNSIGPISMGAGVLPGAGKGDGSEGELMYMRAKFERVVGSKDSEAF 244

[Close]

BLAST of Lsi09G006130 vs. TrEMBL
Match: A0A0D2U5M6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G187800 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54
Identity = 128/252 (50.79%), Postives = 165/252 (65.48%), Query Frame = 1


Query: 2   ANSSHDS-FSFSRRYYFNFNKTKHNNNQDGNEDDHQILTFK------------------- 61
           A S HDS FSFSRRY FN+ K      +D ++++ +ILTF                    
Sbjct: 6   AKSPHDSSFSFSRRY-FNWKKKV----EDDDDNEEEILTFSSSSHFCEEAKEAEELRIPV 65

Query: 62  --------PPKHKHAVVSISKLRSAIALLGIKSRS------CRVVGTIFGHRRGHVHFSV 121
                   PP+ K  +VS+S+LRSA+++ G  + +       RVVGT+FG+RRGHVHF+ 
Sbjct: 66  ASRVSLVPPPRKKLPIVSVSRLRSALSVFGKNTSAYRSGLGTRVVGTLFGYRRGHVHFAF 125

Query: 122 QTEGSAKPMFLVELAMPTTALVREMASGVARIALECER--GEKR-ELNEEGIWRAYCNGK 181
           Q E    P FL++LA PT+ LVREMASG+ RIALECE+  G+K  +L  E +WR YCNGK
Sbjct: 126 QEEAKVSPAFLIQLATPTSVLVREMASGLVRIALECEKTMGKKGVKLLNEPVWRTYCNGK 185

Query: 182 KYGIAHRFECGAEEWRILRAVGPITVGAGVLPGS---GEAAGEGEVMFMRASFERVVGSR 214
           K G A R ECGAEEW++L+AV PI++GAGVLPG+     A  EGE+M+MRA FERVVGS+
Sbjct: 186 KCGFAMRRECGAEEWKVLKAVEPISMGAGVLPGNCNDNGAGSEGELMYMRAKFERVVGSK 245

[Close]

BLAST of Lsi09G006130 vs. TrEMBL
Match: A0A061EIU6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011889 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.8e-54
Identity = 132/250 (52.80%), Postives = 166/250 (66.40%), Query Frame = 1


Query: 2   ANSSHDS-FSFSRRYYFNFNKTKHNNNQDGNEDDHQILTFKP------------------ 61
           A S HDS FSFSRRY FN+ K       + ++D+ +ILTF                    
Sbjct: 6   AKSPHDSSFSFSRRY-FNWKK-----KVEDDDDEEEILTFSSSSHFCEEAEELRVPVPSQ 65

Query: 62  ------PKHKHAVVSISKLRSAIALLGIKSRSC-------RVVGTIFGHRRGHVHFSVQT 121
                 P+ K  +V++SKLRSA+A+ G K+RS        RVVGT+FG+RRGHVHF+ Q 
Sbjct: 66  VSLVPAPRKKLPIVAVSKLRSALAVFG-KNRSAYRSGLGTRVVGTLFGYRRGHVHFAFQE 125

Query: 122 EGSAKPMFLVELAMPTTALVREMASGVARIALECER--GEKR-ELNEEGIWRAYCNGKKY 181
           E  + P FL+ELA PT+ LVREMASG+ RIALECE+  G+K  +L EE +WR YCNGKK 
Sbjct: 126 EAKSSPAFLIELATPTSVLVREMASGLVRIALECEKKTGKKGVKLLEEPVWRTYCNGKKC 185

Query: 182 GIAHRFECGAEEWRILRAVGPITVGAGVLPGS--GEAAG-EGEVMFMRASFERVVGSRDS 214
           G A R  CG  EW++L+AV PI++GAGVLPG+  G  AG EGE+M+MRA FERVVGS+DS
Sbjct: 186 GFAMRRACGPGEWKVLKAVEPISMGAGVLPGNCDGNGAGSEGELMYMRARFERVVGSKDS 245

[Close]

BLAST of Lsi09G006130 vs. TrEMBL
Match: B9HIX2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s11360g PE=4 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-53
Identity = 124/248 (50.00%), Postives = 159/248 (64.11%), Query Frame = 1


Query: 1   MANSSHDS-FSFSRRYYFNFNKTKHNNNQDGNEDDHQILTFK------------------ 60
           MA + HDS FSFSRRY+    K      +D  +DD +ILTF                   
Sbjct: 5   MAKNPHDSSFSFSRRYFNRGKKVV----EDEEDDDEEILTFNSFSHCSEELKDDQELRIT 64

Query: 61  ---------PPKHKHAVVSISKLRSAIALLGIKS---RSCRVVGTIFGHRRGHVHFSVQT 120
                    P K    +V++SKLRSA+ +L  +S      RV+GT+FG+RRGHVHFS Q 
Sbjct: 65  LPAGAIQPAPRKKTLPIVAVSKLRSALTVLSGRSGYHSGTRVIGTLFGYRRGHVHFSFQE 124

Query: 121 EGSAKPMFLVELAMPTTALVREMASGVARIALECER--GEKR-ELNEEGIWRAYCNGKKY 180
           +    P FL+ELA PT+ LVREMASG+ RIALECE+  G+K  +L EE +WR YCNGKK 
Sbjct: 125 DAKQNPAFLIELATPTSILVREMASGLVRIALECEKKAGKKAGKLLEEPLWRTYCNGKKC 184

Query: 181 GIAHRFECGAEEWRILRAVGPITVGAGVLPGSGEAAGE-GEVMFMRASFERVVGSRDSEA 214
           G A R EC  E+W++L+AV P+++GAGVLPG+G    E GE+M+MRA +ERVVGS+DSEA
Sbjct: 185 GYATRRECRPEDWKVLKAVEPVSMGAGVLPGNGATGSEIGEIMYMRARYERVVGSKDSEA 244

[Close]

BLAST of Lsi09G006130 vs. TAIR10
Match: AT3G25640.1 (AT3G25640.1 Protein of unknown function, DUF617)

HSP 1 Score: 181.0 bits (458), Expect = 7.9e-46
Identity = 115/249 (46.18%), Postives = 151/249 (60.64%), Query Frame = 1


Query: 1   MANSSHDS-FSFSRRYYFNFNKTKHNNNQDGNEDDHQ---------ILT--------FKP 60
           +AN+S DS FS S+RY FN+ K K   + D  E++ +         +LT         +P
Sbjct: 5   LANTSLDSSFSLSKRY-FNWKKKKVQEDDDEEEEEEEDDYNHNEKKVLTRFNFSSDPTRP 64

Query: 61  PKH-------KHAVVSISKLRSAIALLGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKP 120
            +        K    ++ K+R A+          RVVGT+FG+RRGHV+F+VQ + +  P
Sbjct: 65  DQFNAQQIMKKKKKKTLEKIRYALGFSN-SGLGFRVVGTLFGNRRGHVYFAVQDDPTRLP 124

Query: 121 MFLVELAMPTTALVREMASGVARIALEC---ERGEKRELNEEGIWRAYCNGKKYGIAHRF 180
             L++L  PT+ LVREMASG+ RIALE    +   K++L EE  WR YCNGKK G A R 
Sbjct: 125 AVLIQLPTPTSVLVREMASGLVRIALETAAYKTDSKKKLLEESTWRTYCNGKKCGYAARK 184

Query: 181 ECGAEEWRILRAVGPITVGAGVLP---------GSGEAAGE-GEVMFMRASFERVVGSRD 212
           ECG  EW++L+AVGPIT+GAGVLP         G+G    E GE+M+MRA FERVVGSRD
Sbjct: 185 ECGEAEWKVLKAVGPITMGAGVLPATTTTVDEEGNGAVGSEKGELMYMRARFERVVGSRD 244

[Close]

BLAST of Lsi09G006130 vs. TAIR10
Match: AT5G23100.1 (AT5G23100.1 Protein of unknown function, DUF617)

HSP 1 Score: 174.5 bits (441), Expect = 7.4e-44
Identity = 105/257 (40.86%), Postives = 144/257 (56.03%), Query Frame = 1


Query: 2   ANSSHDSFSFSRRYYFNFNKT--------KHNNNQDGNEDDHQILTFKPPKHKHAVVSIS 61
           A+  H+SF ++R+   + N           HNN +  +            K K    ++S
Sbjct: 6   ASKRHNSFHWTRKVGSDENDDVSSHKPLPHHNNTKPSSSSSSSSSNVITHKKKLQSFAVS 65

Query: 62  KLRSAIALLGI-------KSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTT 121
           +LRS IA L              RVVGT+FG RRGHVHFS+Q + ++ P FL+ELA P +
Sbjct: 66  RLRSVIATLSRARPGNQNSGLGSRVVGTLFGSRRGHVHFSIQKDPNSPPAFLIELATPIS 125

Query: 122 ALVREMASGVARIALECERGEK----------------------------RELNEEGIWR 181
            LV+EMASG+ RIALEC++G++                            R L EE +WR
Sbjct: 126 GLVKEMASGLVRIALECDKGKEEEEGEEKNGTLRHGGGDKTKTTTTAAVSRRLVEEPMWR 185

Query: 182 AYCNGKKYGIAHRFECGAEEWRILRAVGPITVGAGVLPGS----GEAAGEGEVMFMRASF 212
            YCNGKK G A R ECG +E ++L+A+  +++GAGVLP +    G   G G++M+MRA F
Sbjct: 186 TYCNGKKCGFATRRECGEKEKKVLKALEMVSMGAGVLPETEEIGGGGGGGGDIMYMRAKF 245

[Close]

BLAST of Lsi09G006130 vs. TAIR10
Match: AT2G41660.1 (AT2G41660.1 Protein of unknown function, DUF617)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-37
Identity = 81/174 (46.55%), Postives = 109/174 (62.64%), Query Frame = 1


Query: 51  SISKLRSAIALLGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVR 110
           S+S    ++   G  S   RV GT++GH+RGHV FSVQ    + P+ L++LAM T  LV+
Sbjct: 109 SVSNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVK 168

Query: 111 EMASGVARIALECERGEK--RELNEEGIWRAYCNGKK--YGIAHRFECGAEEWRILRAVG 170
           EM+SG+ RIALECE+  +   +L +E  W  YCNG+K  Y ++    C   +WR+L  V 
Sbjct: 169 EMSSGLVRIALECEKRHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVS 228

Query: 171 PITVGAGVLP---------GSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINP 212
            +TVGAGV+P         G G     GE+++MR  FERVVGSRDSEAFYM+NP
Sbjct: 229 RVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNP 282

[Close]

BLAST of Lsi09G006130 vs. TAIR10
Match: AT4G39610.1 (AT4G39610.1 Protein of unknown function, DUF617)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 67/157 (42.68%), Postives = 102/157 (64.97%), Query Frame = 1


Query: 70  RVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECER---- 129
           R+ GT+FG+R+G V  S+Q      P  +VELAM TT L +E+++G+ RIALE E+    
Sbjct: 96  RITGTLFGYRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRA 155

Query: 130 -------GEKRELNEEGIWRAYCNGKKYGIAHRFECGAEEWRILRAVGPITVGAGVLPGS 189
                   +K ++ EE +W  YC G+K G   + E   E+  ++  + P+++GAGVLPG+
Sbjct: 156 DNNNSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLPGN 215

Query: 190 GEAAG-EGEVMFMRASFERVVGSRDSEAFYMINPHGD 215
            E+ G +GE+ +MRA FERV+GS+DSE FYM++P G+
Sbjct: 216 SESEGPDGEMAYMRAYFERVIGSKDSETFYMLSPEGN 252

[Close]

BLAST of Lsi09G006130 vs. TAIR10
Match: AT1G76610.1 (AT1G76610.1 Protein of unknown function, DUF617)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 1


Query: 42  PPKHKHAVVSISKLRSAIALLGIKSRSCRVVGTIFGHRRGHVHFSVQ--TEGSAKPMFLV 101
           PP  ++  VS+S   S+    G+      V GT +GHRRGHV F +Q  T  S+ P+ L+
Sbjct: 52  PPTDQNDTVSVSSSTSSSDQTGVV-----VTGTFYGHRRGHVSFCLQDDTRPSSPPLLLL 111

Query: 102 ELAMPTTALVREMASGVARIALECERGEKRELNEEGIWRAYCNGKKYGIAHRFECGAEEW 161
           ELA+PT AL REM  G  RIAL  +   +  +    +W  YCNG+K+G A R E    + 
Sbjct: 112 ELAVPTAALAREMEEGFLRIALRSKSNRRSSIFNVPVWSMYCNGRKFGFAVRRETTENDV 171

Query: 162 RILRAVGPITVGAGVLPGSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINPHG 214
             LR +  ++VGAGV+P        GE +++RA FERV GS DSE+F+M+N  G
Sbjct: 172 GFLRLMQSVSVGAGVIP-------NGETLYLRAKFERVTGSSDSESFHMVNQGG 213

[Close]

BLAST of Lsi09G006130 vs. NCBI nr
Match: gi|659072984|ref|XP_008467200.1| (PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis melo])

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-94
Identity = 190/225 (84.44%), Postives = 200/225 (88.89%), Query Frame = 1


Query: 1   MANSS-HDSFSFSRRY--YFNFNK-TKHNNNQDGNEDD--HQILTFKPPKHKHA-VVSIS 60
           MANSS HDSFSFS+RY  YFNFNK TKHN+NQ   E+D  HQILT  PPKHKH  VVS+S
Sbjct: 5   MANSSSHDSFSFSKRYNNYFNFNKNTKHNHNQHQEEEDDHHQILTVNPPKHKHTTVVSVS 64

Query: 61  KLRSAIAL-LGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM 120
           KLRSAIAL  GI++RSCRV+GTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM
Sbjct: 65  KLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM 124

Query: 121 ASGVARIALECERGEKR----ELNEEGIWRAYCNGKKYGIAHRFECGAEEWRILRAVGPI 180
           ASGVARIALECERGEK+    ELNEEGIWR+YCNGKKYGIAHRFECGAEEWRILRAVGPI
Sbjct: 125 ASGVARIALECERGEKKKKKGELNEEGIWRSYCNGKKYGIAHRFECGAEEWRILRAVGPI 184

Query: 181 TVGAGVLPGSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINPHG 214
           TVGAGVLPG  E  GEGEVMFMRA FERVVGS+DSEAFYMINP G
Sbjct: 185 TVGAGVLPGIEEGGGEGEVMFMRARFERVVGSKDSEAFYMINPDG 229

[Close]

BLAST of Lsi09G006130 vs. NCBI nr
Match: gi|778704175|ref|XP_004147139.2| (PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.6e-93
Identity = 188/225 (83.56%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MANSS-HDSFSFSRRY--YFNFNK-TKHNNNQ--DGNEDDHQILTFKPPKHKHAV-VSIS 60
           MANSS HDSFSFS+RY  YFNFNK TKHN+NQ  D  +D HQILT  PPKHKH   VS+S
Sbjct: 5   MANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTAVSVS 64

Query: 61  KLRSAIAL-LGIKSRSCRVVGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM 120
           KLRSAIAL  GI++RSCRV+GTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM
Sbjct: 65  KLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREM 124

Query: 121 ASGVARIALECERGEKR----ELNEEGIWRAYCNGKKYGIAHRFECGAEEWRILRAVGPI 180
           ASGVARIALECERGEK+    ELNEEGIWRAYCNGKKYG+AHRFECGAEEWRILRAVGPI
Sbjct: 125 ASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRAVGPI 184

Query: 181 TVGAGVLPGSGEAAGEGEVMFMRASFERVVGSRDSEAFYMINPHG 214
           TVGAGVLPG  E   EGEVMFMRA FERVVGS+DSEAFYMINP G
Sbjct: 185 TVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDG 229

[Close]

BLAST of Lsi09G006130 vs. NCBI nr
Match: gi|661895978|emb|CDP00556.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 222.6 bits (566), Expect = 6.7e-55
Identity = 127/247 (51.42%), Postives = 163/247 (65.99%), Query Frame = 1


Query: 1   MANSSHDSFSFSRRYYFNFNKTKHNNNQD------------------GNEDDHQI----L 60
           MA + H+SFSFSRRY FNF K   + + +                  G + D  +    L
Sbjct: 5   MAKNPHESFSFSRRY-FNFRKKVEDEDDEEEIFAFSSSSLGCEEELKGIDQDISLSMHTL 64

Query: 61  TFKPPKHKHAVVSISKLRSAIALLGIKSRS------CRVVGTIFGHRRGHVHFSVQTEGS 120
             KPPK K   +++SKLR+A A  G K+RS       +VVGT+FG+RRGHVHF+ Q +  
Sbjct: 65  PVKPPKKKLTSLAVSKLRAAFAF-GNKNRSRFSGLGTKVVGTLFGYRRGHVHFAFQEDPK 124

Query: 121 AKPMFLVELAMPTTALVREMASGVARIALECERGEKRELN-----EEGIWRAYCNGKKYG 180
             P FLVELA PT+ L++EMASG+ RIALEC+R    + N     EE IWR YCNG+K G
Sbjct: 125 LSPAFLVELATPTSVLIKEMASGLVRIALECDRKTTEKKNVKPLLEEQIWRTYCNGRKCG 184

Query: 181 IAHRFECGAEEWRILRAVGPITVGAGVLPGSGEAAG-EGEVMFMRASFERVVGSRDSEAF 214
            A R ECGAEEW++L ++GPI++GAGVLPG+G+  G EGE+M+MRA FERVVGS+DSEAF
Sbjct: 185 YATRRECGAEEWKVLNSIGPISMGAGVLPGAGKGDGSEGELMYMRAKFERVVGSKDSEAF 244

[Close]

BLAST of Lsi09G006130 vs. NCBI nr
Match: gi|645276146|ref|XP_008243149.1| (PREDICTED: protein MIZU-KUSSEI 1 [Prunus mume])

HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54
Identity = 129/254 (50.79%), Postives = 163/254 (64.17%), Query Frame = 1


Query: 1   MANSSHDS-FSFSRRYYFNFNKTKHNNNQDGNEDDHQILTFKP----------------- 60
           MA + HDS FSFSRRY+    K      +D  EDDH+IL F                   
Sbjct: 5   MAKTPHDSSFSFSRRYFHWKKKV-----EDDEEDDHEILNFNSSYSHFSEESEKDEQELR 64

Query: 61  --------------PKHKHAVVSISKLRSAIALLGIKSRS-----CRVVGTIFGHRRGHV 120
                         P+ KH+++S+SKLRSA+ + G KSRS      RV+GT+FG+RRGHV
Sbjct: 65  IPVPTDTALIPAIIPRKKHSLMSVSKLRSALTVFG-KSRSRSGLGTRVMGTLFGYRRGHV 124

Query: 121 HFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECE-RGEKRELN--EEGIWRAY 180
           H + Q E    P FL+ELA PT+ LVREMASG+ RIALECE + EK+ L   EE +WR Y
Sbjct: 125 HLAFQEEPKLSPAFLIELATPTSVLVREMASGLVRIALECEKKTEKKGLKMLEEPLWRTY 184

Query: 181 CNGKKYGIAHRFECGAEEWRILRAVGPITVGAGVLPGSGEAAG-EGEVMFMRASFERVVG 214
           CNGKK G A + +CG  EW++L+A+ PI++GAGVLPGS +  G EGE+M+MRA FERVVG
Sbjct: 185 CNGKKCGFAMKRDCGPGEWKVLKALEPISMGAGVLPGSEDGVGAEGELMYMRAKFERVVG 244

[Close]

BLAST of Lsi09G006130 vs. NCBI nr
Match: gi|823211803|ref|XP_012438673.1| (PREDICTED: protein MIZU-KUSSEI 1 [Gossypium raimondii])

HSP 1 Score: 220.7 bits (561), Expect = 2.5e-54
Identity = 128/252 (50.79%), Postives = 165/252 (65.48%), Query Frame = 1


Query: 2   ANSSHDS-FSFSRRYYFNFNKTKHNNNQDGNEDDHQILTFK------------------- 61
           A S HDS FSFSRRY FN+ K      +D ++++ +ILTF                    
Sbjct: 6   AKSPHDSSFSFSRRY-FNWKKKV----EDDDDNEEEILTFSSSSHFCEEAKEAEELRIPV 65

Query: 62  --------PPKHKHAVVSISKLRSAIALLGIKSRS------CRVVGTIFGHRRGHVHFSV 121
                   PP+ K  +VS+S+LRSA+++ G  + +       RVVGT+FG+RRGHVHF+ 
Sbjct: 66  ASRVSLVPPPRKKLPIVSVSRLRSALSVFGKNTSAYRSGLGTRVVGTLFGYRRGHVHFAF 125

Query: 122 QTEGSAKPMFLVELAMPTTALVREMASGVARIALECER--GEKR-ELNEEGIWRAYCNGK 181
           Q E    P FL++LA PT+ LVREMASG+ RIALECE+  G+K  +L  E +WR YCNGK
Sbjct: 126 QEEAKVSPAFLIQLATPTSVLVREMASGLVRIALECEKTMGKKGVKLLNEPVWRTYCNGK 185

Query: 182 KYGIAHRFECGAEEWRILRAVGPITVGAGVLPGS---GEAAGEGEVMFMRASFERVVGSR 214
           K G A R ECGAEEW++L+AV PI++GAGVLPG+     A  EGE+M+MRA FERVVGS+
Sbjct: 186 KCGFAMRRECGAEEWKVLKAVEPISMGAGVLPGNCNDNGAGSEGELMYMRAKFERVVGSK 245

The following BLAST results are available for this feature:

BLAST of Lsi09G006130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MIZ1_ARATH	7.0e-36	46.55	Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1	[more]

BLAST of Lsi09G006130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT21_CUCSA	1.1e-93	83.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577380 PE=4 SV=1	[more]
A0A068TWB9_COFCA	4.7e-55	51.42	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032530001 PE=4 SV=1	[more]
A0A0D2U5M6_GOSRA	1.8e-54	50.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G187800 PE=4 SV=1	[more]
A0A061EIU6_THECC	8.8e-54	52.80	Uncharacterized protein OS=Theobroma cacao GN=TCM_011889 PE=4 SV=1	[more]
B9HIX2_POPTR	5.7e-53	50.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s11360g PE=4 SV=2	[more]

BLAST of Lsi09G006130 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25640.1	7.9e-46	46.18	Protein of unknown function, DUF617	[more]
AT5G23100.1	7.4e-44	40.86	Protein of unknown function, DUF617	[more]
AT2G41660.1	3.9e-37	46.55	Protein of unknown function, DUF617	[more]
AT4G39610.1	1.7e-32	42.68	Protein of unknown function, DUF617	[more]
AT1G76610.1	1.4e-31	41.95	Protein of unknown function, DUF617	[more]

BLAST of Lsi09G006130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072984\|ref\|XP_008467200.1\|	1.1e-94	84.44	PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis melo]	[more]
gi\|778704175\|ref\|XP_004147139.2\|	1.6e-93	83.56	PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis sativus]	[more]
gi\|661895978\|emb\|CDP00556.1\|	6.7e-55	51.42	unnamed protein product [Coffea canephora]	[more]
gi\|645276146\|ref\|XP_008243149.1\|	1.5e-54	50.79	PREDICTED: protein MIZU-KUSSEI 1 [Prunus mume]	[more]
gi\|823211803\|ref\|XP_012438673.1\|	2.5e-54	50.79	PREDICTED: protein MIZU-KUSSEI 1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006460	MIZ1-like_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G006130.1	Lsi09G006130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006460	Protein of unknown function DUF617, plant	PFAM	PF04759	DUF617	coord: 71..214 score: 2.2
IPR006460	Protein of unknown function DUF617, plant	TIGRFAMs	TIGR01570	TIGR01570	coord: 71..214 score: 3.8
None	No IPR available	PANTHER	PTHR31696	FAMILY NOT NAMED	coord: 1..211 score: 7.7
None	No IPR available	PANTHER	PTHR31696:SF2	SUBFAMILY NOT NAMED	coord: 1..211 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G006130	Csa5G577380	Cucumber (Chinese Long) v2	culsiB329
Lsi09G006130	CSPI05G20100	Wild cucumber (PI 183967)	cpilsiB329
Lsi09G006130	Cucsa.280820	Cucumber (Gy14) v1	cgylsiB452
Lsi09G006130	CmoCh04G021190	Cucurbita moschata (Rifu)	cmolsiB613
Lsi09G006130	Cla002314	Watermelon (97103) v1	lsiwmB030
Lsi09G006130	MELO3C005350	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G006130	ClCG01G005790	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G006130	MELO3C005350.2	Melon (DHL92) v3.6.1	lsimedB013
Lsi09G006130	MELO3C012203.2	Melon (DHL92) v3.6.1	lsimedB017
Lsi09G006130	Cla97C05G105050	Watermelon (97103) v2	lsiwmbB017
Lsi09G006130	Cla97C01G006060	Watermelon (97103) v2	lsiwmbB007
Lsi09G006130	Bhi07G001150	Wax gourd	lsiwgoB055
Lsi09G006130	Bhi12G000719	Wax gourd	lsiwgoB006
Lsi09G006130	CsGy5G019640	Cucumber (Gy14) v2	cgyblsiB301
Lsi09G006130	CsaV3_5G028900	Cucumber (Chinese Long) v3	cuclsiB352
Lsi09G006130	CsaV3_5G033850	Cucumber (Chinese Long) v3	cuclsiB357

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G006130	Cucurbita maxima (Rimu)	cmalsiB261
Lsi09G006130	Cucurbita moschata (Rifu)	cmolsiB248
Lsi09G006130	Cucurbita pepo (Zucchini)	cpelsiB133
Lsi09G006130	Silver-seed gourd	carlsiB676