Csa5G577380 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G577380
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Plant-specific domain TIGR01570 family protein; contains IPR006460 (Protein of unknown function DUF617, plant)
Location	Chr5 : 20333084 .. 20333842 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATCTTATTATTTTTTCTTTTTCTGAAGATGAAAACGATTATGGCCAATTCTTCTTCACATGATTCCTTCTCCTTCTCCAAGAGATATAATCATTATTTCAACTTCAACAAAAACACCAAACACAACCATAACCAACACCAAGATCAAGAAGATGACCACCACCAAATCCTAACCGTCAACCCTCCAAAACACAAGCACACCACTGCTGTCTCCGTCTCCAAGCTCCGTTCCGCCATTGCATTATCGTTCGGGATTAGGACTCGGTCGTGTCGAGTCCTGGGGACGATATTCGGTCATAGACGAGGGCACGTGCATTTCTCGGTACAAACAGAGGGGAGTGCGAAGCCGATGTTCTTAGTGGAGCTAGCGATGCCGACGACTGCGCTCGTTCGAGAAATGGCGTCGGGGGTGGCGAGGATTGCGTTGGAGTGCGAGAGAGGGGAGAAAAAGAAGAAGAAGGGAGAGTTGAACGAGGAAGGGATATGGAGAGCATATTGTAATGGGAAGAAGTATGGAGTTGCTCATAGGTTTGAGTGTGGGGCTGAAGAATGGAGGATTCTTAGAGCTGTTGGGCCTATAACTGTTGGAGCTGGGGTGTTGCCTGGGATTGAAGAGGGAGGTTGTGAAGGTGAAGTGATGTTCATGAGGGCTAGGTTTGAGAGAGTCGTGGGTTCGAAGGATTCAGAAGCTTTTTACATGATTAACCCTGATGGGGTTGGTGGCCCTGAGCTTAGTATTTTTTTGCTCAGGGTTTGA

mRNA sequence

ATGAAAACGATTATGGCCAATTCTTCTTCACATGATTCCTTCTCCTTCTCCAAGAGATATAATCATTATTTCAACTTCAACAAAAACACCAAACACAACCATAACCAACACCAAGATCAAGAAGATGACCACCACCAAATCCTAACCGTCAACCCTCCAAAACACAAGCACACCACTGCTGTCTCCGTCTCCAAGCTCCGTTCCGCCATTGCATTATCGTTCGGGATTAGGACTCGGTCGTGTCGAGTCCTGGGGACGATATTCGGTCATAGACGAGGGCACGTGCATTTCTCGGTACAAACAGAGGGGAGTGCGAAGCCGATGTTCTTAGTGGAGCTAGCGATGCCGACGACTGCGCTCGTTCGAGAAATGGCGTCGGGGGTGGCGAGGATTGCGTTGGAGTGCGAGAGAGGGGAGAAAAAGAAGAAGAAGGGAGAGTTGAACGAGGAAGGGATATGGAGAGCATATTGTAATGGGAAGAAGTATGGAGTTGCTCATAGGTTTGAGTGTGGGGCTGAAGAATGGAGGATTCTTAGAGCTGTTGGGCCTATAACTGTTGGAGCTGGGGTGTTGCCTGGGATTGAAGAGGGAGGTTGTGAAGGTGAAGTGATGTTCATGAGGGCTAGGTTTGAGAGAGTCGTGGGTTCGAAGGATTCAGAAGCTTTTTACATGATTAACCCTGATGGGGTTGGTGGCCCTGAGCTTAGTATTTTTTTGCTCAGGGTTTGA

Coding sequence (CDS)

ATGAAAACGATTATGGCCAATTCTTCTTCACATGATTCCTTCTCCTTCTCCAAGAGATATAATCATTATTTCAACTTCAACAAAAACACCAAACACAACCATAACCAACACCAAGATCAAGAAGATGACCACCACCAAATCCTAACCGTCAACCCTCCAAAACACAAGCACACCACTGCTGTCTCCGTCTCCAAGCTCCGTTCCGCCATTGCATTATCGTTCGGGATTAGGACTCGGTCGTGTCGAGTCCTGGGGACGATATTCGGTCATAGACGAGGGCACGTGCATTTCTCGGTACAAACAGAGGGGAGTGCGAAGCCGATGTTCTTAGTGGAGCTAGCGATGCCGACGACTGCGCTCGTTCGAGAAATGGCGTCGGGGGTGGCGAGGATTGCGTTGGAGTGCGAGAGAGGGGAGAAAAAGAAGAAGAAGGGAGAGTTGAACGAGGAAGGGATATGGAGAGCATATTGTAATGGGAAGAAGTATGGAGTTGCTCATAGGTTTGAGTGTGGGGCTGAAGAATGGAGGATTCTTAGAGCTGTTGGGCCTATAACTGTTGGAGCTGGGGTGTTGCCTGGGATTGAAGAGGGAGGTTGTGAAGGTGAAGTGATGTTCATGAGGGCTAGGTTTGAGAGAGTCGTGGGTTCGAAGGATTCAGAAGCTTTTTACATGATTAACCCTGATGGGGTTGGTGGCCCTGAGCTTAGTATTTTTTTGCTCAGGGTTTGA

Protein sequence

MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTAVSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLLRV*

Homology

[Close]

BLAST of Csa5G577380 vs. Swiss-Prot
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-42
Identity = 90/172 (52.33%), Postives = 116/172 (67.44%), Query Frame = 1


Query: 82  RVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKK 141
           RV GT++GH+RGHV FSVQ    + P+ L++LAM T  LV+EM+SG+ RIALECE+  + 
Sbjct: 128 RVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRS 187

Query: 142 KKKGELNEEGIWRAYCNGKK--YGVAHRFECGAEEWRILRAVGPITVGAGVLP------- 201
             K  L +E  W  YCNG+K  Y V+    C   +WR+L  V  +TVGAGV+P       
Sbjct: 188 GTK--LFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDD 247

Query: 202 --GIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLLRV 243
             G+  G   GE+++MR +FERVVGS+DSEAFYM+NPD  GGPELSIFLLR+
Sbjct: 248 VSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLRI 297

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BLAST of Csa5G577380 vs. TrEMBL
Match: A0A0A0KT21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577380 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 4.8e-138
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA 60
           MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA
Sbjct: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA 60

Query: 61  VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL 120
           VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL
Sbjct: 61  VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL 120

Query: 121 VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA 180
           VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA
Sbjct: 121 VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA 180

Query: 181 VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL 240
           VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL
Sbjct: 181 VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL 240

Query: 241 RV 243
           RV
Sbjct: 241 RV 242

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BLAST of Csa5G577380 vs. TrEMBL
Match: A0A068TWB9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032530001 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.2e-65
Identity = 146/269 (54.28%), Postives = 185/269 (68.77%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQ------------------DQED 60
           MKTIMA +  H+SFSFS+RY   FNF K  +   ++ +                  DQ+ 
Sbjct: 1   MKTIMAKNP-HESFSFSRRY---FNFRKKVEDEDDEEEIFAFSSSSLGCEEELKGIDQDI 60

Query: 61  D-HHQILTVNPPKHKHTTAVSVSKLRSAIALSFGIRTRS------CRVLGTIFGHRRGHV 120
                 L V PPK K  T+++VSKLR+A A  FG + RS       +V+GT+FG+RRGHV
Sbjct: 61  SLSMHTLPVKPPKKK-LTSLAVSKLRAAFA--FGNKNRSRFSGLGTKVVGTLFGYRRGHV 120

Query: 121 HFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKGE-LNEEGIWR 180
           HF+ Q +    P FLVELA PT+ L++EMASG+ RIALEC+R   +KK  + L EE IWR
Sbjct: 121 HFAFQEDPKLSPAFLVELATPTSVLIKEMASGLVRIALECDRKTTEKKNVKPLLEEQIWR 180

Query: 181 AYCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEG-GCEGEVMFMRARFERV 240
            YCNG+K G A R ECGAEEW++L ++GPI++GAGVLPG  +G G EGE+M+MRA+FERV
Sbjct: 181 TYCNGRKCGYATRRECGAEEWKVLNSIGPISMGAGVLPGAGKGDGSEGELMYMRAKFERV 240

Query: 241 VGSKDSEAFYMINPDGVGGPELSIFLLRV 243
           VGSKDSEAFYM+NPDG GGPELSI+LLRV
Sbjct: 241 VGSKDSEAFYMMNPDGHGGPELSIYLLRV 262

[Close]

BLAST of Csa5G577380 vs. TrEMBL
Match: M5Y7V4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017045mg PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.2e-65
Identity = 140/268 (52.24%), Postives = 186/268 (69.40%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFN------------FNKNTKHNHNQHQDQEDDHHQIL 60
           M+TIMA +S   SFSFS+RY H+               N N+ ++H   + ++D+    +
Sbjct: 1   MRTIMAKTSHDSSFSFSRRYFHWKKKVEDDEDDYHEILNFNSSYSHFSEESEKDEQELRI 60

Query: 61  TVNP---------PKHKHTTAVSVSKLRSAIALSFGIRTRS---CRVLGTIFGHRRGHVH 120
            V+          P+ KH+  +SVSK+RSA+ +    R+RS    RV+GT+FG+RRGHVH
Sbjct: 61  PVSTDTALIPAIIPRKKHSL-MSVSKIRSALTVFGKRRSRSGLGTRVMGTLFGYRRGHVH 120

Query: 121 FSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKG-ELNEEGIWRA 180
            + Q E    P FL+ELA PT+ LVREMASG+ RIALECE+  K +KKG ++ EE +WR 
Sbjct: 121 LAFQEEPKLSPAFLIELATPTSVLVREMASGLVRIALECEK--KTEKKGLKMLEEPLWRT 180

Query: 181 YCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEG-GCEGEVMFMRARFERVV 240
           YCNGKK G A + +CG  EW++L+A+ PI++GAGVLPG E+G G EGE+M+MRA+FERVV
Sbjct: 181 YCNGKKCGFAMKRDCGPGEWKVLKALEPISMGAGVLPGSEDGVGAEGELMYMRAKFERVV 240

Query: 241 GSKDSEAFYMINPDGVGGPELSIFLLRV 243
           GSKDSEAFYM+NPDG GGPELSI+LLRV
Sbjct: 241 GSKDSEAFYMMNPDGSGGPELSIYLLRV 265

[Close]

BLAST of Csa5G577380 vs. TrEMBL
Match: A0A0L9UUM3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g159300 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 144/264 (54.55%), Postives = 182/264 (68.94%), Query Frame = 1


Query: 1   MKTIMANSSSHDS-FSFSKRYNHYFN--------------FNKNTKHNHNQHQDQEDDHH 60
           MKTIMA    HDS FSFS+RY H+                 N +T  +H   + Q+D +H
Sbjct: 1   MKTIMAAKFPHDSSFSFSRRYFHWKKKALDEEDDDNEEEILNFSTSSSHFLDEKQQDYNH 60

Query: 61  ------QILTVNPPKHKHTTAVSVSKLRSAIALSFGIRTR-SCRVLGTIFGHRRGHVHFS 120
                 Q  TV     +H    ++SKL+SA+ + F  RT+   RV+GT+FGHRRGHVHF+
Sbjct: 61  PLQMSSQHATVTT---EHKKKPNLSKLKSALTV-FTKRTQLGTRVVGTLFGHRRGHVHFA 120

Query: 121 VQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKGELNEEGIWRAYCN 180
           +Q +  A P FL++LA PT+ LVREMASG+ RIALECE+ +K +K   L EEG+WR YCN
Sbjct: 121 IQEDPKAGPAFLIQLATPTSVLVREMASGLVRIALECEK-KKSEKSNRLLEEGVWRTYCN 180

Query: 181 GKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKD 240
           G+K G A R ECG EEW+IL+AV PI++GAGVLP   EG  EGEVM+MRAR+ERVVGS+D
Sbjct: 181 GRKCGYASRRECGPEEWKILKAVEPISMGAGVLP--LEGCEEGEVMYMRARYERVVGSRD 240

Query: 241 SEAFYMINPDGVGGPELSIFLLRV 243
           SEAFYM+NPDGVGGPELSI+ +RV
Sbjct: 241 SEAFYMMNPDGVGGPELSIYFIRV 257

[Close]

BLAST of Csa5G577380 vs. TrEMBL
Match: A0A0S3T1I7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G025700 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 144/264 (54.55%), Postives = 182/264 (68.94%), Query Frame = 1


Query: 1   MKTIMANSSSHDS-FSFSKRYNHYFN--------------FNKNTKHNHNQHQDQEDDHH 60
           MKTIMA    HDS FSFS+RY H+                 N +T  +H   + Q+D +H
Sbjct: 1   MKTIMAAKFPHDSSFSFSRRYFHWKKKALDEEDDDNEEEILNFSTSSSHFLDEKQQDYNH 60

Query: 61  ------QILTVNPPKHKHTTAVSVSKLRSAIALSFGIRTR-SCRVLGTIFGHRRGHVHFS 120
                 Q  TV     +H    ++SKL+SA+ + F  RT+   RV+GT+FGHRRGHVHF+
Sbjct: 61  PLQMSSQHATVTT---EHKKKPNLSKLKSALTV-FTKRTQLGTRVVGTLFGHRRGHVHFA 120

Query: 121 VQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKGELNEEGIWRAYCN 180
           +Q +  A P FL++LA PT+ LVREMASG+ RIALECE+ +K +K   L EEG+WR YCN
Sbjct: 121 IQEDPKAGPAFLIQLATPTSVLVREMASGLVRIALECEK-KKSEKSNRLLEEGVWRTYCN 180

Query: 181 GKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKD 240
           G+K G A R ECG EEW+IL+AV PI++GAGVLP   EG  EGEVM+MRAR+ERVVGS+D
Sbjct: 181 GRKCGYASRRECGPEEWKILKAVEPISMGAGVLP--LEGCEEGEVMYMRARYERVVGSRD 240

Query: 241 SEAFYMINPDGVGGPELSIFLLRV 243
           SEAFYM+NPDGVGGPELSI+ +RV
Sbjct: 241 SEAFYMMNPDGVGGPELSIYFIRV 257

[Close]

BLAST of Csa5G577380 vs. TAIR10
Match: AT3G25640.1 (AT3G25640.1 Protein of unknown function, DUF617)

HSP 1 Score: 215.7 bits (548), Expect = 3.2e-56
Identity = 131/271 (48.34%), Postives = 170/271 (62.73%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNT--KHNHNQHQDQEDDHH----QILT----- 60
           MK+I+AN+S   SFS SKRY   FN+ K    + +  + +++EDD++    ++LT     
Sbjct: 1   MKSILANTSLDSSFSLSKRY---FNWKKKKVQEDDDEEEEEEEDDYNHNEKKVLTRFNFS 60

Query: 61  VNPPKHKHTTAVSVSKLRSA-------IALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTE 120
            +P +     A  + K +          AL F       RV+GT+FG+RRGHV+F+VQ +
Sbjct: 61  SDPTRPDQFNAQQIMKKKKKKTLEKIRYALGFSNSGLGFRVVGTLFGNRRGHVYFAVQDD 120

Query: 121 GSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKY 180
            +  P  L++L  PT+ LVREMASG+ RIALE    +   KK +L EE  WR YCNGKK 
Sbjct: 121 PTRLPAVLIQLPTPTSVLVREMASGLVRIALETAAYKTDSKK-KLLEESTWRTYCNGKKC 180

Query: 181 GVAHRFECGAEEWRILRAVGPITVGAGVLPGI-----EEG----GCE-GEVMFMRARFER 240
           G A R ECG  EW++L+AVGPIT+GAGVLP       EEG    G E GE+M+MRARFER
Sbjct: 181 GYAARKECGEAEWKVLKAVGPITMGAGVLPATTTTVDEEGNGAVGSEKGELMYMRARFER 240

Query: 241 VVGSKDSEAFYMINPD-GVGGPELSIFLLRV 243
           VVGS+DSEAFYM+NPD   GGPELS++ LRV
Sbjct: 241 VVGSRDSEAFYMMNPDVSSGGPELSVYFLRV 267

[Close]

BLAST of Csa5G577380 vs. TAIR10
Match: AT5G23100.1 (AT5G23100.1 Protein of unknown function, DUF617)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51
Identity = 115/273 (42.12%), Postives = 161/273 (58.97%), Query Frame = 1


Query: 8   SSSHDSFSFSKRY----NHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTAVSV 67
           S  H+SF ++++     N   + +K   H++N              +   K   + AVS 
Sbjct: 7   SKRHNSFHWTRKVGSDENDDVSSHKPLPHHNNTKPSSSSSSSSSNVITHKKKLQSFAVS- 66

Query: 68  SKLRSAIALSFGIRTRS------CRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPT 127
            +LRS IA     R  +       RV+GT+FG RRGHVHFS+Q + ++ P FL+ELA P 
Sbjct: 67  -RLRSVIATLSRARPGNQNSGLGSRVVGTLFGSRRGHVHFSIQKDPNSPPAFLIELATPI 126

Query: 128 TALVREMASGVARIALECERGEKKKKKGELN------------------------EEGIW 187
           + LV+EMASG+ RIALEC++G+++++  E N                        EE +W
Sbjct: 127 SGLVKEMASGLVRIALECDKGKEEEEGEEKNGTLRHGGGDKTKTTTTAAVSRRLVEEPMW 186

Query: 188 RAYCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEE----GGCEGEVMFMRAR 243
           R YCNGKK G A R ECG +E ++L+A+  +++GAGVLP  EE    GG  G++M+MRA+
Sbjct: 187 RTYCNGKKCGFATRRECGEKEKKVLKALEMVSMGAGVLPETEEIGGGGGGGGDIMYMRAK 246

[Close]

BLAST of Csa5G577380 vs. TAIR10
Match: AT2G41660.1 (AT2G41660.1 Protein of unknown function, DUF617)

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 90/172 (52.33%), Postives = 116/172 (67.44%), Query Frame = 1


Query: 82  RVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKK 141
           RV GT++GH+RGHV FSVQ    + P+ L++LAM T  LV+EM+SG+ RIALECE+  + 
Sbjct: 128 RVTGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRS 187

Query: 142 KKKGELNEEGIWRAYCNGKK--YGVAHRFECGAEEWRILRAVGPITVGAGVLP------- 201
             K  L +E  W  YCNG+K  Y V+    C   +WR+L  V  +TVGAGV+P       
Sbjct: 188 GTK--LFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDD 247

Query: 202 --GIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLLRV 243
             G+  G   GE+++MR +FERVVGS+DSEAFYM+NPD  GGPELSIFLLR+
Sbjct: 248 VSGVGSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLRI 297

[Close]

BLAST of Csa5G577380 vs. TAIR10
Match: AT4G39610.1 (AT4G39610.1 Protein of unknown function, DUF617)

HSP 1 Score: 156.0 bits (393), Expect = 3.0e-38
Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 1


Query: 82  RVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECER---- 141
           R+ GT+FG+R+G V  S+Q      P  +VELAM TT L +E+++G+ RIALE E+    
Sbjct: 96  RITGTLFGYRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRA 155

Query: 142 ---GEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGI 201
                K +KK ++ EE +W  YC G+K G   + E   E+  ++  + P+++GAGVLPG 
Sbjct: 156 DNNNSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMGAGVLPGN 215

Query: 202 EEG-GCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLLRV 243
            E  G +GE+ +MRA FERV+GSKDSE FYM++P+G  GPELS F +RV
Sbjct: 216 SESEGPDGEMAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVRV 264

[Close]

BLAST of Csa5G577380 vs. TAIR10
Match: AT2G21990.1 (AT2G21990.1 Protein of unknown function, DUF617)

HSP 1 Score: 149.1 bits (375), Expect = 3.6e-36
Identity = 79/163 (48.47%), Postives = 108/163 (66.26%), Query Frame = 1


Query: 82  RVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECE-RGEK 141
           RV GT+FG+R+G V  S+Q      P  +VELAM T  L +E++ G+ RIALE E RG+K
Sbjct: 92  RVTGTLFGYRKGRVSLSIQESPRCLPSLVVELAMQTMVLQKELSGGMVRIALETEKRGDK 151

Query: 142 KKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEE-GGC 201
           +K K  + +E +W  + NGKK G   + +   E+  ++  + P+++GAGVLPG  E  G 
Sbjct: 152 EKIK--IMDEPLWTMFSNGKKTGYGVKRDATEEDLNVMELLRPVSMGAGVLPGNTEFEGP 211

Query: 202 EGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLLRV 243
           + E+ +MRA FERVVGSKDSE FYM++P+G  GPELSIF +RV
Sbjct: 212 DSEMAYMRAYFERVVGSKDSETFYMLSPEGNNGPELSIFFVRV 252

[Close]

BLAST of Csa5G577380 vs. NCBI nr
Match: gi|778704175|ref|XP_004147139.2| (PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis sativus])

HSP 1 Score: 498.4 bits (1282), Expect = 6.9e-138
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA 60
           MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA
Sbjct: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA 60

Query: 61  VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL 120
           VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL
Sbjct: 61  VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL 120

Query: 121 VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA 180
           VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA
Sbjct: 121 VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA 180

Query: 181 VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL 240
           VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL
Sbjct: 181 VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL 240

Query: 241 RV 243
           RV
Sbjct: 241 RV 242

[Close]

BLAST of Csa5G577380 vs. NCBI nr
Match: gi|659072984|ref|XP_008467200.1| (PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 6.1e-134
Identity = 235/242 (97.11%), Postives = 240/242 (99.17%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQDQEDDHHQILTVNPPKHKHTTA 60
           MKTIMANSSSHDSFSFSKRYN+YFNFNKNTKHNHNQHQ++EDDHHQILTVNPPKHKHTT 
Sbjct: 1   MKTIMANSSSHDSFSFSKRYNNYFNFNKNTKHNHNQHQEEEDDHHQILTVNPPKHKHTTV 60

Query: 61  VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL 120
           VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL
Sbjct: 61  VSVSKLRSAIALSFGIRTRSCRVLGTIFGHRRGHVHFSVQTEGSAKPMFLVELAMPTTAL 120

Query: 121 VREMASGVARIALECERGEKKKKKGELNEEGIWRAYCNGKKYGVAHRFECGAEEWRILRA 180
           VREMASGVARIALECERGEKKKKKGELNEEGIWR+YCNGKKYG+AHRFECGAEEWRILRA
Sbjct: 121 VREMASGVARIALECERGEKKKKKGELNEEGIWRSYCNGKKYGIAHRFECGAEEWRILRA 180

Query: 181 VGPITVGAGVLPGIEEGGCEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL 240
           VGPITVGAGVLPGIEEGG EGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL
Sbjct: 181 VGPITVGAGVLPGIEEGGGEGEVMFMRARFERVVGSKDSEAFYMINPDGVGGPELSIFLL 240

Query: 241 RV 243
           RV
Sbjct: 241 RV 242

[Close]

BLAST of Csa5G577380 vs. NCBI nr
Match: gi|661895978|emb|CDP00556.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 256.5 bits (654), Expect = 4.6e-65
Identity = 146/269 (54.28%), Postives = 185/269 (68.77%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFNFNKNTKHNHNQHQ------------------DQED 60
           MKTIMA +  H+SFSFS+RY   FNF K  +   ++ +                  DQ+ 
Sbjct: 1   MKTIMAKNP-HESFSFSRRY---FNFRKKVEDEDDEEEIFAFSSSSLGCEEELKGIDQDI 60

Query: 61  D-HHQILTVNPPKHKHTTAVSVSKLRSAIALSFGIRTRS------CRVLGTIFGHRRGHV 120
                 L V PPK K  T+++VSKLR+A A  FG + RS       +V+GT+FG+RRGHV
Sbjct: 61  SLSMHTLPVKPPKKK-LTSLAVSKLRAAFA--FGNKNRSRFSGLGTKVVGTLFGYRRGHV 120

Query: 121 HFSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKGE-LNEEGIWR 180
           HF+ Q +    P FLVELA PT+ L++EMASG+ RIALEC+R   +KK  + L EE IWR
Sbjct: 121 HFAFQEDPKLSPAFLVELATPTSVLIKEMASGLVRIALECDRKTTEKKNVKPLLEEQIWR 180

Query: 181 AYCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEG-GCEGEVMFMRARFERV 240
            YCNG+K G A R ECGAEEW++L ++GPI++GAGVLPG  +G G EGE+M+MRA+FERV
Sbjct: 181 TYCNGRKCGYATRRECGAEEWKVLNSIGPISMGAGVLPGAGKGDGSEGELMYMRAKFERV 240

Query: 241 VGSKDSEAFYMINPDGVGGPELSIFLLRV 243
           VGSKDSEAFYM+NPDG GGPELSI+LLRV
Sbjct: 241 VGSKDSEAFYMMNPDGHGGPELSIYLLRV 262

[Close]

BLAST of Csa5G577380 vs. NCBI nr
Match: gi|596294616|ref|XP_007226866.1| (hypothetical protein PRUPE_ppa017045mg [Prunus persica])

HSP 1 Score: 256.1 bits (653), Expect = 6.0e-65
Identity = 140/268 (52.24%), Postives = 186/268 (69.40%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFN------------FNKNTKHNHNQHQDQEDDHHQIL 60
           M+TIMA +S   SFSFS+RY H+               N N+ ++H   + ++D+    +
Sbjct: 1   MRTIMAKTSHDSSFSFSRRYFHWKKKVEDDEDDYHEILNFNSSYSHFSEESEKDEQELRI 60

Query: 61  TVNP---------PKHKHTTAVSVSKLRSAIALSFGIRTRS---CRVLGTIFGHRRGHVH 120
            V+          P+ KH+  +SVSK+RSA+ +    R+RS    RV+GT+FG+RRGHVH
Sbjct: 61  PVSTDTALIPAIIPRKKHSL-MSVSKIRSALTVFGKRRSRSGLGTRVMGTLFGYRRGHVH 120

Query: 121 FSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKG-ELNEEGIWRA 180
            + Q E    P FL+ELA PT+ LVREMASG+ RIALECE+  K +KKG ++ EE +WR 
Sbjct: 121 LAFQEEPKLSPAFLIELATPTSVLVREMASGLVRIALECEK--KTEKKGLKMLEEPLWRT 180

Query: 181 YCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEG-GCEGEVMFMRARFERVV 240
           YCNGKK G A + +CG  EW++L+A+ PI++GAGVLPG E+G G EGE+M+MRA+FERVV
Sbjct: 181 YCNGKKCGFAMKRDCGPGEWKVLKALEPISMGAGVLPGSEDGVGAEGELMYMRAKFERVV 240

Query: 241 GSKDSEAFYMINPDGVGGPELSIFLLRV 243
           GSKDSEAFYM+NPDG GGPELSI+LLRV
Sbjct: 241 GSKDSEAFYMMNPDGSGGPELSIYLLRV 265

[Close]

BLAST of Csa5G577380 vs. NCBI nr
Match: gi|645276146|ref|XP_008243149.1| (PREDICTED: protein MIZU-KUSSEI 1 [Prunus mume])

HSP 1 Score: 254.2 bits (648), Expect = 2.3e-64
Identity = 140/268 (52.24%), Postives = 184/268 (68.66%), Query Frame = 1


Query: 1   MKTIMANSSSHDSFSFSKRYNHYFN------------FNKNTKHNHNQHQDQEDDHHQIL 60
           M+TIMA +    SFSFS+RY H+               N N+ ++H   + ++D+    +
Sbjct: 1   MRTIMAKTPHDSSFSFSRRYFHWKKKVEDDEEDDHEILNFNSSYSHFSEESEKDEQELRI 60

Query: 61  TVNP---------PKHKHTTAVSVSKLRSAIALSFGIRTRS---CRVLGTIFGHRRGHVH 120
            V           P+ KH+  +SVSKLRSA+ +    R+RS    RV+GT+FG+RRGHVH
Sbjct: 61  PVPTDTALIPAIIPRKKHSL-MSVSKLRSALTVFGKSRSRSGLGTRVMGTLFGYRRGHVH 120

Query: 121 FSVQTEGSAKPMFLVELAMPTTALVREMASGVARIALECERGEKKKKKG-ELNEEGIWRA 180
            + Q E    P FL+ELA PT+ LVREMASG+ RIALECE+  K +KKG ++ EE +WR 
Sbjct: 121 LAFQEEPKLSPAFLIELATPTSVLVREMASGLVRIALECEK--KTEKKGLKMLEEPLWRT 180

Query: 181 YCNGKKYGVAHRFECGAEEWRILRAVGPITVGAGVLPGIEEG-GCEGEVMFMRARFERVV 240
           YCNGKK G A + +CG  EW++L+A+ PI++GAGVLPG E+G G EGE+M+MRA+FERVV
Sbjct: 181 YCNGKKCGFAMKRDCGPGEWKVLKALEPISMGAGVLPGSEDGVGAEGELMYMRAKFERVV 240

Query: 241 GSKDSEAFYMINPDGVGGPELSIFLLRV 243
           GSKDSEAFYM+NPDG GGPELSI+LLRV
Sbjct: 241 GSKDSEAFYMMNPDGSGGPELSIYLLRV 265

The following BLAST results are available for this feature:

BLAST of Csa5G577380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MIZ1_ARATH	4.2e-42	52.33	Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1	[more]

BLAST of Csa5G577380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT21_CUCSA	4.8e-138	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577380 PE=4 SV=1	[more]
A0A068TWB9_COFCA	3.2e-65	54.28	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032530001 PE=4 SV=1	[more]
M5Y7V4_PRUPE	4.2e-65	52.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017045mg PE=4 SV=1	[more]
A0A0L9UUM3_PHAAN	1.6e-64	54.55	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g159300 PE=4 SV=1	[more]
A0A0S3T1I7_PHAAN	1.6e-64	54.55	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G025700 PE=...	[more]

BLAST of Csa5G577380 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25640.1	3.2e-56	48.34	Protein of unknown function, DUF617	[more]
AT5G23100.1	1.4e-51	42.12	Protein of unknown function, DUF617	[more]
AT2G41660.1	2.3e-43	52.33	Protein of unknown function, DUF617	[more]
AT4G39610.1	3.0e-38	46.15	Protein of unknown function, DUF617	[more]
AT2G21990.1	3.6e-36	48.47	Protein of unknown function, DUF617	[more]

BLAST of Csa5G577380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778704175\|ref\|XP_004147139.2\|	6.9e-138	100.00	PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis sativus]	[more]
gi\|659072984\|ref\|XP_008467200.1\|	6.1e-134	97.11	PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis melo]	[more]
gi\|661895978\|emb\|CDP00556.1\|	4.6e-65	54.28	unnamed protein product [Coffea canephora]	[more]
gi\|596294616\|ref\|XP_007226866.1\|	6.0e-65	52.24	hypothetical protein PRUPE_ppa017045mg [Prunus persica]	[more]
gi\|645276146\|ref\|XP_008243149.1\|	2.3e-64	52.24	PREDICTED: protein MIZU-KUSSEI 1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006460	MIZ1-like_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G577380.1	Csa5G577380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006460	Protein of unknown function DUF617, plant	PFAM	PF04759	DUF617	coord: 83..241 score: 1.5
IPR006460	Protein of unknown function DUF617, plant	TIGRFAMs	TIGR01570	TIGR01570	coord: 83..242 score: 2.7
None	No IPR available	PANTHER	PTHR31696	FAMILY NOT NAMED	coord: 1..242 score: 5.2E
None	No IPR available	PANTHER	PTHR31696:SF2	SUBFAMILY NOT NAMED	coord: 1..242 score: 5.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G577380	Cla002314	Watermelon (97103) v1	cuwmB418
Csa5G577380	Cla020354	Watermelon (97103) v1	cuwmB405
Csa5G577380	MELO3C005350	Melon (DHL92) v3.5.1	cumeB346
Csa5G577380	MELO3C012203	Melon (DHL92) v3.5.1	cumeB384
Csa5G577380	ClCG05G023150	Watermelon (Charleston Gray)	cuwcgB397
Csa5G577380	ClCG01G005790	Watermelon (Charleston Gray)	cuwcgB372
Csa5G577380	Lsi04G003010	Bottle gourd (USVL1VR-Ls)	culsiB373
Csa5G577380	Lsi09G006130	Bottle gourd (USVL1VR-Ls)	culsiB329
Csa5G577380	MELO3C012203.2	Melon (DHL92) v3.6.1	cumedB367
Csa5G577380	MELO3C005350.2	Melon (DHL92) v3.6.1	cumedB329
Csa5G577380	Cla97C01G006060	Watermelon (97103) v2	cuwmbB344
Csa5G577380	Cla97C05G105050	Watermelon (97103) v2	cuwmbB387
Csa5G577380	Bhi07G001150	Wax gourd	cuwgoB521
Csa5G577380	Bhi12G000719	Wax gourd	cuwgoB450
Csa5G577380	CSPI05G20100	Wild cucumber (PI 183967)	cpicuB239
Csa5G577380	CSPI05G24830	Wild cucumber (PI 183967)	cpicuB249
Csa5G577380	Cucsa.280820	Cucumber (Gy14) v1	cgycuB398
Csa5G577380	Cucsa.284030	Cucumber (Gy14) v1	cgycuB412
Csa5G577380	Cp4.1LG09g02570	Cucurbita pepo (Zucchini)	cpecuB045
Csa5G577380	CsGy5G019640	Cucumber (Gy14) v2	cgybcuB223
Csa5G577380	Carg01804	Silver-seed gourd	carcuB0859

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa5G577380	Csa5G608220	Cucumber (Chinese Long) v2	cucuB158

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G577380	Cucurbita moschata (Rifu)	cmocuB729
Csa5G577380	Cucurbita pepo (Zucchini)	cpecuB184
Csa5G577380	Silver-seed gourd	carcuB0863
Csa5G577380	Cucurbita maxima (Rimu)	cmacuB737