Lsi09G004570 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGTTGAAGGGGACAAAGTTGGTGATCAAATCATAGAAATTTAGGGCATTTTTTCCCCATAATTGATTGATTGTGTTCTTGAAACCCCAGATTTCGTTCAGCCTTTTCAATTCTTACTTTTGATTTCATTTTCATTTCTCTCATAAAGTTGAAGCGATCGGGATCGCTAAATTCTTTTTTCGATATCTTTCAGCTCATCCTCTTTGTCTCTCGGATTCGATCAATTCTCCTCAAGTCCTGTTCAATTCGCCCCATTTCGATGTTTTTGGGGTTTACTCTTTGAATGTTAGGTCAATTTTCAAATCCCCTCTTTGTTTGTGCAAATTCTGGATTTGCAGCTTCGTCTCTTCGCGTTTTTTCTTCCGAAGATTGGGATCTTTCCGTTCTTTATCTCAACTTTCTCGGCAGACAAACTGACGCTCAAGGTTTTTTTTTTCCCCTTGAAAATTCGCTGCAGTTCTCAGGTTTTTAGTTTTTGTGATTATCATTCATAGAAACCAAGTAATTCTGTAGCTACTTCTCTTTTGAATTTTCAGGTTTCTTGAAGGGTCTTTTGCGAAGATGATTAGTCTGTAATCTTTGGCGTTTTTTTTTCGAACCGGGCTAGTTATTAGACACAATGCGTCTGTTTCCAGTGAGATCTAGCCCGGATTTTACCGAGGACAAGGAACAGAGCGGCAGTCATGCTTTGCTATATCTTAATGTCTATGATCTTACTCCTATAAATAACTATCTTTATTGGTTTGGACTTGGAATCTTTCATTCGGGTATTGAGGGTATGTAAATTATATACTTCTTTACAATAGAGCTGTTGTTGTGTTCCTCATTGTAGATTCATTTTTTTATTATTATTGTTATTATTTACTGGGAAGTTCTGTTTGCAATGGTGGCAAATTGGTTAGCCTGAGATAAATATATGAAGCATGGATAACTTTTGTTTTTTGGATATGAGATGCATGAATAACTAAATGGTATATTTTAGTTGTTTTGGATTGGGAGGGAGCTGGAATTAGTTGAACTTGGAGAGTTATTAGGGGCATATCTTTGAGCTCACCCATTATTTGAGGTATTACTAGTTTGCAATCTTAAATCTATGTTTTTCTGACTTGACTGATGGGATATAGGAGCATTCAGCGTATGATCTATCGAACCTTCATGGGGCTATTGGCACTTATCTGTGAGAAATATTTAGTTTTTTCCTGAAATATATTAATGAATGGACAGAGGAAAGTGTTTGTTAAGTTAATTAGGAATATGAAAGTTGTGGATGAGATATGCCACGGGACTGTCAGAAATGTAAGTGAGCATGACATTGTTTGACAGTGGTTCTGTAGGAAATCAATTTTTCTTAAGCTTCATGTGTAACAGATTCTGCCATGGTTCTGTTGAGGATTTGTTCGTGCTAGTGAATTGTTCCTTATATTGATGTTTATATCAAATTGATCATTTCATGCTTGCTCATTGTGTCAGTTGTGACATGACGAATACAACTAGAAGCCATTTGAGTAACTACACATTTGTCAAGTTTTGTTCATTGTATAATAATTAGAAGATGAATCAATAAGGGGAGAAAAAAATGGAGAACCTGTTTGAGTTGTTCCTATCACGATTGACTGTAGAAAAACTAGTCAGCTGGTGTTATCTTTCCATTCAATAGGATAAATGATTAGTTCATCATATTTCTATTAAAAAGATACGACAGGCTTTGTGTATGTGGGGCACAAAATTCTTTTGTCACATTTAGGTCATGATCACCAAAAGCCTCATAGTAACATAATTGTCGATGTATGCTTCTGTTTGAAAATTCATTTCCAATCTTGATTGGTTGTTCTGTTTGCATTTTATCCTGGCATAAAATTGTTTTTGCTTGATTTGATACTCAGTTCATGGTATGGAGTATGGCTTTGGAGCACATGAATATCCTACAAGCGGGGTGTTTGAGGTAGAGCCAAAAAGTTGCCCTGGATTTATTTTCAGAAGGTCAGTGTTATTGGGAAGCACTGATTTGTCTCGTGCAGAATTTCGATCATTCATGGAGCACCTTTCTTCAGAGTATCACGGAGACACATATCATTTGATTGCCAAAAATTGCAACCATTTTACAGAAGAAGTCAGCATGCGACTAACTGGGAAGCCCATTCCTGGATGGGTGAATAGACTTGCCCGATTAGGTAAGAAATCTTTTCTTCTACAGCATGCAATTTTTGTCACGCTATAAGCCTTAAGATGTTAATTGGATAACAGTGTGTATTGCAGTATACCTTCAGAATCTCCTTAAATGTTACTCCTAGATATTATAACGAAGTTTTATATTTTCTTAAGCCACCTCATTCTGTAAAGCTAGATTTAAATGTTTTTTGTCTTTAAAGTTTTCACTAAACTTTCATTTCTGATCTTTACATCTTTCACTGCTCTAAGGTCCTTCATTTCATTGACATTTACCATACTGTTACCTCTCTGGAAATGTTTAAAATTTTGGGTTGAATAAGAGATGTATGACGAGTCAATATAAAATTACCTTTTTTATGGTGTGAACTTCGATAAAACGCGTAAAATGAATAATTTCTAGATTTGTTCTGTATTTGGCTCAACCCTGTGCAATTTTAGGATTCACTTTTGTTTGGTTCCCATCTTAGAATGACATTGTCATCTACGTGACAACACCTATAGGCTAATAGATACTGATTAGTGATGAAAGGGGAAAATAGCTCTTTTACCCGATCTGATTTTAACACTAACGTCGATCCCTCTAGAAGTCTTTGTGATCCATTAGCTTCTTGTGTAGAAAGGCGTTTTGCAGAGCACCAACTACTATATATTCTTGTATTTTGCTGAGAGTTCTTTATGCTTGAATAATTCTTTCACCTGATCATACTGTTGTTTGGGACTTCAGGTTCATTCTGCAATTGTCTTCTTCCAGAAAGCATTCAGATTTCAGCAGTGAGACACCTTCCTGATCATCCAGCATATTCTGGTGTGTTTTTCAATATTTTCTCAAGGGTGAATTATTTTTGCATTATTCACTTCAGGAGTGATATTCTTTTTTGGTTTTTCAATGACTTAATGAAACAATCTATCATGACGAAGCATCTGTTTGTAATTAACTCACCGTAGTTTTACTCGAATTTACATGTGAAATGAACAAATTGGTGATGGAAATGGGGGTATTAATAAACATTAAACATGCTCTGTATTGCCCTTAAGGTTTACGTTCGTTCTTGTCGTCCTGTTTAATTATTCTCTTTGATCTGGCATGTCATAATTCAGATGACGATGATGGGTCGGAATCTCTTGCATCTTCTACATCAGCAAGGAGCGAAGCGGAGGAATCGGATCATCATTTACTGATGAGTCCCAATGGCGATGTAGCATTTTTAAAAGAGAAACCGGTGAAACTAGCTAGAGAACCTGTTTAATTCATTTGCTCATTGGTTCCAACTTCTTTGCCTTAATCAATTTATTGTTTGTATTTGTGAAATGTAGTATTGAATGTATCATTTGATCAGGCCAAACTACTTGAGATCCTAATATTTTTAAGTGAGATGATGATAATAGCTTAGAGTTCTATTCTGTGAGTATCATTTGGAGAATGTTAAGGTGATAGCACCAAGATTGTTGAAACTGTAATCATATTATGTAAAATATCTACAGATTTCAGCACTAAGTGTGTACTGTACTCTTATTACATTAACTTTTAATCACATATTACTGTTACAGG TGAAGTTGAAGGGGACAAAGTTGGTGATCAAATCATAGAAATTTAGGGCATTTTTTCCCCATAATTGATTGATTGTGTTCTTGAAACCCCAGATTTCGTTCAGCCTTTTCAATTCTTACTTTTGATTTCATTTTCATTTCTCTCATAAAGTTGAAGCGATCGGGATCGCTAAATTCTTTTTTCGATATCTTTCAGCTCATCCTCTTTGTCTCTCGGATTCGATCAATTCTCCTCAAGTCCTGTTCAATTCGCCCCATTTCGATGTTTTTGGGGTTTACTCTTTGAATGTTAGGTCAATTTTCAAATCCCCTCTTTGTTTGTGCAAATTCTGGATTTGCAGCTTCGTCTCTTCGCGTTTTTTCTTCCGAAGATTGGGATCTTTCCGTTCTTTATCTCAACTTTCTCGGCAGACAAACTGACGCTCAAGGTTTCTTGAAGGGTCTTTTGCGAAGATGATTAGTCTGTAATCTTTGGCGTTTTTTTTTCGAACCGGGCTAGTTATTAGACACAATGCGTCTGTTTCCAGTGAGATCTAGCCCGGATTTTACCGAGGACAAGGAACAGAGCGGCAGTCATGCTTTGCTATATCTTAATGTCTATGATCTTACTCCTATAAATAACTATCTTTATTGGTTTGGACTTGGAATCTTTCATTCGGGTATTGAGGTTCATGGTATGGAGTATGGCTTTGGAGCACATGAATATCCTACAAGCGGGGTGTTTGAGGTAGAGCCAAAAAGTTGCCCTGGATTTATTTTCAGAAGGTCAGTGTTATTGGGAAGCACTGATTTGTCTCGTGCAGAATTTCGATCATTCATGGAGCACCTTTCTTCAGAGTATCACGGAGACACATATCATTTGATTGCCAAAAATTGCAACCATTTTACAGAAGAAGTCAGCATGCGACTAACTGGGAAGCCCATTCCTGGATGGGTGAATAGACTTGCCCGATTAGGTTCATTCTGCAATTGTCTTCTTCCAGAAAGCATTCAGATTTCAGCAGTGAGACACCTTCCTGATCATCCAGCATATTCTGATGACGATGATGGGTCGGAATCTCTTGCATCTTCTACATCAGCAAGGAGCGAAGCGGAGGAATCGGATCATCATTTACTGATGAGTCCCAATGGCGATGTAGCATTTTTAAAAGAGAAACCGGTGAAACTAGCTAGAGAACCTGTTTAATTCATTTGCTCATTGGTTCCAACTTCTTTGCCTTAATCAATTTATTGTTTGTATTTGTGAAATGTAGTATTGAATGTATCATTTGATCAGGCCAAACTACTTGAGATCCTAATATTTTTAAGTGAGATGATGATAATAGCTTAGAGTTCTATTCTGTGAGTATCATTTGGAGAATGTTAAGGTGATAGCACCAAGATTGTTGAAACTGTAATCATATTATGTAAAATATCTACAGATTTCAGCACTAAGTGTGTACTGTACTCTTATTACATTAACTTTTAATCACATATTACTGTTACAGG ATGCGTCTGTTTCCAGTGAGATCTAGCCCGGATTTTACCGAGGACAAGGAACAGAGCGGCAGTCATGCTTTGCTATATCTTAATGTCTATGATCTTACTCCTATAAATAACTATCTTTATTGGTTTGGACTTGGAATCTTTCATTCGGGTATTGAGGTTCATGGTATGGAGTATGGCTTTGGAGCACATGAATATCCTACAAGCGGGGTGTTTGAGGTAGAGCCAAAAAGTTGCCCTGGATTTATTTTCAGAAGGTCAGTGTTATTGGGAAGCACTGATTTGTCTCGTGCAGAATTTCGATCATTCATGGAGCACCTTTCTTCAGAGTATCACGGAGACACATATCATTTGATTGCCAAAAATTGCAACCATTTTACAGAAGAAGTCAGCATGCGACTAACTGGGAAGCCCATTCCTGGATGGGTGAATAGACTTGCCCGATTAGGTTCATTCTGCAATTGTCTTCTTCCAGAAAGCATTCAGATTTCAGCAGTGAGACACCTTCCTGATCATCCAGCATATTCTGATGACGATGATGGGTCGGAATCTCTTGCATCTTCTACATCAGCAAGGAGCGAAGCGGAGGAATCGGATCATCATTTACTGATGAGTCCCAATGGCGATGTAGCATTTTTAAAAGAGAAACCGGTGAAACTAGCTAGAGAACCTGTTTAA MRLFPVRSSPDFTEDKEQSGSHALLYLNVYDLTPINNYLYWFGLGIFHSGIEVHGMEYGFGAHEYPTSGVFEVEPKSCPGFIFRRSVLLGSTDLSRAEFRSFMEHLSSEYHGDTYHLIAKNCNHFTEEVSMRLTGKPIPGWVNRLARLGSFCNCLLPESIQISAVRHLPDHPAYSDDDDGSESLASSTSARSEAEESDHHLLMSPNGDVAFLKEKPVKLAREPV
BLAST of Lsi09G004570 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80 Identity = 142/224 (63.39%), Postives = 180/224 (80.36%), Query Frame = 1
BLAST of Lsi09G004570 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33 Identity = 75/183 (40.98%), Postives = 107/183 (58.47%), Query Frame = 1
BLAST of Lsi09G004570 vs. Swiss-Prot
Match: DESI2_CHICK (Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33 Identity = 77/182 (42.31%), Postives = 106/182 (58.24%), Query Frame = 1
BLAST of Lsi09G004570 vs. Swiss-Prot
Match: DESI2_MOUSE (Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32 Identity = 74/183 (40.44%), Postives = 107/183 (58.47%), Query Frame = 1
BLAST of Lsi09G004570 vs. Swiss-Prot
Match: DESI2_RAT (Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32 Identity = 74/183 (40.44%), Postives = 107/183 (58.47%), Query Frame = 1
BLAST of Lsi09G004570 vs. TrEMBL
Match: A0A0A0KN08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165840 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 8.4e-121 Identity = 215/226 (95.13%), Postives = 216/226 (95.58%), Query Frame = 1
BLAST of Lsi09G004570 vs. TrEMBL
Match: B9SZQ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0006420 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.6e-103 Identity = 183/224 (81.70%), Postives = 202/224 (90.18%), Query Frame = 1
BLAST of Lsi09G004570 vs. TrEMBL
Match: B9GYM3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07810g PE=4 SV=2) HSP 1 Score: 383.3 bits (983), Expect = 2.1e-103 Identity = 182/229 (79.48%), Postives = 204/229 (89.08%), Query Frame = 1
BLAST of Lsi09G004570 vs. TrEMBL
Match: A0A061GB44_THECC (PPPDE thiol peptidase family protein, putative OS=Theobroma cacao GN=TCM_015907 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.7e-97 Identity = 174/223 (78.03%), Postives = 199/223 (89.24%), Query Frame = 1
BLAST of Lsi09G004570 vs. TrEMBL
Match: A0A067L5Y9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03446 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.8e-97 Identity = 178/229 (77.73%), Postives = 201/229 (87.77%), Query Frame = 1
BLAST of Lsi09G004570 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 329.7 bits (844), Expect = 1.4e-90 Identity = 156/228 (68.42%), Postives = 192/228 (84.21%), Query Frame = 1
BLAST of Lsi09G004570 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 300.8 bits (769), Expect = 6.9e-82 Identity = 142/224 (63.39%), Postives = 180/224 (80.36%), Query Frame = 1
BLAST of Lsi09G004570 vs. TAIR10
Match: AT1G47740.1 (AT1G47740.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 224.2 bits (570), Expect = 8.2e-59 Identity = 107/199 (53.77%), Postives = 143/199 (71.86%), Query Frame = 1
BLAST of Lsi09G004570 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 214.9 bits (546), Expect = 5.0e-56 Identity = 95/156 (60.90%), Postives = 119/156 (76.28%), Query Frame = 1
BLAST of Lsi09G004570 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein) HSP 1 Score: 211.1 bits (536), Expect = 7.2e-55 Identity = 93/153 (60.78%), Postives = 118/153 (77.12%), Query Frame = 1
BLAST of Lsi09G004570 vs. NCBI nr
Match: gi|659073377|ref|XP_008437027.1| (PREDICTED: deSI-like protein At4g17486 isoform X1 [Cucumis melo]) HSP 1 Score: 443.0 bits (1138), Expect = 3.2e-121 Identity = 212/224 (94.64%), Postives = 216/224 (96.43%), Query Frame = 1
BLAST of Lsi09G004570 vs. NCBI nr
Match: gi|449469361|ref|XP_004152389.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus]) HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-120 Identity = 215/226 (95.13%), Postives = 216/226 (95.58%), Query Frame = 1
BLAST of Lsi09G004570 vs. NCBI nr
Match: gi|659073379|ref|XP_008437028.1| (PREDICTED: deSI-like protein At4g17486 isoform X2 [Cucumis melo]) HSP 1 Score: 431.8 bits (1109), Expect = 7.3e-118 Identity = 209/224 (93.30%), Postives = 213/224 (95.09%), Query Frame = 1
BLAST of Lsi09G004570 vs. NCBI nr
Match: gi|743908320|ref|XP_011047607.1| (PREDICTED: deSI-like protein At4g17486 isoform X3 [Populus euphratica]) HSP 1 Score: 388.3 bits (996), Expect = 9.3e-105 Identity = 184/226 (81.42%), Postives = 205/226 (90.71%), Query Frame = 1
BLAST of Lsi09G004570 vs. NCBI nr
Match: gi|743908318|ref|XP_011047606.1| (PREDICTED: deSI-like protein At4g17486 isoform X2 [Populus euphratica]) HSP 1 Score: 387.9 bits (995), Expect = 1.2e-104 Identity = 184/227 (81.06%), Postives = 205/227 (90.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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