ClCG01G004390 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGACAATGGACATTAGGGCATTTTTTCCCCATAATTGATTGATTGTGTTCCTCAAACCCCAGATTTCGTTGAGCCTTTTCAATTCTTCCTTTTGTTTCCATTTTCATTTCTCTCATAAAGTTGAAGGGATCGGGATCGCTAATCTCTTTCTTCGATCTCTTTCAGGTCATCCTCATTGTCTCTCGGATTCGATCAATTGTCCTCAATTTCTGTTCAATTCGCCCCATTTCGATGTTTTTATGGTGTAACCTTTGAGTGTTAGTTCAATTTTCAAATTCCCTCTTTGTTTGTGCAAATTCTGGATTTGCAGCTTCGTCTCTTCAGGTTTTTTCTTGCGAAGATTGAGATCTTCTTTATCTCAACTTTCTCGGCAGCCAAACTGACGCTCAAGGTTTTTCTTTTTATCCCTTGAAAATTCTCCCCAGTTCTCAGGTTTTTAGTTTTTGAGATTATCGTTTATAGAAATCTAGTAATTCTGTAGCTACTTATTTTTTGAATTTTCAGGTTTCTTGAAGGGTCTTTTGCGAAGATGATTAGTCTGTAATCTTTGGCGTTTTTTTCCATACCGGGCTGGCTATTAGACACAATGCGTCTGTTTCCAGTGGGATCTAGCCCGGATTTTACCGAGGACAAGGAGCAGAGCGGCAGTCATGCTTTGCTATATCTTAATGTCTATGATCTTACTCCTATAAATAACTATCTCTATTGGTTTGGGCTTGGAATCTTTCATTCGGGTATTGAGGGTATGTAAATTATATACTTCTTTACAATAGAGCTGTTGTTGTGTATAGATTCATTTGTTTATTATTGTTGTTATTATTTACTGGGAAGTTCTGTTTGCAATGGTGGCAAATTGGTTAGCCTGAGATTAATATATGAAGCATGGATAACCGAATGGTATGTTTTAGTTGCATTGGATTGGGAGGGAGCTGGAATTAGTTGAACTTGGAAGTTATTAGGAACATATCTTTGAGCTCACCCATTATTTGAGGTAGTAACTAGTTTGCAATCCTATATTTATGTTTTTTCTGAATGGATTGATGGGATATAGGAGAATTCAGAGTATGATCAATTGAACCTTCATGGGGCTATTGGCACTTATCTGTGAGAAATATTGAGCTCTTTCTTGAAATATATTAATGAATGGTCAGAGGAAAGTGTTTATTAAATTAATTAGGAATATGAAAGTTGAGTATGACATATTCCACAGGACTGTCGCAAATGTAAGTGAGCATGCCATTGTTTGGCAGTGGTTTTGTAGGAAATCTTCTTATTAAGTTTCATGTGTAACAGATTCTTCCATGGTTCTGTTGACTATGTGTTCATGCTAGTGAATTGTTCCTTATAGTGATGCTTATATCTAATTGATCATTTCATGCTTTGCCATTGTGTCAGTCGTGACATAGTGAGTACAACTAGAAGCCATTTTGAGTAACTACACATTCCTCAAGTTTTGTTCATTGTATAATATTTAGAAGATGGTTCAATAAGGGGAAAAAATTGGAGTACCTGTTTGAGTTGTTCCTATCATTATTGACTGTAGACAAATTAGTCAGCTGATGTTATCTTTCCATTCAATAGGATAAATGATTAAAATAGTTGGTCACATTTCTATAAAAAGATACGAGAAGCTTTGTGTATGTCGGGGACAAAATCCTTTTGTCACATTTAGGTCATGATCACCAACAACCTCATAGTAACATAACTGTCGATATATGCTTCTGTTTGAAAATTCCAATCATAATGTGTTGTTCTGGTTGCATTTATTATCCTTCCATAAAATTGTTTTTACTTGATTTGGTACTCAGTTCATGGTATGGAGTATGGCTTTGGAGCACATGAATATCCTACCAGTGGGGTGTTTGAGGTAGAGCCAAAAAGTTGCCCTGGATTTGTCTTCCGAAGGTCAGTGTTATTGGGAAGCACTGATTTGTCTCGTGCAGAGTTTCGATCATTCATGGAGCACCTTTCTTCAGAGTATCACGGTGACACATATCATTTGATTGCCAAAAATTGCAACCATTTTACAGAAGAAGTCAGCATGCGACTAACTGGGAAGCCCATTCCTGGATGGGTGAATAGACTTGCCCGATTAGGTAAGAAATCTTTTCTTCTACAGCAACAGCATGCAATTTTGTGTCACGCTATAAGCCTTGGGATGTTAATTGGAGTATACCTTCAAAATCTCCTTAAAATATTACTCCTAAATATTATAACCAATATTTTCTTAAGCCACCTCATTCTGTAAAGCTAGATTTAAATGTTTGTTGTCTTTAAAGTTTTCACTAAACGTTCATTTCTGATCATTACATCTTTCGTCCTTCATTTCATTGACACTTACCAACCTGTTACCTCTCTGGAAATGTTTAAAATTTTGGGTTGAATAAGATATGTATGATTTAATATAAAATGACGTTTTTATGGTGTGAACTTCAATAAAACAAGTCTAGTTTTGTTCTGTATTTGGATTCACTTTAGCTGGTTCCCATCTTAGAATTGCATTGTGGATATGCTACCACTTTGATTTTGACTCGTATATATTAGTGATGAACAGGGAAAATAGTTCTTTTACCTGATCTGATTTTAACACTAAAGTCGATCCCTCTAGAAGTATTTTTGATCCATTAGCTTCTTGTGTAGAAAGGTGTTTTTGCCGAGCTCCAACTACTATATATTCTTGTATTCTGCTGGGGGTTCTTTATGCTTGAATAGTTCTTTCACCTGATGATACTGTTGTTTGGAGCTTCAGGTTCATTCTGCAATTGTCTTCTTCCAGAAAGCATTCAGATTTCAGCAGTGAGACACCTTCCTGATCATCCAGCATATTCTGGTGTGTTTCTCAACATTTTCTCATGGGTGTGAATCGTTTATGCATTCTTCACTTTAGGAGTGATTTCCTTTTGGCGTTTTAATGAGTTAATGAAACTATATTTATCATGACAAAGCATCTGTTTATTTGTGATTAACTCACTGTAGTTTTACTTGAATTTACATGTGAAATGAACATATTGGGGATGGAAATGGGAACATAAATTAACATTATACATGCTCTGTATTGCCCTTAAGGTTTACGATCATTTTCGTCGTCCTGTTTAATTATTCTCTGTGATCTGGCATGTCACAATTCAGATGACGACGATGGGTCGGAATCTCTTGCATCTTCTACATCAGCAAGGAGCGAAGAGGAGGAATCGGATCATCATTTACTGATGAGTCCCAATGGCGATGTAGCATTTTTAAAAGAGAAACCGGTGAAAATAGCTAGGGAACCTGTTTAATTCATTTGCTCTTTGGTTTCAACTTCTTTGCCTCAATCAATTTATTGTTTGTATTTGTGAAATGTAGTATTTAATGTATCATTTGATCAAGCCAAACTACTTGAGATCCTAATATTTTAAGTGATGTGATGATAATAGCTTAGAGTTTCTCTATGCTGTGAGTATCATTTGGAGAATGTTAAGGTGAAAAAACATAGCACCAAGCTTGTTGAAACTGTAATCATATCATATATGTAAAATATCT GGGACAATGGACATTAGGGCATTTTTTCCCCATAATTGATTGATTGTGTTCCTCAAACCCCAGATTTCGTTGAGCCTTTTCAATTCTTCCTTTTGTTTCCATTTTCATTTCTCTCATAAAGTTGAAGGGATCGGGATCGCTAATCTCTTTCTTCGATCTCTTTCAGGTCATCCTCATTGTCTCTCGGATTCGATCAATTGTCCTCAATTTCTGTTCAATTCGCCCCATTTCGATGTTTTTATGGTGTAACCTTTGAGTGTTAGTTCAATTTTCAAATTCCCTCTTTGTTTGTGCAAATTCTGGATTTGCAGCTTCGTCTCTTCAGGTTTTTTCTTGCGAAGATTGAGATCTTCTTTATCTCAACTTTCTCGGCAGCCAAACTGACGCTCAAGGTTTCTTGAAGGGTCTTTTGCGAAGATGATTAGTCTGTAATCTTTGGCGTTTTTTTCCATACCGGGCTGGCTATTAGACACAATGCGTCTGTTTCCAGTGGGATCTAGCCCGGATTTTACCGAGGACAAGGAGCAGAGCGGCAGTCATGCTTTGCTATATCTTAATGTCTATGATCTTACTCCTATAAATAACTATCTCTATTGGTTTGGGCTTGGAATCTTTCATTCGGGTATTGAGGTTCATGGTATGGAGTATGGCTTTGGAGCACATGAATATCCTACCAGTGGGGTGTTTGAGGTAGAGCCAAAAAGTTGCCCTGGATTTGTCTTCCGAAGGTCAGTGTTATTGGGAAGCACTGATTTGTCTCGTGCAGAGTTTCGATCATTCATGGAGCACCTTTCTTCAGAGTATCACGGTGACACATATCATTTGATTGCCAAAAATTGCAACCATTTTACAGAAGAAGTCAGCATGCGACTAACTGGGAAGCCCATTCCTGGATGGGTGAATAGACTTGCCCGATTAGGTTCATTCTGCAATTGTCTTCTTCCAGAAAGCATTCAGATTTCAGCAGTGAGACACCTTCCTGATCATCCAGCATATTCTGATGACGACGATGGGTCGGAATCTCTTGCATCTTCTACATCAGCAAGGAGCGAAGAGGAGGAATCGGATCATCATTTACTGATGAGTCCCAATGGCGATGTAGCATTTTTAAAAGAGAAACCGGTGAAAATAGCTAGGGAACCTGTTTAATTCATTTGCTCTTTGGTTTCAACTTCTTTGCCTCAATCAATTTATTGTTTGTATTTGTGAAATGTAGTATTTAATGTATCATTTGATCAAGCCAAACTACTTGAGATCCTAATATTTTAAGTGATGTGATGATAATAGCTTAGAGTTTCTCTATGCTGTGAGTATCATTTGGAGAATGTTAAGGTGAAAAAACATAGCACCAAGCTTGTTGAAACTGTAATCATATCATATATGTAAAATATCT ATGCGTCTGTTTCCAGTGGGATCTAGCCCGGATTTTACCGAGGACAAGGAGCAGAGCGGCAGTCATGCTTTGCTATATCTTAATGTCTATGATCTTACTCCTATAAATAACTATCTCTATTGGTTTGGGCTTGGAATCTTTCATTCGGGTATTGAGGTTCATGGTATGGAGTATGGCTTTGGAGCACATGAATATCCTACCAGTGGGGTGTTTGAGGTAGAGCCAAAAAGTTGCCCTGGATTTGTCTTCCGAAGGTCAGTGTTATTGGGAAGCACTGATTTGTCTCGTGCAGAGTTTCGATCATTCATGGAGCACCTTTCTTCAGAGTATCACGGTGACACATATCATTTGATTGCCAAAAATTGCAACCATTTTACAGAAGAAGTCAGCATGCGACTAACTGGGAAGCCCATTCCTGGATGGGTGAATAGACTTGCCCGATTAGGTTCATTCTGCAATTGTCTTCTTCCAGAAAGCATTCAGATTTCAGCAGTGAGACACCTTCCTGATCATCCAGCATATTCTGATGACGACGATGGGTCGGAATCTCTTGCATCTTCTACATCAGCAAGGAGCGAAGAGGAGGAATCGGATCATCATTTACTGATGAGTCCCAATGGCGATGTAGCATTTTTAAAAGAGAAACCGGTGAAAATAGCTAGGGAACCTGTTTAA MRLFPVGSSPDFTEDKEQSGSHALLYLNVYDLTPINNYLYWFGLGIFHSGIEVHGMEYGFGAHEYPTSGVFEVEPKSCPGFVFRRSVLLGSTDLSRAEFRSFMEHLSSEYHGDTYHLIAKNCNHFTEEVSMRLTGKPIPGWVNRLARLGSFCNCLLPESIQISAVRHLPDHPAYSDDDDGSESLASSTSARSEEEESDHHLLMSPNGDVAFLKEKPVKIAREPV
BLAST of ClCG01G004390 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.2e-81 Identity = 140/219 (63.93%), Postives = 176/219 (80.37%), Query Frame = 1
BLAST of ClCG01G004390 vs. Swiss-Prot
Match: DESI2_CHICK (Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33 Identity = 77/182 (42.31%), Postives = 105/182 (57.69%), Query Frame = 1
BLAST of ClCG01G004390 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33 Identity = 75/183 (40.98%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of ClCG01G004390 vs. Swiss-Prot
Match: DESI2_MOUSE (Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.3e-33 Identity = 74/183 (40.44%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of ClCG01G004390 vs. Swiss-Prot
Match: DESI2_RAT (Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33 Identity = 74/183 (40.44%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of ClCG01G004390 vs. TrEMBL
Match: A0A0A0KN08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165840 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 1.5e-122 Identity = 216/226 (95.58%), Postives = 218/226 (96.46%), Query Frame = 1
BLAST of ClCG01G004390 vs. TrEMBL
Match: B9GYM3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07810g PE=4 SV=2) HSP 1 Score: 385.2 bits (988), Expect = 5.5e-104 Identity = 181/229 (79.04%), Postives = 205/229 (89.52%), Query Frame = 1
BLAST of ClCG01G004390 vs. TrEMBL
Match: B9SZQ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0006420 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 4.6e-103 Identity = 181/224 (80.80%), Postives = 202/224 (90.18%), Query Frame = 1
BLAST of ClCG01G004390 vs. TrEMBL
Match: A0A061GB44_THECC (PPPDE thiol peptidase family protein, putative OS=Theobroma cacao GN=TCM_015907 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 3.4e-98 Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 1
BLAST of ClCG01G004390 vs. TrEMBL
Match: A0A067L5Y9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03446 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.7e-97 Identity = 177/229 (77.29%), Postives = 202/229 (88.21%), Query Frame = 1
BLAST of ClCG01G004390 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 328.9 bits (842), Expect = 2.4e-90 Identity = 154/228 (67.54%), Postives = 190/228 (83.33%), Query Frame = 1
BLAST of ClCG01G004390 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 302.8 bits (774), Expect = 1.8e-82 Identity = 140/219 (63.93%), Postives = 176/219 (80.37%), Query Frame = 1
BLAST of ClCG01G004390 vs. TAIR10
Match: AT1G47740.1 (AT1G47740.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 227.6 bits (579), Expect = 7.4e-60 Identity = 107/199 (53.77%), Postives = 142/199 (71.36%), Query Frame = 1
BLAST of ClCG01G004390 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 212.6 bits (540), Expect = 2.5e-55 Identity = 95/156 (60.90%), Postives = 117/156 (75.00%), Query Frame = 1
BLAST of ClCG01G004390 vs. TAIR10
Match: AT2G25190.1 (AT2G25190.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 209.5 bits (532), Expect = 2.1e-54 Identity = 102/199 (51.26%), Postives = 129/199 (64.82%), Query Frame = 1
BLAST of ClCG01G004390 vs. NCBI nr
Match: gi|659073377|ref|XP_008437027.1| (PREDICTED: deSI-like protein At4g17486 isoform X1 [Cucumis melo]) HSP 1 Score: 448.7 bits (1153), Expect = 5.8e-123 Identity = 213/224 (95.09%), Postives = 218/224 (97.32%), Query Frame = 1
BLAST of ClCG01G004390 vs. NCBI nr
Match: gi|449469361|ref|XP_004152389.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus]) HSP 1 Score: 446.8 bits (1148), Expect = 2.2e-122 Identity = 216/226 (95.58%), Postives = 218/226 (96.46%), Query Frame = 1
BLAST of ClCG01G004390 vs. NCBI nr
Match: gi|659073379|ref|XP_008437028.1| (PREDICTED: deSI-like protein At4g17486 isoform X2 [Cucumis melo]) HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-119 Identity = 210/224 (93.75%), Postives = 215/224 (95.98%), Query Frame = 1
BLAST of ClCG01G004390 vs. NCBI nr
Match: gi|743908320|ref|XP_011047607.1| (PREDICTED: deSI-like protein At4g17486 isoform X3 [Populus euphratica]) HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-105 Identity = 183/226 (80.97%), Postives = 206/226 (91.15%), Query Frame = 1
BLAST of ClCG01G004390 vs. NCBI nr
Match: gi|743908318|ref|XP_011047606.1| (PREDICTED: deSI-like protein At4g17486 isoform X2 [Populus euphratica]) HSP 1 Score: 389.8 bits (1000), Expect = 3.2e-105 Identity = 183/227 (80.62%), Postives = 206/227 (90.75%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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