Lsi09G003270 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G003270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Basic helix-loop-helix DNA-binding superfamily protein, putative
Location	chr09 : 3410954 .. 3420979 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGACCTTCCATTTCTTCGGTCTCCGACCATTCCTCCAACATCGGCATCACTCTCCGGCTGTCTCTCCGGCCATTTTGTGCCCCTTCTCTCCGTTGTTCGGCCGTCGGTTGAGAACAACAACTGTACTTTTTCTCTCCATATCTCCGTCTTTCAGCCGTCGGTTGATAATCTGCCGGTTGCTTCAAATTTGAAGCTCTCAACACAAAGCTCACTATCTTTCGCTCATTTTGGCATTTGGAGAAATTTAAGTTTAGGTAATTTTCTCTTTTTCTACAATATAATTTCATCTTGGCATTTGGAAAAGTCTCTTTTTCTTTGATGATAAGAATGTTTGATTATTGTTTGGCATTTTGGCATTTGGCATGTATTGCTTAGAATGTTTGATTTTAGTTTGATGATAAGAATATTTGATTTCAGTTTGGCATTGCTAAGAATATTTGAATTCGAACTTACATATTATTACTTGATTTGTTTATGGATTTGGTTGGAAATGAAGTCTTTCATGAAAACTAGTTTGGAAATGATTTGTTTATGGATTTACACTTTTTTTTTAGGAAAAGATACATTGGGTTAGGGGTGCACCGGTTCATCTCCACTAGATCCACTTTCTTAACACCCTCAACACTAAAAAAAAAGTCTCTATTAGGTTTTTAAGCGACTGCTTTTTAATACGGATTTGGTTTATTGAAATGAAGTCTTTTCATGTGAACTTTAGTTGAAAACAAGTTTTATGGTTTATTGGTAAAATATGATTATATTGTCAAATTCTAATTACACTTTGCACATTAACCTCATATAGGTGATTTTATGTTGAGCATTAAACTTAAGATAATCAGTTCTTTGGGAGTTTTTCAGCAGGTATTTGAAAGGTCAAACGATATCCAAATTAAATGTATGACCTATGGATTTTGATGCCCCGAATGTGTACTTTCTAATGGTTCAAGTTTCAGGACGTTTGGAGTTTTCTAGAAAACGTTATGGCAGTTTGAGTAATGAAAGGTCAAGAATTACTGCAACTTTCCAAATTCTATCTTAATTATTGTAATCTCTTTAATTTTGCTTTTATTAAAGGAATTTAGAGAGACACCTTGTGAGAATATATATAGTGATATTGTAACCCTTGCCAAAAGTAAGTATGTGGAAGAAATTGTAGAAGTAAAAGCAATTTATAAAAGTAAAAGCAATTTACTTTGTACTTTGTTCTTTCTCTCTTCAAAGGTCTCCTCCTTTTGTCAAATTGGTATCAGAGCTATGTCGAATCATGGGAGCACAATGTTTGGTCAGATGTCATTACCACGACTCACCAAGACAAACTATGACAATTGGAGCATTCAAATGCATGCCTTGCTTGGTGCTCAAGACGCATGGGAAGTAGTCCAAGAAGGTCTTGAAGAGAAGGCTCCAATTGCAAATCCAACAGCAAATCAATTGAGGGCGATAAAAGAGATGCGAATGAAAGACAAAACCGCTCTCTATCTCATGTTCCAAGCTGTGGATGAGTCAGACTTTGAAAAAATTGCAGGTGCAAAGACATCGAAGGAAGCATGGGACACATTGGAAAAGTCTTTCAAGGGTGTTGATCGAGTTAAACAAGTGCGGCTCCAAAATTTTCGAGGCGAATTGGAAACCATGAAAATGAAGGAGTCAGAAGGAGTATCTGACTACATCACCTGGGTTCAAACGTGGTGAACCAACTTAAACGCAATAGAGAAACCCTCGAAGATGTCAGGGTTGTGGAGAAAATCCTTCGATCATTGACAAATGAATTTGAAAATGTCGTATGTGCAATCGAGGAGTCAAAGGATTTGGCAGAAATGACTATTGATGTTCTTGCAGGTTCCCTTGAAGCGCATGAACAAAGAAAGAAAAAAAAAAGAAACAAGAAGTCCTAGAGGAGGCCTTACAAGCAAAGATGACCATCAAAGAAGACAAGACAATGTATGCACAACACAATCGAGGAAAAGGACATGGTCGAGGGGGTCGCAGTTTCGGTCGCGGCAAAGGTCGTGGTCGTGGAAATAACAATGATGAGAAAGGACAAACAAGCCAACAAAATTGGCGTGGACGAGGCCGAGGTCGTGGAAGAGGCGGTCGCTCAAATCGTCAAAATGTTGAATGTTACAATTGTGGAAAATATGGACACTATGCAAAAGAATGATATTCTGAGAAGAACGTAGAAGAAAACGCGAATTTAGTCGCAGAAGAAGAAACCAAAGATGACGGTATTCTCATGATGACCCATGAAGGCACCGCTCCGGATAGCGACATGGTGTGGTATCTTGACACAGGTGCAAGCAATCATATGTGTGGGCATGAACATTTTTTTGTTGATATGCAGGAGATAGAAGATGGACATGTGTCTTTTGGAGATGCATCAAAAGTTCAAGTCAAAGGCCGAGGAAAAATACGTTTTCTTCAAAAAGATGGAAAAGAAGGTACTATGGAGGATGTCTATTTTGTACCTGACTTGAAGAATAATATTCTAAGCATGGGGCAGTTATTGGAAAAAGGATGTTCAGTCATCATTAAAGATCGAATGTTATATTTGAAAGACAGAAATGATCGGTTACTTGCACACGTTGAGATGGCGAAAAATCGAATGTTCAAAACTCAACCTAAAGAATATACAAGAAAAGTGTTTACAAGTCAACATGGAGGACAAAGCATTCTTATGACACTTACGGTTTGGACACTTACACTACGGCGGGCTAACAGAGTTAGCAAAGAAGGACATGGTCCACGGACTACCAAAATTGGACTACACCAAGAAGTTTTGTGAAGGTTGTGTACTTGGAAAGCAAGCAAGGACTATGTTCCAAAAGAAAGCTGAATATTGTCCAAAGAGACCTCTCGAGTTAATACACACAAACATATGTGGCCCAATCACCCTAATGTCTTTCAGTGAAAAAAGTATTCTATTACTTTTATTGATGACTATACAAGAAAGACTTGGGTTTATTTTTTGAAGGAAAAATCAGAAGCATTTGAAGTATTCAAGAAGTTCAAGGTGATGGTAGAGAAGACAACCAATCTTTACATCAAGGCCTTACGATTAGATAGAGGAGGAGAATACATGTCAACTATTTTCACAAATTATTGTGAGGAACAAGGTATCAAAAGATTTTTGATTGCACCATATTCACCTCAGCAGAATGGCGTTGCAGAAAGAAAAAATCGAACGATCCTTGATATGGTTCGATCAATGTTGAAAAGTAAAGACATGCCAAAGGAATTCTGGGTGGAAGCAGTACGATGTGCTGTGTATGTGCAAAACCGATGTCCACATACAAAATTGACAAATCAAACACCTCAAGAGGCTTGGAGTGGTCATAAACCAACCGTATCACACATTAAAGTGTTTGGTAGTGTGGCCTATGCGCATGTACCAGACCAAAAAAGAACCAAACTTGATGATAAGAGTAAGAAGTATGTGTTCATTGGGTATGACGAGAAGACAAAGGCTTACAAGTTATTCAATCCAATTGAAAAGAAGGTGATTGTAAGCCGCGATATTCAGGTAAATGAAGAAAGCACGTGGGACTGGAAGAACCAAAAAGAGGCACTACAAGGAGAGTCATTAACAATTGCACCTATAATCACTCCAATGACTTCTCAAATATCTGTTGAAGAGGAAAGACCGAGTCAACCTAGGATGCGGAGTCTACAAGATCTATACAACTCAACCGATGAAGTGCACCTAGTTTGCTTATTAGCAGACTCGGAGGGCATTACTTTTGAGGAAGCCATAAGAGATAAAAAGTGGAAAGCCGCAATGGATGAAGAAATAGAAGCAATCGAAAGAAACAAAACTTGGGATTCGGTGGAACTACCCGATAGATGTAGACCCATTGGTGTGAAATGGGTATACAAGAAAAAAATGAATGCCCAAGGTGAGACTGAAAGGTACAAGGCGCGTCTAGTTGCAAAAGGTTACATACAAAAGGCAGGAATCGATTATGACGAAGTTTTTGCTCCAGTTGCAAGAATGGAAACAATTAGACTTCTCCTATCTCTAGCTGTGCAATTCGAATGGGCTATTTATCAAATGGATGTGAAATCAGCATTTTTAAATGGAGTTCTTGAAGAAGAAGTCTATGTGGAGCAACCTCCTGGATACATGAAACCTGGAAAGGAAAGTAAGGTGTTGAAACTAAAGAAGGCGCTCTATGGGTTAAAGCAAGCACCTCGAGCATGGAACTCTCACATTGACACTTACTTCAAAAAGAACAAGATCATTCAGTGCCCTTATGAGCATGCATTATACGTAAAAAAAGGAAGAAGGTAATCTGCTTATCGTTGCCCTTTATGTTGATGATCTTATTTTCATGGGGAGCAATGAGAACTTAGTTCTGGAATTTAAAGATGCTATGATGCGAGAGTTTGAAATGACAAACTTCGGATTGATGAAATATTTTCTTGGTCTTGAAATTAGACAAGGGAATTTTGGAATTTTTGTTTCACAGGAAGCATATGCCAGAGACATTCTGAAGAAAAATAAGATGGGAGAATGCAAGCCTTTAGCAACACCTATGGAGCTTGGCACAAAACTCTCTAGATTTGAGGGAGGAGATCAAGTAAATGCACATGAGTATCGAAGTTTGATAGGGAGTCTGAGATATCTCACATGCACAAGACCGGATATTGCATATAGTGTCGGTGTAGTGAGTCGATACATGGAGGATCCAAGACACTCGCACCTCAAAGCCATTAAAAGAATTCTTCGATACATTCGAGGAACAGAATCACTCGGGCTTCTCTATACAAAGTCAAGTGAATACAAGTTGATAGGATACTCTGACAGTGATTGGTGCGGCGATATAGATGATAGGAAAAGCACGGGAGGATATGTGTTCTACATGGGTAATACAGCCAATCGTAACTTTGTCAACATGTGAAGCAGAATATGTAGCAGCATCTTGGTGTGTGTGTCACACAATTTGGCTAAGAAATTTACTGCATGAGTTAATACTAGAACAACATGAGGCAACTGAAATACGAGTCGACAATAAATCAGCCATTGAGTTAGCAAAGAATCTTGTCCATCATGAAAGAAGTAAGCATTATTGATGCTCGGTTTCATTTCATTAGAGAACATGTAAAAAATGGAGAAGTGAAAATGATTCATGTCTCAAGTCATGATCAAGTAGCTGACATTTTCACAAAACCTCTACCAACAACTCTATTTGAAAATTTGAAGAAGATGATCGGGATGAAGGACTCGAAAGATTTGAGTTTAAGGAAAGATTTTGTTGAGCATTAAACTCAAGATAATCAATTCTTTGAGAGTTTTTCAGCAGGTATTTGAAAGGTCAAACGATATCCAAATTAAATGTATGACCTATGGATTTTGATGCCCCGAATGTGTACTTTCTAATGGCTCAAGTTTCAGGACGTTTGGAGTTTTCTAGAAAACGTTATGGCAGTTTGAGTAATGAAAGGTCAAGAATTACTGCAACTTTCCAAATTCTATCTTAATTATTGTAATCTCTTTAATTTTGCTTTTATTAAAGGAATTTAGAAAGACACCTTGTGAGAATATATATAGTAATATTGTAACCCTTGCCAAAAGTAAGTATGTGGAAGAAATTGTAGAAGTAAAAGCAATTTACTTTGTACTTTGTTCTTTCTCTCTTCAAAGGTCTCCTCCTTTTGTCAGATTAATCAAAAGCATCAATAAAGACCCAAATTTTTTCCTCATTTCTATTCTTACTTCTATAAGCATCCATAAGCCTCTAATAATTCTTAACAATTTAACTTTAGTCTATTGAATTAGTTAAGCTTATACTTTTAAGCCAAGTGTCAATGACTTGTAAAAAAACCCAAACAAATTATTTTAAAATTTTGGTTCGTTGCTCAAGTGTCAATGACCATTTTTTAAACAATTAACTATAAATTTACTACTTGTAAGCCATAAGTTAATCATAACTCTTTGTCTAAATAATACCAGTTTATAACTTGTTTTGGATTACAAGTTGGACAAAAAAAAAATTTATTTCTAAGGATGAATAAAGAATGGATCAAACTTAGAAATAAATTTTCGGTCGAGTATAGAGAAATGTATCCCAATTCTTAGATGTGGTAAAGTTTCATGTTAATGATTGTATGAATGCAATGTGGGAGTCATTAGATGGTTTGGAACGACATTTATTAACATATGGAATATCTCCCTGCTACTCTGAATGGATATATAATGGAGAGCCAGTCAACTTATCTGGAGGTTTTGAAAGTCCTACAACTCATTCAATACACAACGATGAAGTAAATAGTATAGCGTGTAATGTGGTTGAAGAAAATGAAATGTTAAATCTTATAAACGATCTACAAGTCCAATTGAAAACGAAGTTGCAGATGAAGAAGACATTGAGAATGAAATGTCCACTAATACTCAAGAAAGACATACCACAAACTTGTTTGAGGACTTAACGACTGAAGCTCGTAATGAATTATGTTAAATGAGTTTAGCTCAACTGACATAAAATATATATTAATGACTAAGAGACATATGGTGTAATTTTTTCAATATAAATATGAAGCTATATGGTGCGTATTAAGTATTAACCAAACATAGCATATACATGTGCATGTGGTAAGTCAAAAGGGTAGATATATAAGGTGCTATAATGACAAAATCTATATCTAAGCAAATTGTCCTTCATTTGTAGTAAATGACTGTAATACCCTCATTTCGAAGAGGCATGACAAGTGGAGAGAAGAGACAAAAAAAAAAAAAACATAAAGAAACTACACACATCCATTTGTTTTTATCCTTTGTACCTTTTGGTTTTATTTTTTGGGTTGATATTTTTTTTTTCAATTTTAGATTTCTCCAACAAACACAATAACGAAACTAAAATTTTATTTTCTTCAGGATTAGTAATATAATTTTACCTTTTTATTTTATCTTTTTTTATTTCACAAATAAATAAACTACAAATTATTTTATTTTTCTTTGGCCCAAAATGTCAGAGAGTGACAATTAAAAGTTTTTGTTATTTATAAGGAAAAAGTTGAATCATGTTAAATTTGAGCTTTGAGAACCAGAAACTTGCTGTTGTCAATGAAGAGATGGCATTATTGTCTCCAAATTTAAAATTTTATCTATTATGGTGAAAGTTAAATTTGGTGAAACAAATTTATATCAACATTAAGAATTTTGATGGCTACAAGAGGCCAAATGAGACTAGAAAATTAGTAAATTGTGAATGATTAAATGAATAAACCTTTCAAATGAATTAAAAATTATATTGTCCACGCCTGTATGCAATTTTCACCCATTTGAATTTTTTGTACGGATGGCCCCTTTTTGGGCGGCCAATTGAAAAATTAGTACTTTTTTAAAAATTGAATGAAAAGTGGACCTCTGCTTGTTACGTGTATTTGTATTATGAGGTTTTTCCTTGTCATTCTCCTGACTACAGTATATCTCAATGAAATGCCCGATAAAAATTGAAGTCATCGCATTATAAGTCAAGTGCATTGGACGTGTCTTCCAACTAGTTTTTTTAAAAAGTTATAGTTGAACACTTAACCGTAAAGTAAAGTAAATCACCGACGATGTACATATATTGTTAATATACAATATATCTCTTGTAACATTTTGTTCTATTTTCGTAAAATATTTTATCATGTGATAAACACTACTACTAATATTTAACAATAATGACTATTATTGAAGAAGTCTTCATTTTAGCAACCTAGTGAAGATATTACAGTGTACCTACTGATTCCTCTCTTGTCCAATTACTTTTTAAAAAAATATAATAAAATAGAACGCAATTTACCATTAGGTTAGAGATTCAATTTTGACTGCTAGACTCAAAATACATAGTTTTTACTCCACAGTTCAAATTTGTCAGTATAAATAGAGGGTTTTTTGGGTAGATTTTCACAAGCCCTCCAATAATGTTTTTCTAGGAAAGCTAAAGAGGAAGAGAAAATCTCTCTCTCTTGTTAGGAGGCTTAAAAAATGGAATTCAATGTTGAGTCACCCTTTTCATTTGACTTAGGAGATGACTTATTCCCTTTGCCTTCTCTTCCATCGTCCTCCATGTTCTCTCCGCCGTTGGACAACGATAACGGCGTCTGCCAAAAGCAAAAAAATGGCCGCCGGAAAAAGCCACCGGCTAACACTCGCAATGATAATGGCGATGAAAGCCTCGACGAGAAAAAGAAGAAGAAGAAAGCTCATAGAGATGTGGAGAGGCAAAGAAGACAAGAAATGTCTTCTCTTTACAACTCTCTTCGCTCACGTCTCCCTCTTGAATACCTCAAGGTAATATTTTATTCTTTGGATTAGAATTTTTTTCACCTATATGATTCAAAAAAAAATTTTTTAGTACAATCGAAGATAGAAAGATATTCGAGCCACAAGTCTCTTGGTCGCTAACACATCTATATATACTAATTGAGCTATACTTGTTTTGTTAACTATATCTTTAAATTCATTGTATAAAGGAAAATTTTCACAGATAAAAACAATGTCAAACTATTTACAGAAAATAGCAAAAAAAAAAAAAAAAAAAACACTGATAGACATTGATAGACTTTTATCAATCTCTATCAGTGATAGACTTCTATCATTTCTATCATTCATAGACTCTGATAGACTTCTATCAGCATCTATCACAACTATCTAAAAAATTTGTTATTTTGTATAAATAATTTTTCTTATTTTTTCTATTTTTAAAAATTCTCCTAGGTTAAAAAGTAAACAACTCAATTTCAGCTAATTTACCCACTATTTTTAAATTTGATTTATCACATAATGTCAAACAATTAAATAATACCGTCCTTATTTTCAAAAAATAAATAAATAAATAATACCGTCCTTTCCAATTAAAAGGAGGAAAAGAAAAACTATGATGTCTTTTTTTTCGATTGTATCAATTTCTTAGATGTATGTTTTGTAATTCATTAGATGCACGTGAGAAGCCTTAAAAAAAATAATCAAAACTTTGAACAAGTTTAAGGCATGTTGGGCAGATCATTTGAAAATACAAATTTAAAAATAGGAGATTCAATAAAAATAAAATTATATTTTATGTTTTAAAGTATATGTTTGGTAGCAAATTCAGAAATTAAATTCTAATTTAAACAATTATTTAAAACGCATTCGATATTATATATTTATAAATCATAAAATTAGTTGTAGTTCCCCACTTGAGTTTCCATCTTTGTATTAAATTTTTTTGTGTTATTTTCAAATATAAAAAAAAAATGAGTCAAATTATTTACAAATATAGAAAAAATTTACTGTCGCGATAGAATTCTATCGCTTAGAGATAGACAGCGATAGAAGTCTATCCTTGATAGTTTGTGAAATTTTTCTATATTTGTAAATAATTTGATATTTTTTTTGTTTATAATAATTTTCCTAATTTTTTTTTTTAATTTTAGATTTTAAAAACTTCATACCATTTGGGTTTTTCTACACACGGATGAGTCAAAATGAAATCTATCCCACTTTAGCTGAAGTATTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTTTTGCATAGGTCATATTAGTGTGAAACAATCTTCAAATATAAATGTTCTTAATACTCTACTCATAGGGCAAAAGATCAATATCCGACCACGTACATGAGACAGTTAATTACATTCAACACATGCAAGGAAGAATCCAACAACTGTCTGATAAAAGAGATGAACTGAGAAAACTCTCCGGCGAAAACACGGCCACCGTCAGTACGGCGAAAATGATTAATTCCTCACAAAGGGACTCGGTGTTGGTGAGGGCAAAAAATGGATCGGGAATAGAAGTTGTTATAGACATTACCACAAAACAAAAGCTCCCTGTTTCCAACTTTCTTCAAGCTTTAGCTGATGAAGGGCTTGAAATTCTTAGCTGCAATTCGACCAAACTAAATGAGAGGTTCGTTCACACCATAGACTGTCAACCTATTATAAACGATGGCTGCTATCCAAGCATTGATGTCTCTGAGCTTCAGCATAAGTTAACGAATTTGGAATATTTTCATTTGGAT

mRNA sequence

GTCGACCTTCCATTTCTTCGGTCTCCGACCATTCCTCCAACATCGGCATCACTCTCCGGCTGTCTCTCCGGCCATTTTGTGCCCCTTCTCTCCGTTGTTCGGCCGTCGGTTGAGAACAACAACTGTACTTTTTCTCTCCATATCTCCGTCTTTCAGCCGTCGGTTGATAATCTGCCGGTTGCTTCAAATTTGAAGCTCTCAACACAAAGCTCACTATCTTTCGCTCATTTTGGCATTTGGAGAAATTTAAGTTTAGGAGATGACTTATTCCCTTTGCCTTCTCTTCCATCGTCCTCCATGTTCTCTCCGCCGTTGGACAACGATAACGGCGTCTGCCAAAAGCAAAAAAATGGCCGCCGGAAAAAGCCACCGGCTAACACTCGCAATGATAATGGCGATGAAAGCCTCGACGAGAAAAAGAAGAAGAAGAAAGCTCATAGAGATGTGGAGAGGCAAAGAAGACAAGAAATGTCTTCTCTTTACAACTCTCTTCGCTCACGTCTCCCTCTTGAATACCTCAAGGGCAAAAGATCAATATCCGACCACGTACATGAGACAGTTAATTACATTCAACACATGCAAGGAAGAATCCAACAACTGTCTGATAAAAGAGATGAACTGAGAAAACTCTCCGGCGAAAACACGGCCACCGTCAGTACGGCGAAAATGATTAATTCCTCACAAAGGGACTCGGTGTTGGTGAGGGCAAAAAATGGATCGGGAATAGAAGTTGTTATAGACATTACCACAAAACAAAAGCTCCCTGTTTCCAACTTTCTTCAAGCTTTAGCTGATGAAGGGCTTGAAATTCTTAGCTGCAATTCGACCAAACTAAATGAGAGGTTCGTTCACACCATAGACTGTCAACCTATTATAAACGATGGCTGCTATCCAAGCATTGATGTCTCTGAGCTTCAGCATAAGTTAACGAATTTGGAATATTTTCATTTGGAT

Coding sequence (CDS)

GTCGACCTTCCATTTCTTCGGTCTCCGACCATTCCTCCAACATCGGCATCACTCTCCGGCTGTCTCTCCGGCCATTTTGTGCCCCTTCTCTCCGTTGTTCGGCCGTCGGTTGAGAACAACAACTGTACTTTTTCTCTCCATATCTCCGTCTTTCAGCCGTCGGTTGATAATCTGCCGGTTGCTTCAAATTTGAAGCTCTCAACACAAAGCTCACTATCTTTCGCTCATTTTGGCATTTGGAGAAATTTAAGTTTAGGAGATGACTTATTCCCTTTGCCTTCTCTTCCATCGTCCTCCATGTTCTCTCCGCCGTTGGACAACGATAACGGCGTCTGCCAAAAGCAAAAAAATGGCCGCCGGAAAAAGCCACCGGCTAACACTCGCAATGATAATGGCGATGAAAGCCTCGACGAGAAAAAGAAGAAGAAGAAAGCTCATAGAGATGTGGAGAGGCAAAGAAGACAAGAAATGTCTTCTCTTTACAACTCTCTTCGCTCACGTCTCCCTCTTGAATACCTCAAGGGCAAAAGATCAATATCCGACCACGTACATGAGACAGTTAATTACATTCAACACATGCAAGGAAGAATCCAACAACTGTCTGATAAAAGAGATGAACTGAGAAAACTCTCCGGCGAAAACACGGCCACCGTCAGTACGGCGAAAATGATTAATTCCTCACAAAGGGACTCGGTGTTGGTGAGGGCAAAAAATGGATCGGGAATAGAAGTTGTTATAGACATTACCACAAAACAAAAGCTCCCTGTTTCCAACTTTCTTCAAGCTTTAGCTGATGAAGGGCTTGAAATTCTTAGCTGCAATTCGACCAAACTAAATGAGAGGTTCGTTCACACCATAGACTGTCAACCTATTATAAACGATGGCTGCTATCCAAGCATTGATGTCTCTGAGCTTCAGCATAAGTTAACGAATTTGGAATATTTTCATTTGGAT

Protein sequence

VDLPFLRSPTIPPTSASLSGCLSGHFVPLLSVVRPSVENNNCTFSLHISVFQPSVDNLPVASNLKLSTQSSLSFAHFGIWRNLSLGDDLFPLPSLPSSSMFSPPLDNDNGVCQKQKNGRRKKPPANTRNDNGDESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQLSDKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNLEYFHLD

Homology

[Close]

BLAST of Lsi09G003270 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.9e-28
Identity = 81/207 (39.13%), Postives = 133/207 (64.25%), Query Frame = 1


Query: 116 KNGRRKKPPANTRNDNGD-------ESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRL 175
           K  +R++P ++     G        E+ D KKKKK  HRD+ERQRRQEM++L+ +LR+ L
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 176 PLEYLKGKRSISDHVHETVNYIQHMQGRIQQLSDKRDELRKLSGE----NTATVSTAKMI 235
           PL+Y+KGKR++SDHV+  VN+I+  + RI++LS +RDEL + +G+    N     T   +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 236 NSSQRDSVLVRAKNGSGIEVVIDITTK--QKLPVSNFLQALADEGLEILSCNSTKLNERF 295
             S+  +V+V+  + SG+EVV+   +   + LP+S  L+ + ++GLE++S  +T++N+R 
Sbjct: 130 GKSEPATVMVQP-HVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRL 189

Query: 296 VHTIDCQPIINDGCYPSIDVSELQHKL 310
           +HTI  + + + GC   ID+  LQ KL
Sbjct: 190 MHTIQVE-VNSFGC---IDLLWLQQKL 211

[Close]

BLAST of Lsi09G003270 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-24
Identity = 74/191 (38.74%), Postives = 117/191 (61.26%), Query Frame = 1


Query: 124 PANTRNDNG--DESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISD 183
           P  TR+ +    E  + KK+KK  HR++ERQRRQEM+ L+ SLRS+LPL+Y+KGKR++SD
Sbjct: 7   PKKTRHQSHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSD 66

Query: 184 HVHETVNYIQHMQGRIQQLSDKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKN-GS 243
           HV+  V++I+  Q RI+ LS +RDEL++  G+ T+   +     SS+ +   V  +   S
Sbjct: 67  HVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVS 126

Query: 244 GIEVVIDITTK--QKLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYP 303
           G EVV+       +  P+S  L+ L  +GLE++S  + ++NER ++TI     +    + 
Sbjct: 127 GFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQ----VEVNSFD 186

Query: 304 SIDVSELQHKL 310
             D++ LQ KL
Sbjct: 187 CFDLAWLQQKL 193

[Close]

BLAST of Lsi09G003270 vs. Swiss-Prot
Match: BH125_ARATH (Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.3e-22
Identity = 73/207 (35.27%), Postives = 115/207 (55.56%), Query Frame = 1


Query: 125 ANTRNDNGDESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVH 184
           AN  N N D+    ++ KK  HRD+ERQRRQE+SSL+  LR+ LP +Y++GKRS SDH+ 
Sbjct: 61  ANEANKNDDD----RESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIV 120

Query: 185 ETVNYIQHMQGRIQQLSDKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGS---- 244
           + VNYI+ +Q +I++L++KR+ ++K+    T T S  +   SS   S      +      
Sbjct: 121 QAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVG 180

Query: 245 -------------GIEVVIDITT-KQKLPVSNFLQALADE-GLEILSCNSTKLNERFVHT 304
                        G+E++I     + K  +S+ LQ LA E    ++SC S +  +RF+HT
Sbjct: 181 DKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHT 240

Query: 305 IDCQPIINDGCYPSIDVSELQHKLTNL 313
           I  Q  + DG    I++ EL+ K+  +
Sbjct: 241 IVSQ--VEDG--KQINILELKDKIMTM 259

[Close]

BLAST of Lsi09G003270 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-21
Identity = 66/169 (39.05%), Postives = 106/169 (62.72%), Query Frame = 1


Query: 142 KKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQLS 201
           +K  H+++E++RRQEM+SLY SLRS LPLE+++GKRS SD V   VNYI ++Q  I+ ++
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 202 DKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLPVSNFLQ 261
            KRD+L  LSG +  + +  +    S  + V++R     GIE+V+ I    + P S+ LQ
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEIS--NHVVIRPCL-VGIEIVLSIL---QTPFSSVLQ 121

Query: 262 ALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLT 311
            L + GL +L    + +N+R +HT+  +  +ND     ID+++L+  LT
Sbjct: 122 VLREHGLYVLGYICSSVNDRLIHTLQAE--VND--LALIDLADLKDTLT 160

[Close]

BLAST of Lsi09G003270 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 72/179 (40.22%), Postives = 113/179 (63.13%), Query Frame = 1


Query: 142 KKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQLS 201
           +K  HR+ ERQRRQEM+SLY SLRS LPL ++KGKRS SD V+E VNYI+++Q +I++LS
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 202 DKRDELRKLS------GENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLP 261
            +RD+L  LS        N       +MI  S ++ V+VR +   G+E+++        P
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMI--SGKNHVVVR-QCLVGVEIMLSSRCCGGQP 121

Query: 262 -VSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNLE 314
             S+ LQ L++ GL +L+  S+ +++R V+TI  +  +ND     ID++EL+ +L  ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE--VNDMAL-MIDLAELEKRLIRMK 174

[Close]

BLAST of Lsi09G003270 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.0e-79
Identity = 164/241 (68.05%), Postives = 197/241 (81.74%), Query Frame = 1


Query: 82  NLSLGDDLFPLPSLPSSSMFSPPLDN-DNGVCQKQKNGRRKKPPANTRNDNG-DESLDEK 141
           +  +G+DL PLPSLPSSS+ SPPLDN  N V QK KNGRRKKP  NT ND+G DE+ DE+
Sbjct: 11  SFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGGDENHDEQ 70

Query: 142 KKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQ 201
           KKKK  HRDVERQRRQEMSSLY +LRS LPLEYLKGKRSISDH+ ETV+YIQHMQ RIQQ
Sbjct: 71  KKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQ 130

Query: 202 LSDKRDELRKLSGENTATVS-TAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLPVSN 261
           L DKR  LR+L+ + T  ++ T + +NSS+R S +VRAK+G GI+VV+D  TKQ+LP+S 
Sbjct: 131 LKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSI 190

Query: 262 FLQALADEGLEILSCNSTKLNERFVHTIDCQPIIN-DGCYPSIDVSELQHKLTNLEYFHL 319
           F+QAL  EGLEIL+C S +LNERF+HTI+CQP++N DGCYP+IDVS LQHKL NLEY+ L
Sbjct: 191 FVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLANLEYYPL 250

[Close]

BLAST of Lsi09G003270 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.5e-58
Identity = 139/247 (56.28%), Postives = 179/247 (72.47%), Query Frame = 1


Query: 85  LGDDLFPLPSLPSSS-----MFSPPLDNDNG--VCQKQKNGRRKKP-PANTRNDNGDES- 144
           LGD+L PLPSL          F   L+N+N   V    KN RRKKP PANT +D  DE+ 
Sbjct: 15  LGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDENN 74

Query: 145 LDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQG 204
            +E KKKK  HRDVERQRRQEMSSLY++LRS LP+EYLKGKRSI DH+HETV YI++MQ 
Sbjct: 75  SNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQS 134

Query: 205 RIQQLSDKRDELRKL--SGENTATVSTAKMINSSQRDSVLVRAKNGS-GIEVVIDITTKQ 264
           +IQ+L DKRDEL+KL  + +N   V T + + S++RD V+VRA++GS GI+V++D  T+ 
Sbjct: 135 KIQELCDKRDELKKLQSNNQNPGMVET-ETLQSTKRDKVVVRARDGSGGIQVILDTPTQH 194

Query: 265 KLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQP-IINDGCYPSIDVSELQHKLTN 319
           +L +SN L+AL D+G EILSC+S KLN+RF+HTI+ QP +  D   P ID+S+LQ+ L N
Sbjct: 195 RLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPLIDISDLQYMLAN 254

[Close]

BLAST of Lsi09G003270 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 127/244 (52.05%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 87  DDLFPLPSLPS---SSMFSPPL-----DNDNGVCQKQKNGRRKKPPANTRNDNGDESLD- 146
           D+LFPLPSL     S    PPL     + +  + +K K GRR+K P NT  D  DE+ + 
Sbjct: 16  DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSP-NTSADIEDENPNP 75

Query: 147 -EKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGR 206
            E KKKK  HRDVERQRRQEMS+LY +LRS LP+EYLKGKRSI DH+HETV YIQHMQ +
Sbjct: 76  NEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTK 135

Query: 207 IQQLSDKRDELRK--LSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKL 266
           IQ L +KRDEL+K    GE++  ++T + +NSS+RDSVLV  ++  G+++++D  T  +L
Sbjct: 136 IQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATHHRL 195

Query: 267 PVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNLEY 319
           P+SN ++ L  + L+I+SC+ST+ N+RF+HTI+ +  ++     +ID+SELQ+KLTNLEY
Sbjct: 196 PLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVD---VETIDMSELQNKLTNLEY 255

[Close]

BLAST of Lsi09G003270 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.6e-53
Identity = 127/244 (52.05%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 87  DDLFPLPSLPS---SSMFSPPL-----DNDNGVCQKQKNGRRKKPPANTRNDNGDESLD- 146
           D+LFPLPSL     S    PPL     + +  + +K K GRR+K P NT  D  DE+ + 
Sbjct: 16  DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSP-NTSADIEDENPNP 75

Query: 147 -EKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGR 206
            E KKKK  HRDVERQRRQEMS+LY +LRS LP+EYLKGKRSI DH+HETV YIQHMQ +
Sbjct: 76  NEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTK 135

Query: 207 IQQLSDKRDELRK--LSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKL 266
           IQ L +KRDEL+K    GE++  ++T + +NSS+RDSVLV  ++  G+++++D  T  +L
Sbjct: 136 IQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATHHRL 195

Query: 267 PVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNLEY 319
           P+SN ++ L  + L+I+SC+ST+ N+RF+HTI+ +  ++     +ID+SELQ+KLTNLEY
Sbjct: 196 PLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVD---VETIDMSELQNKLTNLEY 255

[Close]

BLAST of Lsi09G003270 vs. TrEMBL
Match: A0A061G572_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_016134 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 103/227 (45.37%), Postives = 143/227 (63.00%), Query Frame = 1


Query: 88  DLFPLPSLPSSSMFSPPLDNDNGVC--QKQKNGRRKKPPANTRNDNGDESLDEKKKKKKA 147
           +LF   S+P     S P  ++  +    K+ +  R K  A T     D +  + K KK  
Sbjct: 33  ELFQFFSIPCQQDSSNPKQDEQNLILVSKKSDCSRGKRKAATAFGVEDGNAPDSKGKKII 92

Query: 148 HRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQLSDKRD 207
           HRD+ERQRRQEM++LY++LR  LPLEYLKGKRSISDH+HE V YI+H+Q RI +LSDKR+
Sbjct: 93  HRDIERQRRQEMTTLYSTLRLLLPLEYLKGKRSISDHMHEAVKYIKHLQNRITELSDKRE 152

Query: 208 ELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLPVSNFLQALAD 267
           EL++ S  +T + S  +       DSV+VR     G+E+ I+   +  LP+SN L  +  
Sbjct: 153 ELKRSSNLHTPS-SMPESSPDCSEDSVVVRGCM-VGVEIAINTGLRPGLPLSNVLDVIVA 212

Query: 268 EGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNL 313
           EGL +++C STK+NER +HTI  +  +NDG   SI++SELQ KLT L
Sbjct: 213 EGLSVVNCISTKVNERLLHTIVLE--VNDG--RSIELSELQQKLTKL 253

[Close]

BLAST of Lsi09G003270 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.3e-29
Identity = 81/207 (39.13%), Postives = 133/207 (64.25%), Query Frame = 1


Query: 116 KNGRRKKPPANTRNDNGD-------ESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRL 175
           K  +R++P ++     G        E+ D KKKKK  HRD+ERQRRQEM++L+ +LR+ L
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 176 PLEYLKGKRSISDHVHETVNYIQHMQGRIQQLSDKRDELRKLSGE----NTATVSTAKMI 235
           PL+Y+KGKR++SDHV+  VN+I+  + RI++LS +RDEL + +G+    N     T   +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 236 NSSQRDSVLVRAKNGSGIEVVIDITTK--QKLPVSNFLQALADEGLEILSCNSTKLNERF 295
             S+  +V+V+  + SG+EVV+   +   + LP+S  L+ + ++GLE++S  +T++N+R 
Sbjct: 130 GKSEPATVMVQP-HVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRL 189

Query: 296 VHTIDCQPIINDGCYPSIDVSELQHKL 310
           +HTI  + + + GC   ID+  LQ KL
Sbjct: 190 MHTIQVE-VNSFGC---IDLLWLQQKL 211

[Close]

BLAST of Lsi09G003270 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 74/191 (38.74%), Postives = 117/191 (61.26%), Query Frame = 1


Query: 124 PANTRNDNG--DESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISD 183
           P  TR+ +    E  + KK+KK  HR++ERQRRQEM+ L+ SLRS+LPL+Y+KGKR++SD
Sbjct: 7   PKKTRHQSHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSD 66

Query: 184 HVHETVNYIQHMQGRIQQLSDKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKN-GS 243
           HV+  V++I+  Q RI+ LS +RDEL++  G+ T+   +     SS+ +   V  +   S
Sbjct: 67  HVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVS 126

Query: 244 GIEVVIDITTK--QKLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYP 303
           G EVV+       +  P+S  L+ L  +GLE++S  + ++NER ++TI     +    + 
Sbjct: 127 GFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQ----VEVNSFD 186

Query: 304 SIDVSELQHKL 310
             D++ LQ KL
Sbjct: 187 CFDLAWLQQKL 193

[Close]

BLAST of Lsi09G003270 vs. TAIR10
Match: AT1G62975.1 (AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-23
Identity = 73/207 (35.27%), Postives = 115/207 (55.56%), Query Frame = 1


Query: 125 ANTRNDNGDESLDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVH 184
           AN  N N D+    ++ KK  HRD+ERQRRQE+SSL+  LR+ LP +Y++GKRS SDH+ 
Sbjct: 61  ANEANKNDDD----RESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIV 120

Query: 185 ETVNYIQHMQGRIQQLSDKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGS---- 244
           + VNYI+ +Q +I++L++KR+ ++K+    T T S  +   SS   S      +      
Sbjct: 121 QAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVG 180

Query: 245 -------------GIEVVIDITT-KQKLPVSNFLQALADE-GLEILSCNSTKLNERFVHT 304
                        G+E++I     + K  +S+ LQ LA E    ++SC S +  +RF+HT
Sbjct: 181 DKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHT 240

Query: 305 IDCQPIINDGCYPSIDVSELQHKLTNL 313
           I  Q  + DG    I++ EL+ K+  +
Sbjct: 241 IVSQ--VEDG--KQINILELKDKIMTM 259

[Close]

BLAST of Lsi09G003270 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 5.1e-22
Identity = 66/169 (39.05%), Postives = 106/169 (62.72%), Query Frame = 1


Query: 142 KKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQLS 201
           +K  H+++E++RRQEM+SLY SLRS LPLE+++GKRS SD V   VNYI ++Q  I+ ++
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 202 DKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLPVSNFLQ 261
            KRD+L  LSG +  + +  +    S  + V++R     GIE+V+ I    + P S+ LQ
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEIS--NHVVIRPCL-VGIEIVLSIL---QTPFSSVLQ 121

Query: 262 ALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLT 311
            L + GL +L    + +N+R +HT+  +  +ND     ID+++L+  LT
Sbjct: 122 VLREHGLYVLGYICSSVNDRLIHTLQAE--VND--LALIDLADLKDTLT 160

[Close]

BLAST of Lsi09G003270 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 8.7e-22
Identity = 72/179 (40.22%), Postives = 113/179 (63.13%), Query Frame = 1


Query: 142 KKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQLS 201
           +K  HR+ ERQRRQEM+SLY SLRS LPL ++KGKRS SD V+E VNYI+++Q +I++LS
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 202 DKRDELRKLS------GENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLP 261
            +RD+L  LS        N       +MI  S ++ V+VR +   G+E+++        P
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMI--SGKNHVVVR-QCLVGVEIMLSSRCCGGQP 121

Query: 262 -VSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNLE 314
             S+ LQ L++ GL +L+  S+ +++R V+TI  +  +ND     ID++EL+ +L  ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE--VNDMAL-MIDLAELEKRLIRMK 174

[Close]

BLAST of Lsi09G003270 vs. NCBI nr
Match: gi|821595469|ref|NP_001295816.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.5e-79
Identity = 164/241 (68.05%), Postives = 197/241 (81.74%), Query Frame = 1


Query: 82  NLSLGDDLFPLPSLPSSSMFSPPLDN-DNGVCQKQKNGRRKKPPANTRNDNG-DESLDEK 141
           +  +G+DL PLPSLPSSS+ SPPLDN  N V QK KNGRRKKP  NT ND+G DE+ DE+
Sbjct: 11  SFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGGDENHDEQ 70

Query: 142 KKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGRIQQ 201
           KKKK  HRDVERQRRQEMSSLY +LRS LPLEYLKGKRSISDH+ ETV+YIQHMQ RIQQ
Sbjct: 71  KKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQ 130

Query: 202 LSDKRDELRKLSGENTATVS-TAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKLPVSN 261
           L DKR  LR+L+ + T  ++ T + +NSS+R S +VRAK+G GI+VV+D  TKQ+LP+S 
Sbjct: 131 LKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSI 190

Query: 262 FLQALADEGLEILSCNSTKLNERFVHTIDCQPIIN-DGCYPSIDVSELQHKLTNLEYFHL 319
           F+QAL  EGLEIL+C S +LNERF+HTI+CQP++N DGCYP+IDVS LQHKL NLEY+ L
Sbjct: 191 FVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTIDVSVLQHKLANLEYYPL 250

[Close]

BLAST of Lsi09G003270 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 5.1e-72
Identity = 153/248 (61.69%), Postives = 189/248 (76.21%), Query Frame = 1


Query: 82  NLSLGDDLFPLPSLPSSS-----MFSPPLDNDNG----VCQKQKNGRRKKPPANTRNDNG 141
           +  LGD+L PLPSL          F   L+N+N     V  + KNGRRKKPPANT +D  
Sbjct: 11  SFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKD 70

Query: 142 DES-LDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQ 201
           DE+  +E KKKK  HRDVERQRRQEMSSLY++LRS LP+EYLKGKRSISDH+ ETV+YIQ
Sbjct: 71  DENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSISDHMQETVSYIQ 130

Query: 202 HMQGRIQQLSDKRDELRKLSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTK 261
           HMQ RIQQL DKRD+LR+L+ +    + T + +NSS+RDSV+VRAK+G GI+VV+D  TK
Sbjct: 131 HMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQVVLDTATK 190

Query: 262 QKLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPII-NDGCYPSIDVSELQHKLT 319
            +LP+S F+QAL  EGLEIL+C S +LNERF+HTI+CQ I+ +DGCYP+ID S LQHKL 
Sbjct: 191 HRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDASMLQHKLA 250

[Close]

BLAST of Lsi09G003270 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 3.6e-62
Identity = 141/249 (56.63%), Postives = 179/249 (71.89%), Query Frame = 1


Query: 82  NLSLGDDLFPLPSLPSSS-----MFSPPLDNDNG----VCQKQKNGRRKKPPANTRNDNG 141
           +  LGD+L PLPSL          F   L+N+N     V  + KNGRRKKPPANT +D  
Sbjct: 11  SFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKD 70

Query: 142 DES-LDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQ 201
           DE+  +E KKKK  HRDVERQRRQEMSSLY++LRS LP+EYLKGKRSI DH+HETV YI+
Sbjct: 71  DENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIR 130

Query: 202 HMQGRIQQLSDKRDELRKLSGEN-TATVSTAKMINSSQRDSVLVRAKNGS-GIEVVIDIT 261
           +MQ +IQ+L DKRDEL+KL   N    +   + + S++RD V+VRA++GS GI+V++D  
Sbjct: 131 YMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGSGGIQVILDTA 190

Query: 262 TKQKLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKL 319
           T+ +LP+SN L AL D+GLEILSC+S KLN+RF+HTI+ QP+      P IDVS LQ+ L
Sbjct: 191 TRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNSPIIDVSGLQYTL 250

[Close]

BLAST of Lsi09G003270 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 9.3e-58
Identity = 139/247 (56.28%), Postives = 179/247 (72.47%), Query Frame = 1


Query: 85  LGDDLFPLPSLPSSS-----MFSPPLDNDNG--VCQKQKNGRRKKP-PANTRNDNGDES- 144
           LGD+L PLPSL          F   L+N+N   V    KN RRKKP PANT +D  DE+ 
Sbjct: 15  LGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDENN 74

Query: 145 LDEKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQG 204
            +E KKKK  HRDVERQRRQEMSSLY++LRS LP+EYLKGKRSI DH+HETV YI++MQ 
Sbjct: 75  SNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQS 134

Query: 205 RIQQLSDKRDELRKL--SGENTATVSTAKMINSSQRDSVLVRAKNGS-GIEVVIDITTKQ 264
           +IQ+L DKRDEL+KL  + +N   V T + + S++RD V+VRA++GS GI+V++D  T+ 
Sbjct: 135 KIQELCDKRDELKKLQSNNQNPGMVET-ETLQSTKRDKVVVRARDGSGGIQVILDTPTQH 194

Query: 265 KLPVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQP-IINDGCYPSIDVSELQHKLTN 319
           +L +SN L+AL D+G EILSC+S KLN+RF+HTI+ QP +  D   P ID+S+LQ+ L N
Sbjct: 195 RLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPLIDISDLQYMLAN 254

[Close]

BLAST of Lsi09G003270 vs. NCBI nr
Match: gi|821595271|ref|NP_001295841.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 127/244 (52.05%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 87  DDLFPLPSLPS---SSMFSPPL-----DNDNGVCQKQKNGRRKKPPANTRNDNGDESLD- 146
           D+LFPLPSL     S    PPL     + +  + +K K GRR+K P NT  D  DE+ + 
Sbjct: 16  DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSP-NTSADIEDENPNP 75

Query: 147 -EKKKKKKAHRDVERQRRQEMSSLYNSLRSRLPLEYLKGKRSISDHVHETVNYIQHMQGR 206
            E KKKK  HRDVERQRRQEMS+LY +LRS LP+EYLKGKRSI DH+HETV YIQHMQ +
Sbjct: 76  NEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTK 135

Query: 207 IQQLSDKRDELRK--LSGENTATVSTAKMINSSQRDSVLVRAKNGSGIEVVIDITTKQKL 266
           IQ L +KRDEL+K    GE++  ++T + +NSS+RDSVLV  ++  G+++++D  T  +L
Sbjct: 136 IQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATHHRL 195

Query: 267 PVSNFLQALADEGLEILSCNSTKLNERFVHTIDCQPIINDGCYPSIDVSELQHKLTNLEY 319
           P+SN ++ L  + L+I+SC+ST+ N+RF+HTI+ +  ++     +ID+SELQ+KLTNLEY
Sbjct: 196 PLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVD---VETIDMSELQNKLTNLEY 255

The following BLAST results are available for this feature:

BLAST of Lsi09G003270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH126_ARATH	5.9e-28	39.13	Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1	[more]
BH120_ARATH	2.3e-24	38.74	Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2	[more]
BH125_ARATH	6.3e-22	35.27	Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1	[more]
BH118_ARATH	9.1e-21	39.05	Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1	[more]
BH036_ARATH	1.5e-20	40.22	Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1	[more]

BLAST of Lsi09G003270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A097IYN6_CUCSA	1.0e-79	68.05	BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1	[more]
A0A0A0KKN9_CUCSA	6.5e-58	56.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1	[more]
A0A097IYP0_CUCSA	1.3e-53	52.05	BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1	[more]
A0A0A0KMQ4_CUCSA	1.6e-53	52.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1	[more]
A0A061G572_THECC	1.2e-35	45.37	Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca...	[more]

BLAST of Lsi09G003270 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25410.1	3.3e-29	39.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	1.3e-25	38.74	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	3.5e-23	35.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	5.1e-22	39.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	8.7e-22	40.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Lsi09G003270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|821595469\|ref\|NP_001295816.1\|	1.5e-79	68.05	transcription factor bHLH118-like [Cucumis sativus]	[more]
gi\|659073660\|ref\|XP_008437183.1\|	5.1e-72	61.69	PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo]	[more]
gi\|659073658\|ref\|XP_008437182.1\|	3.6e-62	56.63	PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo]	[more]
gi\|449459720\|ref\|XP_004147594.1\|	9.3e-58	56.28	PREDICTED: transcription factor bHLH36-like [Cucumis sativus]	[more]
gi\|821595271\|ref\|NP_001295841.1\|	1.8e-53	52.05	transcription factor bHLH118-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015660	MASH1/Ascl1a-like
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G003270.1	Lsi09G003270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 142..209 score: 4.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 142..194 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 147..199 score: 7.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 141..193 score: 12
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 140..215 score: 2.36
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 107..311 score: 4.8
None	No IPR available	unknown	Coil	Coil	coord: 190..210 scor
None	No IPR available	PANTHER	PTHR13935:SF54	TRANSCRIPTION FACTOR BHLH118-RELATED	coord: 107..311 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G003270	Cla006230	Watermelon (97103) v1	lsiwmB024
Lsi09G003270	ClCG05G007640	Watermelon (Charleston Gray)	lsiwcgB023

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G003270	Cucumber (Chinese Long) v3	cuclsiB171
Lsi09G003270	Cucumber (Chinese Long) v3	cuclsiB345
Lsi09G003270	Watermelon (97103) v2	lsiwmbB007
Lsi09G003270	Wax gourd	lsiwgoB010
Lsi09G003270	Bottle gourd (USVL1VR-Ls)	lsilsiB008
Lsi09G003270	Cucumber (Gy14) v1	cgylsiB411
Lsi09G003270	Cucumber (Gy14) v1	cgylsiB487
Lsi09G003270	Cucurbita maxima (Rimu)	cmalsiB267
Lsi09G003270	Cucurbita maxima (Rimu)	cmalsiB365
Lsi09G003270	Cucurbita maxima (Rimu)	cmalsiB530
Lsi09G003270	Cucurbita moschata (Rifu)	cmolsiB255
Lsi09G003270	Cucurbita moschata (Rifu)	cmolsiB353
Lsi09G003270	Cucurbita moschata (Rifu)	cmolsiB516
Lsi09G003270	Cucurbita pepo (Zucchini)	cpelsiB131
Lsi09G003270	Cucurbita pepo (Zucchini)	cpelsiB582
Lsi09G003270	Wild cucumber (PI 183967)	cpilsiB155
Lsi09G003270	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G003270	Cucumber (Chinese Long) v2	culsiB156
Lsi09G003270	Cucumber (Chinese Long) v2	culsiB322
Lsi09G003270	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G003270	Melon (DHL92) v3.5.1	lsimeB036
Lsi09G003270	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G003270	Watermelon (97103) v1	lsiwmB027
Lsi09G003270	Cucumber (Gy14) v2	cgyblsiB141
Lsi09G003270	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G003270	Melon (DHL92) v3.6.1	lsimedB012
Lsi09G003270	Melon (DHL92) v3.6.1	lsimedB036
Lsi09G003270	Silver-seed gourd	carlsiB836
Lsi09G003270	Silver-seed gourd	carlsiB851