Lsi09G002620 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G002620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Tubulin beta chain, putative
Location	chr09 : 2736737 .. 2739688 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGACAGGTAGGCATGAAGATAAGTGGATTGGATTAATTGGTCATTTAAGTTATGAATAAAGACACAAGAACTAGCACTCTCCTCTTCTTGTCACCTTCCTTGTCATCCAGCTCACACAACTCCAATTTGGAATTTGACAGGTCTCTCTTCACTCATACATTCCCACATGAAATTATTAATTGAATCTTCTTCCATGTCTTTGATTCTTCAGTTTCACTATCCTTTTCCACCATTATTTCTTCAAGATAAAGAGTAGAAAACCCATTTCATTTCGTTCCAAACAAAGCTCCTTATATATGCCTCTTCCCATTCATCTGTGTAAACTCAGAAAGCATCTGTTTTTTTCCATCTTCAGAAGCTTGATCAGAATACCCATTAACCATTTCCTTTCAAAGATCATATTTCTTACAGATTTTGTTGAAATTTCCTTCTGAAAAATGAGAGAAATCCTCCATATTCAAGCAGGACAGTGTGGAAACCAAATTGGGGCTAAATTTTGGGAAGTTGTTTGTGATGAACATGGGATCGATCCCACTGGAAATTACACAGGAAGTAGTAACCTTCAACTCGAGAGAGTTAATGTTTACTACAACGAAGCGAGTGGTGGCCGATATGTTCCAAGGGCTGTTTTGGTTGACCTTGAACCAGGAACCATGGACAGCCTCAGGACAGGTCCTTATGGGAATATATTTAGACCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAGGGCCATTACACTGAAGGAGCTGAACTGGTTGATTCTGTTCTTGATGTGGTTCGCAAAGAAGCTGAGAATTGTGACTGTTTACAAGGTATGACTGAGATTTTTCTTTAATGTTCTTCATTTCTGGGGCCATTTGAATAGGAAGAAGTTAACAAATGCTCCTTAGAGAATGAAAGAACTTTGTTTGGTGTATTGAGATGAATCGAAATTATTGTGAATGTGGATTGATTCTATAATCTAAAGCTGAAAAGTAGGTGGTGTTCTATTGTAGTTTAACATTAACTTATCAATACATATAATGATGGTCAATTAAACAGACTCTTATATTTGTGAATAGAAGTGTTTAACACAAAGGTTTAACTCTAATCTTGGTTTGAATGTATGGTTGTGTGAGACAGGGTTTCAAGTTTGCCATTCACTTGGAGGAGGGACTGGATCTGGAATGGGAACATTATTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTCTTCCCCTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTTGAAAATGCTGATGAATGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGGACCCTCAAGCTCACCAATCCAAGTTGTAAGTCTCTTTCTCAATATCACATTCTTGTCTAAGTTATACTGCTAGAAATTTCATCCTCTCACCACGGTGTGAGTTTTTAGCGTCAAGAATGTGTATAAGAAATTAAATATACTTATAAGTTTATCGAACTTAAGCTTTAGAATCTAAAGATGATAGTGCTGGGACATAAAATTTTGTGTTTAAACGGCTCCAATGTCGTTTGAGATTGATAATAAACTGTAGGATCTCAAGGTAATTTTCGGACCGACAGTAAGAGAGTATTAAGAATATATGTAAAACTTAAAAGATTAAGTATATCTTCACCAGTTAGATCAAGTCTTTGGATTTATAGTCAACTTAATACTTAAAATGGATCGTTCAACTCTTTGGTATCTTGTGTGGTTACACACCAAGAGAACCAACTCTTAAATCAGCAAGTTGGTTTCTGGCTGTGGGAATTCTGGCAGAACATGTTGTGTAGCATTCTACTTGAGATGTAATGGTTGTTTATTTGGATTTTTGTGTGTTTCAGTTGGTGATCTCAACCACTTGATTTCAACAACCATGAGTGGAGTAACATGCTGCCTTCGCTTCCCCGGCCAGCTCAACTCCGACCTCCGAAAGCTAGCTGTGAACCTCATCCCTTTCCCGCGCCTCCACTTCTTCATGGTTGGTTTTGCGCCCTTGACTGCTCGTGGCTCACAGCAGTACCGTGCACTCACCATCCCGGAGCTCACCCAGCAAATGTGGGATGCCAAAAATATGATGTGCGCTGCTGATCCTCGCCATGGTCGATACCTAACTGCCTCAGCTTTGTTCCGTGGCAAGATGAGCACCAAGGAAGTCGACGAACAAATGATAAATGTACAGAACAAGAACTCATCCTATTTTGTTGAGTGGATTCCAAACAATGTTAAATCAAGTGTTTGTGACATCCCTCCAACTGGGTTGTCAATGTCTTCGACATTCATGGGAAACTCGACCTCAATACAAGAGATGTTCCGGCGAGTTTCTGAACAATTCACGGTCATGTTCAGGAGGAAGGCATTTTTGCATTGGTACACAGGGGAGGGAATGGATGAGATGGAGTTCACAGAGGCCGAGAGTAATATGAATGATTTGGTATCAGAGTACCAACAGTATCAAGATGCTGTGGCAGAGGATGAGGAGGAGGAGGAAGAGGATATGTTGGAGCGCTAATAGCCAACAAGGAAAACTGAAGATGTATCCTGCTGAATCTCTGTTTGAGTTGCCAAGTATATATGGGCTTTGGAGTGAATAAGTTTCTTGTTTGATGAGATGGGTTTGGGTGTATTGATGTTCAAAATTTGTTGTTGCATTAAATTATTGATATATGGGATGTGTTCTGTAAGTATGATGAAAGGTTGAGTTGAATGAAATGTTTGAGATTCCTTGCAGTAATCAGTTTCTGTAAAATATATTTGCCAAAACATTTTAATGATAAATTCTGGTTATAATTTCAGTATGTATGGGGGAACCTCTTTGGGAGGGGAAGCCCTCTTCCCCAAGCCCTAGGTCGTTCTTTTTTTTTTTTGTT

mRNA sequence

TAGACAGGTAGGCATGAAGATAAGTGGATTGGATTAATTGGTCATTTAAGTTATGAATAAAGACACAAGAACTAGCACTCTCCTCTTCTTGTCACCTTCCTTGTCATCCAGCTCACACAACTCCAATTTGGAATTTGACAGGTCTCTCTTCACTCATACATTCCCACATGAAATTATTAATTGAATCTTCTTCCATGTCTTTGATTCTTCAGTTTCACTATCCTTTTCCACCATTATTTCTTCAAGATAAAGAGTAGAAAACCCATTTCATTTCGTTCCAAACAAAGCTCCTTATATATGCCTCTTCCCATTCATCTGTGTAAACTCAGAAAGCATCTGTTTTTTTCCATCTTCAGAAGCTTGATCAGAATACCCATTAACCATTTCCTTTCAAAGATCATATTTCTTACAGATTTTGTTGAAATTTCCTTCTGAAAAATGAGAGAAATCCTCCATATTCAAGCAGGACAGTGTGGAAACCAAATTGGGGCTAAATTTTGGGAAGTTGTTTGTGATGAACATGGGATCGATCCCACTGGAAATTACACAGGAAGTAGTAACCTTCAACTCGAGAGAGTTAATGTTTACTACAACGAAGCGAGTGGTGGCCGATATGTTCCAAGGGCTGTTTTGGTTGACCTTGAACCAGGAACCATGGACAGCCTCAGGACAGGTCCTTATGGGAATATATTTAGACCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAGGGCCATTACACTGAAGGAGCTGAACTGGTTGATTCTGTTCTTGATGTGGTTCGCAAAGAAGCTGAGAATTGTGACTGTTTACAAGGGTTTCAAGTTTGCCATTCACTTGGAGGAGGGACTGGATCTGGAATGGGAACATTATTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTCTTCCCCTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTTGAAAATGCTGATGAATGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGGACCCTCAAGCTCACCAATCCAAGTTTTGGTGATCTCAACCACTTGATTTCAACAACCATGAGTGGAGTAACATGCTGCCTTCGCTTCCCCGGCCAGCTCAACTCCGACCTCCGAAAGCTAGCTGTGAACCTCATCCCTTTCCCGCGCCTCCACTTCTTCATGGTTGGTTTTGCGCCCTTGACTGCTCGTGGCTCACAGCAGTACCGTGCACTCACCATCCCGGAGCTCACCCAGCAAATGTGGGATGCCAAAAATATGATGTGCGCTGCTGATCCTCGCCATGGTCGATACCTAACTGCCTCAGCTTTGTTCCGTGGCAAGATGAGCACCAAGGAAGTCGACGAACAAATGATAAATGTACAGAACAAGAACTCATCCTATTTTGTTGAGTGGATTCCAAACAATGTTAAATCAAGTGTTTGTGACATCCCTCCAACTGGGTTGTCAATGTCTTCGACATTCATGGGAAACTCGACCTCAATACAAGAGATGTTCCGGCGAGTTTCTGAACAATTCACGGTCATGTTCAGGAGGAAGGCATTTTTGCATTGGTACACAGGGGAGGGAATGGATGAGATGGAGTTCACAGAGGCCGAGAGTAATATGAATGATTTGGTATCAGAGTACCAACAGTATCAAGATGCTGTGGCAGAGGATGAGGAGGAGGAGGAAGAGGATATGTTGGAGCGCTAATAGCCAACAAGGAAAACTGAAGATGTATCCTGCTGAATCTCTGTTTGAGTTGCCAAGTATATATGGGCTTTGGAGTGAATAAGTTTCTTGTTTGATGAGATGGGTTTGGGTGTATTGATGTTCAAAATTTGTTGTTGCATTAAATTATTGATATATGGGATGTGTTCTGTAAGTATGATGAAAGGTTGAGTTGAATGAAATGTTTGAGATTCCTTGCAGTAATCAGTTTCTGTAAAATATATTTGCCAAAACATTTTAATGATAAATTCTGGTTATAATTTCAGTATGTATGGGGGAACCTCTTTGGGAGGGGAAGCCCTCTTCCCCAAGCCCTAGGTCGTTCTTTTTTTTTTTTGTT

Coding sequence (CDS)

ATGAGAGAAATCCTCCATATTCAAGCAGGACAGTGTGGAAACCAAATTGGGGCTAAATTTTGGGAAGTTGTTTGTGATGAACATGGGATCGATCCCACTGGAAATTACACAGGAAGTAGTAACCTTCAACTCGAGAGAGTTAATGTTTACTACAACGAAGCGAGTGGTGGCCGATATGTTCCAAGGGCTGTTTTGGTTGACCTTGAACCAGGAACCATGGACAGCCTCAGGACAGGTCCTTATGGGAATATATTTAGACCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAGGGCCATTACACTGAAGGAGCTGAACTGGTTGATTCTGTTCTTGATGTGGTTCGCAAAGAAGCTGAGAATTGTGACTGTTTACAAGGGTTTCAAGTTTGCCATTCACTTGGAGGAGGGACTGGATCTGGAATGGGAACATTATTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTCTTCCCCTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTTGAAAATGCTGATGAATGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGGACCCTCAAGCTCACCAATCCAAGTTTTGGTGATCTCAACCACTTGATTTCAACAACCATGAGTGGAGTAACATGCTGCCTTCGCTTCCCCGGCCAGCTCAACTCCGACCTCCGAAAGCTAGCTGTGAACCTCATCCCTTTCCCGCGCCTCCACTTCTTCATGGTTGGTTTTGCGCCCTTGACTGCTCGTGGCTCACAGCAGTACCGTGCACTCACCATCCCGGAGCTCACCCAGCAAATGTGGGATGCCAAAAATATGATGTGCGCTGCTGATCCTCGCCATGGTCGATACCTAACTGCCTCAGCTTTGTTCCGTGGCAAGATGAGCACCAAGGAAGTCGACGAACAAATGATAAATGTACAGAACAAGAACTCATCCTATTTTGTTGAGTGGATTCCAAACAATGTTAAATCAAGTGTTTGTGACATCCCTCCAACTGGGTTGTCAATGTCTTCGACATTCATGGGAAACTCGACCTCAATACAAGAGATGTTCCGGCGAGTTTCTGAACAATTCACGGTCATGTTCAGGAGGAAGGCATTTTTGCATTGGTACACAGGGGAGGGAATGGATGAGATGGAGTTCACAGAGGCCGAGAGTAATATGAATGATTTGGTATCAGAGTACCAACAGTATCAAGATGCTGTGGCAGAGGATGAGGAGGAGGAGGAAGAGGATATGTTGGAGCGCTAA

Protein sequence

MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYVPRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMMCAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAVAEDEEEEEEDMLER

Homology

[Close]

BLAST of Lsi09G002620 vs. Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 1.3e-248
Identity = 413/442 (93.44%), Postives = 431/442 (97.51%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEEDMLE 443
           EYQQYQDA A++EE E+E+ ++
Sbjct: 421 EYQQYQDATADEEEYEDEEEVQ 442

[Close]

BLAST of Lsi09G002620 vs. Swiss-Prot
Match: TBB_HORVU (Tubulin beta chain OS=Hordeum vulgare GN=TUBB PE=2 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 1.8e-248
Identity = 413/439 (94.08%), Postives = 429/439 (97.72%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEED 440
           EYQQYQDA A++E E E++
Sbjct: 421 EYQQYQDATADEEGEYEDE 439

[Close]

BLAST of Lsi09G002620 vs. Swiss-Prot
Match: TBB2_WHEAT (Tubulin beta-2 chain OS=Triticum aestivum GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 6.7e-248
Identity = 412/439 (93.85%), Postives = 429/439 (97.72%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEED 440
           EYQQYQDA +++E E E++
Sbjct: 421 EYQQYQDATSDEEGEYEDE 439

[Close]

BLAST of Lsi09G002620 vs. Swiss-Prot
Match: TBB4_ORYSJ (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 8.7e-248
Identity = 412/439 (93.85%), Postives = 428/439 (97.49%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEED 440
           EYQQYQDA A++E E E++
Sbjct: 421 EYQQYQDATADEEGEYEDE 439

[Close]

BLAST of Lsi09G002620 vs. Swiss-Prot
Match: TBB2_ELEIN (Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 1.1e-247
Identity = 411/440 (93.41%), Postives = 429/440 (97.50%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEEDM 441
           EYQQYQDA A+++ E E+++
Sbjct: 421 EYQQYQDATADEDGEYEDEL 440

[Close]

BLAST of Lsi09G002620 vs. TrEMBL
Match: A0A0A0KQW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153160 PE=3 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 6.5e-258
Identity = 437/441 (99.09%), Postives = 439/441 (99.55%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEEDML 442
           EYQQYQDAVAEDEEE EED+L
Sbjct: 421 EYQQYQDAVAEDEEEVEEDVL 441

[Close]

BLAST of Lsi09G002620 vs. TrEMBL
Match: B9RCB7_RICCO (Tubulin beta chain, putative OS=Ricinus communis GN=RCOM_1686680 PE=3 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 3.1e-252
Identity = 423/439 (96.36%), Postives = 434/439 (98.86%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDPTGNY G+S++QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNFVFGQNGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEED 440
           EYQQYQDA AE +E+E+ED
Sbjct: 421 EYQQYQDAGAEHDEDEDED 439

[Close]

BLAST of Lsi09G002620 vs. TrEMBL
Match: B9GWI1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s12690g PE=3 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 1.2e-251
Identity = 423/443 (95.49%), Postives = 438/443 (98.87%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDPTGNYTG+S++QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNFVFGQNGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAE-DEEEEEEDMLE 443
           EYQQYQDA A+ D+E +EE+++E
Sbjct: 421 EYQQYQDAAADNDDEYDEEEIVE 443

[Close]

BLAST of Lsi09G002620 vs. TrEMBL
Match: A0A067JRI7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20594 PE=3 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 2.6e-251
Identity = 423/442 (95.70%), Postives = 431/442 (97.51%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDP GNY G S +QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPAGNYIGKSQVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGP+G IFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEEDMLE 443
           EYQQYQDA  + EEEE+E+  E
Sbjct: 421 EYQQYQDAAVDHEEEEDEEAFE 442

[Close]

BLAST of Lsi09G002620 vs. TrEMBL
Match: M4PS87_CHOAR (Beta-tubulin 10 OS=Chosenia arbutifolia PE=2 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 2.6e-251
Identity = 423/443 (95.49%), Postives = 437/443 (98.65%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDPTGNY+G+S++QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYSGNSHVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNFVFGQNGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAE-DEEEEEEDMLE 443
           EYQQYQDA A+ DEE +EE+ L+
Sbjct: 421 EYQQYQDAAADNDEEYDEEEALD 443

[Close]

BLAST of Lsi09G002620 vs. TAIR10
Match: AT5G12250.1 (AT5G12250.1 beta-6 tubulin)

HSP 1 Score: 854.0 bits (2205), Expect = 4.2e-248
Identity = 410/439 (93.39%), Postives = 426/439 (97.04%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIG+KFWEVVCDEHGIDPTG Y G+S+LQLERVNVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRA+L+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEED 440
           EYQQYQDA A+DE E EED
Sbjct: 421 EYQQYQDATADDEGEYEED 439

[Close]

BLAST of Lsi09G002620 vs. TAIR10
Match: AT5G62700.1 (AT5G62700.1 tubulin beta chain 3)

HSP 1 Score: 847.0 bits (2187), Expect = 5.1e-246
Identity = 407/441 (92.29%), Postives = 426/441 (96.60%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVC EHGIDPTG YTG S+LQLER+NVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLR+GPYG  FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYR+LT+PELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDE---EEEEE 439
           EYQQYQDA A++E   E+EEE
Sbjct: 421 EYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Lsi09G002620 vs. TAIR10
Match: AT5G62690.1 (AT5G62690.1 tubulin beta chain 2)

HSP 1 Score: 847.0 bits (2187), Expect = 5.1e-246
Identity = 407/441 (92.29%), Postives = 426/441 (96.60%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVC EHGIDPTG YTG S+LQLER+NVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLR+GPYG  FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYR+LT+PELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDE---EEEEE 439
           EYQQYQDA A++E   E+EEE
Sbjct: 421 EYQQYQDATADEEGDYEDEEE 441

[Close]

BLAST of Lsi09G002620 vs. TAIR10
Match: AT5G23860.1 (AT5G23860.1 tubulin beta 8)

HSP 1 Score: 846.7 bits (2186), Expect = 6.7e-246
Identity = 410/444 (92.34%), Postives = 427/444 (96.17%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVC EHGID TG Y G ++LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+R+GPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEE--EEEEDMLE 443
           EYQQYQDA A++EE  E EED +E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDEVE 444

[Close]

BLAST of Lsi09G002620 vs. TAIR10
Match: AT1G75780.1 (AT1G75780.1 tubulin beta-1 chain)

HSP 1 Score: 840.1 bits (2169), Expect = 6.2e-244
Identity = 399/440 (90.68%), Postives = 427/440 (97.05%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTG-SSNLQLERVNVYYNEASGGRY 60
           MREILH+Q GQCGNQIG+KFWEV+CDEHG+DPTG Y G S++LQLER+NVYYNEASGGRY
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 61  VPRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDV 120
           VPRAVL+DLEPGTMDS+R+GPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCC 240
           VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ PSFGDLNHLIS TMSGVTC 
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240

Query: 241 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNM 300
           LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQY +LT+PELTQQMWDAKNM
Sbjct: 241 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNM 300

Query: 301 MCAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPT 360
           MCAADPRHGRYLTASA+FRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPPT
Sbjct: 301 MCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT 360

Query: 361 GLSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 420
           G+ M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 361 GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 420

Query: 421 SEYQQYQDAVAEDEEEEEED 440
           SEYQQYQDA A++E+E +E+
Sbjct: 421 SEYQQYQDATADEEDEYDEE 440

[Close]

BLAST of Lsi09G002620 vs. NCBI nr
Match: gi|778699626|ref|XP_004143909.2| (PREDICTED: tubulin beta chain-like [Cucumis sativus])

HSP 1 Score: 897.5 bits (2318), Expect = 9.3e-258
Identity = 437/441 (99.09%), Postives = 439/441 (99.55%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEEDML 442
           EYQQYQDAVAEDEEE EED+L
Sbjct: 421 EYQQYQDAVAEDEEEVEEDVL 441

[Close]

BLAST of Lsi09G002620 vs. NCBI nr
Match: gi|659073817|ref|XP_008437269.1| (PREDICTED: tubulin beta chain-like [Cucumis melo])

HSP 1 Score: 897.5 bits (2318), Expect = 9.3e-258
Identity = 437/441 (99.09%), Postives = 439/441 (99.55%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEEDML 442
           EYQQYQDAVAEDEEE EED+L
Sbjct: 421 EYQQYQDAVAEDEEEGEEDVL 441

[Close]

BLAST of Lsi09G002620 vs. NCBI nr
Match: gi|255537469|ref|XP_002509801.1| (PREDICTED: tubulin beta chain [Ricinus communis])

HSP 1 Score: 878.6 bits (2269), Expect = 4.5e-252
Identity = 423/439 (96.36%), Postives = 434/439 (98.86%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDPTGNY G+S++QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNFVFGQNGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEEEED 440
           EYQQYQDA AE +E+E+ED
Sbjct: 421 EYQQYQDAGAEHDEDEDED 439

[Close]

BLAST of Lsi09G002620 vs. NCBI nr
Match: gi|224074921|ref|XP_002304492.1| (hypothetical protein POPTR_0003s12690g [Populus trichocarpa])

HSP 1 Score: 876.7 bits (2264), Expect = 1.7e-251
Identity = 423/443 (95.49%), Postives = 438/443 (98.87%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDPTGNYTG+S++QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNFVFGQNGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAE-DEEEEEEDMLE 443
           EYQQYQDA A+ D+E +EE+++E
Sbjct: 421 EYQQYQDAAADNDDEYDEEEIVE 443

[Close]

BLAST of Lsi09G002620 vs. NCBI nr
Match: gi|460240224|gb|AGH08228.1| (beta-tubulin 10 [Salix arbutifolia])

HSP 1 Score: 875.5 bits (2261), Expect = 3.8e-251
Identity = 423/443 (95.49%), Postives = 437/443 (98.65%), Query Frame = 1


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIG KFWEVVCDEHGIDPTGNY+G+S++QLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYSGNSHVQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLRTGPYG IFRPDNFVFGQNGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALTIPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LAMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAE-DEEEEEEDMLE 443
           EYQQYQDA A+ DEE +EE+ L+
Sbjct: 421 EYQQYQDAAADNDEEYDEEEALD 443

The following BLAST results are available for this feature:

BLAST of Lsi09G002620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TBB6_MAIZE	1.3e-248	93.44	Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1	[more]
TBB_HORVU	1.8e-248	94.08	Tubulin beta chain OS=Hordeum vulgare GN=TUBB PE=2 SV=1	[more]
TBB2_WHEAT	6.7e-248	93.85	Tubulin beta-2 chain OS=Triticum aestivum GN=TUBB2 PE=2 SV=1	[more]
TBB4_ORYSJ	8.7e-248	93.85	Tubulin beta-4 chain OS=Oryza sativa subsp. japonica GN=TUBB4 PE=2 SV=1	[more]
TBB2_ELEIN	1.1e-247	93.41	Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1	[more]

BLAST of Lsi09G002620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQW7_CUCSA	6.5e-258	99.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153160 PE=3 SV=1	[more]
B9RCB7_RICCO	3.1e-252	96.36	Tubulin beta chain, putative OS=Ricinus communis GN=RCOM_1686680 PE=3 SV=1	[more]
B9GWI1_POPTR	1.2e-251	95.49	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s12690g PE=3 SV=1	[more]
A0A067JRI7_JATCU	2.6e-251	95.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20594 PE=3 SV=1	[more]
M4PS87_CHOAR	2.6e-251	95.49	Beta-tubulin 10 OS=Chosenia arbutifolia PE=2 SV=1	[more]

BLAST of Lsi09G002620 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12250.1	4.2e-248	93.39	beta-6 tubulin	[more]
AT5G62700.1	5.1e-246	92.29	tubulin beta chain 3	[more]
AT5G62690.1	5.1e-246	92.29	tubulin beta chain 2	[more]
AT5G23860.1	6.7e-246	92.34	tubulin beta 8	[more]
AT1G75780.1	6.2e-244	90.68	tubulin beta-1 chain	[more]

BLAST of Lsi09G002620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699626\|ref\|XP_004143909.2\|	9.3e-258	99.09	PREDICTED: tubulin beta chain-like [Cucumis sativus]	[more]
gi\|659073817\|ref\|XP_008437269.1\|	9.3e-258	99.09	PREDICTED: tubulin beta chain-like [Cucumis melo]	[more]
gi\|255537469\|ref\|XP_002509801.1\|	4.5e-252	96.36	PREDICTED: tubulin beta chain [Ricinus communis]	[more]
gi\|224074921\|ref\|XP_002304492.1\|	1.7e-251	95.49	hypothetical protein POPTR_0003s12690g [Populus trichocarpa]	[more]
gi\|460240224\|gb\|AGH08228.1\|	3.8e-251	95.49	beta-tubulin 10 [Salix arbutifolia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0005200	structural constituent of cytoskeleton

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Vocabulary: **INTERPRO**
Term	Definition
IPR023123	Tubulin_C
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR017975	Tubulin_CS
IPR013838	Beta-tubulin_BS
IPR008280	Tub_FtsZ_C
IPR003008	Tubulin_FtsZ_GTPase
IPR002453	Beta_tubulin
IPR000217	Tubulin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0051258	protein polymerization
biological_process	GO:0008152	metabolic process
biological_process	GO:0007010	cytoskeleton organization
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
cellular_component	GO:0043234	protein complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G002620.1	Lsi09G002620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 93..104 score: 1.6E-106coord: 151..172 score: 1.6E-106coord: 132..150 score: 1.6E-106coord: 370..398 score: 1.6E-106coord: 51..70 score: 1.6E-106coord: 190..210 score: 1.6E-106coord: 10..30 score: 1.6E-106coord: 106..130 score: 1.6E-106coord: 176..189 score: 1.6E
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 5..442 score:
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 265..281 score: 1.0E-118coord: 311..329 score: 1.0E-118coord: 347..370 score: 1.0E-118coord: 88..99 score: 1.0E-118coord: 245..258 score: 1.0E-118coord: 329..343 score: 1.0E-118coord: 152..164 score: 1.0E-118coord: 230..239 score: 1.0E-118coord: 108..126 score: 1.0E-118coord: 41..58 score: 1.0E-118coord: 212..224 score: 1.0E-118coord: 377..388 score: 1.0E-118coord: 412..430 score: 1.0E
IPR003008	Tubulin/FtsZ, GTPase domain	GENE3D	G3DSA:3.40.50.1440		coord: 1..263 score: 1.4E
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 score: 1.3
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..244 score: 2.5
IPR003008	Tubulin/FtsZ, GTPase domain	unknown	SSF52490	Tubulin nucleotide-binding domain-like	coord: 1..243 score: 3.79E
IPR008280	Tubulin/FtsZ, C-terminal	unknown	SSF55307	Tubulin C-terminal domain-like	coord: 244..428 score: 5.8
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4 scor
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146 scor
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	GENE3D	G3DSA:3.30.1330.20		coord: 264..373 score: 1.9
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 261..381 score: 1.6
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 246..383 score: 5.5
IPR023123	Tubulin, C-terminal	GENE3D	G3DSA:1.10.287.600		coord: 374..428 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 408..435 scor
None	No IPR available	PANTHER	PTHR11588:SF124	SUBFAMILY NOT NAMED	coord: 5..442 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G002620	Csa5G153160	Cucumber (Chinese Long) v2	culsiB322
Lsi09G002620	CSPI05G05440	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G002620	Cucsa.303140	Cucumber (Gy14) v1	cgylsiB487
Lsi09G002620	CmaCh02G014550	Cucurbita maxima (Rimu)	cmalsiB530
Lsi09G002620	CmoCh02G014900	Cucurbita moschata (Rifu)	cmolsiB516
Lsi09G002620	Cla011450	Watermelon (97103) v1	lsiwmB027
Lsi09G002620	MELO3C005673	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G002620	ClCG01G002750	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G002620	MELO3C005673.2	Melon (DHL92) v3.6.1	lsimedB012
Lsi09G002620	Cla97C01G002830	Watermelon (97103) v2	lsiwmbB007
Lsi09G002620	Bhi12G000243	Wax gourd	lsiwgoB022
Lsi09G002620	Cp4.1LG05g03420	Cucurbita pepo (Zucchini)	cpelsiB582
Lsi09G002620	CsGy5G002690	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G002620	Carg02527	Silver-seed gourd	carlsiB836
Lsi09G002620	CsaV3_5G002840	Cucumber (Chinese Long) v3	cuclsiB345

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G002620	Bottle gourd (USVL1VR-Ls)	lsilsiB001
Lsi09G002620	Cucumber (Gy14) v1	cgylsiB213
Lsi09G002620	Cucurbita maxima (Rimu)	cmalsiB267
Lsi09G002620	Cucurbita maxima (Rimu)	cmalsiB340
Lsi09G002620	Cucurbita moschata (Rifu)	cmolsiB255
Lsi09G002620	Cucurbita pepo (Zucchini)	cpelsiB131
Lsi09G002620	Wild cucumber (PI 183967)	cpilsiB408
Lsi09G002620	Cucumber (Chinese Long) v2	culsiB406
Lsi09G002620	Melon (DHL92) v3.5.1	lsimeB019
Lsi09G002620	Watermelon (Charleston Gray)	lsiwcgB027
Lsi09G002620	Cucumber (Gy14) v2	cgyblsiB371
Lsi09G002620	Melon (DHL92) v3.6.1	lsimedB021
Lsi09G002620	Silver-seed gourd	carlsiB851
Lsi09G002620	Cucumber (Chinese Long) v3	cuclsiB429
Lsi09G002620	Watermelon (97103) v2	lsiwmbB025